####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 116 ( 464), selected 116 , name T0582TS328_1-D1 # Molecule2: number of CA atoms 121 ( 947), selected 116 , name T0582-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0582TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 97 - 122 4.99 25.70 LCS_AVERAGE: 16.73 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 52 - 64 1.99 27.68 LCS_AVERAGE: 7.20 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 47 - 53 0.90 29.73 LONGEST_CONTINUOUS_SEGMENT: 7 83 - 89 0.79 32.55 LONGEST_CONTINUOUS_SEGMENT: 7 103 - 109 0.94 23.85 LCS_AVERAGE: 4.17 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 116 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT F 7 F 7 6 10 15 3 4 6 8 8 10 11 12 13 16 18 19 20 22 24 27 30 34 38 41 LCS_GDT T 8 T 8 6 11 15 3 6 7 10 10 11 13 13 15 16 18 19 20 22 24 27 30 34 38 41 LCS_GDT K 9 K 9 6 11 15 5 6 7 10 10 11 13 13 15 16 18 19 20 22 24 27 30 34 38 41 LCS_GDT P 10 P 10 6 11 15 5 6 7 10 10 11 13 13 15 16 18 19 20 22 24 27 30 31 34 37 LCS_GDT V 11 V 11 6 11 15 5 6 7 10 10 11 13 13 15 16 18 19 20 22 24 27 30 34 38 41 LCS_GDT V 12 V 12 6 11 15 5 6 7 10 10 11 13 13 15 16 18 19 20 22 24 27 29 30 33 35 LCS_GDT I 13 I 13 6 11 18 5 6 7 10 10 11 13 13 15 16 18 19 20 25 26 31 35 39 45 49 LCS_GDT D 14 D 14 5 11 18 2 4 5 8 9 11 13 13 15 16 18 19 24 26 29 32 35 42 45 50 LCS_GDT T 15 T 15 5 11 18 3 4 6 10 10 11 13 14 16 19 21 23 25 29 34 39 44 46 48 52 LCS_GDT D 16 D 16 5 11 18 4 5 7 10 10 11 13 14 16 19 21 23 25 29 32 38 44 46 47 52 LCS_GDT Q 17 Q 17 4 11 18 4 4 5 10 10 11 13 14 16 19 21 26 29 33 38 39 44 46 48 52 LCS_GDT L 18 L 18 4 11 18 4 4 5 8 9 11 13 14 16 19 21 26 29 33 38 39 44 46 48 52 LCS_GDT E 19 E 19 4 8 18 4 4 5 8 9 10 12 14 16 19 21 26 29 33 38 39 44 46 48 52 LCS_GDT W 20 W 20 4 8 18 3 4 5 6 8 10 12 14 16 19 21 26 29 33 38 39 44 46 48 52 LCS_GDT R 21 R 21 4 8 18 3 4 5 8 9 10 12 14 16 19 21 25 29 33 38 39 44 46 48 52 LCS_GDT P 22 P 22 4 8 18 3 4 5 8 9 10 12 14 18 22 26 26 29 33 38 39 44 46 49 52 LCS_GDT S 23 S 23 4 7 18 3 3 5 7 8 10 15 17 19 22 26 26 28 30 34 38 43 45 49 52 LCS_GDT P 24 P 24 4 6 18 3 3 4 7 9 12 14 15 18 20 23 24 26 28 32 38 43 45 49 51 LCS_GDT M 25 M 25 4 6 18 3 3 4 6 10 10 13 14 15 19 21 23 29 33 38 39 44 46 49 52 LCS_GDT K 26 K 26 3 6 18 3 4 5 7 8 10 13 13 14 19 21 26 29 33 38 39 44 46 49 52 LCS_GDT G 27 G 27 3 6 18 3 3 4 6 9 10 11 12 13 18 20 26 29 33 38 39 44 46 48 52 LCS_GDT V 28 V 28 3 6 18 3 3 4 8 9 10 11 12 14 19 20 26 29 33 38 39 44 46 48 52 LCS_GDT E 29 E 29 3 6 18 0 3 3 4 7 10 13 13 13 19 21 26 29 33 38 39 44 46 49 52 LCS_GDT R 30 R 30 3 3 18 3 3 3 3 3 6 9 11 12 12 17 20 23 28 33 39 44 46 48 52 LCS_GDT R 31 R 31 3 3 18 3 3 3 3 3 4 9 11 12 12 13 16 22 24 30 34 35 42 45 49 LCS_GDT M 32 M 32 3 4 18 3 3 4 6 8 10 12 14 16 19 21 24 29 30 34 39 44 46 48 52 LCS_GDT L 33 L 33 3 4 14 3 3 4 10 10 11 12 13 16 19 21 24 29 30 33 39 44 46 48 52 LCS_GDT D 34 D 34 3 4 14 3 3 4 6 8 10 12 13 16 19 21 24 29 30 33 36 44 46 48 52 LCS_GDT R 35 R 35 3 4 14 1 3 4 4 5 10 11 12 16 19 21 24 29 30 35 39 44 46 48 52 LCS_GDT I 36 I 36 3 4 14 1 3 3 4 5 6 8 8 9 11 14 20 24 30 38 39 44 46 48 52 LCS_GDT G 37 G 37 5 7 18 3 5 5 6 6 6 8 8 9 11 20 25 29 33 38 39 44 46 48 52 LCS_GDT G 38 G 38 5 7 18 3 5 5 6 6 6 8 9 13 19 22 26 29 33 38 39 44 46 48 52 LCS_GDT E 39 E 39 5 7 18 3 5 5 6 7 8 11 14 20 21 23 24 29 33 38 39 42 44 46 49 LCS_GDT V 40 V 40 6 7 18 4 5 6 11 12 14 15 16 19 21 23 24 27 28 30 33 36 40 43 47 LCS_GDT A 41 A 41 6 7 18 4 5 6 11 12 14 15 17 20 21 23 24 27 28 38 39 41 44 46 50 LCS_GDT R 42 R 42 6 8 18 4 4 6 11 12 14 15 18 20 21 23 26 29 33 38 39 42 46 48 52 LCS_GDT A 43 A 43 6 9 18 4 4 6 11 12 14 15 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT T 44 T 44 6 10 18 3 4 6 11 12 14 15 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT S 45 S 45 6 10 18 3 4 6 11 12 14 15 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT I 46 I 46 6 10 18 3 5 6 9 11 12 13 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT V 47 V 47 7 10 18 3 5 7 9 11 14 15 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT R 48 R 48 7 10 18 3 5 7 9 11 12 13 18 20 21 23 26 28 33 38 39 44 46 48 52 LCS_GDT Y 49 Y 49 7 10 18 4 5 7 9 11 12 15 18 20 21 23 24 27 29 34 38 42 46 48 52 LCS_GDT A 50 A 50 7 10 18 3 5 7 9 11 12 13 18 20 21 23 24 27 30 36 38 44 46 48 52 LCS_GDT P 51 P 51 7 10 18 4 5 7 9 11 12 13 16 19 21 23 24 25 26 30 36 40 44 47 52 LCS_GDT G 52 G 52 7 13 18 4 5 7 10 12 14 15 18 20 21 23 24 27 28 34 38 43 44 48 52 LCS_GDT S 53 S 53 7 13 18 4 5 7 9 10 13 15 15 18 21 22 24 27 29 33 38 43 44 49 52 LCS_GDT R 54 R 54 6 13 18 4 5 6 10 11 12 13 14 15 15 17 18 20 23 26 29 33 36 40 45 LCS_GDT F 55 F 55 6 13 18 4 5 6 10 11 12 13 14 15 15 17 18 20 21 24 28 32 37 40 45 LCS_GDT S 56 S 56 6 13 18 4 6 7 10 11 12 13 14 15 15 17 18 20 21 24 25 28 32 34 40 LCS_GDT A 57 A 57 6 13 18 4 6 7 8 10 12 13 14 15 15 17 18 20 21 24 25 29 33 39 42 LCS_GDT H 58 H 58 6 13 18 4 6 7 10 11 12 13 14 15 15 17 18 20 21 25 29 34 38 41 46 LCS_GDT T 59 T 59 6 13 18 4 6 7 10 11 12 13 14 15 15 17 18 20 22 25 29 35 40 43 49 LCS_GDT H 60 H 60 6 13 18 3 6 7 10 11 12 13 14 15 15 20 26 29 33 38 39 44 46 48 52 LCS_GDT D 61 D 61 6 13 18 3 6 7 10 11 12 13 14 15 15 20 26 29 33 38 39 42 45 48 52 LCS_GDT G 62 G 62 5 13 18 3 5 6 10 11 12 13 14 15 19 21 26 29 33 38 39 44 46 48 52 LCS_GDT G 63 G 63 5 13 18 3 5 6 10 11 12 13 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT E 64 E 64 5 13 18 3 5 6 9 11 12 13 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT E 65 E 65 5 9 18 3 4 6 11 12 14 15 18 20 21 23 24 29 32 38 39 44 46 48 52 LCS_GDT F 66 F 66 5 9 18 3 4 6 11 12 14 15 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT I 67 I 67 5 9 16 3 4 6 8 11 14 15 18 20 21 23 24 29 33 