####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 64 ( 314), selected 64 , name T0579TS373_1-D2 # Molecule2: number of CA atoms 64 ( 966), selected 64 , name T0579-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0579TS373_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 47 - 67 4.96 16.63 LCS_AVERAGE: 29.42 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 30 - 37 1.95 15.94 LONGEST_CONTINUOUS_SEGMENT: 8 31 - 38 1.86 15.23 LONGEST_CONTINUOUS_SEGMENT: 8 48 - 55 1.90 16.86 LONGEST_CONTINUOUS_SEGMENT: 8 68 - 75 1.79 17.29 LONGEST_CONTINUOUS_SEGMENT: 8 79 - 86 1.90 16.44 LCS_AVERAGE: 11.18 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 57 - 62 0.66 21.23 LONGEST_CONTINUOUS_SEGMENT: 6 85 - 90 0.91 16.14 LCS_AVERAGE: 6.88 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 64 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 30 T 30 5 8 19 4 5 5 6 7 10 11 12 15 16 19 22 25 27 32 34 35 37 38 40 LCS_GDT T 31 T 31 5 8 19 4 5 6 7 8 10 11 14 15 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT A 32 A 32 5 8 19 4 5 6 7 8 10 11 14 16 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT Y 33 Y 33 5 8 19 4 5 6 7 8 10 11 14 16 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT V 34 V 34 5 8 19 3 5 6 7 8 9 11 14 16 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT V 35 V 35 5 8 19 3 5 6 7 8 10 11 14 16 16 22 24 25 29 32 34 35 37 38 40 LCS_GDT S 36 S 36 5 8 19 3 5 6 7 8 9 11 14 16 16 22 24 25 29 32 34 35 37 38 40 LCS_GDT Y 37 Y 37 5 8 19 3 5 6 7 8 10 11 14 16 16 19 20 25 26 32 34 35 37 38 40 LCS_GDT T 38 T 38 5 8 19 3 5 6 7 8 10 11 14 16 16 22 24 25 29 32 34 35 37 38 40 LCS_GDT P 39 P 39 4 7 19 3 3 4 6 7 9 11 14 15 16 22 24 25 29 32 34 35 37 38 40 LCS_GDT T 40 T 40 4 7 19 3 3 4 6 8 10 11 14 16 16 22 24 25 29 32 34 35 37 38 40 LCS_GDT N 41 N 41 3 7 19 3 4 6 7 8 10 11 14 15 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT G 42 G 42 3 6 19 3 4 6 7 7 10 11 14 16 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT G 43 G 43 3 6 19 3 3 4 6 7 9 11 14 16 17 20 22 25 29 32 34 35 37 38 40 LCS_GDT Q 44 Q 44 3 6 19 3 3 4 6 7 9 11 13 16 16 19 22 24 29 32 34 35 37 38 40 LCS_GDT R 45 R 45 4 6 19 3 3 4 5 6 6 9 13 14 17 19 22 25 28 32 34 35 37 38 40 LCS_GDT V 46 V 46 4 6 19 3 3 4 5 6 6 10 13 16 17 19 20 22 24 28 32 35 37 38 40 LCS_GDT D 47 D 47 4 6 21 3 3 4 5 5 8 11 14 15 16 19 20 22 24 28 32 35 37 38 40 LCS_GDT H 48 H 48 4 8 21 0 3 5 8 10 12 13 14 15 16 19 20 22 24 28 29 30 32 34 39 LCS_GDT H 49 H 49 3 8 21 3 3 4 8 10 12 13 14 15 15 16 19 21 24 28 29 30 32 33 37 LCS_GDT K 50 K 50 5 8 21 3 4 6 8 10 12 13 14 15 15 16 19 21 24 25 27 30 32 34 40 LCS_GDT W 51 W 51 5 8 21 3 4 5 7 9 12 13 14 15 17 18 19 21 24 28 32 35 37 38 40 LCS_GDT V 52 V 52 5 8 21 3 5 6 8 10 12 13 14 15 17 20 24 25 29 32 34 35 37 38 40 LCS_GDT I 53 I 53 5 8 21 3 4 6 8 10 12 13 14 15 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT Q 54 Q 54 5 8 21 4 4 6 7 10 12 13 14 15 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT E 55 E 55 4 8 21 4 4 4 8 10 12 13 14 15 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT E 56 E 56 4 5 21 4 4 4 5 5 12 13 14 15 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT I 57 I 57 6 6 21 4 6 6 8 10 12 13 14 15 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT K 58 K 58 6 6 21 3 6 6 6 10 12 13 14 15 17 22 24 25 29 32 34 34 37 38 40 LCS_GDT D 59 D 59 6 6 21 4 6 6 6 9 10 11 14 15 16 17 19 24 29 32 34 34 37 38 40 LCS_GDT A 60 A 60 6 6 21 4 6 6 6 8 9 10 13 14 16 18 22 25 29 32 34 35 37 38 40 LCS_GDT G 61 G 61 6 7 21 4 6 6 6 8 9 10 13 14 16 19 22 25 29 32 34 35 37 38 40 LCS_GDT D 62 D 62 6 7 21 4 6 6 6 8 9 10 11 14 15 15 17 21 23 26 32 35 37 38 40 LCS_GDT K 63 K 63 3 7 21 3 4 4 5 7 9 10 10 13 14 16 17 20 23 26 32 35 37 38 40 LCS_GDT T 64 T 64 3 7 21 3 4 4 6 8 9 10 11 13 14 16 