####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 60 ( 292), selected 60 , name T0579TS373_1-D1 # Molecule2: number of CA atoms 60 ( 911), selected 60 , name T0579-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0579TS373_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 94 - 116 4.72 18.68 LCS_AVERAGE: 31.89 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 94 - 106 1.80 19.43 LCS_AVERAGE: 14.53 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 94 - 102 0.98 19.48 LCS_AVERAGE: 9.39 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 60 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 5 8 17 3 4 5 6 8 9 10 12 13 17 18 20 22 25 29 29 30 32 34 35 LCS_GDT K 2 K 2 5 8 17 3 4 5 6 8 9 10 13 15 17 21 23 24 25 29 29 30 32 34 35 LCS_GDT V 3 V 3 5 8 17 3 4 5 6 8 9 9 12 13 17 18 20 23 25 27 29 30 32 34 35 LCS_GDT G 4 G 4 5 8 17 3 5 5 6 8 9 11 13 19 19 21 23 24 25 27 28 29 32 33 35 LCS_GDT S 5 S 5 6 8 17 4 5 6 7 8 9 13 16 19 19 21 23 24 25 27 29 30 32 34 35 LCS_GDT Q 6 Q 6 6 8 17 4 5 6 7 8 9 13 16 19 19 21 23 24 25 27 28 29 31 33 35 LCS_GDT V 7 V 7 6 8 17 4 5 6 7 8 9 13 16 19 19 21 23 24 25 27 28 29 31 33 35 LCS_GDT I 8 I 8 6 8 17 4 5 6 7 8 9 13 16 19 19 21 23 24 25 27 28 29 31 31 33 LCS_GDT I 9 I 9 6 8 17 4 5 6 7 8 9 13 16 19 19 21 23 24 25 27 28 29 31 31 33 LCS_GDT N 10 N 10 6 8 17 4 5 6 7 8 9 13 16 19 19 21 23 24 25 27 28 29 31 31 33 LCS_GDT T 11 T 11 6 8 17 4 6 6 7 8 9 13 16 19 19 21 23 24 25 27 28 29 31 31 32 LCS_GDT S 12 S 12 6 8 17 3 6 6 7 7 8 13 16 19 19 21 22 23 25 27 28 29 31 31 32 LCS_GDT H 13 H 13 6 8 17 3 6 6 7 7 8 9 9 11 12 14 15 16 19 23 24 24 26 29 31 LCS_GDT M 14 M 14 6 8 17 3 6 6 7 7 8 9 11 14 15 17 18 20 21 23 26 27 29 31 32 LCS_GDT K 15 K 15 6 8 17 3 6 6 7 7 8 11 13 14 15 17 21 23 24 27 28 29 31 31 32 LCS_GDT G 16 G 16 6 10 17 3 6 6 7 8 10 13 16 19 19 21 22 23 25 27 28 29 31 31 32 LCS_GDT M 17 M 17 5 10 17 3 4 5 7 8 10 13 16 19 19 21 23 24 25 27 28 29 31 31 32 LCS_GDT K 18 K 18 4 10 16 3 3 5 7 8 10 10 10 11 18 19 23 24 25 27 28 29 31 31 32 LCS_GDT G 19 G 19 4 10 15 3 4 5 7 8 10 10 10 13 18 19 23 24 25 27 28 29 31 31 33 LCS_GDT A 20 A 20 6 10 15 5 5 5 7 7 10 10 13 15 18 19 22 24 25 27 28 29 31 31 33 LCS_GDT E 21 E 21 6 10 15 5 5 6 7 8 10 10 11 15 18 19 23 24 25 27 28 29 31 31 33 LCS_GDT A 22 A 22 6 10 15 5 5 6 7 