38 39 44 46 48 52 LCS_GDT V 68 V 68 3 9 16 3 3 6 11 12 14 15 18 20 21 23 26 29 33 38 39 44 46 48 52 LCS_GDT L 69 L 69 4 9 16 3 4 6 8 9 10 11 14 19 20 23 24 29 33 38 39 44 46 48 52 LCS_GDT D 70 D 70 4 9 22 3 4 5 11 12 14 15 18 20 21 23 25 29 33 38 39 44 46 49 52 LCS_GDT G 71 G 71 6 9 22 4 5 6 7 9 10 12 14 16 22 26 26 29 33 38 39 44 46 49 52 LCS_GDT V 72 V 72 6 8 22 4 5 6 7 9 10 12 14 16 22 26 26 29 33 38 39 44 46 49 52 LCS_GDT F 73 F 73 6 8 22 4 5 6 7 9 10 13 17 18 22 26 26 28 32 34 38 43 45 49 52 LCS_GDT Q 74 Q 74 6 8 22 4 5 6 7 9 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT D 75 D 75 6 8 22 3 5 6 7 9 10 15 17 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT E 76 E 76 6 8 22 3 5 6 7 9 10 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT H 77 H 77 5 8 22 4 4 5 7 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT G 78 G 78 5 10 22 4 4 6 9 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT D 79 D 79 5 10 22 4 5 6 9 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT Y 80 Y 80 4 10 22 4 4 5 7 8 10 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT P 81 P 81 4 10 22 4 5 6 9 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT A 82 A 82 4 10 22 4 5 6 9 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT G 83 G 83 7 10 22 4 6 7 9 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT T 84 T 84 7 10 22 4 6 7 9 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT Y 85 Y 85 7 10 22 4 6 7 9 11 12 15 18 19 22 26 26 28 32 34 38 41 45 49 51 LCS_GDT V 86 V 86 7 10 22 4 6 7 9 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT R 87 R 87 7 10 22 4 6 7 9 11 12 15 18 19 22 26 26 28 32 34 36 41 45 49 51 LCS_GDT N 88 N 88 7 9 22 3 6 7 8 10 13 16 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT P 89 P 89 7 9 22 3 6 7 7 10 14 16 18 19 22 26 26 28 32 34 36 41 45 49 51 LCS_GDT P 90 P 90 3 9 22 3 3 4 8 10 13 15 18 19 21 24 26 28 32 34 38 43 45 49 51 LCS_GDT T 91 T 91 5 7 22 4 4 5 6 10 14 16 18 18 18 21 23 27 32 34 38 43 45 49 51 LCS_GDT T 92 T 92 5 9 22 4 4 6 8 11 14 16 18 18 18 21 23 27 32 34 38 43 45 49 51 LCS_GDT S 93 S 93 5 9 18 4 4 5 8 11 14 16 18 18 18 19 20 23 29 33 36 38 43 46 49 LCS_GDT H 94 H 94 5 9 18 4 4 5 6 11 14 16 18 18 18 19 19 22 25 29 33 36 40 41 44 LCS_GDT V 95 V 95 5 9 18 2 3 5 8 11 14 16 18 18 18 19 19 21 23 25 27 31 38 41 42 LCS_GDT P 96 P 96 5 9 18 5 5 6 8 11 14 16 18 18 18 19 23 25 29 33 38 41 45 49 51 LCS_GDT G 97 G 97 5 9 26 5 5 6 8 11 14 16 18 18 18 23 24 26 32 34 38 43 45 49 52 LCS_GDT S 98 S 98 5 9 26 5 5 6 8 11 14 16 18 19 22 26 26 29 33 36 38 44 46 49 52 LCS_GDT A 99 A 99 5 9 26 5 5 7 8 11 14 16 18 18 18 22 26 29 33 38 39 44 46 49 52 LCS_GDT E 100 E 100 5 9 26 5 5 6 11 12 14 16 18 20 21 24 26 29 33 38 39 44 46 49 52 LCS_GDT G 101 G 101 4 9 26 3 4 5 8 11 14 16 18 18 19 24 26 29 33 38 39 44 46 49 52 LCS_GDT C 102 C 102 4 9 26 3 4 5 8 10 13 16 18 18 19 20 26 28 30 34 38 43 45 49 52 LCS_GDT T 103 T 103 7 9 26 3 5 6 8 10 12 12 13 16 22 26 26 28 31 34 38 43 45 49 51 LCS_GDT I 104 I 104 7 9 26 3 6 6 8 11 12 15 17 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT F 105 F 105 7 9 26 3 6 6 8 11 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT V 106 V 106 7 9 26 4 6 6 8 10 12 15 18 19 22 26 26 28 32 34 38 43 45 49 51 LCS_GDT K 107 K 107 7 9 26 4 6 6 8 8 10 12 14 16 20 23 25 28 32 34 38 43 45 49 51 LCS_GDT L 108 L 108 7 9 26 4 6 6 8 8 10 12 14 16 19 21 23 27 32 34 38 43 45 49 51 LCS_GDT W 109 W 109 7 9 26 4 6 6 8 8 10 12 15 16 19 20 23 24 28 32 38 41 44 49 50 LCS_GDT Q 110 Q 110 3 7 26 3 4 4 5 8 10 12 13 16 19 20 23 26 29 33 38 43 45 49 51 LCS_GDT F 111 F 111 3 7 26 3 4 5 7 8 9 12 14 16 19 20 23 24 29 33 38 43 45 49 51 LCS_GDT D 112 D 112 3 7 26 3 4 4 7 8 9 12 14 16 18 20 23 24 26 31 37 41 44 49 51 LCS_GDT P 113 P 113 3 6 26 3 3 5 7 8 9 12 14 16 19 20 23 24 28 33 38 43 45 49 51 LCS_GDT A 114 A 114 4 6 26 3 4 4 5 6 9 12 14 16 18 19 20 23 26 28 35 40 44 49 51 LCS_GDT D 115 D 115 4 6 26 3 4 4 5 5 6 8 13 15 18 20 23 24 28 32 37 43 45 49 51 LCS_GDT R 116 R 116 4 6 26 3 4 4 5 6 6 9 13 15 16 19 22 24 26 27 31 34 41 47 51 LCS_GDT T 117 T 117 4 6 26 3 4 4 5 6 7 10 13 16 19 20 23 24 25 27 29 31 34 37 44 LCS_GDT Q 118 Q 118 3 6 26 3 3 4 5 10 14 16 18 18 19 20 23 24 25 27 30 33 38 44 49 LCS_GDT F 119 F 119 3 4 26 3 3 3 5 11 14 16 18 18 19 20 23 24 25 27 30 33 38 44 49 LCS_GDT S 120 S 120 3 4 26 0 3 3 6 11 14 16 18 18 19 20 23 24 25 27 29 30 33 34 40 LCS_GDT K 121 K 121 3 3 26 0 3 3 3 7 13 15 16 18 19 20 23 24 25 27 29 30 33 34 35 LCS_GDT N 122 N 122 3 3 26 0 3 3 3 3 8 11 13 15 17 20 23 24 25 27 29 30 33 34 35 LCS_AVERAGE LCS_A: 9.37 ( 4.17 7.20 16.73 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 7 11 12 14 16 18 20 22 26 26 29 33 38 39 44 46 49 52 GDT PERCENT_AT 4.13 4.96 5.79 9.09 9.92 11.57 13.22 14.88 16.53 18.18 21.49 21.49 23.97 27.27 31.40 32.23 36.36 38.02 40.50 42.98 GDT RMS_LOCAL 0.19 0.47 0.73 1.52 1.73 1.95 2.46 2.68 3.24 3.40 3.97 3.97 4.75 5.20 5.55 5.63 7.75 6.28 7.00 7.01 GDT RMS_ALL_AT 31.25 36.68 34.15 23.00 23.14 23.18 29.50 29.66 22.73 22.36 21.99 21.99 20.35 22.84 22.68 22.62 21.63 21.64 20.13 21.19 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA F 7 F 7 45.586 7 0.672 0.672 47.243 0.000 0.000 LGA T 8 T 8 44.369 3 0.188 0.188 45.292 0.000 0.000 LGA K 9 K 9 42.865 5 0.075 0.075 43.635 0.000 0.000 LGA P 10 P 10 40.892 3 0.110 0.110 41.460 0.000 0.000 LGA V 11 V 11 39.649 3 0.106 0.106 40.225 0.000 0.000 LGA V 12 V 12 37.119 3 0.134 0.134 37.916 0.000 0.000 LGA I 13 I 13 36.904 4 0.458 0.458 36.999 0.000 0.000 LGA D 14 D 14 34.878 4 0.143 0.143 36.980 0.000 0.000 LGA T 15 T 15 36.049 3 0.655 0.655 36.049 0.000 0.000 LGA D 16 D 16 33.674 4 0.477 0.477 34.673 0.000 0.000 LGA Q 17 Q 17 32.838 5 0.037 0.037 33.469 0.000 0.000 LGA L 18 L 18 