17 18 21 22 25 30 33 35 38 LCS_GDT L 65 L 65 3 7 21 3 3 4 7 8 9 9 11 14 15 16 19 20 23 26 32 35 37 38 40 LCS_GDT Q 66 Q 66 3 7 21 3 4 4 6 7 9 9 11 14 15 16 19 19 22 25 28 32 36 38 39 LCS_GDT P 67 P 67 3 7 21 3 4 4 6 7 10 13 14 15 15 16 19 20 24 26 32 35 37 38 39 LCS_GDT G 68 G 68 3 8 18 3 4 6 8 10 12 13 14 15 15 17 20 22 25 26 32 35 37 38 40 LCS_GDT D 69 D 69 5 8 17 3 4 6 8 10 12 13 14 15 16 18 22 25 29 32 34 35 37 38 40 LCS_GDT Q 70 Q 70 5 8 17 3 4 6 7 8 10 11 13 14 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT V 71 V 71 5 8 17 3 4 6 7 8 10 11 14 15 17 22 24 25 29 32 34 35 37 38 40 LCS_GDT I 72 I 72 5 8 17 3 4 5 7 8 10 10 11 15 15 20 24 25 25 29 34 34 35 36 39 LCS_GDT L 73 L 73 5 8 17 3 4 5 7 8 10 11 14 15 15 17 18 22 24 28 31 32 35 36 39 LCS_GDT E 74 E 74 4 8 17 3 3 5 7 8 10 10 12 13 15 17 18 22 24 28 29 30 32 35 38 LCS_GDT A 75 A 75 4 8 17 3 3 5 7 8 10 10 11 16 16 19 20 22 24 28 29 30 33 35 38 LCS_GDT S 76 S 76 4 7 17 3 3 4 5 8 10 11 13 16 16 19 20 22 24 28 29 30 33 35 38 LCS_GDT H 77 H 77 4 5 17 3 3 4 4 7 10 10 11 16 16 19 20 22 24 28 29 30 33 35 38 LCS_GDT M 78 M 78 4 6 17 3 4 6 6 8 10 11 13 16 16 19 20 22 24 28 29 30 33 35 38 LCS_GDT K 79 K 79 4 8 17 3 4 6 6 8 10 10 11 14 15 17 18 20 22 28 29 30 32 34 35 LCS_GDT G 80 G 80 4 8 17 3 4 6 6 8 10 10 11 14 15 17 17 20 22 24 25 27 30 32 35 LCS_GDT M 81 M 81 4 8 17 3 4 6 6 8 10 10 11 14 15 17 17 20 22 24 25 27 30 32 35 LCS_GDT K 82 K 82 4 8 17 3 4 5 6 8 10 10 11 14 15 16 17 19 21 23 25 27 30 32 35 LCS_GDT G 83 G 83 4 8 17 3 4 5 6 8 10 10 11 14 15 16 17 19 21 23 24 27 30 32 35 LCS_GDT A 84 A 84 4 8 17 3 4 4 5 7 10 10 11 14 15 16 17 19 21 23 25 27 30 32 35 LCS_GDT T 85 T 85 6 8 17 3 4 6 6 7 10 10 11 14 17 18 19 20 22 24 25 28 30 32 35 LCS_GDT A 86 A 86 6 8 17 3 4 6 6 7 10 10 11 14 15 18 19 20 22 24 25 28 30 32 36 LCS_GDT E 87 E 87 6 7 17 4 4 6 6 7 9 9 11 14 17 20 21 23 25 29 34 34 35 36 39 LCS_GDT I 88 I 88 6 7 17 4 4 6 6 7 10 11 14 14 17 22 24 25 29 32 34 34 35 37 40 LCS_GDT D 89 D 89 6 7 17 4 4 6 7 7 10 11 14 14 17 22 24 25 29 32 34 34 35 37 40 LCS_GDT S 90 S 90 6 7 17 4 4 6 6 7 10 11 14 15 17 22 24 25 29 32 34 34 35 37 40 LCS_GDT A 91 A 91 3 7 17 3 3 3 4 6 8 9 10 12 13 17 17 20 21 23 27 28 30 33 36 LCS_GDT E 92 E 92 3 3 17 0 3 3 4 6 8 9 10 11 11 17 17 18 24 24 27 28 30 34 38 LCS_GDT K 93 K 93 0 3 15 0 0 3 3 3 4 4 4 4 11 12 14 17 18 19 21 22 26 26 28 LCS_AVERAGE LCS_A: 15.83 ( 6.88 11.18 29.42 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 8 10 12 13 14 16 17 22 24 25 29 32 34 35 37 38 40 GDT PERCENT_AT 6.25 9.38 9.38 12.50 15.62 18.75 20.31 21.88 25.00 26.56 34.38 37.50 39.06 45.31 50.00 53.12 54.69 57.81 59.38 62.50 GDT RMS_LOCAL 0.29 0.66 0.66 1.32 1.57 1.89 2.07 2.25 3.14 3.45 4.17 4.34 4.44 5.21 5.50 5.69 6.41 6.54 6.69 6.95 GDT RMS_ALL_AT 21.17 21.23 21.23 16.58 16.58 16.57 16.76 16.83 16.37 12.10 12.89 12.86 12.99 12.37 12.33 12.29 12.42 12.36 12.44 12.31 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 30 T 30 9.284 2 0.459 0.541 10.789 0.476 0.340 LGA T 31 T 31 9.678 2 0.041 0.069 10.985 1.190 0.680 LGA A 32 A 32 8.672 0 0.153 0.232 9.053 2.500 2.571 LGA Y 33 Y 33 9.834 7 0.112 0.182 10.789 0.476 0.159 LGA V 34 V 34 10.828 2 0.050 0.072 11.452 0.000 0.000 LGA V 35 V 35 11.163 2 0.062 0.117 12.784 0.000 0.000 LGA S 36 S 36 13.503 1 0.093 0.126 14.219 0.000 0.000 LGA Y 37 Y 37 14.433 7 0.175 0.244 16.174 0.000 0.000 LGA T 38 T 38 18.410 2 0.029 0.050 20.543 0.000 0.000 LGA P 39 P 39 17.714 2 0.559 0.502 20.202 0.000 0.000 LGA T 40 T 40 24.586 2 0.603 0.544 26.538 0.000 0.000 LGA N 41 N 41 25.087 3 0.131 0.134 26.939 0.000 0.000 LGA G 42 G 42 27.585 0 0.309 0.309 27.585 0.000 0.000 LGA G 43 G 43 24.990 0 0.525 0.525 25.654 0.000 0.000 LGA Q 44 Q 44 19.405 4 0.132 0.181 21.442 0.000 0.000 LGA R 45 R 45 17.936 6 0.590 0.549 18.774 0.000 