8 10 13 15 18 19 21 23 24 25 27 28 29 31 31 33 LCS_GDT T 23 T 23 6 10 15 5 5 6 7 8 10 13 16 19 19 21 23 24 25 27 28 29 31 31 33 LCS_GDT V 24 V 24 6 10 15 5 5 6 7 8 10 13 16 19 19 21 23 24 25 27 28 30 32 34 35 LCS_GDT T 25 T 25 6 10 15 4 4 6 7 8 10 11 13 19 19 21 23 24 25 27 29 30 32 34 35 LCS_GDT G 26 G 26 4 8 15 4 4 6 7 7 8 11 13 15 18 21 23 24 25 27 29 30 32 34 35 LCS_GDT A 27 A 27 4 6 15 4 4 4 4 6 9 10 12 15 17 18 20 22 25 29 29 30 32 34 35 LCS_GDT Y 28 Y 28 4 6 15 4 4 4 6 7 8 10 11 13 17 18 20 22 25 29 29 30 32 34 35 LCS_GDT D 29 D 29 3 5 15 0 0 3 4 6 7 9 9 13 16 18 20 22 25 29 29 30 32 34 35 LCS_GDT T 94 T 94 9 13 23 3 6 10 11 11 12 13 14 19 19 21 23 24 25 27 28 29 31 31 33 LCS_GDT T 95 T 95 9 13 23 3 6 10 11 11 12 13 16 19 19 21 23 24 25 27 28 29 31 31 32 LCS_GDT V 96 V 96 9 13 23 3 6 7 11 11 12 13 16 19 19 21 23 24 25 27 28 29 31 31 33 LCS_GDT Y 97 Y 97 9 13 23 3 6 10 11 11 12 13 16 19 19 21 23 24 25 27 28 29 31 31 33 LCS_GDT M 98 M 98 9 13 23 3 6 10 11 11 12 13 16 19 19 21 23 24 25 27 28 29 31 32 33 LCS_GDT V 99 V 99 9 13 23 4 6 10 11 11 12 13 13 15 18 18 20 22 24 26 27 29 31 34 35 LCS_GDT D 100 D 100 9 13 23 4 6 10 11 11 12 13 13 15 18 18 20 22 24 29 29 30 32 34 35 LCS_GDT Y 101 Y 101 9 13 23 4 6 10 11 11 12 13 13 15 18 18 20 22 25 29 29 30 32 34 35 LCS_GDT T 102 T 102 9 13 23 4 6 10 11 11 12 13 13 15 18 18 20 22 25 29 29 30 32 34 35 LCS_GDT S 103 S 103 7 13 23 4 6 7 10 10 12 13 13 15 18 18 20 22 25 29 29 30 32 34 35 LCS_GDT T 104 T 104 3 13 23 3 6 10 11 11 12 13 13 15 18 18 20 22 25 29 29 30 32 34 35 LCS_GDT T 105 T 105 3 13 23 3 3 4 4 6 10 13 13 13 13 18 20 22 25 29 29 30 32 34 35 LCS_GDT S 106 S 106 3 13 23 3 3 10 11 11 12 13 13 15 18 18 20 22 25 29 29 30 32 34 35 LCS_GDT G 107 G 107 6 7 23 3 6 7 7 8 9 11 11 15 18 18 20 22 25 29 29 30 31 34 35 LCS_GDT E 108 E 108 6 7 23 3 6 7 7 8 9 11 13 15 18 18 19 22 25 29 29 30 31 34 35 LCS_GDT K 109 K 109 6 7 23 3 6 7 7 7 7 11 13 15 18 18 20 22 25 29 29 30 31 33 35 LCS_GDT V 110 V 110 6 7 23 3 6 7 7 7 11 12 13 15 18 18 20 22 25 29 29 30 32 34 35 LCS_GDT K 111 K 111 6 7 23 3 6 7 7 7 8 10 12 15 18 18 20 22 25 29 29 30 32 34 35 LCS_GDT N 112 N 112 6 7 23 3 6 7 7 7 8 10 11 15 18 18 20 22 25 29 29 30 32 34 35 LCS_GDT H 113 H 113 4 7 23 3 3 4 6 7 8 10 11 13 16 18 20 22 25 29 29 30 32 34 35 LCS_GDT K 114 K 114 