32.813 4 0.030 0.030 32.875 0.000 0.000 LGA E 19 E 19 31.396 5 0.227 0.227 31.865 0.000 0.000 LGA W 20 W 20 28.321 10 0.128 0.128 29.063 0.000 0.000 LGA R 21 R 21 28.489 7 0.092 0.092 28.969 0.000 0.000 LGA P 22 P 22 29.034 3 0.057 0.057 29.034 0.000 0.000 LGA S 23 S 23 26.053 2 0.607 0.607 27.021 0.000 0.000 LGA P 24 P 24 26.498 3 0.617 0.617 26.718 0.000 0.000 LGA M 25 M 25 25.832 4 0.672 0.672 27.160 0.000 0.000 LGA K 26 K 26 27.869 5 0.249 0.249 27.869 0.000 0.000 LGA G 27 G 27 28.554 0 0.347 0.347 28.554 0.000 0.000 LGA V 28 V 28 29.424 3 0.606 0.606 32.382 0.000 0.000 LGA E 29 E 29 29.506 5 0.655 0.655 30.762 0.000 0.000 LGA R 30 R 30 33.727 7 0.547 0.547 37.554 0.000 0.000 LGA R 31 R 31 37.280 7 0.558 0.558 38.560 0.000 0.000 LGA M 32 M 32 38.842 4 0.531 0.531 41.624 0.000 0.000 LGA L 33 L 33 41.694 4 0.022 0.022 46.324 0.000 0.000 LGA D 34 D 34 47.297 4 0.625 0.625 48.273 0.000 0.000 LGA R 35 R 35 49.346 7 0.619 0.619 52.790 0.000 0.000 LGA I 36 I 36 52.224 4 0.571 0.571 54.280 0.000 0.000 LGA G 37 G 37 57.444 0 0.553 0.553 59.334 0.000 0.000 LGA G 38 G 38 60.861 0 0.250 0.250 60.861 0.000 0.000 LGA E 39 E 39 58.824 5 0.085 0.085 59.474 0.000 0.000 LGA V 40 V 40 56.020 3 0.561 0.561 56.999 0.000 0.000 LGA A 41 A 41 54.146 1 0.159 0.159 54.415 0.000 0.000 LGA R 42 R 42 55.233 7 0.591 0.591 55.233 0.000 0.000 LGA A 43 A 43 49.844 1 0.054 0.054 51.436 0.000 0.000 LGA T 44 T 44 46.264 3 0.640 0.640 47.886 0.000 0.000 LGA S 45 S 45 40.272 2 0.178 0.178 42.457 0.000 0.000 LGA I 46 I 46 34.591 4 0.086 0.086 36.619 0.000 0.000 LGA V 47 V 47 29.776 3 0.110 0.110 31.560 0.000 0.000 LGA R 48 R 48 24.362 7 0.076 0.076 26.119 0.000 0.000 LGA Y 49 Y 49 20.983 8 0.086 0.086 22.126 0.000 0.000 LGA A 50 A 50 17.873 1 0.095 0.095 18.812 0.000 0.000 LGA P 51 P 51 16.043 3 0.578 0.578 17.078 0.000 0.000 LGA G 52 G 52 15.807 0 0.061 0.061 15.807 0.000 0.000 LGA S 53 S 53 16.423 2 0.220 0.220 19.018 0.000 0.000 LGA R 54 R 54 20.556 7 0.061 0.061 21.488 0.000 0.000 LGA F 55 F 55 24.433 7 0.072 0.072 27.441 0.000 0.000 LGA S 56 S 56 29.787 2 0.143 0.143 30.142 0.000 0.000 LGA A 57 A 57 32.567 1 0.017 0.017 36.404 0.000 0.000 LGA H 58 H 58 36.923 6 0.149 0.149 37.898 0.000 0.000 LGA T 59 T 59 41.708 3 0.215 0.215 43.911 0.000 0.000 LGA H 60 H 60 42.972 6 0.263 0.263 46.215 0.000 0.000 LGA D 61 D 61 49.983 4 0.052 0.052 52.284 0.000 0.000 LGA G 62 G 62 49.619 0 0.074 0.074 49.619 0.000 0.000 LGA G 63 G 63 45.080 0 0.650 0.650 46.643 0.000 0.000 LGA E 64 E 64 38.622 5 0.173 0.173 40.952 0.000 0.000 LGA E 65 E 65 35.363 5 0.110 0.110 36.405 0.000 0.000 LGA F 66 F 66 31.462 7 0.164 0.164 32.951 0.000 0.000 LGA I 67 I 67 26.745 4 0.312 0.312 28.333 0.000 0.000 LGA V 68 V 68 20.905 3 0.223 0.223 22.585 0.000 0.000 LGA L 69 L 69 19.030 4 0.641 0.641 19.625 0.000 0.000 LGA D 70 D 70 16.952 4 0.065 0.065 17.290 0.000 0.000 LGA G 71 G 71 13.572 0 0.164 0.164 15.094 0.000 0.000 LGA V 72 V 72 11.973 3 0.080 0.080 11.973 0.714 0.408 LGA F 73 F 73 12.007 7 0.145 0.145 14.468 0.000 0.000 LGA Q 74 Q 74 11.639 5 0.020 0.020 11.639 0.714 0.317 LGA D 75 D 75 12.397 4 0.139 0.139 16.382 0.000 0.000 LGA E 76 E 76 17.450 5 0.009 0.009 21.891 0.000 0.000 LGA H 77 H 77 21.317 6 0.586 0.586 21.799 0.000 0.000 LGA G 78 G 78 23.231 0 0.323 0.323 23.231 0.000 0.000 LGA D 79 D 79 21.960 4 0.050 0.050 22.264 0.000 0.000 LGA Y 80 Y 80 20.369 8 0.212 0.212 21.496 0.000 0.000 LGA P 81 P 81 22.144 3 0.091 0.091 22.144 0.000 0.000 LGA A 82 A 82 23.481 1 0.653 0.653 23.790 0.000 0.000 LGA G 83 G 83 24.619 0 0.589 0.589 25.368 0.000 0.000 LGA T 84 T 84 20.297 3 0.052 0.052 21.171 0.000 0.000 LGA Y 85 Y 85 19.016 8 0.130 0.130 19.878 0.000 0.000 LGA V 86 V 86 12.303 3 0.062 0.062 14.528 0.000 0.000 LGA R 87 R 87 9.775 7 0.081 0.081 11.011 3.095 1.126 LGA N 88 N 88 3.865 4 0.305 0.305 5.648 39.524 19.762 LGA P 89 P 89 2.729 3 0.648 0.648 4.923 48.929 27.959 LGA P 90 P 90 4.069 3 0.670 0.670 4.069 52.262 29.864 LGA T 91 T 91 3.235 3 0.696 0.696 3.968 52.381 29.932 LGA T 92 T 92 1.898 3 0.120 0.120 2.874 77.738 44.422 LGA S 93 S 93 1.020 2 0.035 0.035 3.171 75.833 50.556 LGA H 94 H 94 2.392 6 0.131 0.131 3.405 65.119 26.048 LGA V 95 V 95 1.556 3 0.219 0.219 3.372 69.286 39.592 LGA P 96 P 96 2.439 3 0.074 0.074 2.678 60.952 34.830 LGA G 97 G 97 2.276 0 0.059 0.059 2.312 64.762 64.762 LGA S 98 S 98 2.257 2 0.134 0.134 2.257 66.786 44.524 LGA A 99 A 99 2.194 1 0.342 0.342 3.281 61.071 48.857 LGA E 100 E 100 2.143 5 0.265 0.265 2.153 70.952 31.534 LGA G 101 G 101 2.857 0 0.038 0.038 2.857 64.881 64.881 LGA C 102 C 102 3.425 2 0.112 0.112 6.662 37.381 24.921 LGA T 103 T 103 9.716 3 0.061 0.061 10.585 1.905 1.088 LGA I 104 I 104 11.142 4 0.124 0.124 14.370 0.000 0.000 LGA F 105 F 105 17.338 7 0.138 0.138 17.338 0.000 0.000 LGA V 106 V 106 17.310 3 0.007 0.007 21.023 0.000 0.000 LGA K 107 K 107 22.132 5 0.062 0.062 22.132 0.000 0.000 LGA L 108 L 108 22.494 4 0.030 0.030 26.922 0.000 0.000 LGA W 109 W 109 26.447 10 0.369 0.369 30.396 0.000 0.000 LGA Q 110 Q 110 28.290 5 0.513 0.513 28.290 0.000 0.000 LGA F 111 F 111 25.040 7 0.635 0.635 26.223 0.000 0.000 LGA D 112 D 112 26.546 4 0.678 0.678 26.546 0.000 0.000 LGA P 113 P 113 22.973 3 0.113 0.113 24.720 0.000 0.000 LGA A 114 A 114 19.194 1 0.654 0.654 20.900 0.000 0.000 LGA D 115 D 115 13.270 4 0.372 0.372 15.398 0.000 0.000 LGA R 116 R 116 12.098 7 0.258 0.258 12.558 0.119 0.043 LGA T 117 T 117 7.941 3 0.621 0.621 9.693 10.595 6.054 LGA Q 118 Q 118 2.534 5 0.615 0.615 3.893 56.310 25.026 LGA F 119 F 119 3.136 7 0.600 0.600 3.136 61.429 22.338 LGA S 120 S 120 2.398 2 0.538 0.538 5.937 47.024 31.349 LGA K 121 K 121 5.597 5 0.642 0.642 7.644 18.929 8.413 LGA N 122 N 122 12.232 4 0.639 0.639 14.497 0.119 0.060 