####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 113 ( 452), selected 113 , name T0586AL285_1 # Molecule2: number of CA atoms 119 ( 953), selected 113 , name T0586.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0586AL285_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 113 10 - 122 1.92 1.92 LCS_AVERAGE: 94.96 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 113 10 - 122 1.92 1.92 LCS_AVERAGE: 94.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 77 11 - 87 0.98 2.83 LCS_AVERAGE: 51.48 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 113 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 10 A 10 70 113 113 3 10 21 32 55 81 105 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT D 11 D 11 77 113 113 20 67 74 81 94 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 12 K 12 77 113 113 21 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT P 13 P 13 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT I 14 I 14 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Y 15 Y 15 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT S 16 S 16 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Q 17 Q 17 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT I 18 I 18 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT S 19 S 19 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT D 20 D 20 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT W 21 W 21 77 113 113 21 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT M 22 M 22 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 23 K 23 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 24 K 24 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Q 25 Q 25 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT M 26 M 26 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT I 27 I 27 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT T 28 T 28 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT G 29 G 29 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 30 E 30 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT W 31 W 31 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 32 K 32 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT G 33 G 33 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 34 E 34 77 113 113 46 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT D 35 D 35 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 36 K 36 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 37 L 37 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT P 38 P 38 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT S 39 S 39 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT V 40 V 40 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT R 41 R 41 77 113 113 24 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 42 E 42 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT M 43 M 43 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT G 44 G 44 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT V 45 V 45 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 46 K 46 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 47 L 47 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 48 A 48 77 113 113 40 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT V 49 V 49 77 113 113 37 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT N 50 N 50 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT P 51 P 51 77 113 113 45 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT N 52 N 52 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT T 53 T 53 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT V 54 V 54 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT S 55 S 55 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT R 56 R 56 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 57 A 57 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Y 58 Y 58 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Q 59 Q 59 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 60 E 60 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 61 L 61 77 113 113 38 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 62 E 62 77 113 113 41 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT R 63 R 63 77 113 113 14 60 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 64 A 64 77 113 113 14 57 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT G 65 G 65 77 113 113 16 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Y 66 Y 66 77 113 113 24 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT I 67 I 67 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Y 68 Y 68 77 113 113 41 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 69 A 69 77 113 113 41 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 70 K 70 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT R 71 R 71 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT G 72 G 72 77 113 113 20 67 74 83 96 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT M 73 M 73 77 113 113 20 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT G 74 G 74 77 113 113 20 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT S 75 S 75 77 113 113 41 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT F 76 F 76 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT V 77 V 77 77 113 113 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT T 78 T 78 77 113 113 41 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT S 79 S 79 77 113 113 3 53 