0.000 LGA V 46 V 46 12.662 2 0.537 0.482 14.456 0.833 0.476 LGA D 47 D 47 6.937 3 0.490 0.495 9.315 22.262 12.381 LGA H 48 H 48 1.686 5 0.514 0.499 4.286 73.690 33.190 LGA H 49 H 49 2.054 5 0.616 0.566 4.116 64.286 31.429 LGA K 50 K 50 1.176 4 0.072 0.126 5.018 59.762 31.376 LGA W 51 W 51 3.326 9 0.123 0.173 4.445 50.119 16.973 LGA V 52 V 52 1.158 2 0.056 0.106 1.648 81.548 58.231 LGA I 53 I 53 1.088 3 0.258 0.382 3.354 73.571 43.929 LGA Q 54 Q 54 2.848 4 0.601 0.617 5.445 73.214 35.450 LGA E 55 E 55 1.963 4 0.209 0.223 3.690 63.690 34.656 LGA E 56 E 56 3.653 4 0.110 0.111 4.971 55.595 28.201 LGA I 57 I 57 1.644 3 0.602 0.571 3.441 69.286 41.786 LGA K 58 K 58 2.552 4 0.223 0.226 4.810 66.905 33.228 LGA D 59 D 59 5.569 3 0.072 0.078 8.605 20.238 11.012 LGA A 60 A 60 8.137 0 0.578 0.600 8.923 6.905 6.952 LGA G 61 G 61 11.062 0 0.165 0.165 14.426 0.119 0.119 LGA D 62 D 62 15.834 3 0.566 0.527 18.192 0.000 0.000 LGA K 63 K 63 13.862 4 0.213 0.295 14.365 0.000 0.000 LGA T 64 T 64 15.064 2 0.566 0.511 16.643 0.000 0.000 LGA L 65 L 65 8.582 3 0.039 0.076 10.600 3.095 4.226 LGA Q 66 Q 66 9.404 4 0.654 0.591 11.530 8.333 3.704 LGA P 67 P 67 3.224 2 0.585 0.524 5.688 50.238 34.898 LGA G 68 G 68 0.685 0 0.321 0.321 3.616 72.024 72.024 LGA D 69 D 69 1.819 3 0.480 0.492 5.066 54.405 38.512 LGA Q 70 Q 70 8.203 4 0.020 0.074 10.267 7.619 3.386 LGA V 71 V 71 10.138 2 0.089 0.144 13.166 0.357 0.884 LGA I 72 I 72 16.164 3 0.081 0.145 18.594 0.000 0.000 LGA L 73 L 73 16.252 3 0.075 0.098 20.296 0.000 0.000 LGA E 74 E 74 22.013 4 0.626 0.594 23.437 0.000 0.000 LGA A 75 A 75 22.382 0 0.634 0.584 24.320 0.000 0.000 LGA S 76 S 76 25.857 1 0.083 0.080 28.395 0.000 0.000 LGA H 77 H 77 24.943 5 0.570 0.514 28.229 0.000 0.000 LGA M 78 M 78 29.277 3 0.147 0.234 30.246 0.000 0.000 LGA K 79 K 79 33.831 4 0.070 0.065 36.184 0.000 0.000 LGA G 80 G 80 33.362 0 0.381 0.381 33.362 0.000 0.000 LGA M 81 M 81 26.785 3 0.197 0.202 29.198 0.000 0.000 LGA K 82 K 82 28.670 4 0.071 0.110 31.946 0.000 0.000 LGA G 83 G 83 29.165 0 0.506 0.506 29.165 0.000 0.000 LGA A 84 A 84 26.467 0 0.044 0.075 27.278 0.000 0.000 LGA T 85 T 85 20.379 2 0.582 0.523 23.013 0.000 0.000 LGA A 86 A 86 18.349 0 0.139 0.193 19.276 0.000 0.000 LGA E 87 E 87 18.312 4 0.087 0.125 18.881 0.000 0.000 LGA I 88 I 88 16.530 3 0.027 0.046 19.675 0.000 0.000 LGA D 89 D 89 19.384 3 0.602 0.563 19.384 0.000 0.000 LGA S 90 S 90 17.817 1 0.038 0.075 18.530 0.000 0.000 LGA A 91 A 91 18.053 0 0.578 0.537 19.214 0.000 0.000 LGA E 92 E 92 14.351 4 0.609 0.559 15.086 0.000 0.000 LGA K 93 K 93 9.169 4 0.265 0.295 10.619 2.857 2.381 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 64 256 256 100.00 489 314 64.21 64 SUMMARY(RMSD_GDC): 11.343 11.282 11.367 15.400 9.112 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 64 64 4.0 14 2.25 24.219 20.552 0.596 LGA_LOCAL RMSD: 2.248 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.832 Number of assigned atoms: 64 Std_ASGN_ATOMS RMSD: 11.343 Standard rmsd on all 64 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.196619 * X + -0.960665 * Y + -0.196121 * Z + -6.163466 Y_new = 0.367142 * X + 0.113337 * Y + -0.923234 * Z + 3.400900 Z_new = 0.909147 * X + -0.253530 * Y + 0.330416 * Z + 7.633040 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.062471 -1.141231 -0.654485 [DEG: 118.1709 -65.3877 -37.4992 ] ZXZ: -0.209317 1.234052 1.842753 [DEG: -11.9930 70.7060 105.5820 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0579TS373_1-D2 REMARK 2: T0579-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0579TS373_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 64 64 4.0 14 2.25 20.552 11.34 REMARK ---------------------------------------------------------- MOLECULE T0579TS373_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0579 