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 116 464 464 100.00 909 464 51.05 121 SUMMARY(RMSD_GDC): 15.421 15.373 15.373 9.164 5.609 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 116 121 4.0 18 2.68 15.289 13.056 0.646 LGA_LOCAL RMSD: 2.684 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 29.656 Number of assigned atoms: 116 Std_ASGN_ATOMS RMSD: 15.421 Standard rmsd on all 116 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.694749 * X + -0.065950 * Y + -0.716222 * Z + 111.798859 Y_new = 0.681350 * X + 0.258642 * Y + -0.684738 * Z + -4.505539 Z_new = 0.230403 * X + -0.963719 * Y + -0.134756 * Z + 47.374744 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.365931 -0.232492 -1.709725 [DEG: 135.5579 -13.3208 -97.9600 ] ZXZ: -0.807868 1.705963 2.906920 [DEG: -46.2874 97.7445 166.5543 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0582TS328_1-D1 REMARK 2: T0582-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0582TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 116 121 4.0 18 2.68 13.056 15.42 REMARK ---------------------------------------------------------- MOLECULE T0582TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0582 REMARK MODEL 1 REMARK PARENT 2q9j_A ATOM 1 N PHE 7 69.249 -11.290 43.265 1.00 3.00 N ATOM 2 CA PHE 7 69.866 -10.376 42.307 1.00 3.00 C ATOM 3 C PHE 7 68.899 -9.498 41.550 1.00 3.00 C ATOM 4 O PHE 7 67.743 -9.880 41.348 1.00 3.00 O ATOM 5 N THR 8 69.357 -8.323 41.139 1.00 3.00 N ATOM 6 CA THR 8 68.531 -7.433 40.327 1.00 3.00 C ATOM 7 C THR 8 68.448 -7.959 38.898 1.00 3.00 C ATOM 8 O THR 8 67.365 -8.002 38.281 1.00 3.00 O ATOM 9 N LYS 9 69.599 -8.385 38.381 1.00 3.00 N ATOM 10 CA LYS 9 69.699 -8.905 37.033 1.00 3.00 C ATOM 11 C LYS 9 70.635 -10.102 36.853 1.00 3.00 C ATOM 12 O LYS 9 71.593 -10.313 37.626 1.00 3.00 O ATOM 13 N PRO 10 70.346 -10.882 35.825 1.00 3.00 N ATOM 14 CA PRO 10 71.115 -12.027 35.463 1.00 3.00 C ATOM 15 C PRO 10 71.808 -11.792 34.148 1.00 3.00 C ATOM 16 O PRO 10 71.154 -11.445 33.138 1.00 3.00 O ATOM 17 N VAL 11 73.120 -11.950 34.132 1.00 3.00 N ATOM 18 CA VAL 11 73.864 -11.753 32.906 1.00 3.00 C ATOM 19 C VAL 11 74.527 -13.016 32.394 1.00 3.00 C ATOM 20 O VAL 11 75.321 -13.673 33.106 1.00 3.00 O ATOM 21 N VAL 12 74.200 -13.375 31.162 1.00 3.00 N ATOM 22 CA VAL 12 74.759 -14.548 30.553 1.00 3.00 C ATOM 23 C VAL 12 75.711 -14.247 29.422 1.00 3.00 C ATOM 24 O VAL 12 75.303 -13.661 28.406 1.00 3.00 O ATOM 25 N ILE 13 76.974 -14.631 29.594 1.00 3.00 N ATOM 26 CA ILE 13 77.974 -14.446 28.606 1.00 3.00 C ATOM 27 C ILE 13 78.953 -14.198 27.467 1.00 3.00 C ATOM 28 O ILE 13 78.992 -14.958 26.490 1.00 3.00 O ATOM 29 N ASP 14 79.746 -13.138 27.539 1.00 3.00 N ATOM 30 CA ASP 14 80.779 -12.907 26.515 1.00 3.00 C ATOM 31 C ASP 14 81.792 -14.032 26.373 1.00 3.00 C ATOM 32 O ASP 14 82.366 -14.478 27.374 1.00 3.00 O ATOM 33 N THR 15 82.013 -14.467 25.134 1.00 3.00 N ATOM 34 CA THR 15 83.069 -15.433 24.868 1.00 3.00 C ATOM 35 C THR 15 83.509 -15.273 23.411 1.00 3.00 C ATOM 36 O THR 15 82.636 -15.586 22.568 1.00 3.00 O ATOM 37 N ASP 16 84.721 -14.843 23.124 1.00 9.00 N ATOM 38 CA ASP 16 85.187 -14.851 21.794 1.00 9.00 C ATOM 39 C ASP 16 84.415 -13.924 20.884 1.00 9.00 C ATOM 40 O ASP 16 84.487 -12.724 21.054 1.00 9.00 O ATOM 41 N GLN 17 83.690 -14.476 19.881 1.00 3.00 N ATOM 42 CA GLN 17 82.808 -13.728 19.013 1.00 3.00 C ATOM 43 C GLN 17 81.405 -13.479 19.573 1.00 3.00 C ATOM 44 O GLN 17 80.734 -12.639 19.021 1.00 3.00 O ATOM 45 N LEU 18 80.979 -14.253 20.616 1.00 3.00 N ATOM 46 CA LEU 18 79.590 -14.220 21.055 1.00 3.00 C ATOM 47 C LEU 18 79.380 -13.255 22.197 1.00 3.00 C ATOM 48 O LEU 18 80.154 -13.142 23.147 1.00 3.00 O ATOM 49 N GLU 19 78.222 -12.582 22.149 1.00 3.00 N ATOM 50 CA GLU 19 77.748 -11.661 23.188 1.00 3.00 C ATOM 51 C GLU 19 76.330 -11.842 23.745 1.00 3.00 C ATOM 52 O GLU 19 75.680 -12.931 23.519 1.00 3.00 O ATOM 53 N TRP 20 75.880 -10.825 24.433 1.00 3.00 N ATOM 54 CA TRP 20 74.467 -10.781 25.031 1.00 3.00 C ATOM 55 C TRP 20 74.061 -9.253 25.139 1.00 3.00 C ATOM 56 O TRP 20 74.938 -8.352 25.196 1.00 3.00 O ATOM 57 N ARG 21 72.776 -9.022 25.260 1.00 3.00 N ATOM 58 CA ARG 21 72.146 -7.613 25.282 1.00 3.00 C ATOM 59 C ARG 21 71.682 -7.244 26.752 1.00 3.00 C ATOM 60 O ARG 21 71.560 -8.067 27.679 1.00 3.00 O ATOM 61 N PRO 22 71.400 -5.934 26.893 1.00 3.00 N ATOM 62 CA PRO 22 70.971 -5.294 28.165 1.00 3.00 C ATOM 63 C PRO 22 70.545 -3.771 27.797 1.00 3.00 C ATOM 64 O PRO 22 71.130 -3.135 26.981 1.00 3.00 O ATOM 65 N SER 23 69.548 -3.285 28.441 1.00 3.00 N ATOM 66 CA SER 23 68.946 -1.888 28.244 1.00 3.00 C ATOM 67 C SER 23 69.628 -1.005 27.123 1.00 3.00 C ATOM 68 O SER 23 68.901 -0.436 26.273 1.00 3.00 O ATOM 69 N PRO 24 70.893 -0.945 27.222 1.00 3.00 N ATOM 70 CA PRO 24 71.745 -0.040 26.377 1.00 3.00 C ATOM 71 C PRO 24 72.872 0.193 27.382 1.00 3.00 C ATOM 72 O PRO 24 72.766 1.055 28.284 1.00 3.00 O ATOM 73 N MET 25 73.951 -0.571 27.221 1.00 3.00 N ATOM 74 CA MET 25 75.111 -0.433 28.080 1.00 3.00 C ATOM 75 C MET 25 75.135 -1.026 29.485 1.00 3.00 C ATOM 76 O MET 25 76.233 -1.196 30.057 1.00 3.00 O ATOM 77 N LYS 26 73.998 -1.366 30.081 1.00 3.00 N ATOM 78 CA LYS 26 74.120 -1.887 31.426 1.00 3.00 C ATOM 79 C LYS 26 75.003 -2.789 32.248 1.00 3.00 C ATOM 80 O LYS 26 76.027 -3.276 31.716 1.00 3.00 O ATOM 81 N GLY 27 74.595 -3.011 33.484 1.00 3.00 N ATOM 82 CA GLY 27 75.464 -3.779 34.374 1.00 3.00 C ATOM 83 C GLY 27 76.318 -4.826 33.665 1.00 3.00 C ATOM 84 O GLY 27 77.562 -4.736 33.840 1.00 3.00 O ATOM 85 N VAL 28 75.745 -5.782 32.959 1.00 3.00 N ATOM 86 CA VAL 28 76.696 -6.780 32.354 1.00 3.00 C ATOM 87 C VAL 28 77.912 -6.092 31.724 1.00 3.00 C ATOM 88 O VAL 28 79.020 -6.532 32.003 1.00 3.00 O ATOM 89 N GLU 29 77.807 -5.089 30.930 1.00 9.00 N ATOM 90 CA GLU 29 