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT D 80 D 80 77 113 113 3 21 67 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 81 K 81 77 113 113 4 26 28 36 54 77 97 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 82 A 82 77 113 113 11 26 28 57 85 102 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 83 L 83 77 113 113 32 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT F 84 F 84 77 113 113 12 26 67 81 96 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT D 85 D 85 77 113 113 12 26 28 75 85 90 107 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Q 86 Q 86 77 113 113 12 32 73 81 96 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 87 L 87 77 113 113 12 29 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 88 K 88 29 113 113 12 26 60 81 86 102 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 89 K 89 29 113 113 11 44 72 81 86 102 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 90 E 90 29 113 113 12 64 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 91 L 91 29 113 113 12 58 72 82 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 92 A 92 29 113 113 16 66 74 81 86 102 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT D 93 D 93 29 113 113 12 60 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 94 A 94 29 113 113 12 26 60 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT I 95 I 95 29 113 113 12 26 36 80 97 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT T 96 T 96 29 113 113 33 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 97 E 97 29 113 113 12 26 60 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT R 98 R 98 29 113 113 12 26 41 77 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT F 99 F 99 29 113 113 12 29 73 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 100 L 100 29 113 113 12 26 68 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 101 E 101 29 113 113 12 26 40 63 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 102 E 102 29 113 113 12 26 28 62 96 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 103 A 103 29 113 113 11 30 63 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 104 K 104 29 113 113 11 26 28 47 84 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT S 105 S 105 29 113 113 11 26 28 40 60 88 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT I 106 I 106 29 113 113 4 25 44 76 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT G 107 G 107 29 113 113 13 26 49 77 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 108 L 108 29 113 113 13 25 49 80 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT D 109 D 109 29 113 113 13 17 29 64 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT D 110 D 110 22 113 113 13 17 25 64 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT Q 111 Q 111 22 113 113 13 17 40 74 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT T 112 T 112 22 113 113 13 25 53 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT A 113 A 113 22 113 113 13 21 49 80 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT I 114 I 114 22 113 113 11 17 25 62 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT E 115 E 115 22 113 113 13 25 58 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 116 L 116 22 113 113 13 30 63 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT L 117 L 117 22 113 113 13 17 24 76 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT I 118 I 118 22 113 113 13 25 52 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT K 119 K 119 22 113 113 11 41 70 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT R 120 R 120 22 113 113 11 17 22 40 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT S 121 S 121 22 113 113 13 17 22 35 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_GDT R 122 R 122 22 113 113 13 17 44 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 LCS_AVERAGE LCS_A: 80.47 ( 51.48 94.96 94.96 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 47 67 74 84 98 104 109 113 113 113 113 113 113 113 113 113 113 113 113 113 GDT PERCENT_AT 39.50 56.30 62.18 70.59 82.35 87.39 91.60 94.96 94.96 94.96 94.96 94.96 94.96 94.96 94.96 94.96 94.96 94.96 94.96 94.96 GDT RMS_LOCAL 0.35 0.50 0.62 1.17 1.49 1.58 1.73 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 GDT RMS_ALL_AT 2.70 2.74 2.74 2.03 1.95 1.94 1.93 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 1.92 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA A 10 A 10 5.761 1 0.709 0.709 7.562 32.143 25.714 LGA D 11 D 11 2.695 4 0.675 0.675 2.870 59.048 29.524 LGA K 12 K 12 1.431 5 0.092 0.092 1.477 81.429 36.190 LGA P 13 P 13 1.374 3 0.033 0.033 1.523 79.286 45.306 LGA I 14 I 14 1.511 4 0.025 0.025 1.574 77.143 38.571 LGA Y 15 Y 15 1.247 8 0.062 0.062 1.272 81.429 27.143 LGA S 16 S 16 1.254 2 0.047 0.047 1.254 81.429 54.286 LGA Q 17 Q 17 1.500 5 0.025 0.025 1.500 79.286 35.238 LGA I 18 I 18 1.199 4 0.025 0.025 1.270 81.429 40.714 LGA S 19 S 19 0.716 2 0.076 0.076 0.954 90.476 60.317 LGA D 20 D 20 1.203 4 0.014 0.014 1.203 81.429 40.714 LGA W 21 W 21 1.359 10 0.040 0.040 1.359 83.690 23.912 LGA M 22 M 22 0.827 4 0.008 0.008 1.035 90.595 45.298 LGA K 23 K 23 0.701 5 0.014 0.014 0.738 90.476 40.212 LGA K 24 K 24 0.632 5 0.013 0.013 0.656 90.476 40.212 LGA Q 25 Q 25 0.431 5 0.045 0.045 0.514 97.619 43.386 LGA M 26 M 26 0.359 4 0.081 0.081 0.877 95.238 47.619 LGA I 27 I 27 0.991 4 0.038 0.038 1.137 85.952 42.976 LGA T 28 T 28 1.041 3 0.094 0.094 1.568 81.548 46.599 LGA G 29 G 29 0.886 0 0.053 0.053 0.983 