REMARK MODEL 1 REMARK PARENT N/A ATOM 30 N THR 30 -19.901 2.437 3.582 1.00 0.00 N ATOM 30 CA THR 30 -18.909 2.418 4.667 1.00 0.00 C ATOM 30 C THR 30 -17.766 1.466 4.306 1.00 0.00 C ATOM 30 O THR 30 -17.480 0.487 5.008 1.00 0.00 O ATOM 30 CB THR 30 -19.584 1.862 5.936 1.00 0.00 C ATOM 31 N THR 31 -17.128 1.787 3.197 1.00 0.00 N ATOM 31 CA THR 31 -15.997 1.010 2.666 1.00 0.00 C ATOM 31 C THR 31 -14.814 1.981 2.644 1.00 0.00 C ATOM 31 O THR 31 -14.784 2.962 1.889 1.00 0.00 O ATOM 31 CB THR 31 -16.311 0.598 1.216 1.00 0.00 C ATOM 32 N ALA 32 -13.849 1.675 3.490 1.00 0.00 N ATOM 32 CA ALA 32 -12.620 2.473 3.633 1.00 0.00 C ATOM 32 C ALA 32 -11.407 1.572 3.385 1.00 0.00 C ATOM 32 O ALA 32 -11.141 0.613 4.123 1.00 0.00 O ATOM 32 CB ALA 32 -12.517 2.945 5.094 1.00 0.00 C ATOM 33 N TYR 33 -10.688 1.912 2.333 1.00 0.00 N ATOM 33 CA TYR 33 -9.480 1.182 1.914 1.00 0.00 C ATOM 33 C TYR 33 -8.366 2.187 1.609 1.00 0.00 C ATOM 33 O TYR 33 -8.491 3.060 0.739 1.00 0.00 O ATOM 33 CB TYR 33 -9.799 0.452 0.597 1.00 0.00 C ATOM 34 N VAL 34 -7.285 2.035 2.350 1.00 0.00 N ATOM 34 CA VAL 34 -6.095 2.894 2.222 1.00 0.00 C ATOM 34 C VAL 34 -4.843 2.019 2.287 1.00 0.00 C ATOM 34 O VAL 34 -4.653 1.211 3.208 1.00 0.00 O ATOM 34 CB VAL 34 -6.081 3.957 3.334 1.00 0.00 C ATOM 35 N VAL 35 -4.003 2.210 1.288 1.00 0.00 N ATOM 35 CA VAL 35 -2.737 1.476 1.154 1.00 0.00 C ATOM 35 C VAL 35 -1.569 2.462 1.222 1.00 0.00 C ATOM 35 O VAL 35 -1.561 3.518 0.571 1.00 0.00 O ATOM 35 CB VAL 35 -2.710 0.825 -0.242 1.00 0.00 C ATOM 36 N SER 36 -0.592 2.083 2.024 1.00 0.00 N ATOM 36 CA SER 36 0.626 2.880 2.237 1.00 0.00 C ATOM 36 C SER 36 1.802 1.896 2.253 1.00 0.00 C ATOM 36 O SER 36 1.988 1.109 3.190 1.00 0.00 O ATOM 36 CB SER 36 0.505 3.555 3.617 1.00 0.00 C ATOM 37 N TYR 37 2.582 1.971 1.191 1.00 0.00 N ATOM 37 CA TYR 37 3.768 1.118 1.003 1.00 0.00 C ATOM 37 C TYR 37 4.989 2.009 0.765 1.00 0.00 C ATOM 37 O TYR 37 5.127 2.669 -0.274 1.00 0.00 O ATOM 37 CB TYR 37 3.530 0.245 -0.242 1.00 0.00 C ATOM 38 N THR 38 5.861 2.004 1.755 1.00 0.00 N ATOM 38 CA THR 38 7.105 2.790 1.734 1.00 0.00 C ATOM 38 C THR 38 8.202 1.840 2.222 1.00 0.00 C ATOM 38 O THR 38 8.262 1.456 3.398 1.00 0.00 O ATOM 38 CB THR 38 6.987 3.963 2.724 1.00 0.00 C ATOM 39 N PRO 39 9.060 1.480 1.286 1.00 0.00 N ATOM 39 CA PRO 39 10.192 0.573 1.538 1.00 0.00 C ATOM 39 C PRO 39 11.131 1.229 2.554 1.00 0.00 C ATOM 39 O PRO 39 12.088 0.620 3.051 1.00 0.00 O ATOM 39 CB PRO 39 10.947 0.403 0.212 1.00 0.00 C ATOM 40 N THR 40 10.828 2.480 2.840 1.00 0.00 N ATOM 40 CA THR 40 11.599 3.298 3.791 1.00 0.00 C ATOM 40 C THR 40 11.215 2.911 5.223 1.00 0.00 C ATOM 40 O THR 40 10.133 3.241 5.723 1.00 0.00 O ATOM 40 CB THR 40 11.204 4.767 3.564 1.00 0.00 C ATOM 41 N ASN 41 12.133 2.206 5.857 1.00 0.00 N ATOM 41 CA ASN 41 11.970 1.730 7.240 1.00 0.00 C ATOM 41 C ASN 41 11.779 2.941 8.155 1.00 0.00 C ATOM 41 O ASN 41 11.421 2.824 9.336 1.00 0.00 O ATOM 41 CB ASN 41 13.268 1.016 7.655 1.00 0.00 C ATOM 42 N GLY 42 12.029 4.099 7.573 1.00 0.00 N ATOM 42 CA GLY 42 11.909 5.389 8.269 1.00 0.00 C ATOM 42 C GLY 42 10.476 5.910 8.157 1.00 0.00 C ATOM 42 O GLY 42 10.051 6.443 7.122 1.00 0.00 O ATOM 43 N GLY 43 9.755 5.739 9.249 1.00 0.00 N ATOM 43 CA GLY 43 8.353 6.165 9.358 1.00 0.00 C ATOM 43 C GLY 43 7.438 4.938 9.348 1.00 0.00 C ATOM 43 O GLY 43 6.372 4.919 8.717 1.00 0.00 O ATOM 44 N GLN 44 7.888 3.924 10.064 1.00 0.00 N ATOM 44 CA GLN 44 7.167 2.649 10.192 1.00 0.00 C ATOM 44 C GLN 44 6.678 2.526 11.638 1.00 0.00 C ATOM 44 O GLN 44 7.444 2.238 12.567 1.00 0.00 O ATOM 44 CB GLN 44 8.171 1.513 9.923 1.00 0.00 C ATOM 45 N ARG 45 5.387 2.756 11.793 1.00 0.00 N ATOM 45 CA ARG 45 4.711 2.692 13.098 1.00 0.00 C ATOM 45 C ARG 45 4.252 1.250 13.322 1.00 0.00 C ATOM 45 O ARG 45 4.288 0.716 14.439 1.00 0.00 O ATOM 45 CB ARG 45 3.472 