78.964 -4.427 30.301 1.00 9.00 C ATOM 91 C GLU 29 80.055 -4.132 31.315 1.00 9.00 C ATOM 92 O GLU 29 81.220 -4.276 30.906 1.00 9.00 O ATOM 93 N ARG 30 79.694 -3.730 32.481 1.00 3.00 N ATOM 94 CA ARG 30 80.735 -3.363 33.498 1.00 3.00 C ATOM 95 C ARG 30 81.249 -4.602 34.149 1.00 3.00 C ATOM 96 O ARG 30 82.460 -4.860 34.173 1.00 3.00 O ATOM 97 N ARG 31 80.319 -5.369 34.652 1.00 3.00 N ATOM 98 CA ARG 31 80.654 -6.637 35.297 1.00 3.00 C ATOM 99 C ARG 31 81.297 -7.530 34.214 1.00 3.00 C ATOM 100 O ARG 31 82.340 -8.141 34.332 1.00 3.00 O ATOM 101 N MET 32 80.594 -7.568 33.143 1.00 3.00 N ATOM 102 CA MET 32 80.729 -8.328 31.901 1.00 3.00 C ATOM 103 C MET 32 82.232 -8.344 31.632 1.00 3.00 C ATOM 104 O MET 32 82.871 -9.404 31.635 1.00 3.00 O ATOM 105 N LEU 33 82.801 -7.166 31.409 1.00 3.00 N ATOM 106 CA LEU 33 84.211 -7.066 31.102 1.00 3.00 C ATOM 107 C LEU 33 85.095 -7.574 32.229 1.00 3.00 C ATOM 108 O LEU 33 86.064 -8.308 31.994 1.00 3.00 O ATOM 109 N ASP 34 84.771 -7.191 33.453 1.00 3.00 N ATOM 110 CA ASP 34 85.539 -7.648 34.567 1.00 3.00 C ATOM 111 C ASP 34 85.442 -9.144 34.715 1.00 3.00 C ATOM 112 O ASP 34 86.426 -9.822 35.065 1.00 3.00 O ATOM 113 N ARG 35 84.250 -9.668 34.437 1.00 3.00 N ATOM 114 CA ARG 35 84.032 -11.088 34.522 1.00 3.00 C ATOM 115 C ARG 35 84.562 -11.716 33.226 1.00 3.00 C ATOM 116 O ARG 35 85.144 -12.799 33.228 1.00 3.00 O ATOM 117 N ILE 36 84.356 -11.005 32.116 1.00 3.00 N ATOM 118 CA ILE 36 84.788 -11.477 30.802 1.00 3.00 C ATOM 119 C ILE 36 86.239 -11.940 30.792 1.00 3.00 C ATOM 120 O ILE 36 86.527 -13.060 30.353 1.00 3.00 O ATOM 121 N GLY 37 87.152 -11.121 31.312 1.00 3.00 N ATOM 122 CA GLY 37 88.572 -11.467 31.341 1.00 3.00 C ATOM 123 C GLY 37 88.859 -12.796 32.048 1.00 3.00 C ATOM 124 O GLY 37 89.607 -13.621 31.523 1.00 3.00 O ATOM 125 N GLY 38 88.259 -13.002 33.207 1.00 3.00 N ATOM 126 CA GLY 38 88.489 -14.224 33.978 1.00 3.00 C ATOM 127 C GLY 38 88.067 -15.505 33.267 1.00 3.00 C ATOM 128 O GLY 38 88.900 -16.334 32.911 1.00 3.00 O ATOM 129 N GLU 39 86.766 -15.666 33.059 1.00 3.00 N ATOM 130 CA GLU 39 86.221 -16.846 32.406 1.00 3.00 C ATOM 131 C GLU 39 86.829 -17.104 31.035 1.00 3.00 C ATOM 132 O GLU 39 87.057 -18.248 30.645 1.00 3.00 O ATOM 133 N VAL 40 87.145 -16.030 30.319 1.00 3.00 N ATOM 134 CA VAL 40 87.744 -16.169 28.996 1.00 3.00 C ATOM 135 C VAL 40 88.369 -15.428 27.819 1.00 3.00 C ATOM 136 O VAL 40 88.090 -15.709 26.641 1.00 3.00 O ATOM 137 N ALA 41 89.200 -14.454 28.169 1.00 3.00 N ATOM 138 CA ALA 41 89.945 -13.629 27.244 1.00 3.00 C ATOM 139 C ALA 41 91.060 -12.917 27.986 1.00 3.00 C ATOM 140 O ALA 41 91.041 -12.834 29.233 1.00 3.00 O ATOM 141 N ARG 42 92.047 -12.424 27.261 1.00 3.00 N ATOM 142 CA ARG 42 93.126 -11.704 27.890 1.00 3.00 C ATOM 143 C ARG 42 93.377 -10.364 27.219 1.00 3.00 C ATOM 144 O ARG 42 94.321 -9.622 27.579 1.00 3.00 O ATOM 145 N ALA 43 92.525 -10.050 26.245 1.00 3.00 N ATOM 146 CA ALA 43 92.612 -8.796 25.524 1.00 3.00 C ATOM 147 C ALA 43 92.236 -7.606 26.395 1.00 3.00 C ATOM 148 O ALA 43 91.435 -7.749 27.345 1.00 3.00 O ATOM 149 N THR 44 92.800 -6.439 26.111 1.00 3.00 N ATOM 150 CA THR 44 92.440 -5.267 26.876 1.00 3.00 C ATOM 151 C THR 44 91.297 -4.550 26.224 1.00 3.00 C ATOM 152 O THR 44 90.531 -3.820 26.867 1.00 3.00 O ATOM 153 N SER 45 91.182 -4.773 24.924 1.00 3.00 N ATOM 154 CA SER 45 90.114 -4.224 24.140 1.00 3.00 C ATOM 155 C SER 45 89.211 -5.333 23.681 1.00 3.00 C ATOM 156 O SER 45 89.612 -6.215 22.904 1.00 3.00 O ATOM 157 N ILE 46 87.993 -5.317 24.199 1.00 3.00 N ATOM 158 CA ILE 46 87.045 -6.362 23.929 1.00 3.00 C ATOM 159 C ILE 46 85.831 -5.931 23.147 1.00 3.00 C ATOM 160 O ILE 46 85.134 -4.954 23.534 1.00 3.00 O ATOM 161 N VAL 47 85.548 -6.632 22.054 1.00 3.00 N ATOM 162 CA VAL 47 84.386 -6.293 21.286 1.00 3.00 C ATOM 163 C VAL 47 83.223 -7.214 21.611 1.00 3.00 C ATOM 164 O VAL 47 83.319 -8.471 21.515 1.00 3.00 O ATOM 165 N ARG 48 82.111 -6.618 22.006 1.00 3.00 N ATOM 166 CA ARG 48 80.995 -7.412 22.407 1.00 3.00 C ATOM 167 C ARG 48 79.697 -6.945 21.851 1.00 3.00 C ATOM 168 O ARG 48 79.496 -5.725 21.646 1.00 3.00 O ATOM 169 N TYR 49 78.810 -7.894 21.578 1.00 3.00 N ATOM 170 CA TYR 49 77.500 -7.573 21.103 1.00 3.00 C ATOM 171 C TYR 49 76.467 -7.782 22.171 1.00 3.00 C ATOM 172 O TYR 49 76.600 -8.665 23.043 1.00 3.00 O ATOM 173 N ALA 50 75.433 -6.970 22.082 1.00 3.00 N ATOM 174 CA ALA 50 74.318 -6.980 22.968 1.00 3.00 C ATOM 175 C ALA 50 73.056 -7.281 22.188 1.00 3.00 C ATOM 176 O ALA 50 73.102 -7.300 20.944 1.00 3.00 O ATOM 177 N PRO 51 71.936 -7.520 22.858 1.00 3.00 N ATOM 178 CA PRO 51 70.736 -7.835 22.107 1.00 3.00 C ATOM 179 C PRO 51 70.438 -6.865 21.000 1.00 3.00 C ATOM 180 O PRO 51 70.222 -7.265 19.850 1.00 3.00 O ATOM 181 N GLY 52 70.430 -5.582 21.331 1.00 3.00 N ATOM 182 CA GLY 52 70.141 -4.581 20.342 1.00 3.00 C ATOM 183 C GLY 52 71.269 -3.600 20.126 1.00 3.00 C ATOM 184 O GLY 52 71.043 -2.457 19.684 1.00 3.00 O ATOM 185 N SER 53 72.494 -4.031 20.412 1.00 3.00 N ATOM 186 CA SER 53 73.619 -3.132 20.242 1.00 3.00 C ATOM 187 C SER 53 74.993 -3.736 20.017 1.00 3.00 C ATOM 188 O SER 53 75.166 -4.961 19.799 1.00 3.00 O ATOM 189 N ARG 54 75.991 -2.868 20.092 1.00 3.00 N ATOM 190 CA ARG 54 77.352 -3.261 19.871 1.00 3.00 C ATOM 191 C ARG 54 78.335 -2.325 20.527 1.00 3.00 C ATOM 192 O ARG 54 78.068 -1.116 20.617 1.00 3.00 O ATOM 193 N PHE 55 79.463 -2.839 20.998 1.00 3.00 N ATOM 194 CA PHE 55 80.426 -1.969 21.618 1.00 3.00 C ATOM 195 C PHE 55 81.803 -2.548 21.866 1.00 3.00 C ATOM 196 O PHE 55 82.015 -3.773 21.840 1.00 3.00 O ATOM 197 N SER 56 82.753 -1.650 22.075 1.00 3.00 N ATOM 198 CA SER 56 84.100 -2.027 22.384 1.00 3.00 C ATOM 199 C SER 56 84.445 -1.556 23.767 1.00 3.00 C ATOM 200 O SER 56 84.223 -0.380 24.100 1.00 3.00 O ATOM 201 N ALA 57 84.948 -2.464 24.590 1.00 3.00 N ATOM 202 CA ALA 57 85.296 -2.163 25.961 1.00 3.00 C ATOM 203 C ALA 57 86.772 -2.202 26.213 1.00 3.00 C ATOM 204 O ALA 57 87.511 -3.009 25.616 1.00 3.00 O ATOM 205 N HIS 58 87.223 -1.349 27.111 1.00 3.00 N ATOM 206 CA HIS 58 88.603 -1.350 27.440 1.00 3.00 C ATOM 207 C HIS 58 88.828 -1.534 28.896 1.00 3.00 C ATOM 208 O HIS 58 88.281 -0.785 29.724 1.00 3.00 O ATOM 209 N THR 59 89.597 -2.558 29.233 1.00 3.00 N ATOM 210 CA THR 59 89.926 -2.808 30.607 1.00 3.00 C ATOM 211 C THR 59 91.062 -1.912 31.024 1.00 3.00 C ATOM 212 O THR 59 92.226 -2.162 30.673 1.00 3.00 O ATOM 213 N HIS 60 90.734 -0.851 31.746 1.00 3.00 N ATOM 214 CA HIS 60 91.729 0.105 32.184 1.00 3.00 C ATOM 215 C HIS 60 92.695 -0.428 33.198 1.00 3.00 C ATOM 216 O HIS 60 92.369 -1.341 33.990 1.00 3.00 O ATOM 217 N ASP 61 93.891 0.151 33.183 1.00 3.00 N ATOM 218 CA ASP 61 94.955 -0.226 34.076 1.00 3.00 C ATOM 219 C ASP 61 94.578 -0.130 35.542 1.00 3.00 C ATOM 220 O ASP 61 94.948 -1.007 36.347 1.00 3.00 O ATOM 221 N GLY 62 93.848 0.919 35.910 1.00 3.00 N ATOM 222 CA GLY 62 93.419 1.065 37.290 1.00 3.00 C ATOM 223 C GLY 62 92.288 0.115 37.646 1.00 3.00 C ATOM 224 O GLY 62 91.798 0.093 38.794 1.00 3.00 O ATOM 225 N GLY 63 91.884 -0.668 36.649 1.00 3.00 N ATOM 226 CA GLY 63 90.822 -1.664 36.757 1.00 3.00 C ATOM 227 C GLY 63 89.411 -1.191 36.479 1.00 3.00 C ATOM 228 O GLY 63 88.430 -1.900 36.755 1.00 3.00 O ATOM 229 N GLU 64 89.289 0.015 35.956 1.00 3.00 N ATOM 230 CA GLU 64 88.000 0.504 35.592 1.00 3.00 C ATOM 231 C GLU 64 87.691 0.088 34.188 1.00 3.00 C ATOM 232 O GLU 64 88.612 -0.238 33.422 1.00 3.00 O ATOM 233 N GLU 65 86.423 0.075 33.826 1.00 3.00 N ATOM 234 CA GLU 65 86.053 -0.316 32.498 1.00 3.00 C ATOM 235 C GLU 65 85.584 0.829 31.639 1.00 3.00 C ATOM 236 O GLU 65 84.579 1.504 31.965 1.00 3.00 O ATOM 237 N PHE 66 86.290 1.059 30.536 1.00 3.00 N ATOM 238 CA PHE 66 85.935 2.132 29.635 1.00 3.00 C ATOM 239 C PHE 66 85.180 1.662 28.399 1.00 3.00 C ATOM 240 O PHE 66 85.695 0.859 27.588 1.00 3.00 O ATOM 241 N ILE 67 83.959 2.156 28.246 1.00 3.00 N ATOM 242 CA ILE 67 83.150 1.777 27.125 1.00 3.00 C ATOM 243 C ILE 67 82.762 3.107 26.465 1.00 3.00 C ATOM 244 O ILE 67 83.560 4.042 26.474 1.00 3.00 O ATOM 245 N VAL 68 81.560 3.195 25.913 1.00 3.00 N ATOM 246 CA VAL 68 81.140 4.437 25.282 1.00 3.00 C ATOM 247 C VAL 68 79.968 4.285 24.320 1.00 3.00 C ATOM 248 O VAL 68 79.543 3.159 24.037 1.00 3.00 O ATOM 249 N LEU 69 79.472 5.415 23.818 1.00 3.00 N ATOM 250 CA LEU 69 78.355 5.482 22.870 1.00 3.00 C ATOM 251 C LEU 69 78.490 6.772 22.072 1.00 3.00 C ATOM 252 O LEU 69 78.688 7.846 22.651 1.00 3.00 O ATOM 253 N ASP 70 78.395 6.695 20.753 1.00 3.00 N ATOM 254 CA ASP 70 78.533 7.878 19.911 1.00 3.00 C ATOM 255 C ASP 70 77.309 8.802 19.924 1.00 3.00 C ATOM 256 O ASP 70 76.213 8.405 20.322 1.00 3.00 O ATOM 257 N GLY 71 77.528 10.036 19.481 1.00 3.00 N ATOM 258 CA GLY 71 76.469 11.046 19.410 1.00 3.00 C ATOM 259 C GLY 71 75.596 10.789 18.188 1.00 3.00 C ATOM 260 O GLY 71 76.035 10.166 17.212 1.00 3.00 O ATOM 261 N VAL 72 74.367 11.290 18.224 1.00 3.00 N ATOM 262 CA VAL 72 73.417 11.148 17.114 1.00 3.00 C ATOM 263 C VAL 72 72.463 12.300 17.365 1.00 3.00 C ATOM 264 O VAL 72 71.544 12.208 18.225 1.00 3.00 O ATOM 265 N PHE 73 72.668 13.382 16.623 1.00 3.00 N ATOM 266 CA PHE 73 71.883 14.589 16.785 1.00 3.00 C ATOM 267 C PHE 73 70.685 14.442 15.866 1.00 3.00 C ATOM 268 O PHE 73 70.821 14.341 14.656 1.00 3.00 O ATOM 269 N GLN 74 69.487 14.420 16.435 1.00 3.00 N ATOM 270 CA GLN 74 68.282 14.292 15.615 1.00 3.00 C ATOM 271 C GLN 74 67.037 14.871 16.277 1.00 3.00 C ATOM 272 O GLN 74 66.933 14.948 17.494 1.00 3.00 O ATOM 273 N ASP 75 66.083 15.269 15.455 1.00 3.00 N ATOM 274 CA ASP 75 64.818 15.854 15.904 1.00 3.00 C ATOM 275 C ASP 75 63.699 15.161 15.157 1.00 3.00 C ATOM 276 O ASP 75 63.926 14.641 14.072 1.00 3.00 O ATOM 277 N GLU 76 62.490 15.161 15.707 1.00 3.00 N ATOM 278 CA GLU 76 61.361 14.507 15.053 1.00 3.00 C ATOM 279 C GLU 76 60.515 15.416 14.149 1.00 3.00 C ATOM 280 O GLU 76 59.734 14.929 13.330 1.00 3.00 O ATOM 281 N HIS 77 60.674 16.729 14.307 1.00 3.00 N ATOM 282 CA HIS 77 59.932 17.720 13.524 1.00 3.00 C ATOM 283 C HIS 77 60.798 18.972 13.369 1.00 3.00 C ATOM 284 O HIS 77 61.334 19.487 14.341 1.00 3.00 O ATOM 285 N GLY 78 60.935 19.468 12.143 1.00 3.00 N ATOM 286 CA GLY 78 61.740 20.673 11.915 1.00 3.00 C ATOM 287 C GLY 78 63.200 20.789 11.595 1.00 3.00 C ATOM 288 O GLY 78 63.588 20.927 10.418 1.00 3.00 O ATOM 289 N ASP 79 64.028 20.741 12.626 1.00 3.00 N ATOM 290 CA ASP 79 65.451 20.863 12.445 1.00 3.00 C ATOM 291 C ASP 79 66.194 20.803 13.748 1.00 3.00 C ATOM 292 O ASP 79 65.587 20.928 14.831 1.00 3.00 O ATOM 293 N TYR 80 67.502 20.601 13.666 1.00 3.00 N ATOM 294 CA TYR 80 68.293 20.550 14.849 1.00 3.00 C ATOM 295 C TYR 80 68.228 21.819 15.671 1.00 3.00 C ATOM 296 O TYR 80 68.157 22.944 15.127 1.00 3.00 O ATOM 297 N PRO 81 68.256 21.630 16.984 1.00 3.00 N ATOM 298 CA PRO 81 68.252 22.705 17.954 1.00 3.00 C ATOM 299 C PRO 81 68.994 22.263 19.183 1.00 3.00 C ATOM 300 O PRO 81 68.922 21.079 19.534 1.00 3.00 O ATOM 301 N ALA 82 69.732 23.160 19.828 1.00 3.00 N ATOM 302 CA ALA 82 70.427 22.781 21.039 1.00 3.00 C ATOM 303 C ALA 82 69.442 22.659 22.197 1.00 3.00 C ATOM 304 O ALA 82 69.701 21.976 23.210 1.00 3.00 O ATOM 305 N GLY 83 68.294 23.313 22.019 1.00 3.00 N ATOM 306 CA GLY 83 67.212 23.288 22.981 1.00 3.00 C ATOM 307 C GLY 83 65.860 23.195 22.313 1.00 3.00 C ATOM 308 O GLY 83 65.493 24.074 21.532 1.00 3.00 O ATOM 309 N THR 84 65.108 22.145 22.588 1.00 3.00 N ATOM 310 CA THR 84 63.795 22.021 22.009 1.00 3.00 C ATOM 311 C THR 84 62.686 22.334 23.002 1.00 3.00 C ATOM 312 O THR 84 62.845 22.131 24.231 1.00 3.00 O ATOM 313 N TYR 85 61.563 22.819 22.488 