4 6 23 3 3 5 5 6 8 10 11 13 16 18 20 22 25 29 29 30 32 34 35 LCS_GDT W 115 W 115 4 6 23 3 4 5 5 7 8 9 11 13 16 17 20 22 25 29 29 30 32 34 35 LCS_GDT V 116 V 116 3 6 23 2 4 5 5 7 8 10 11 13 16 18 20 22 25 29 29 30 32 34 35 LCS_GDT T 117 T 117 5 6 21 5 5 5 6 7 8 10 12 13 16 18 20 22 25 29 29 30 32 34 35 LCS_GDT E 118 E 118 5 6 21 5 5 5 6 6 7 10 12 13 15 17 20 22 25 29 29 30 32 34 35 LCS_GDT D 119 D 119 5 6 21 5 5 5 6 7 8 10 12 13 16 18 20 22 25 29 29 30 32 34 35 LCS_GDT E 120 E 120 5 6 21 5 5 5 5 6 7 10 12 13 16 18 20 22 25 29 29 30 32 34 35 LCS_GDT L 121 L 121 5 6 20 5 5 5 5 6 7 8 10 13 15 17 18 22 25 29 29 30 32 34 35 LCS_GDT S 122 S 122 3 6 15 0 3 3 4 6 6 7 10 13 15 17 18 19 20 29 29 30 32 34 35 LCS_GDT A 123 A 123 3 3 15 0 3 3 4 4 5 10 12 13 15 17 18 20 23 29 29 30 32 34 35 LCS_GDT K 124 K 124 3 3 15 0 0 3 3 3 5 7 9 12 13 16 18 18 19 20 23 24 27 28 30 LCS_AVERAGE LCS_A: 18.60 ( 9.39 14.53 31.89 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 10 11 11 12 13 16 19 19 21 23 24 25 29 29 30 32 34 35 GDT PERCENT_AT 8.33 10.00 16.67 18.33 18.33 20.00 21.67 26.67 31.67 31.67 35.00 38.33 40.00 41.67 48.33 48.33 50.00 53.33 56.67 58.33 GDT RMS_LOCAL 0.29 0.55 0.94 1.09 1.09 1.42 1.80 3.06 3.49 3.48 3.79 4.25 4.38 4.52 5.73 5.73 5.78 6.16 6.40 6.67 GDT RMS_ALL_AT 15.89 19.70 19.43 19.39 19.39 19.33 19.43 18.11 17.98 18.08 17.89 16.72 16.57 16.76 17.83 17.83 17.89 17.11 17.56 16.63 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 8.753 4 0.012 0.097 10.205 1.429 1.071 LGA K 2 K 2 7.585 4 0.043 0.064 8.169 7.262 5.132 LGA V 3 V 3 10.285 2 0.571 0.520 12.526 3.095 1.769 LGA G 4 G 4 6.006 0 0.554 0.554 7.682 20.476 20.476 LGA S 5 S 5 2.494 1 0.093 0.148 3.718 57.500 49.127 LGA Q 6 Q 6 1.514 4 0.119 0.163 1.707 79.405 44.339 LGA V 7 V 7 2.164 2 0.083 0.132 3.805 57.500 41.020 LGA I 8 I 8 3.566 3 0.088 0.092 3.996 53.810 32.321 LGA I 9 I 9 3.307 3 0.019 0.042 5.133 40.714 24.286 LGA N 10 N 10 3.455 3 0.579 0.604 4.188 55.476 32.381 LGA T 11 T 11 1.236 2 0.657 0.599 4.088 64.048 44.762 LGA S 12 S 12 3.626 1 0.028 0.036 5.687 40.952 36.825 LGA H 13 H 13 10.137 5 0.176 0.184 12.569 1.905 0.762 LGA M 14 M 14 8.044 3 0.050 0.090 8.615 16.548 8.869 LGA K 15 K 15 5.705 4 0.053 0.058 7.725 32.024 15.026 LGA G 16 G 16 2.942 0 0.064 0.064 3.780 50.238 50.238 LGA