3.605 13.053 1.00 0.00 C ATOM 46 N VAL 46 3.827 0.645 12.228 1.00 0.00 N ATOM 46 CA VAL 46 3.343 -0.742 12.217 1.00 0.00 C ATOM 46 C VAL 46 4.550 -1.613 11.864 1.00 0.00 C ATOM 46 O VAL 46 4.523 -2.848 11.969 1.00 0.00 O ATOM 46 CB VAL 46 2.240 -0.940 11.160 1.00 0.00 C ATOM 47 N ASP 47 5.600 -0.931 11.446 1.00 0.00 N ATOM 47 CA ASP 47 6.865 -1.568 11.054 1.00 0.00 C ATOM 47 C ASP 47 6.582 -2.691 10.052 1.00 0.00 C ATOM 47 O ASP 47 7.288 -3.708 9.989 1.00 0.00 O ATOM 47 CB ASP 47 7.501 -2.189 12.313 1.00 0.00 C ATOM 48 N HIS 48 5.536 -2.472 9.279 1.00 0.00 N ATOM 48 CA HIS 48 5.087 -3.420 8.247 1.00 0.00 C ATOM 48 C HIS 48 5.600 -2.864 6.917 1.00 0.00 C ATOM 48 O HIS 48 5.577 -1.652 6.660 1.00 0.00 O ATOM 48 CB HIS 48 3.548 -3.446 8.205 1.00 0.00 C ATOM 49 N HIS 49 6.059 -3.782 6.088 1.00 0.00 N ATOM 49 CA HIS 49 6.599 -3.466 4.756 1.00 0.00 C ATOM 49 C HIS 49 5.519 -2.670 4.022 1.00 0.00 C ATOM 49 O HIS 49 5.799 -1.797 3.186 1.00 0.00 O ATOM 49 CB HIS 49 6.830 -4.782 3.993 1.00 0.00 C ATOM 50 N LYS 50 4.285 -2.999 4.359 1.00 0.00 N ATOM 50 CA LYS 50 3.098 -2.358 3.775 1.00 0.00 C ATOM 50 C LYS 50 1.959 -2.383 4.799 1.00 0.00 C ATOM 50 O LYS 50 1.720 -3.381 5.492 1.00 0.00 O ATOM 50 CB LYS 50 2.647 -3.159 2.539 1.00 0.00 C ATOM 51 N TRP 51 1.272 -1.257 4.868 1.00 0.00 N ATOM 51 CA TRP 51 0.137 -1.063 5.784 1.00 0.00 C ATOM 51 C TRP 51 -1.073 -0.886 4.863 1.00 0.00 C ATOM 51 O TRP 51 -1.228 0.131 4.175 1.00 0.00 O ATOM 51 CB TRP 51 0.337 0.230 6.593 1.00 0.00 C ATOM 52 N VAL 52 -1.914 -1.902 4.876 1.00 0.00 N ATOM 52 CA VAL 52 -3.142 -1.939 4.067 1.00 0.00 C ATOM 52 C VAL 52 -4.400 -2.124 4.921 1.00 0.00 C ATOM 52 O VAL 52 -4.469 -2.987 5.807 1.00 0.00 O ATOM 52 CB VAL 52 -3.049 -3.168 3.144 1.00 0.00 C ATOM 53 N ILE 53 -5.380 -1.292 4.626 1.00 0.00 N ATOM 53 CA ILE 53 -6.675 -1.296 5.323 1.00 0.00 C ATOM 53 C ILE 53 -7.731 -1.503 4.234 1.00 0.00 C ATOM 53 O ILE 53 -7.992 -0.626 3.399 1.00 0.00 O ATOM 53 CB ILE 53 -6.914 0.086 5.957 1.00 0.00 C ATOM 54 N GLN 54 -8.320 -2.683 4.270 1.00 0.00 N ATOM 54 CA GLN 54 -9.363 -3.091 3.316 1.00 0.00 C ATOM 54 C GLN 54 -10.148 -4.263 3.914 1.00 0.00 C ATOM 54 O GLN 54 -9.601 -5.135 4.603 1.00 0.00 O ATOM 54 CB GLN 54 -8.676 -3.618 2.042 1.00 0.00 C ATOM 55 N GLU 55 -11.436 -4.251 3.629 1.00 0.00 N ATOM 55 CA GLU 55 -12.373 -5.281 4.102 1.00 0.00 C ATOM 55 C GLU 55 -11.893 -6.643 3.599 1.00 0.00 C ATOM 55 O GLU 55 -11.924 -7.657 4.315 1.00 0.00 O ATOM 55 CB GLU 55 -13.762 -4.990 3.499 1.00 0.00 C ATOM 56 N GLU 56 -11.452 -6.630 2.354 1.00 0.00 N ATOM 56 CA GLU 56 -10.944 -7.830 1.674 1.00 0.00 C ATOM 56 C GLU 56 -9.732 -8.350 2.450 1.00 0.00 C ATOM 56 O GLU 56 -9.557 -9.560 2.660 1.00 0.00 O ATOM 56 CB GLU 56 -10.485 -7.454 0.249 1.00 0.00 C ATOM 57 N ILE 57 -8.910 -7.403 2.862 1.00 0.00 N ATOM 57 CA ILE 57 -7.685 -7.681 3.624 1.00 0.00 C ATOM 57 C ILE 57 -8.115 -8.391 4.909 1.00 0.00 C ATOM 57 O ILE 57 -7.466 -9.332 5.389 1.00 0.00 O ATOM 57 CB ILE 57 -7.006 -6.339 3.979 1.00 0.00 C ATOM 58 N LYS 58 -9.223 -7.909 5.442 1.00 0.00 N ATOM 58 CA LYS 58 -9.813 -8.443 6.677 1.00 0.00 C ATOM 58 C LYS 58 -10.293 -9.847 6.296 1.00 0.00 C ATOM 58 O LYS 58 -10.638 -10.677 7.150 1.00 0.00 O ATOM 58 CB LYS 58 -11.043 -7.593 7.050 1.00 0.00 C ATOM 59 N ASP 59 -10.303 -10.078 4.997 1.00 0.00 N ATOM 59 CA ASP 59 -10.727 -11.360 4.415 1.00 0.00 C ATOM 59 C ASP 59 -9.592 -12.366 4.621 1.00 0.00 C ATOM 59 O ASP 59 -9.737 -13.574 4.395 1.00 0.00 O ATOM 59 CB ASP 59 -10.911 -11.133 2.903 1.00 0.00 C ATOM 60 N ALA 60 -8.467 -11.828 5.055 1.00 0.00 N ATOM 60 CA ALA 60 -7.251 -12.613 5.321 1.00 0.00 C ATOM 60 C ALA 60 -7.381 -13.247 6.709 1.00 0.00 C ATOM 60 O ALA 60 -7.415 -12.563 7.741 1.00 0.00 O ATOM 60 CB ALA 60 -6.061 -11.639 5.354 1.00 0.00 C ATOM 61 N GLY 61 -7.450 -14.565 6.696 1.00 