90.476 90.476 LGA E 30 E 30 0.821 5 0.075 0.075 0.861 92.857 41.270 LGA W 31 W 31 0.486 10 0.031 0.031 0.569 95.238 27.211 LGA K 32 K 32 0.467 5 0.000 0.000 0.711 95.238 42.328 LGA G 33 G 33 0.823 0 0.048 0.048 0.843 90.476 90.476 LGA E 34 E 34 0.930 5 0.027 0.027 0.958 90.476 40.212 LGA D 35 D 35 0.542 4 0.012 0.012 0.565 92.857 46.429 LGA K 36 K 36 0.587 5 0.062 0.062 0.954 90.476 40.212 LGA L 37 L 37 0.625 4 0.088 0.088 0.863 90.476 45.238 LGA P 38 P 38 1.062 3 0.032 0.032 1.062 88.214 50.408 LGA S 39 S 39 1.035 2 0.028 0.028 1.037 85.952 57.302 LGA V 40 V 40 1.358 3 0.065 0.065 1.623 77.143 44.082 LGA R 41 R 41 1.968 7 0.062 0.062 1.968 72.857 26.494 LGA E 42 E 42 1.320 5 0.020 0.020 1.498 81.429 36.190 LGA M 43 M 43 1.034 4 0.059 0.059 1.496 81.429 40.714 LGA G 44 G 44 1.727 0 0.020 0.020 2.041 72.976 72.976 LGA V 45 V 45 2.059 3 0.020 0.020 2.274 66.786 38.163 LGA K 46 K 46 1.629 5 0.048 0.048 1.702 72.857 32.381 LGA L 47 L 47 1.685 4 0.051 0.051 1.887 72.857 36.429 LGA A 48 A 48 1.952 1 0.059 0.059 1.952 72.857 58.286 LGA V 49 V 49 1.801 3 0.048 0.048 1.847 72.857 41.633 LGA N 50 N 50 1.889 4 0.015 0.015 1.889 72.857 36.429 LGA P 51 P 51 1.869 3 0.055 0.055 1.869 72.857 41.633 LGA N 52 N 52 1.601 4 0.031 0.031 1.773 75.000 37.500 LGA T 53 T 53 1.486 3 0.028 0.028 1.538 75.000 42.857 LGA V 54 V 54 1.569 3 0.046 0.046 1.569 72.857 41.633 LGA S 55 S 55 1.409 2 0.022 0.022 1.429 81.429 54.286 LGA R 56 R 56 1.237 7 0.087 0.087 1.442 81.429 29.610 LGA A 57 A 57 1.206 1 0.052 0.052 1.206 83.690 66.952 LGA Y 58 Y 58 0.840 8 0.024 0.024 0.996 90.476 30.159 LGA Q 59 Q 59 0.552 5 0.076 0.076 0.782 95.238 42.328 LGA E 60 E 60 0.565 5 0.056 0.056 0.578 90.476 40.212 LGA L 61 L 61 0.797 4 0.015 0.015 0.821 90.476 45.238 LGA E 62 E 62 0.504 5 0.037 0.037 1.085 90.595 40.265 LGA R 63 R 63 1.161 7 0.035 0.035 1.754 81.548 29.654 LGA A 64 A 64 1.699 1 0.032 0.032 2.038 72.976 58.381 LGA G 65 G 65 1.264 0 0.116 0.116 1.582 79.286 79.286 LGA Y 66 Y 66 1.114 8 0.040 0.040 1.114 85.952 28.651 LGA I 67 I 67 0.339 4 0.037 0.037 0.563 97.619 48.810 LGA Y 68 Y 68 0.263 8 0.038 0.038 0.264 100.000 33.333 LGA A 69 A 69 0.093 1 0.048 0.048 0.351 100.000 80.000 LGA K 70 K 70 0.828 5 0.077 0.077 1.278 88.214 39.206 LGA R 71 R 71 1.111 7 0.013 0.013 1.922 79.405 28.874 LGA G 72 G 72 2.395 0 0.235 0.235 2.395 68.810 68.810 LGA M 73 M 73 1.999 4 0.091 0.091 2.112 70.833 35.417 LGA G 74 G 74 1.599 0 0.048 0.048 1.757 79.405 79.405 LGA S 75 S 75 0.694 2 0.057 0.057 1.125 92.976 61.984 LGA F 76 F 76 0.201 7 0.018 0.018 0.339 100.000 36.364 LGA V 77 V 77 0.228 3 0.095 0.095 0.672 97.619 55.782 LGA T 78 T 78 0.490 3 0.072 0.072 0.973 95.238 54.422 LGA S 79 S 79 1.035 2 0.574 0.574 1.830 83.810 55.873 LGA D 80 D 80 1.768 4 0.201 0.201 2.556 65.000 32.500 LGA K 81 K 81 4.303 5 0.042 0.042 4.303 41.905 18.624 LGA A 82 A 82 3.938 1 0.032 0.032 3.938 48.452 38.762 LGA L 83 L 83 1.544 4 0.062 0.062 2.058 75.119 37.560 LGA F 84 F 84 2.617 7 0.023 0.023 3.281 57.500 20.909 LGA D 85 D 85 4.158 4 0.023 0.023 4.158 41.786 20.893 LGA Q 86 Q 86 2.651 5 0.043 0.043 2.896 65.000 28.889 LGA L 87 L 87 1.449 4 0.082 0.082 2.008 75.119 37.560 LGA K 88 K 88 3.311 5 0.054 0.054 3.505 52.024 23.122 LGA K 89 K 89 3.547 5 0.054 0.054 3.547 51.905 23.069 LGA E 90 E 90 1.542 5 0.018 0.018 2.062 75.119 33.386 LGA L 91 L 91 2.258 4 0.032 0.032 2.630 62.976 31.488 LGA A 92 A 92 3.257 1 0.039 0.039 3.257 55.357 44.286 LGA D 93 D 93 2.064 4 0.022 0.022 2.259 73.095 36.548 LGA A 94 A 94 1.498 1 0.015 0.015 1.913 77.143 61.714 LGA I 95 I 95 2.456 4 0.035 0.035 2.456 68.810 34.405 LGA T 96 T 96 1.655 3 0.043 0.043 1.728 77.143 44.082 LGA E 97 E 97 1.634 5 0.014 0.014 1.830 75.000 33.333 LGA R 98 R 98 2.166 7 0.028 0.028 2.230 68.810 25.022 LGA F 99 F 99 1.907 7 0.038 0.038 1.907 77.143 28.052 LGA L 100 L 100 1.552 4 0.065 0.065 2.039 72.976 36.488 LGA E 101 E 101 2.839 5 0.019 0.019 3.404 57.262 25.450 LGA E 102 E 102 2.914 5 0.019 0.019 2.914 59.048 26.243 LGA A 103 A 103 1.358 1 0.030 0.030 2.061 72.976 58.381 LGA K 104 K 104 3.488 5 0.017 0.017 4.032 46.905 20.847 LGA S 105 S 105 4.381 2 0.041 0.041 4.509 38.810 25.873 LGA I 106 I 106 2.496 4 0.061 0.061 3.011 63.095 31.548 LGA G 107 G 107 2.413 0 0.119 0.119 2.466 64.762 64.762 LGA L 108 L 108 2.169 4 0.041 0.041 2.609 62.857 31.429 LGA D 109 D 109 2.759 4 0.055 0.055 2.759 59.048 29.524 LGA D 110 D 110 2.717 4 0.037 0.037 2.761 57.143 28.571 LGA Q 111 Q 111 2.476 5 0.099 0.099 2.599 60.952 27.090 LGA T 112 T 112 1.836 3 0.032 0.032 1.998 72.857 41.633 LGA A 113 A 113 2.139 1 0.024 0.024 2.472 66.786 53.429 LGA I 114 I 114 2.831 4 0.046 0.046 2.831 60.952 30.476 LGA E 115 E 115 1.631 5 0.056 0.056 2.036 75.119 33.386 LGA L 116 L 116 1.375 4 0.040 0.040 1.777 77.143 38.571 LGA L 117 L 117 2.311 4 0.007 0.007 2.359 66.786 33.393 LGA I 118 I 118 1.830 4 0.030 0.030 1.964 75.000 37.500 LGA K 119 K 119 1.025 5 0.022 0.022 1.706 77.143 34.286 LGA R 120 R 120 2.387 7 0.068 0.068 2.922 62.976 22.900 LGA S 121 S 121 2.531 2 0.129 0.129 3.212 57.262 38.175 LGA R 122 R 122 2.055 7 0.650 0.650 3.132 61.190 22.251 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 113 452 452 100.00 902 452 50.11 119 SUMMARY(RMSD_GDC): 1.924 1.862 1.862 72.155 38.929 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 113 119 4.0 113 1.92 79.202 86.267 5.582 LGA_LOCAL RMSD: 1.924 Number of atoms: 113 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.924 Number of assigned atoms: 113 Std_ASGN_ATOMS RMSD: 1.924 Standard rmsd on all 113 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.083816 * X + -0.996463 * Y + 0.006013 * Z + 64.949493 Y_new = -0.025235 * X + -0.008155 * Y + -0.999648 * Z + 31.068655 Z_new = 0.996162 * X + 0.083635 * Y + -0.025829 * Z + -13.864419 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.292438 -1.483152 1.870332 [DEG: -16.7555 -84.9784 107.1621 ] ZXZ: 0.006015 1.596628 1.487036 [DEG: 0.3446 91.4800 85.2009 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0586AL285_1 REMARK 2: T0586.