M 17 M 17 3.033 3 0.351 0.331 7.189 37.738 23.512 LGA K 18 K 18 7.103 4 0.572 0.516 9.645 11.667 7.090 LGA G 19 G 19 10.657 0 0.653 0.653 11.710 0.714 0.714 LGA A 20 A 20 9.706 0 0.176 0.246 9.845 2.738 2.286 LGA E 21 E 21 7.992 4 0.048 0.051 9.058 8.333 3.862 LGA A 22 A 22 4.418 0 0.105 0.162 5.600 31.786 34.095 LGA T 23 T 23 3.550 2 0.028 0.036 4.525 55.833 36.395 LGA V 24 V 24 2.635 2 0.112 0.122 5.244 44.405 34.626 LGA T 25 T 25 6.289 2 0.657 0.590 7.417 19.762 12.721 LGA G 26 G 26 8.661 0 0.049 0.049 11.490 2.500 2.500 LGA A 27 A 27 13.023 0 0.122 0.130 13.868 0.000 0.000 LGA Y 28 Y 28 17.078 7 0.628 0.568 19.443 0.000 0.000 LGA D 29 D 29 20.779 3 0.411 0.380 21.491 0.000 0.000 LGA T 94 T 94 5.757 2 0.638 0.587 7.855 15.833 12.789 LGA T 95 T 95 4.079 2 0.113 0.121 4.690 52.619 34.558 LGA V 96 V 96 3.873 2 0.077 0.146 6.636 47.143 28.844 LGA Y 97 Y 97 2.020 7 0.058 0.107 5.257 55.595 21.151 LGA M 98 M 98 3.702 3 0.018 0.024 5.429 40.119 28.155 LGA V 99 V 99 9.982 2 0.071 0.137 12.191 1.905 1.088 LGA D 100 D 100 14.402 3 0.053 0.068 17.502 0.000 0.000 LGA Y 101 Y 101 21.190 7 0.109 0.169 23.250 0.000 0.000 LGA T 102 T 102 27.622 2 0.084 0.113 30.216 0.000 0.000 LGA S 103 S 103 31.274 1 0.182 0.188 34.601 0.000 0.000 LGA T 104 T 104 38.318 2 0.351 0.334 40.938 0.000 0.000 LGA T 105 T 105 39.653 2 0.092 0.097 43.163 0.000 0.000 LGA S 106 S 106 43.238 1 0.192 0.196 46.013 0.000 0.000 LGA G 107 G 107 42.227 0 0.485 0.485 42.227 0.000 0.000 LGA E 108 E 108 36.931 4 0.038 0.076 38.571 0.000 0.000 LGA K 109 K 109 31.845 4 0.040 0.081 33.995 0.000 0.000 LGA V 110 V 110 26.235 2 0.081 0.128 28.054 0.000 0.000 LGA K 111 K 111 20.669 4 0.237 0.342 22.863 0.000 0.000 LGA N 112 N 112 16.333 3 0.120 0.126 18.883 0.000 0.000 LGA H 113 H 113 22.101 5 0.129 0.184 24.588 0.000 0.000 LGA K 114 K 114 20.270 4 0.018 0.031 23.089 0.000 0.000 LGA W 115 W 115 22.136 9 0.595 0.567 23.145 0.000 0.000 LGA V 116 V 116 19.259 2 0.613 0.579 19.920 0.000 0.000 LGA T 117 T 117 18.818 2 0.586 0.570 20.866 0.000 0.000 LGA E 118 E 118 20.597 4 0.044 0.051 21.276 0.000 0.000 LGA D 119 D 119 21.474 3 0.102 0.107 21.702 0.000 0.000 LGA E 120 E 120 20.043 4 0.158 0.164 20.473 0.000 0.000 LGA L 121 L 121 19.766 3 0.649 0.590 20.455 0.000 0.000 LGA S 122 S 122 20.982 1 0.674 0.614 22.883 