0.00 N ATOM 61 CA GLY 61 -7.577 -15.374 7.917 1.00 0.00 C ATOM 61 C GLY 61 -6.220 -15.359 8.625 1.00 0.00 C ATOM 61 O GLY 61 -6.070 -15.817 9.767 1.00 0.00 O ATOM 62 N ASP 62 -5.249 -14.822 7.912 1.00 0.00 N ATOM 62 CA ASP 62 -3.866 -14.707 8.399 1.00 0.00 C ATOM 62 C ASP 62 -3.585 -13.223 8.654 1.00 0.00 C ATOM 62 O ASP 62 -3.854 -12.350 7.817 1.00 0.00 O ATOM 62 CB ASP 62 -2.930 -15.186 7.274 1.00 0.00 C ATOM 63 N LYS 63 -3.039 -12.972 9.829 1.00 0.00 N ATOM 63 CA LYS 63 -2.686 -11.615 10.277 1.00 0.00 C ATOM 63 C LYS 63 -1.165 -11.460 10.181 1.00 0.00 C ATOM 63 O LYS 63 -0.397 -12.030 10.966 1.00 0.00 O ATOM 63 CB LYS 63 -3.094 -11.483 11.755 1.00 0.00 C ATOM 64 N THR 64 -0.764 -10.675 9.200 1.00 0.00 N ATOM 64 CA THR 64 0.655 -10.388 8.928 1.00 0.00 C ATOM 64 C THR 64 1.046 -9.172 9.771 1.00 0.00 C ATOM 64 O THR 64 2.224 -8.805 9.885 1.00 0.00 O ATOM 64 CB THR 64 0.801 -10.012 7.442 1.00 0.00 C ATOM 65 N LEU 65 0.027 -8.567 10.350 1.00 0.00 N ATOM 65 CA LEU 65 0.178 -7.379 11.204 1.00 0.00 C ATOM 65 C LEU 65 0.719 -7.838 12.562 1.00 0.00 C ATOM 65 O LEU 65 0.009 -8.432 13.384 1.00 0.00 O ATOM 65 CB LEU 65 -1.222 -6.778 11.427 1.00 0.00 C ATOM 66 N GLN 66 1.989 -7.542 12.765 1.00 0.00 N ATOM 66 CA GLN 66 2.708 -7.890 14.001 1.00 0.00 C ATOM 66 C GLN 66 2.506 -6.751 15.005 1.00 0.00 C ATOM 66 O GLN 66 2.846 -6.855 16.191 1.00 0.00 O ATOM 66 CB GLN 66 4.204 -7.984 13.653 1.00 0.00 C ATOM 67 N PRO 67 1.946 -5.672 14.490 1.00 0.00 N ATOM 67 CA PRO 67 1.661 -4.463 15.277 1.00 0.00 C ATOM 67 C PRO 67 0.914 -4.870 16.549 1.00 0.00 C ATOM 67 O PRO 67 0.899 -4.153 17.560 1.00 0.00 O ATOM 67 CB PRO 67 0.718 -3.564 14.457 1.00 0.00 C ATOM 68 N GLY 68 0.300 -6.035 16.464 1.00 0.00 N ATOM 68 CA GLY 68 -0.475 -6.617 17.569 1.00 0.00 C ATOM 68 C GLY 68 -1.969 -6.392 17.325 1.00 0.00 C ATOM 68 O GLY 68 -2.713 -5.916 18.196 1.00 0.00 O ATOM 69 N ASP 69 -2.376 -6.748 16.121 1.00 0.00 N ATOM 69 CA ASP 69 -3.770 -6.618 15.676 1.00 0.00 C ATOM 69 C ASP 69 -4.112 -5.130 15.564 1.00 0.00 C ATOM 69 O ASP 69 -5.229 -4.689 15.864 1.00 0.00 O ATOM 69 CB ASP 69 -4.670 -7.258 16.750 1.00 0.00 C ATOM 70 N GLN 70 -3.118 -4.379 15.127 1.00 0.00 N ATOM 70 CA GLN 70 -3.231 -2.923 14.945 1.00 0.00 C ATOM 70 C GLN 70 -2.630 -2.539 13.590 1.00 0.00 C ATOM 70 O GLN 70 -1.513 -2.937 13.230 1.00 0.00 O ATOM 70 CB GLN 70 -2.382 -2.274 16.054 1.00 0.00 C ATOM 71 N VAL 71 -3.403 -1.758 12.860 1.00 0.00 N ATOM 71 CA VAL 71 -3.020 -1.270 11.525 1.00 0.00 C ATOM 71 C VAL 71 -3.051 0.260 11.531 1.00 0.00 C ATOM 71 O VAL 71 -3.999 0.896 12.013 1.00 0.00 O ATOM 71 CB VAL 71 -4.055 -1.723 10.480 1.00 0.00 C ATOM 72 N ILE 72 -1.991 0.823 10.982 1.00 0.00 N ATOM 72 CA ILE 72 -1.815 2.282 10.883 1.00 0.00 C ATOM 72 C ILE 72 -1.283 2.790 9.541 1.00 0.00 C ATOM 72 O ILE 72 -0.221 2.376 9.057 1.00 0.00 O ATOM 72 CB ILE 72 -0.766 2.671 11.942 1.00 0.00 C ATOM 73 N LEU 73 -2.053 3.695 8.964 1.00 0.00 N ATOM 73 CA LEU 73 -1.730 4.316 7.670 1.00 0.00 C ATOM 73 C LEU 73 -1.855 5.818 7.926 1.00 0.00 C ATOM 73 O LEU 73 -2.956 6.376 8.046 1.00 0.00 O ATOM 73 CB LEU 73 -2.751 3.927 6.587 1.00 0.00 C ATOM 74 N GLU 74 -0.697 6.447 8.004 1.00 0.00 N ATOM 74 CA GLU 74 -0.586 7.893 8.244 1.00 0.00 C ATOM 74 C GLU 74 0.528 8.515 7.397 1.00 0.00 C ATOM 74 O GLU 74 1.648 7.992 7.297 1.00 0.00 O ATOM 74 CB GLU 74 -0.234 8.102 9.728 1.00 0.00 C ATOM 75 N ALA 75 0.185 9.638 6.795 1.00 0.00 N ATOM 75 CA ALA 75 1.103 10.402 5.933 1.00 0.00 C ATOM 75 C ALA 75 1.909 11.267 6.904 1.00 0.00 C ATOM 75 O ALA 75 3.012 11.744 6.599 1.00 0.00 O ATOM 75 CB ALA 75 0.251 11.302 5.021 1.00 0.00 C ATOM 76 N SER 76 1.324 11.448 8.074 1.00 0.00 N ATOM 76 CA SER 76 1.925 12.246 9.153 1.00 0.00 C ATOM 76 C SER 76 1.975 11.327 10.378 1.00 0.00 C ATOM 76 O SER 76 1.043 10.566 10.667 1.00 0.00 O ATOM 76 