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0586AL285_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 113 119 4.0 113 1.92 86.267 1.92 REMARK ---------------------------------------------------------- MOLECULE T0586AL285_1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 3by6A ATOM 1 N ALA 10 -4.982 1.621 -5.945 1.00 0.00 N ATOM 2 CA ALA 10 -4.119 2.046 -7.023 1.00 0.00 C ATOM 3 C ALA 10 -2.826 2.626 -6.448 1.00 0.00 C ATOM 4 O ALA 10 -2.721 2.865 -5.240 1.00 0.00 O ATOM 5 N ASP 11 -1.846 2.838 -7.329 1.00 0.00 N ATOM 6 CA ASP 11 -0.650 3.636 -6.999 1.00 0.00 C ATOM 7 C ASP 11 -1.086 4.935 -6.290 1.00 0.00 C ATOM 8 O ASP 11 -2.110 5.538 -6.640 1.00 0.00 O ATOM 9 N LYS 12 -0.362 5.321 -5.240 1.00 0.00 N ATOM 10 CA LYS 12 -0.587 6.622 -4.642 1.00 0.00 C ATOM 11 C LYS 12 0.025 7.644 -5.617 1.00 0.00 C ATOM 12 O LYS 12 1.164 7.468 -6.029 1.00 0.00 O ATOM 13 N PRO 13 -0.712 8.710 -5.980 1.00 0.00 N ATOM 14 CA PRO 13 -0.112 9.564 -7.046 1.00 0.00 C ATOM 15 C PRO 13 1.259 10.061 -6.595 1.00 0.00 C ATOM 16 O PRO 13 1.475 10.306 -5.407 1.00 0.00 O ATOM 17 N ILE 14 2.196 10.138 -7.528 1.00 0.00 N ATOM 18 CA ILE 14 3.558 10.521 -7.188 1.00 0.00 C ATOM 19 C ILE 14 3.593 11.871 -6.466 1.00 0.00 C ATOM 20 O ILE 14 4.398 12.061 -5.571 1.00 0.00 O ATOM 21 N TYR 15 2.701 12.790 -6.828 1.00 0.00 N ATOM 22 CA TYR 15 2.744 14.135 -6.248 1.00 0.00 C ATOM 23 C TYR 15 2.328 14.103 -4.783 1.00 0.00 C ATOM 24 O TYR 15 2.740 14.973 -3.981 1.00 0.00 O ATOM 25 N SER 16 1.482 13.118 -4.444 1.00 0.00 N ATOM 26 CA SER 16 1.061 12.936 -3.042 1.00 0.00 C ATOM 27 C SER 16 2.115 12.195 -2.236 1.00 0.00 C ATOM 28 O SER 16 2.237 12.416 -1.054 1.00 0.00 O ATOM 29 N GLN 17 2.902 11.356 -2.887 1.00 0.00 N ATOM 30 CA GLN 17 4.063 10.732 -2.238 1.00 0.00 C ATOM 31 C GLN 17 5.129 11.772 -1.824 1.00 0.00 C ATOM 32 O GLN 17 5.805 11.660 -0.784 1.00 0.00 O ATOM 33 N ILE 18 5.272 12.796 -2.655 1.00 0.00 N ATOM 34 CA ILE 18 6.236 13.864 -2.375 1.00 0.00 C ATOM 35 C ILE 18 5.678 14.777 -1.297 1.00 0.00 C ATOM 36 O ILE 18 6.397 15.200 -0.413 1.00 0.00 O ATOM 37 N SER 19 4.388 15.069 -1.357 1.00 0.00 N ATOM 38 CA SER 19 3.720 15.795 -0.256 1.00 0.00 C ATOM 39 C SER 19 3.993 15.038 1.039 1.00 0.00 C ATOM 40 O SER 19 4.457 15.629 2.027 1.00 0.00 O ATOM 41 N ASP 20 3.764 13.720 1.024 1.00 0.00 N ATOM 42 CA ASP 20 3.986 12.902 2.223 1.00 0.00 C ATOM 43 C ASP 20 5.406 13.039 2.780 1.00 0.00 C ATOM 44 O ASP 20 5.600 13.217 3.980 1.00 0.00 O ATOM 45 N TRP 21 6.385 12.921 1.887 1.00 0.00 N ATOM 46 CA TRP 21 7.811 13.034 2.216 1.00 0.00 C ATOM 47 C TRP 21 8.166 14.364 2.846 1.00 0.00 C ATOM 48 O TRP 21 8.756 14.410 3.919 1.00 0.00 O ATOM 49 N MET 22 7.790 15.455 2.206 1.00 0.00 N ATOM 50 CA MET 22 8.107 16.774 2.757 1.00 0.00 C ATOM 51 C MET 22 7.420 16.994 4.090 1.00 0.00 C ATOM 52 O MET 22 8.019 17.521 5.026 1.00 0.00 O ATOM 53 N LYS 23 6.174 16.547 4.174 1.00 0.00 N ATOM 54 CA LYS 23 5.363 16.693 5.387 1.00 0.00 C ATOM 55 C LYS 23 5.977 15.963 6.551 1.00 0.00 C ATOM 56 O LYS 23 5.965 16.476 7.667 1.00 0.00 O ATOM 57 N LYS 24 6.506 14.758 6.287 1.00 0.00 N ATOM 58 CA LYS 24 7.090 13.927 7.326 1.00 0.00 C ATOM 59 C LYS 24 8.447 14.458 7.737 1.00 0.00 C ATOM 60 O LYS 24 8.808 14.476 8.920 1.00 0.00 O ATOM 61 N GLN 25 9.200 14.909 6.756 1.00 0.00 N ATOM 62 CA GLN 25 10.412 15.604 7.038 1.00 0.00 C ATOM 63 C GLN 25 10.230 16.822 7.908 1.00 0.00 C ATOM 64 O GLN 25 11.077 17.073 8.762 1.00 0.00 O ATOM 65 N MET 26 9.159 17.595 7.688 1.00 0.00 N ATOM 66 CA MET 26 8.803 18.682 8.623 1.00 0.00 C ATOM 67 C MET 26 8.459 18.155 10.019 1.00 0.00 C ATOM 68 O MET 26 8.977 18.661 11.012 1.00 0.00 O ATOM 69 N ILE 27 7.592 17.142 10.086 1.00 0.00 N ATOM 70 CA ILE 27 7.208 16.512 11.361 1.00 0.00 C ATOM 71 C ILE 27 8.389 15.935 12.154 1.00 0.00 C ATOM 72 O ILE 27 8.383 15.967 13.380 1.00 0.00 O ATOM 73 N THR 28 9.396 15.398 11.473 1.00 0.00 N ATOM 74 CA THR 28 10.550 14.811 12.145 1.00 0.00 C ATOM 75 C THR 28 11.778 15.743 12.268 1.00 0.00 C ATOM 76 O THR 28 12.851 15.288 12.669 1.00 0.00 O ATOM 77 N GLY 29 11.599 17.026 11.925 1.00 0.00 N ATOM 78 CA GLY 29 12.620 18.100 11.960 1.00 0.00 C ATOM 79 C GLY 29 13.818 17.873 11.083 1.00 0.00 C ATOM 80 O GLY 29 14.844 18.455 11.315 1.00 0.00 O ATOM 81 N GLU 30 13.698 17.063 10.046 1.00 0.00 N ATOM 82 CA GLU 30 14.674 17.141 8.982 1.00 0.00 C ATOM 83 C GLU 30 14.538 18.567 8.397 1.00 0.00 C ATOM 84 O GLU 30 15.559 19.292 8.253 1.00 0.00 O ATOM 85 N TRP 31 13.287 18.987 8.139 1.00 0.00 N ATOM 86 CA TRP 31 12.999 20.361 7.687 1.00 0.00 C ATOM 87 C TRP 31 12.366 21.170 8.813 1.00 0.00 C ATOM 88 O TRP 31 11.349 20.790 9.361 1.00 0.00 O ATOM 89 N LYS 32 12.987 22.300 9.141 1.00 0.00 N ATOM 90 CA LYS 32 12.543 23.162 10.227 1.00 0.00 C ATOM 91 C LYS 32 11.684 24.298 9.697 1.00 0.00 C ATOM 92 O LYS 32 11.638 24.552 8.490 1.00 0.00 O ATOM 93 N GLY 33 10.999 24.953 10.623 1.00 0.00 N ATOM 94 CA GLY 33 10.210 26.126 10.346 1.00 0.00 