1.00 3.00 N ATOM 314 CA TYR 85 60.424 23.144 23.313 1.00 3.00 C ATOM 315 C TYR 85 59.372 22.060 23.287 1.00 3.00 C ATOM 316 O TYR 85 58.711 21.851 22.255 1.00 3.00 O ATOM 317 N VAL 86 59.227 21.339 24.397 1.00 3.00 N ATOM 318 CA VAL 86 58.242 20.277 24.482 1.00 3.00 C ATOM 319 C VAL 86 57.103 20.585 25.401 1.00 3.00 C ATOM 320 O VAL 86 57.291 20.925 26.585 1.00 3.00 O ATOM 321 N ARG 87 55.902 20.435 24.883 1.00 3.00 N ATOM 322 CA ARG 87 54.739 20.718 25.653 1.00 3.00 C ATOM 323 C ARG 87 54.156 19.492 26.334 1.00 3.00 C ATOM 324 O ARG 87 54.089 18.422 25.727 1.00 3.00 O ATOM 325 N ASN 88 53.800 19.616 27.609 1.00 3.00 N ATOM 326 CA ASN 88 53.163 18.524 28.335 1.00 3.00 C ATOM 327 C ASN 88 51.881 19.017 28.985 1.00 3.00 C ATOM 328 O ASN 88 51.589 20.215 28.936 1.00 3.00 O ATOM 329 N PRO 89 51.108 18.135 29.595 1.00 3.00 N ATOM 330 CA PRO 89 49.878 18.576 30.212 1.00 3.00 C ATOM 331 C PRO 89 50.034 19.592 31.314 1.00 3.00 C ATOM 332 O PRO 89 49.104 20.376 31.578 1.00 3.00 O ATOM 333 N PRO 90 51.196 19.612 31.955 1.00 3.00 N ATOM 334 CA PRO 90 51.370 20.483 33.091 1.00 3.00 C ATOM 335 C PRO 90 52.452 21.514 33.002 1.00 3.00 C ATOM 336 O PRO 90 52.573 22.383 33.896 1.00 3.00 O ATOM 337 N THR 91 53.258 21.433 31.956 1.00 3.00 N ATOM 338 CA THR 91 54.354 22.344 31.820 1.00 3.00 C ATOM 339 C THR 91 55.041 22.248 30.483 1.00 3.00 C ATOM 340 O THR 91 55.030 21.185 29.812 1.00 3.00 O ATOM 341 N THR 92 55.596 23.365 30.046 1.00 3.00 N ATOM 342 CA THR 92 56.355 23.343 28.839 1.00 3.00 C ATOM 343 C THR 92 57.794 23.323 29.251 1.00 3.00 C ATOM 344 O THR 92 58.218 24.167 30.056 1.00 3.00 O ATOM 345 N SER 93 58.551 22.347 28.772 1.00 3.00 N ATOM 346 CA SER 93 59.941 22.265 29.142 1.00 3.00 C ATOM 347 C SER 93 60.899 22.419 27.997 1.00 3.00 C ATOM 348 O SER 93 60.515 22.248 26.829 1.00 3.00 O ATOM 349 N HIS 94 62.139 22.775 28.316 1.00 3.00 N ATOM 350 CA HIS 94 63.166 22.848 27.329 1.00 3.00 C ATOM 351 C HIS 94 64.013 21.616 27.457 1.00 3.00 C ATOM 352 O HIS 94 64.274 21.161 28.584 1.00 3.00 O ATOM 353 N VAL 95 64.450 21.057 26.344 1.00 3.00 N ATOM 354 CA VAL 95 65.282 19.894 26.426 1.00 3.00 C ATOM 355 C VAL 95 66.222 19.738 25.267 1.00 3.00 C ATOM 356 O VAL 95 66.043 20.342 24.201 1.00 3.00 O ATOM 357 N PRO 96 67.877 16.903 22.771 1.00 3.00 N ATOM 358 CA PRO 96 67.505 15.555 22.354 1.00 3.00 C ATOM 359 C PRO 96 68.631 14.896 21.609 1.00 3.00 C ATOM 360 O PRO 96 69.302 15.536 20.793 1.00 3.00 O ATOM 361 N GLY 97 68.862 13.623 21.888 1.00 3.00 N ATOM 362 CA GLY 97 69.967 12.935 21.254 1.00 3.00 C ATOM 363 C GLY 97 69.841 11.438 21.314 1.00 3.00 C ATOM 364 O GLY 97 69.082 10.877 22.129 1.00 3.00 O ATOM 365 N SER 98 70.574 10.774 20.442 1.00 3.00 N ATOM 366 CA SER 98 70.560 9.344 20.436 1.00 3.00 C ATOM 367 C SER 98 71.922 8.736 20.649 1.00 3.00 C ATOM 368 O SER 98 72.901 9.159 20.004 1.00 3.00 O ATOM 369 N ALA 99 71.999 7.780 21.565 1.00 3.00 N ATOM 370 CA ALA 99 73.233 7.028 21.824 1.00 3.00 C ATOM 371 C ALA 99 73.037 5.594 21.346 1.00 3.00 C ATOM 372 O ALA 99 73.661 4.653 21.847 1.00 3.00 O ATOM 373 N GLU 100 72.160 5.448 20.360 1.00 3.00 N ATOM 374 CA GLU 100 71.788 4.141 19.850 1.00 3.00 C ATOM 375 C GLU 100 70.298 4.180 20.153 1.00 3.00 C ATOM 376 O GLU 100 69.451 3.977 19.257 1.00 3.00 O ATOM 377 N GLY 101 69.978 4.449 21.420 1.00 3.00 N ATOM 378 CA GLY 101 68.612 4.618 21.876 1.00 3.00 C ATOM 379 C GLY 101 68.278 6.118 21.975 1.00 3.00 C ATOM 380 O GLY 101 69.191 6.981 21.903 1.00 3.00 O ATOM 381 N CYS 102 66.991 6.468 22.120 1.00 3.00 N ATOM 382 CA CYS 102 66.611 7.878 22.205 1.00 3.00 C ATOM 383 C CYS 102 66.605 8.498 23.603 1.00 3.00 C ATOM 384 O CYS 102 66.228 7.862 24.605 1.00 3.00 O ATOM 385 N THR 103 67.034 9.748 23.673 1.00 3.00 N ATOM 386 CA THR 103 67.079 10.448 24.927 1.00 3.00 C ATOM 387 C THR 103 66.576 11.838 24.857 1.00 3.00 C ATOM 388 O THR 103 66.721 12.531 23.852 1.00 3.00 O ATOM 389 N ILE 104 65.977 12.236 25.959 1.00 3.00 N ATOM 390 CA ILE 104 65.453 13.549 26.168 1.00 3.00 C ATOM 391 C ILE 104 66.097 14.093 27.433 1.00 3.00 C ATOM 392 O ILE 104 65.957 13.459 28.513 1.00 3.00 O ATOM 393 N PHE 105 66.799 15.219 27.344 1.00 3.00 N ATOM 394 CA PHE 105 67.485 15.753 28.520 1.00 3.00 C ATOM 395 C PHE 105 67.041 17.127 28.980 1.00 3.00 C ATOM 396 O PHE 105 67.263 18.126 28.293 1.00 3.00 O ATOM 397 N VAL 106 66.450 17.169 30.168 1.00 3.00 N ATOM 398 CA VAL 106 65.962 18.384 30.778 1.00 3.00 C ATOM 399 C VAL 106 66.811 18.824 31.972 1.00 3.00 C ATOM 400 O VAL 106 67.143 18.012 32.837 1.00 3.00 O ATOM 401 N LYS 107 67.181 20.098 32.021 1.00 3.00 N ATOM 402 CA LYS 107 67.981 20.590 33.135 1.00 3.00 C ATOM 403 C LYS 107 67.111 21.038 34.288 1.00 3.00 C ATOM 404 O LYS 107 66.038 21.608 34.083 1.00 3.00 O ATOM 405 N LEU 108 67.546 20.757 35.507 1.00 3.00 N ATOM 406 CA LEU 108 66.786 21.128 36.672 1.00 3.00 C ATOM 407 C LEU 108 67.656 21.794 37.712 1.00 3.00 C ATOM 408 O LEU 108 68.899 21.547 37.762 1.00 3.00 O ATOM 409 N TRP 109 67.030 22.632 38.532 1.00 3.00 N ATOM 410 CA TRP 109 67.716 23.358 39.591 1.00 3.00 C ATOM 411 C TRP 109 68.191 22.494 40.751 1.00 3.00 C ATOM 412 O TRP 109 69.301 22.666 41.242 1.00 3.00 O ATOM 413 N GLN 110 67.340 21.567 41.173 1.00 3.00 N ATOM 414 CA GLN 110 67.599 20.668 42.305 1.00 3.00 C ATOM 415 C GLN 110 67.174 19.244 41.973 1.00 3.00 C ATOM 416 O GLN 110 65.959 18.956 41.855 1.00 3.00 O ATOM 417 N PHE 111 68.153 18.353 41.823 1.00 3.00 N ATOM 418 CA PHE 111 67.863 17.004 41.427 1.00 3.00 C ATOM 419 C PHE 111 66.857 16.275 42.285 1.00 3.00 C ATOM 420 O PHE 111 66.045 15.498 41.758 1.00 3.00 O ATOM 421 N ASP 112 66.881 16.531 43.592 1.00 3.00 N ATOM 422 CA ASP 112 65.971 15.872 44.513 1.00 3.00 C ATOM 423 C ASP 112 64.531 16.318 44.412 1.00 3.00 C ATOM 424 O ASP 112 63.621 15.521 44.702 