CB SER 76 0.985 13.429 9.453 1.00 0.00 C ATOM 77 N HIS 77 3.088 11.428 11.081 1.00 0.00 N ATOM 77 CA HIS 77 3.346 10.637 12.296 1.00 0.00 C ATOM 77 C HIS 77 2.427 11.151 13.408 1.00 0.00 C ATOM 77 O HIS 77 2.538 12.293 13.876 1.00 0.00 O ATOM 77 CB HIS 77 4.804 10.877 12.719 1.00 0.00 C ATOM 78 N MET 78 1.525 10.275 13.811 1.00 0.00 N ATOM 78 CA MET 78 0.542 10.563 14.870 1.00 0.00 C ATOM 78 C MET 78 0.746 9.589 16.034 1.00 0.00 C ATOM 78 O MET 78 0.930 8.378 15.851 1.00 0.00 O ATOM 78 CB MET 78 -0.866 10.317 14.299 1.00 0.00 C ATOM 79 N LYS 79 0.705 10.156 17.225 1.00 0.00 N ATOM 79 CA LYS 79 0.877 9.405 18.478 1.00 0.00 C ATOM 79 C LYS 79 -0.424 9.517 19.277 1.00 0.00 C ATOM 79 O LYS 79 -0.950 10.611 19.524 1.00 0.00 O ATOM 79 CB LYS 79 2.005 10.078 19.281 1.00 0.00 C ATOM 80 N GLY 80 -0.917 8.357 19.668 1.00 0.00 N ATOM 80 CA GLY 80 -2.158 8.234 20.446 1.00 0.00 C ATOM 80 C GLY 80 -3.265 7.668 19.552 1.00 0.00 C ATOM 80 O GLY 80 -4.229 8.356 19.188 1.00 0.00 O ATOM 81 N MET 81 -3.091 6.403 19.216 1.00 0.00 N ATOM 81 CA MET 81 -4.034 5.664 18.364 1.00 0.00 C ATOM 81 C MET 81 -5.150 5.029 19.200 1.00 0.00 C ATOM 81 O MET 81 -6.139 4.499 18.677 1.00 0.00 O ATOM 81 CB MET 81 -3.246 4.521 17.702 1.00 0.00 C ATOM 82 N LYS 82 -4.956 5.103 20.503 1.00 0.00 N ATOM 82 CA LYS 82 -5.903 4.558 21.488 1.00 0.00 C ATOM 82 C LYS 82 -7.160 5.430 21.486 1.00 0.00 C ATOM 82 O LYS 82 -7.150 6.598 21.903 1.00 0.00 O ATOM 82 CB LYS 82 -5.253 4.638 22.880 1.00 0.00 C ATOM 83 N GLY 83 -8.232 4.827 21.004 1.00 0.00 N ATOM 83 CA GLY 83 -9.545 5.483 20.910 1.00 0.00 C ATOM 83 C GLY 83 -10.586 4.476 20.414 1.00 0.00 C ATOM 83 O GLY 83 -10.932 3.500 21.094 1.00 0.00 O ATOM 84 N ALA 84 -11.066 4.746 19.214 1.00 0.00 N ATOM 84 CA ALA 84 -12.075 3.910 18.547 1.00 0.00 C ATOM 84 C ALA 84 -11.324 2.776 17.844 1.00 0.00 C ATOM 84 O ALA 84 -10.271 2.974 17.221 1.00 0.00 O ATOM 84 CB ALA 84 -12.792 4.746 17.473 1.00 0.00 C ATOM 85 N THR 85 -11.896 1.592 17.965 1.00 0.00 N ATOM 85 CA THR 85 -11.342 0.367 17.367 1.00 0.00 C ATOM 85 C THR 85 -11.114 0.711 15.894 1.00 0.00 C ATOM 85 O THR 85 -10.363 0.040 15.170 1.00 0.00 O ATOM 85 CB THR 85 -12.392 -0.751 17.476 1.00 0.00 C ATOM 86 N ALA 86 -11.783 1.771 15.479 1.00 0.00 N ATOM 86 CA ALA 86 -11.711 2.277 14.100 1.00 0.00 C ATOM 86 C ALA 86 -11.661 3.807 14.129 1.00 0.00 C ATOM 86 O ALA 86 -12.592 4.486 14.584 1.00 0.00 O ATOM 86 CB ALA 86 -12.994 1.861 13.358 1.00 0.00 C ATOM 87 N GLU 87 -10.551 4.320 13.632 1.00 0.00 N ATOM 87 CA GLU 87 -10.295 5.767 13.563 1.00 0.00 C ATOM 87 C GLU 87 -10.035 6.045 12.080 1.00 0.00 C ATOM 87 O GLU 87 -9.022 5.627 11.502 1.00 0.00 O ATOM 87 CB GLU 87 -9.022 6.084 14.368 1.00 0.00 C ATOM 88 N ILE 88 -10.975 6.759 11.491 1.00 0.00 N ATOM 88 CA ILE 88 -10.924 7.140 10.071 1.00 0.00 C ATOM 88 C ILE 88 -11.001 8.656 9.873 1.00 0.00 C ATOM 88 O ILE 88 -11.985 9.315 10.234 1.00 0.00 O ATOM 88 CB ILE 88 -12.172 6.543 9.395 1.00 0.00 C ATOM 89 N ASP 89 -9.937 9.179 9.294 1.00 0.00 N ATOM 89 CA ASP 89 -9.801 10.617 9.008 1.00 0.00 C ATOM 89 C ASP 89 -9.494 10.661 7.512 1.00 0.00 C ATOM 89 O ASP 89 -8.374 10.374 7.062 1.00 0.00 O ATOM 89 CB ASP 89 -8.607 11.172 9.802 1.00 0.00 C ATOM 90 N SER 90 -10.518 11.028 6.765 1.00 0.00 N ATOM 90 CA SER 90 -10.442 11.138 5.301 1.00 0.00 C ATOM 90 C SER 90 -11.135 12.443 4.892 1.00 0.00 C ATOM 90 O SER 90 -12.242 12.768 5.342 1.00 0.00 O ATOM 90 CB SER 90 -11.246 9.972 4.694 1.00 0.00 C ATOM 91 N ALA 91 -10.449 13.171 4.031 1.00 0.00 N ATOM 91 CA ALA 91 -10.930 14.462 3.506 1.00 0.00 C ATOM 91 C ALA 91 -11.501 15.243 4.694 1.00 0.00 C ATOM 91 O ALA 91 -12.091 16.321 4.548 1.00 0.00 O ATOM 91 CB ALA 91 -12.085 14.188 2.524 1.00 0.00 C ATOM 92 N GLU 92 -11.307 14.664 5.864 1.00 0.00 N ATOM 92 CA GLU 92 -11.773 15.243 7.135 1.00 0.00 C ATOM 92 C GLU 92 -10.533 15.924 7.717 1.00 0.00 C ATOM 92 O GLU 92 -10.615 16.906 8.470 1.00 0.00 O ATOM 92 CB GLU 92 -12.215 14.105 8.072 1.00 0.00 C ATOM 93 N LYS 93 -9.393 15.373 7.343 1.00 0.00 N ATOM 93 CA LYS 93 -8.082 15.869 7.785 1.00 0.00 C ATOM 93 C LYS 93 -7.277 16.172 6.519 1.00 0.00 C ATOM 93 O LYS 93 -7.507 15.602 5.442 1.00 0.00 O ATOM 93 CB LYS 93 -7.382 14.745 8.571 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 314 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 77.93 50.0 126 100.0 126 ARMSMC SECONDARY STRUCTURE . . 