C ATOM 95 C GLY 33 11.056 27.206 9.661 1.00 0.00 C ATOM 96 O GLY 33 12.137 27.585 10.119 1.00 0.00 O ATOM 97 N GLU 34 10.534 27.679 8.538 1.00 0.00 N ATOM 98 CA GLU 34 11.096 28.779 7.767 1.00 0.00 C ATOM 99 C GLU 34 12.312 28.403 6.952 1.00 0.00 C ATOM 100 O GLU 34 12.837 29.251 6.266 1.00 0.00 O ATOM 101 N ASP 35 12.699 27.131 6.960 1.00 0.00 N ATOM 102 CA ASP 35 13.762 26.656 6.093 1.00 0.00 C ATOM 103 C ASP 35 13.362 26.903 4.627 1.00 0.00 C ATOM 104 O ASP 35 12.206 26.688 4.251 1.00 0.00 O ATOM 105 N LYS 36 14.325 27.284 3.802 1.00 0.00 N ATOM 106 CA LYS 36 14.103 27.388 2.372 1.00 0.00 C ATOM 107 C LYS 36 14.000 25.986 1.842 1.00 0.00 C ATOM 108 O LYS 36 14.768 25.130 2.199 1.00 0.00 O ATOM 109 N LEU 37 13.019 25.758 0.997 1.00 0.00 N ATOM 110 CA LEU 37 12.805 24.504 0.373 1.00 0.00 C ATOM 111 C LEU 37 13.421 24.669 -1.011 1.00 0.00 C ATOM 112 O LEU 37 13.518 25.785 -1.499 1.00 0.00 O ATOM 113 N PRO 38 13.908 23.583 -1.631 1.00 0.00 N ATOM 114 CA PRO 38 14.415 23.798 -2.992 1.00 0.00 C ATOM 115 C PRO 38 13.308 24.244 -3.956 1.00 0.00 C ATOM 116 O PRO 38 12.128 24.113 -3.646 1.00 0.00 O ATOM 117 N SER 39 13.693 24.703 -5.141 1.00 0.00 N ATOM 118 CA SER 39 12.745 25.109 -6.142 1.00 0.00 C ATOM 119 C SER 39 12.073 23.882 -6.743 1.00 0.00 C ATOM 120 O SER 39 12.524 22.738 -6.524 1.00 0.00 O ATOM 121 N VAL 40 11.013 24.100 -7.516 1.00 0.00 N ATOM 122 CA VAL 40 10.378 23.024 -8.262 1.00 0.00 C ATOM 123 C VAL 40 11.436 22.380 -9.133 1.00 0.00 C ATOM 124 O VAL 40 11.534 21.159 -9.159 1.00 0.00 O ATOM 125 N ARG 41 12.221 23.190 -9.868 1.00 0.00 N ATOM 126 CA ARG 41 13.323 22.658 -10.690 1.00 0.00 C ATOM 127 C ARG 41 14.302 21.722 -9.899 1.00 0.00 C ATOM 128 O ARG 41 14.549 20.588 -10.302 1.00 0.00 O ATOM 129 N GLU 42 14.886 22.260 -8.820 1.00 0.00 N ATOM 130 CA GLU 42 15.825 21.545 -7.989 1.00 0.00 C ATOM 131 C GLU 42 15.223 20.255 -7.439 1.00 0.00 C ATOM 132 O GLU 42 15.851 19.185 -7.491 1.00 0.00 O ATOM 133 N MET 43 14.013 20.329 -6.908 1.00 0.00 N ATOM 134 CA MET 43 13.314 19.122 -6.491 1.00 0.00 C ATOM 135 C MET 43 13.111 18.138 -7.648 1.00 0.00 C ATOM 136 O MET 43 13.421 16.960 -7.517 1.00 0.00 O ATOM 137 N GLY 44 12.606 18.592 -8.774 1.00 0.00 N ATOM 138 CA GLY 44 12.395 17.710 -9.922 1.00 0.00 C ATOM 139 C GLY 44 13.722 17.023 -10.300 1.00 0.00 C ATOM 140 O GLY 44 13.734 15.852 -10.653 1.00 0.00 O ATOM 141 N VAL 45 14.829 17.752 -10.166 1.00 0.00 N ATOM 142 CA VAL 45 16.156 17.320 -10.623 1.00 0.00 C ATOM 143 C VAL 45 16.745 16.325 -9.622 1.00 0.00 C ATOM 144 O VAL 45 17.237 15.286 -10.031 1.00 0.00 O ATOM 145 N LYS 46 16.638 16.635 -8.323 1.00 0.00 N ATOM 146 CA LYS 46 17.061 15.763 -7.228 1.00 0.00 C ATOM 147 C LYS 46 16.220 14.486 -7.050 1.00 0.00 C ATOM 148 O LYS 46 16.737 13.427 -6.677 1.00 0.00 O ATOM 149 N LEU 47 14.919 14.572 -7.269 1.00 0.00 N ATOM 150 CA LEU 47 14.072 13.425 -7.058 1.00 0.00 C ATOM 151 C LEU 47 13.712 12.685 -8.324 1.00 0.00 C ATOM 152 O LEU 47 12.988 11.718 -8.263 1.00 0.00 O ATOM 153 N ALA 48 14.210 13.107 -9.465 1.00 0.00 N ATOM 154 CA ALA 48 13.755 12.581 -10.765 1.00 0.00 C ATOM 155 C ALA 48 12.230 12.472 -10.883 1.00 0.00 C ATOM 156 O ALA 48 11.689 11.380 -11.138 1.00 0.00 O ATOM 157 N VAL 49 11.543 13.604 -10.695 1.00 0.00 N ATOM 158 CA VAL 49 10.085 13.714 -10.801 1.00 0.00 C ATOM 159 C VAL 49 9.836 14.822 -11.811 1.00 0.00 C ATOM 160 O VAL 49 10.559 15.807 -11.780 1.00 0.00 O ATOM 161 N ASN 50 8.876 14.657 -12.728 1.00 0.00 N ATOM 162 CA ASN 50 8.450 15.735 -13.663 1.00 0.00 C ATOM 163 C ASN 50 8.111 17.022 -12.880 1.00 0.00 C ATOM 164 O ASN 50 7.374 16.963 -11.887 1.00 0.00 O ATOM 165 N PRO 51 8.659 18.188 -13.296 1.00 0.00 N ATOM 166 CA PRO 51 8.387 19.451 -12.612 1.00 0.00 C ATOM 167 C PRO 51 6.927 19.788 -12.372 1.00 0.00 C ATOM 168 O PRO 51 6.626 20.376 -11.352 1.00 0.00 O ATOM 169 N ASN 52 6.053 19.441 -13.314 1.00 0.00 N ATOM 170 CA ASN 52 4.624 19.579 -13.160 1.00 0.00 C ATOM 171 C ASN 52 4.093 18.829 -11.935 1.00 0.00 C ATOM 172 O ASN 52 3.254 19.342 -11.197 1.00 0.00 O ATOM 173 N THR 53 4.561 17.598 -11.744 1.00 0.00 N ATOM 174 CA THR 53 4.209 16.818 -10.569 1.00 0.00 C ATOM 175 C THR 53 4.769 17.505 -9.342 1.00 0.00 C ATOM 176 O THR 53 4.078 17.618 -8.353 1.00 0.00 O ATOM 177 N VAL 54 6.014 17.973 -9.381 1.00 0.00 N ATOM 178 CA VAL 54 6.562 18.733 -8.205 1.00 0.00 C ATOM 179 C VAL 54 5.735 20.008 -7.888 1.00 0.00 C ATOM 180 O VAL 54 5.530 20.354 -6.732 1.00 0.00 O ATOM 181 N SER 55 5.267 20.690 -8.919 1.00 0.00 N ATOM 182 CA SER 55 4.510 21.920 -8.770 1.00 0.00 C ATOM 183 C SER 55 3.149 21.587 -8.187 1.00 0.00 C ATOM 184 O SER 55 2.622 22.288 -7.321 1.00 0.00 O ATOM 185 N ARG 56 2.593 20.479 -8.655 1.00 0.00 N ATOM 186 CA ARG 56 1.371 19.917 -8.071 1.00 0.00 C ATOM 187 C ARG 56 1.567 19.531 -6.597 1.00 0.00 C ATOM 188 O ARG 56 0.811 19.942 -5.750 1.00 0.00 O ATOM 189 N ALA 57 2.610 18.774 -6.277 1.00 0.00 N ATOM 190 CA ALA 57 3.015 18.655 -4.879 1.00 0.00 C ATOM 191 C ALA 57 3.052 19.950 -4.061 1.00 0.00 C ATOM 192 O ALA 57 2.470 20.028 -2.990 1.00 0.00 O ATOM 193 N TYR 58 3.763 20.965 -4.542 1.00 0.00 N ATOM 194 CA TYR 58 4.040 22.194 -3.801 1.00 0.00 C ATOM 195 C TYR 58 2.736 23.001 -3.569 1.00 0.00 C ATOM 196 O TYR 58 2.502 23.609 -2.496 1.00 0.00 O ATOM 197 N GLN 59 1.892 22.978 -4.586 1.00 0.00 N ATOM 198 CA GLN 59 0.546 23.511 -4.479 1.00 0.00 C ATOM 199 C GLN 59 -0.267 22.824 -3.390 1.00 0.00 C ATOM 200 O GLN 59 -0.793 23.480 -2.508 1.00 0.00 O ATOM 201 N GLU 60 -0.347 21.505 -3.437 1.00 0.00 