1.00 3.00 O ATOM 425 N PRO 113 64.299 17.573 44.021 1.00 3.00 N ATOM 426 CA PRO 113 62.939 18.056 43.900 1.00 3.00 C ATOM 427 C PRO 113 62.405 18.109 42.481 1.00 3.00 C ATOM 428 O PRO 113 61.239 18.502 42.251 1.00 3.00 O ATOM 429 N ALA 114 63.227 17.722 41.513 1.00 3.00 N ATOM 430 CA ALA 114 62.749 17.715 40.152 1.00 3.00 C ATOM 431 C ALA 114 61.491 16.876 40.047 1.00 3.00 C ATOM 432 O ALA 114 61.401 15.784 40.666 1.00 3.00 O ATOM 433 N ASP 115 60.514 17.345 39.289 1.00 3.00 N ATOM 434 CA ASP 115 59.298 16.599 39.164 1.00 3.00 C ATOM 435 C ASP 115 59.386 15.381 38.245 1.00 3.00 C ATOM 436 O ASP 115 58.631 15.248 37.247 1.00 3.00 O ATOM 437 N ARG 116 60.304 14.475 38.571 1.00 3.00 N ATOM 438 CA ARG 116 60.453 13.272 37.781 1.00 3.00 C ATOM 439 C ARG 116 59.187 12.415 37.748 1.00 3.00 C ATOM 440 O ARG 116 58.826 11.840 36.699 1.00 3.00 O ATOM 441 N THR 117 58.515 12.334 38.892 1.00 3.00 N ATOM 442 CA THR 117 57.301 11.548 39.034 1.00 3.00 C ATOM 443 C THR 117 56.236 11.843 38.000 1.00 3.00 C ATOM 444 O THR 117 55.564 10.931 37.512 1.00 3.00 O ATOM 445 N GLN 118 56.053 13.116 37.679 1.00 3.00 N ATOM 446 CA GLN 118 55.062 13.500 36.692 1.00 3.00 C ATOM 447 C GLN 118 55.627 13.764 35.322 1.00 3.00 C ATOM 448 O GLN 118 55.074 13.283 34.306 1.00 3.00 O ATOM 449 N PHE 119 56.711 14.532 35.259 1.00 3.00 N ATOM 450 CA PHE 119 57.300 14.818 33.978 1.00 3.00 C ATOM 451 C PHE 119 57.878 13.588 33.294 1.00 3.00 C ATOM 452 O PHE 119 57.777 13.452 32.066 1.00 3.00 O ATOM 453 N SER 120 58.458 12.682 34.080 1.00 3.00 N ATOM 454 CA SER 120 59.050 11.479 33.516 1.00 3.00 C ATOM 455 C SER 120 58.103 10.745 32.589 1.00 3.00 C ATOM 456 O SER 120 58.387 10.604 31.396 1.00 3.00 O ATOM 457 N LYS 121 56.955 10.272 33.102 1.00 3.00 N ATOM 458 CA LYS 121 55.967 9.551 32.295 1.00 3.00 C ATOM 459 C LYS 121 55.499 10.363 31.099 1.00 3.00 C ATOM 460 O LYS 121 55.323 9.815 29.994 1.00 3.00 O ATOM 461 N ASN 122 55.315 11.671 31.296 1.00 3.00 N ATOM 462 CA ASN 122 54.851 12.545 30.224 1.00 3.00 C ATOM 463 C ASN 122 55.829 12.708 29.104 1.00 3.00 C ATOM 464 O ASN 122 55.436 12.840 27.932 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 464 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 79.60 39.6 230 95.8 240 ARMSMC SECONDARY STRUCTURE . . 77.08 43.6 94 100.0 94 ARMSMC SURFACE . . . . . . . . 84.95 39.3 150 93.8 160 ARMSMC BURIED . . . . . . . . 68.44 40.0 80 100.0 80 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 102 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 92 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 44 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 68 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 34 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 74 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 63 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 33 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 54 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 26 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 22 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 13 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 24 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 12 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 8 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 15.42 (Number of atoms: 116) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 15.42 116 95.9 121 CRMSCA CRN = ALL/NP . . . . . 0.1329 CRMSCA SECONDARY STRUCTURE . . 13.08 47 100.0 47 CRMSCA SURFACE . . . . . . . . 15.86 76 93.8 81 CRMSCA BURIED . . . . . . . . 14.56 40 100.0 40 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 15.37 464 78.1 594 CRMSMC SECONDARY STRUCTURE . . 13.15 188 80.7 233 CRMSMC SURFACE . . . . . . . . 15.67 304 76.4 398 CRMSMC BURIED . . . . . . . . 14.79 160 81.6 196 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 463 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 405 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 210 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 312 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 151 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 15.37 464 49.0 947 CRMSALL SECONDARY STRUCTURE . . 13.15 188 47.2 398 CRMSALL SURFACE . . . . . . . . 15.67 304 47.8 636 CRMSALL BURIED . . . . . . . . 14.79 160 51.4 311 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.001 0.590 0.298 116 95.9 121 ERRCA SECONDARY STRUCTURE . . 8.913 0.540 0.277 47 100.0 47 ERRCA SURFACE . . . . . . . . 11.325 0.590 0.295 76 93.8 81 ERRCA BURIED . . . . . . . . 10.385 0.591 0.304 40 100.0 40 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.948 0.587 0.295 464 78.1 594 ERRMC SECONDARY STRUCTURE . . 8.941 0.535 0.272 188 80.7 233 ERRMC SURFACE . . . . . . . . 11.146 0.587 0.295 304 76.4 398 ERRMC BURIED . . . . . . . . 10.573 0.587 0.296 160 81.6 196 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 463 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 405 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 210 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 312 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 151 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.948 0.587 0.295 464 49.0 947 ERRALL SECONDARY STRUCTURE . . 8.941 0.535 0.272 188 47.2 398 ERRALL SURFACE . . . . . . . . 11.146 0.587 0.295 304 47.8 636 ERRALL BURIED . . . . . . . . 10.573 0.587 0.296 160 51.4 311 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 2 6 39 116 121 DISTCA CA (P) 0.00 0.83 1.65 4.96 32.23 121 DISTCA CA (RMS) 0.00 1.10 1.98 3.92 7.86 DISTCA ALL (N) 1 2 8 22 154 464 947 DISTALL ALL (P) 0.11 0.21 0.84 2.32 16.26 947 DISTALL ALL (RMS) 0.57 0.87 2.40 3.73 7.71 DISTALL END of the results output