0.000 0.000 LGA A 123 A 123 14.832 0 0.649 0.591 16.955 0.000 0.000 LGA K 124 K 124 16.656 6 - - 17.538 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 60 240 237 98.75 456 292 64.04 60 SUMMARY(RMSD_GDC): 12.779 12.727 12.793 16.851 11.547 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 60 60 4.0 16 3.06 25.833 23.274 0.506 LGA_LOCAL RMSD: 3.065 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.115 Number of assigned atoms: 60 Std_ASGN_ATOMS RMSD: 12.779 Standard rmsd on all 60 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.669844 * X + -0.488275 * Y + -0.559371 * Z + -6.767933 Y_new = -0.131571 * X + 0.819494 * Y + -0.557780 * Z + 4.621204 Z_new = 0.730751 * X + -0.300029 * Y + -0.613176 * Z + -7.172845 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.947642 -0.819422 -2.686539 [DEG: -168.8875 -46.9494 -153.9273 ] ZXZ: -0.786822 2.230871 1.960387 [DEG: -45.0816 127.8195 112.3219 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0579TS373_1-D1 REMARK 2: T0579-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0579TS373_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 60 60 4.0 16 3.06 23.274 12.78 REMARK ---------------------------------------------------------- MOLECULE T0579TS373_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0579 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 CA MET 1 -10.567 18.772 -8.993 1.00 0.00 C ATOM 1 C MET 1 -10.398 19.927 -9.982 1.00 0.00 C ATOM 1 O MET 1 -11.351 20.380 -10.631 1.00 0.00 O ATOM 1 CB MET 1 -9.874 17.511 -9.543 1.00 0.00 C ATOM 2 N LYS 2 -9.163 20.383 -10.072 1.00 0.00 N ATOM 2 CA LYS 2 -8.778 21.490 -10.962 1.00 0.00 C ATOM 2 C LYS 2 -8.797 20.927 -12.387 1.00 0.00 C ATOM 2 O LYS 2 -8.560 19.736 -12.625 1.00 0.00 O ATOM 2 CB LYS 2 -7.336 21.911 -10.634 1.00 0.00 C ATOM 3 N VAL 3 -9.085 21.820 -13.316 1.00 0.00 N ATOM 3 CA VAL 3 -9.157 21.494 -14.750 1.00 0.00 C ATOM 3 C VAL 3 -7.893 20.701 -15.090 1.00 0.00 C ATOM 3 O VAL 3 -7.700 20.224 -16.218 1.00 0.00 O ATOM 3 CB VAL 3 -9.153 22.796 -15.564 1.00 0.00 C ATOM 4 N GLY 4 -7.048 20.581 -14.083 1.00 0.00 N ATOM 4 CA GLY 4 -5.772 19.858 -14.190 1.00 0.00 C ATOM 4 C GLY 4 -5.034 19.833 -12.850 1.00 0.00 C ATOM 4 O GLY 4 -4.508 20.849 -12.369 1.00 0.00 O ATOM 5 N SER 5 -5.013 18.649 -12.269 1.00 0.00 N ATOM 5 CA