N ATOM 202 CA GLU 60 -0.980 20.752 -2.351 1.00 0.00 C ATOM 203 C GLU 60 -0.414 21.100 -0.958 1.00 0.00 C ATOM 204 O GLU 60 -1.178 21.492 -0.064 1.00 0.00 O ATOM 205 N LEU 61 0.907 20.990 -0.795 1.00 0.00 N ATOM 206 CA LEU 61 1.592 21.371 0.449 1.00 0.00 C ATOM 207 C LEU 61 1.256 22.785 0.910 1.00 0.00 C ATOM 208 O LEU 61 1.141 23.061 2.123 1.00 0.00 O ATOM 209 N GLU 62 1.109 23.706 -0.033 1.00 0.00 N ATOM 210 CA GLU 62 0.749 25.056 0.349 1.00 0.00 C ATOM 211 C GLU 62 -0.714 25.166 0.854 1.00 0.00 C ATOM 212 O GLU 62 -0.971 25.815 1.873 1.00 0.00 O ATOM 213 N ARG 63 -1.631 24.491 0.148 1.00 0.00 N ATOM 214 CA ARG 63 -3.041 24.334 0.540 1.00 0.00 C ATOM 215 C ARG 63 -3.170 23.770 1.952 1.00 0.00 C ATOM 216 O ARG 63 -3.986 24.217 2.745 1.00 0.00 O ATOM 217 N ALA 64 -2.353 22.786 2.282 1.00 0.00 N ATOM 218 CA ALA 64 -2.318 22.226 3.635 1.00 0.00 C ATOM 219 C ALA 64 -1.506 23.023 4.641 1.00 0.00 C ATOM 220 O ALA 64 -1.378 22.586 5.788 1.00 0.00 O ATOM 221 N GLY 65 -0.925 24.150 4.186 1.00 0.00 N ATOM 222 CA GLY 65 -0.129 25.109 4.972 1.00 0.00 C ATOM 223 C GLY 65 1.181 24.534 5.480 1.00 0.00 C ATOM 224 O GLY 65 1.638 24.863 6.578 1.00 0.00 O ATOM 225 N TYR 66 1.797 23.665 4.694 1.00 0.00 N ATOM 226 CA TYR 66 3.070 23.095 5.100 1.00 0.00 C ATOM 227 C TYR 66 4.210 23.974 4.555 1.00 0.00 C ATOM 228 O TYR 66 5.320 24.042 5.111 1.00 0.00 O ATOM 229 N ILE 67 3.931 24.629 3.444 1.00 0.00 N ATOM 230 CA ILE 67 4.885 25.540 2.848 1.00 0.00 C ATOM 231 C ILE 67 4.210 26.826 2.398 1.00 0.00 C ATOM 232 O ILE 67 2.984 26.907 2.316 1.00 0.00 O ATOM 233 N TYR 68 5.045 27.838 2.153 1.00 0.00 N ATOM 234 CA TYR 68 4.618 29.096 1.551 1.00 0.00 C ATOM 235 C TYR 68 5.678 29.684 0.621 1.00 0.00 C ATOM 236 O TYR 68 6.860 29.462 0.781 1.00 0.00 O ATOM 237 N ALA 69 5.223 30.484 -0.324 1.00 0.00 N ATOM 238 CA ALA 69 6.116 31.186 -1.222 1.00 0.00 C ATOM 239 C ALA 69 6.200 32.680 -0.901 1.00 0.00 C ATOM 240 O ALA 69 5.202 33.322 -0.571 1.00 0.00 O ATOM 241 N LYS 70 7.409 33.221 -0.981 1.00 0.00 N ATOM 242 CA LYS 70 7.642 34.650 -0.822 1.00 0.00 C ATOM 243 C LYS 70 8.113 35.140 -2.190 1.00 0.00 C ATOM 244 O LYS 70 9.094 34.630 -2.714 1.00 0.00 O ATOM 245 N ARG 71 7.376 36.092 -2.786 1.00 0.00 N ATOM 246 CA ARG 71 7.692 36.672 -4.091 1.00 0.00 C ATOM 247 C ARG 71 9.152 37.086 -4.190 1.00 0.00 C ATOM 248 O ARG 71 9.622 37.828 -3.352 1.00 0.00 O ATOM 249 N GLY 72 9.870 36.546 -5.167 1.00 0.00 N ATOM 250 CA GLY 72 11.286 36.854 -5.319 1.00 0.00 C ATOM 251 C GLY 72 12.306 36.106 -4.450 1.00 0.00 C ATOM 252 O GLY 72 13.507 36.161 -4.703 1.00 0.00 O ATOM 253 N MET 73 11.814 35.388 -3.453 1.00 0.00 N ATOM 254 CA MET 73 12.647 34.773 -2.419 1.00 0.00 C ATOM 255 C MET 73 12.560 33.245 -2.436 1.00 0.00 C ATOM 256 O MET 73 13.448 32.581 -1.886 1.00 0.00 O ATOM 257 N GLY 74 11.513 32.688 -3.041 1.00 0.00 N ATOM 258 CA GLY 74 11.327 31.238 -3.093 1.00 0.00 C ATOM 259 C GLY 74 10.288 30.620 -2.134 1.00 0.00 C ATOM 260 O GLY 74 9.377 31.286 -1.622 1.00 0.00 O ATOM 261 N SER 75 10.484 29.338 -1.853 1.00 0.00 N ATOM 262 CA SER 75 9.530 28.513 -1.130 1.00 0.00 C ATOM 263 C SER 75 10.166 28.057 0.159 1.00 0.00 C ATOM 264 O SER 75 11.323 27.636 0.146 1.00 0.00 O ATOM 265 N PHE 76 9.389 28.168 1.243 1.00 0.00 N ATOM 266 CA PHE 76 9.810 28.021 2.618 1.00 0.00 C ATOM 267 C PHE 76 8.861 27.082 3.372 1.00 0.00 C ATOM 268 O PHE 76 7.666 26.990 3.073 1.00 0.00 O ATOM 269 N VAL 77 9.418 26.342 4.319 1.00 0.00 N ATOM 270 CA VAL 77 8.602 25.591 5.275 1.00 0.00 C ATOM 271 C VAL 77 7.853 26.663 6.060 1.00 0.00 C ATOM 272 O VAL 77 8.393 27.694 6.349 1.00 0.00 O ATOM 273 N THR 78 6.570 26.454 6.276 1.00 0.00 N ATOM 274 CA THR 78 5.758 27.277 7.162 1.00 0.00 C ATOM 275 C THR 78 6.456 27.566 8.499 1.00 0.00 C ATOM 276 O THR 78 7.376 26.862 8.912 1.00 0.00 O ATOM 277 N SER 79 6.011 28.637 9.144 1.00 0.00 N ATOM 278 CA SER 79 6.340 28.909 10.529 1.00 0.00 C ATOM 279 C SER 79 5.387 28.190 11.445 1.00 0.00 C ATOM 280 O SER 79 5.679 28.015 12.622 1.00 0.00 O ATOM 281 N ASP 80 4.239 27.771 10.895 1.00 0.00 N ATOM 282 CA ASP 80 3.190 27.071 11.649 1.00 0.00 C ATOM 283 C ASP 80 3.463 25.555 11.646 1.00 0.00 C ATOM 284 O ASP 80 2.636 24.732 11.198 1.00 0.00 O ATOM 285 N LYS 81 4.617 25.215 12.178 1.00 0.00 N ATOM 286 CA LYS 81 5.186 23.890 12.106 1.00 0.00 C ATOM 287 C LYS 81 4.614 22.925 13.206 1.00 0.00 C ATOM 288 O LYS 81 4.457 21.707 12.999 1.00 0.00 O ATOM 289 N ALA 82 4.239 23.467 14.359 1.00 0.00 N ATOM 290 CA ALA 82 3.585 22.675 15.394 1.00 0.00 C ATOM 291 C ALA 82 2.261 22.121 14.872 1.00 0.00 C ATOM 292 O ALA 82 1.881 21.010 15.208 1.00 0.00 O ATOM 293 N LEU 83 1.555 22.888 14.040 1.00 0.00 N ATOM 294 CA LEU 83 0.306 22.396 13.467 1.00 0.00 C ATOM 295 C LEU 83 0.528 21.221 12.500 1.00 0.00 C ATOM 296 O LEU 83 -0.299 20.296 12.444 1.00 0.00 O ATOM 297 N PHE 84 1.654 21.228 11.784 1.00 0.00 N ATOM 298 CA PHE 84 2.014 20.127 10.868 1.00 0.00 C ATOM 299 C PHE 84 2.324 18.806 11.626 1.00 0.00 C ATOM 300 O PHE 84 1.948 17.723 11.188 1.00 0.00 O ATOM 301 N ASP 85 3.064 18.931 12.718 1.00 0.00 N ATOM 302 CA ASP 85 3.403 17.844 13.601 1.00 0.00 C ATOM 303 C ASP 85 2.146 17.187 14.210 1.00 0.00 C ATOM 304 O ASP 85 2.075 15.948 14.286 1.00 0.00 O ATOM 305 N GLN 86 1.171 18.015 14.636 1.00 0.00 N ATOM 306 CA GLN 86 -0.068 17.499 15.236 1.00 0.00 C ATOM 307 C GLN 86 -0.901 16.774 14.215 1.00 0.00 C ATOM 308 O GLN 86 -1.454 15.729 14.499 1.00 0.00 O ATOM 309 N LEU 87 -1.021 17.344 13.024 1.00 0.00 N ATOM 310 CA LEU 87 -1.719 16.639 