68.29 55.8 52 100.0 52 ARMSMC SURFACE . . . . . . . . 84.96 42.7 82 100.0 82 ARMSMC BURIED . . . . . . . . 62.78 63.6 44 100.0 44 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 52 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 47 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 23 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 35 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 38 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 32 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 15 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 14 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 4 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 7 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 1 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 11.34 (Number of atoms: 64) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 11.34 64 100.0 64 CRMSCA CRN = ALL/NP . . . . . 0.1772 CRMSCA SECONDARY STRUCTURE . . 10.38 26 100.0 26 CRMSCA SURFACE . . . . . . . . 11.75 42 100.0 42 CRMSCA BURIED . . . . . . . . 10.52 22 100.0 22 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 11.37 314 100.0 314 CRMSMC SECONDARY STRUCTURE . . 10.58 130 100.0 130 CRMSMC SURFACE . . . . . . . . 11.80 205 100.0 205 CRMSMC BURIED . . . . . . . . 10.51 109 100.0 109 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.73 58 8.2 710 CRMSSC RELIABLE SIDE CHAINS . 11.73 58 8.6 674 CRMSSC SECONDARY STRUCTURE . . 10.72 26 8.3 312 CRMSSC SURFACE . . . . . . . . 12.61 37 8.0 464 CRMSSC BURIED . . . . . . . . 9.99 21 8.5 246 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.37 314 32.5 966 CRMSALL SECONDARY STRUCTURE . . 10.58 130 31.2 416 CRMSALL SURFACE . . . . . . . . 11.80 205 32.4 632 CRMSALL BURIED . . . . . . . . 10.51 109 32.6 334 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.267 1.000 0.500 64 100.0 64 ERRCA SECONDARY STRUCTURE . . 9.484 1.000 0.500 26 100.0 26 ERRCA SURFACE . . . . . . . . 10.826 1.000 0.500 42 100.0 42 ERRCA BURIED . . . . . . . . 9.200 1.000 0.500 22 100.0 22 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.339 1.000 0.500 314 100.0 314 ERRMC SECONDARY STRUCTURE . . 9.680 1.000 0.500 130 100.0 130 ERRMC SURFACE . . . . . . . . 10.863 1.000 0.500 205 100.0 205 ERRMC BURIED . . . . . . . . 9.354 1.000 0.500 109 100.0 109 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.688 1.000 0.500 58 8.2 710 ERRSC RELIABLE SIDE CHAINS . 10.688 1.000 0.500 58 8.6 674 ERRSC SECONDARY STRUCTURE . . 9.779 1.000 0.500 26 8.3 312 ERRSC SURFACE . . . . . . . . 11.736 1.000 0.500 37 8.0 464 ERRSC BURIED . . . . . . . . 8.841 1.000 0.500 21 8.5 246 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.339 1.000 0.500 314 32.5 966 ERRALL SECONDARY STRUCTURE . . 9.680 1.000 0.500 130 31.2 416 ERRALL SURFACE . . . . . . . . 10.863 1.000 0.500 205 32.4 632 ERRALL BURIED . . . . . . . . 9.354 1.000 0.500 109 32.6 334 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 3 4 8 30 64 64 DISTCA CA (P) 1.56 4.69 6.25 12.50 46.88 64 DISTCA CA (RMS) 0.87 1.22 1.65 2.93 6.53 DISTCA ALL (N) 1 9 19 43 147 314 966 DISTALL ALL (P) 0.10 0.93 1.97 4.45 15.22 966 DISTALL ALL (RMS) 0.87 1.50 2.13 3.35 6.57 DISTALL END of the results output