11.953 1.00 0.00 C ATOM 311 C LEU 87 -1.022 15.298 11.615 1.00 0.00 C ATOM 312 O LEU 87 -1.676 14.331 11.204 1.00 0.00 O ATOM 313 N LYS 88 0.300 15.262 11.767 1.00 0.00 N ATOM 314 CA LYS 88 1.064 14.044 11.459 1.00 0.00 C ATOM 315 C LYS 88 0.766 12.950 12.467 1.00 0.00 C ATOM 316 O LYS 88 0.423 11.816 12.107 1.00 0.00 O ATOM 317 N LYS 89 0.888 13.319 13.741 1.00 0.00 N ATOM 318 CA LYS 89 0.460 12.462 14.855 1.00 0.00 C ATOM 319 C LYS 89 -0.940 11.948 14.698 1.00 0.00 C ATOM 320 O LYS 89 -1.217 10.821 15.103 1.00 0.00 O ATOM 321 N GLU 90 -1.827 12.745 14.124 1.00 0.00 N ATOM 322 CA GLU 90 -3.212 12.302 13.927 1.00 0.00 C ATOM 323 C GLU 90 -3.323 11.235 12.869 1.00 0.00 C ATOM 324 O GLU 90 -4.089 10.285 13.031 1.00 0.00 O ATOM 325 N LEU 91 -2.565 11.394 11.786 1.00 0.00 N ATOM 326 CA LEU 91 -2.471 10.362 10.755 1.00 0.00 C ATOM 327 C LEU 91 -2.035 9.044 11.395 1.00 0.00 C ATOM 328 O LEU 91 -2.573 8.003 11.101 1.00 0.00 O ATOM 329 N ALA 92 -1.045 9.140 12.268 1.00 0.00 N ATOM 330 CA ALA 92 -0.414 8.020 12.937 1.00 0.00 C ATOM 331 C ALA 92 -1.330 7.356 13.970 1.00 0.00 C ATOM 332 O ALA 92 -1.336 6.137 14.124 1.00 0.00 O ATOM 333 N ASP 93 -2.046 8.195 14.718 1.00 0.00 N ATOM 334 CA ASP 93 -3.043 7.765 15.675 1.00 0.00 C ATOM 335 C ASP 93 -4.192 7.072 14.976 1.00 0.00 C ATOM 336 O ASP 93 -4.729 6.108 15.500 1.00 0.00 O ATOM 337 N ALA 94 -4.592 7.553 13.815 1.00 0.00 N ATOM 338 CA ALA 94 -5.603 6.851 13.045 1.00 0.00 C ATOM 339 C ALA 94 -5.111 5.436 12.699 1.00 0.00 C ATOM 340 O ALA 94 -5.881 4.454 12.731 1.00 0.00 O ATOM 341 N ILE 95 -3.824 5.333 12.342 1.00 0.00 N ATOM 342 CA ILE 95 -3.227 4.036 11.964 1.00 0.00 C ATOM 343 C ILE 95 -3.156 3.143 13.177 1.00 0.00 C ATOM 344 O ILE 95 -3.517 2.000 13.088 1.00 0.00 O ATOM 345 N THR 96 -2.655 3.677 14.293 1.00 0.00 N ATOM 346 CA THR 96 -2.687 2.954 15.570 1.00 0.00 C ATOM 347 C THR 96 -4.061 2.360 15.861 1.00 0.00 C ATOM 348 O THR 96 -4.165 1.208 16.254 1.00 0.00 O ATOM 349 N GLU 97 -5.097 3.179 15.705 1.00 0.00 N ATOM 350 CA GLU 97 -6.461 2.788 15.995 1.00 0.00 C ATOM 351 C GLU 97 -6.881 1.634 15.097 1.00 0.00 C ATOM 352 O GLU 97 -7.437 0.657 15.545 1.00 0.00 O ATOM 353 N ARG 98 -6.576 1.754 13.815 1.00 0.00 N ATOM 354 CA ARG 98 -6.909 0.736 12.824 1.00 0.00 C ATOM 355 C ARG 98 -6.188 -0.625 13.007 1.00 0.00 C ATOM 356 O ARG 98 -6.794 -1.664 12.809 1.00 0.00 O ATOM 357 N PHE 99 -4.902 -0.624 13.343 1.00 0.00 N ATOM 358 CA PHE 99 -4.175 -1.880 13.591 1.00 0.00 C ATOM 359 C PHE 99 -4.724 -2.593 14.835 1.00 0.00 C ATOM 360 O PHE 99 -4.939 -3.813 14.823 1.00 0.00 O ATOM 361 N LEU 100 -4.977 -1.828 15.891 1.00 0.00 N ATOM 362 CA LEU 100 -5.537 -2.390 17.098 1.00 0.00 C ATOM 363 C LEU 100 -6.933 -2.971 16.811 1.00 0.00 C ATOM 364 O LEU 100 -7.237 -4.102 17.227 1.00 0.00 O ATOM 365 N GLU 101 -7.762 -2.230 16.073 1.00 0.00 N ATOM 366 CA GLU 101 -9.064 -2.796 15.695 1.00 0.00 C ATOM 367 C GLU 101 -8.932 -4.136 14.958 1.00 0.00 C ATOM 368 O GLU 101 -9.701 -5.046 15.188 1.00 0.00 O ATOM 369 N GLU 102 -7.961 -4.237 14.061 1.00 0.00 N ATOM 370 CA GLU 102 -7.814 -5.410 13.208 1.00 0.00 C ATOM 371 C GLU 102 -7.221 -6.581 14.004 1.00 0.00 C ATOM 372 O GLU 102 -7.554 -7.742 13.781 1.00 0.00 O ATOM 373 N ALA 103 -6.373 -6.242 14.967 1.00 0.00 N ATOM 374 CA ALA 103 -5.898 -7.177 15.968 1.00 0.00 C ATOM 375 C ALA 103 -7.030 -7.727 16.840 1.00 0.00 C ATOM 376 O ALA 103 -7.133 -8.931 16.979 1.00 0.00 O ATOM 377 N LYS 104 -7.863 -6.897 17.467 1.00 0.00 N ATOM 378 CA LYS 104 -8.916 -7.512 18.279 1.00 0.00 C ATOM 379 C LYS 104 -9.848 -8.302 17.358 1.00 0.00 C ATOM 380 O LYS 104 -10.338 -9.345 17.736 1.00 0.00 O ATOM 381 N SER 105 -10.029 -7.846 16.130 1.00 0.00 N ATOM 382 CA SER 105 -10.819 -8.607 15.157 1.00 0.00 C ATOM 383 C SER 105 -10.148 -9.941 14.747 1.00 0.00 C ATOM 384 O SER 105 -10.815 -10.911 14.384 1.00 0.00 O ATOM 385 N ILE 106 -8.824 -9.997 14.822 1.00 0.00 N ATOM 386 CA ILE 106 -8.082 -11.210 14.498 1.00 0.00 C ATOM 387 C ILE 106 -8.154 -12.213 15.651 1.00 0.00 C ATOM 388 O ILE 106 -7.568 -13.305 15.575 1.00 0.00 O ATOM 389 N GLY 107 -8.849 -11.844 16.721 1.00 0.00 N ATOM 390 CA GLY 107 -8.953 -12.703 17.896 1.00 0.00 C ATOM 391 C GLY 107 -8.031 -12.320 19.044 1.00 0.00 C ATOM 392 O GLY 107 -8.087 -12.963 20.078 1.00 0.00 O ATOM 393 N LEU 108 -7.185 -11.286 18.900 1.00 0.00 N ATOM 394 CA LEU 108 -6.335 -10.869 20.033 1.00 0.00 C ATOM 395 C LEU 108 -7.190 -10.027 20.998 1.00 0.00 C ATOM 396 O LEU 108 -7.739 -8.987 20.611 1.00 0.00 O ATOM 397 N ASP 109 -7.296 -10.476 22.239 1.00 0.00 N ATOM 398 CA ASP 109 -8.004 -9.751 23.291 1.00 0.00 C ATOM 399 C ASP 109 -7.284 -8.472 23.664 1.00 0.00 C ATOM 400 O ASP 109 -6.072 -8.425 23.643 1.00 0.00 O ATOM 401 N ASP 110 -8.049 -7.475 24.101 1.00 0.00 N ATOM 402 CA ASP 110 -7.516 -6.162 24.475 1.00 0.00 C ATOM 403 C ASP 110 -6.497 -6.155 25.598 1.00 0.00 C ATOM 404 O ASP 110 -5.514 -5.410 25.570 1.00 0.00 O ATOM 405 N GLN 111 -6.725 -7.008 26.579 1.00 0.00 N ATOM 406 CA GLN 111 -5.868 -7.054 27.766 1.00 0.00 C ATOM 407 C GLN 111 -4.459 -7.517 27.369 1.00 0.00 C ATOM 408 O GLN 111 -3.481 -7.167 28.037 1.00 0.00 O ATOM 409 N THR 112 -4.386 -8.317 26.293 1.00 0.00 N ATOM 410 CA THR 112 -3.127 -8.841 25.755 1.00 0.00 C ATOM 411 C THR 112 -2.473 -7.837 24.828 1.00 0.00 C ATOM 412 O THR 112 -1.252 -7.730 24.824 1.00 0.00 O ATOM 413 N ALA 113 -3.279 -7.107 24.046 1.00 0.00 N ATOM 414 CA ALA 113 -2.771 -5.952 23.295 1.00 0.00 C ATOM 415 C ALA 113 -2.117 -4.965 24.289 1.00 0.00 C ATOM 416 O ALA 113 -1.067 -4.413 24.002 1.00 0.00 O ATOM 417 N ILE 114 -2.717 -4.760 25.464 1.00 0.00 N ATOM 418 CA ILE 114 -2.128 -3.880 26.467 1.00 0.00 C ATOM 419 C ILE 114 -0.748 -4.364 26.860 1.00 0.00 C ATOM 420 O ILE 114 0.219 -3.598 26.838 1.00 0.00 O ATOM 421 N GLU 115 -0.672 -5.645 27.213 1.00 0.00 N ATOM 422 CA GLU 115 0.597 -6.323 27.576 1.00 0.00 C ATOM 423 C GLU 115 1.659 -6.192 26.480 1.00 0.00 C ATOM 424 O GLU 115 2.773 -5.775 26.740 1.00 0.00 O ATOM 425 N LEU 116 1.274 -6.514 25.250 1.00 0.00 N ATOM 426 CA LEU 116 2.156 -6.460 24.095 1.00 0.00 C ATOM 427 C LEU 116 2.697 -5.060 23.885 1.00 0.00 C ATOM 428 O LEU 116 3.887 -4.870 23.700 1.00 0.00 O ATOM 429 N LEU 117 1.808 -4.071 23.911 1.00 0.00 N ATOM 430 CA LEU 117 2.179 -2.691 23.766 1.00 0.00 C ATOM 431 C LEU 117 3.155 -2.280 24.874 1.00 0.00 C ATOM 432 O LEU 117 4.157 -1.616 24.614 1.00 0.00 O ATOM 433 N ILE 118 2.885 -2.687 26.103 1.00 0.00 N ATOM 434 CA ILE 118 3.810 -2.385 27.203 1.00 0.00 C ATOM 435 C ILE 118 5.219 -2.981 26.992 1.00 0.00 C ATOM 436 O ILE 118 6.224 -2.323 27.277 1.00 0.00 O ATOM 437 N LYS 119 5.276 -4.218 26.484 1.00 0.00 N ATOM 438 CA LYS 119 6.531 -4.852 26.045 1.00 0.00 C ATOM 439 C LYS 119 7.214 -4.078 24.938 1.00 0.00 C ATOM 440 O LYS 119 8.403 -3.844 25.011 1.00 0.00 O ATOM 441 N ARG 120 6.466 -3.720 23.892 1.00 0.00 N ATOM 442 CA ARG 120 7.013 -2.948 22.767 1.00 0.00 C ATOM 443 C ARG 120 7.596 -1.619 23.228 1.00 0.00 C ATOM 444 O ARG 120 8.531 -1.129 22.605 1.00 0.00 O ATOM 445 N SER 121 7.046 -1.037 24.297 1.00 0.00 N ATOM 446 CA SER 121 7.466 0.277 24.806 1.00 0.00 C ATOM 447 C SER 121 8.559 0.212 25.902 1.00 0.00 C ATOM 448 O SER 121 9.147 1.253 26.263 1.00 0.00 O ATOM 449 N ARG 122 8.816 -0.977 26.454 1.00 0.00 N ATOM 450 CA ARG 122 9.801 -1.135 27.539 1.00 0.00 C ATOM 451 C ARG 122 11.271 -0.990 27.146 1.00 0.00 C ATOM 452 O ARG 122 11.636 -1.017 25.956 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 452 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 21.81 96.0 224 94.9 236 ARMSMC SECONDARY STRUCTURE . . 9.19 99.4 160 100.0 160 ARMSMC SURFACE . . . . . . . . 24.87 94.5 164 93.2 176 ARMSMC BURIED . . . . . . . . 9.23 100.0 60 100.0 60 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 102 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 97 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 71 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 77 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 25 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 83 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 68 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 58 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 65 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 38 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 33 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 30 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 19 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 14 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.92 (Number of atoms: 113) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.92 113 95.0 119 CRMSCA CRN = ALL/NP . . . . . 0.0170 CRMSCA SECONDARY STRUCTURE . . 1.96 80 100.0 80 CRMSCA SURFACE . . . . . . . . 2.13 83 93.3 89 CRMSCA BURIED . . . . . . . . 1.20 30 100.0 30 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.86 452 76.9 588 CRMSMC SECONDARY STRUCTURE . . 1.88 320 80.4 398 CRMSMC SURFACE . . . . . . . . 2.04 332 75.5 440 CRMSMC BURIED . . . . . . . . 1.25 120 81.1 148 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 477 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 425 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 335 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 355 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 122 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 1.86 452 47.4 953 CRMSALL SECONDARY STRUCTURE . . 1.88 320 48.9 655 CRMSALL SURFACE . . . . . . . . 2.04 332 46.7 711 CRMSALL BURIED . . . . . . . . 1.25 120 49.6 242 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.649 1.000 0.500 113 95.0 119 ERRCA SECONDARY STRUCTURE . . 1.692 1.000 0.500 80 100.0 80 ERRCA SURFACE . . . . . . . . 1.864 1.000 0.500 83 93.3 89 ERRCA BURIED . . . . . . . . 1.054 1.000 0.500 30 100.0 30 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.611 1.000 0.500 452 76.9 588 ERRMC SECONDARY STRUCTURE . . 1.644 1.000 0.500 320 80.4 398 ERRMC SURFACE . . . . . . . . 1.799 1.000 0.500 332 75.5 440 ERRMC BURIED . . . . . . . . 1.088 1.000 0.500 120 81.1 148 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 477 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 425 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 335 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 355 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 122 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.611 1.000 0.500 452 47.4 953 ERRALL SECONDARY STRUCTURE . . 1.644 1.000 0.500 320 48.9 655 ERRALL SURFACE . . . . . . . . 1.799 1.000 0.500 332 46.7 711 ERRALL BURIED . . . . . . . . 1.088 1.000 0.500 120 49.6 242 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 29 81 104 112 113 113 119 DISTCA CA (P) 24.37 68.07 87.39 94.12 94.96 119 DISTCA CA (RMS) 0.64 1.26 1.61 1.85 1.92 DISTCA ALL (N) 125 331 418 450 452 452 953 DISTALL ALL (P) 13.12 34.73 43.86 47.22 47.43 953 DISTALL ALL (RMS) 0.67 1.27 1.59 1.81 1.86 DISTALL END of the results output