SER 5 -4.357 18.401 -10.975 1.00 0.00 C ATOM 5 C SER 5 -3.362 17.252 -11.166 1.00 0.00 C ATOM 5 O SER 5 -3.697 16.169 -11.662 1.00 0.00 O ATOM 5 CB SER 5 -5.435 17.940 -9.975 1.00 0.00 C ATOM 6 N GLN 6 -2.137 17.524 -10.758 1.00 0.00 N ATOM 6 CA GLN 6 -1.024 16.562 -10.849 1.00 0.00 C ATOM 6 C GLN 6 -0.261 16.485 -9.526 1.00 0.00 C ATOM 6 O GLN 6 0.387 17.443 -9.086 1.00 0.00 O ATOM 6 CB GLN 6 -0.054 17.086 -11.922 1.00 0.00 C ATOM 7 N VAL 7 -0.361 15.319 -8.913 1.00 0.00 N ATOM 7 CA VAL 7 0.293 15.029 -7.629 1.00 0.00 C ATOM 7 C VAL 7 0.869 13.612 -7.702 1.00 0.00 C ATOM 7 O VAL 7 0.209 12.657 -8.134 1.00 0.00 O ATOM 7 CB VAL 7 -0.743 15.098 -6.493 1.00 0.00 C ATOM 8 N ILE 8 2.111 13.513 -7.270 1.00 0.00 N ATOM 8 CA ILE 8 2.856 12.245 -7.250 1.00 0.00 C ATOM 8 C ILE 8 3.382 12.035 -5.831 1.00 0.00 C ATOM 8 O ILE 8 3.873 12.961 -5.168 1.00 0.00 O ATOM 8 CB ILE 8 4.053 12.381 -8.208 1.00 0.00 C ATOM 9 N ILE 9 3.264 10.795 -5.394 1.00 0.00 N ATOM 9 CA ILE 9 3.707 10.372 -4.058 1.00 0.00 C ATOM 9 C ILE 9 4.763 9.272 -4.186 1.00 0.00 C ATOM 9 O ILE 9 4.518 8.183 -4.724 1.00 0.00 O ATOM 9 CB ILE 9 2.476 9.814 -3.319 1.00 0.00 C ATOM 10 N ASN 10 5.938 9.593 -3.675 1.00 0.00 N ATOM 10 CA ASN 10 7.095 8.683 -3.690 1.00 0.00 C ATOM 10 C ASN 10 7.667 8.624 -2.270 1.00 0.00 C ATOM 10 O ASN 10 8.041 9.641 -1.671 1.00 0.00 O ATOM 10 CB ASN 10 8.165 9.301 -4.611 1.00 0.00 C ATOM 11 N THR 11 7.721 7.409 -1.761 1.00 0.00 N ATOM 11 CA THR 11 8.237 7.124 -0.411 1.00 0.00 C ATOM 11 C THR 11 9.743 6.865 -0.467 1.00 0.00 C ATOM 11 O THR 11 10.482 7.076 0.505 1.00 0.00 O ATOM 11 CB THR 11 7.542 5.845 0.089 1.00 0.00 C ATOM 12 N SER 12 10.169 6.405 -1.630 1.00 0.00 N ATOM 12 CA SER 12 11.580 6.089 -1.900 1.00 0.00 C ATOM 12 C SER 12 12.240 7.243 -2.659 1.00 0.00 C ATOM 12 O SER 12 11.639 7.883 -3.531 1.00 0.00 O ATOM 12 CB SER 12 11.648 4.844 -2.803 1.00 0.00 C ATOM 13 N HIS 13 13.487 7.482 -2.298 1.00 0.00 N ATOM 13 CA HIS 13 14.308 8.546 -2.899 1.00 0.00 C ATOM 13 C HIS 13 14.686 8.112 -4.318 1.00 0.00 C ATOM 13 O HIS 13 15.252 8.879 -5.109 1.00 0.00 O ATOM 13 CB HIS 13 15.601 8.673 -2.076 1.00 0.00 C ATOM 14 N MET 14 14.356 6.868 -4.609 1.00 0.00 N ATOM 14 CA MET 14 14.627 6.249 -5.916 1.00 0.00 C ATOM 14 C MET 14 13.416 6.447 -6.834 1.00 0.00 C ATOM 14 O MET 14 12.272 6.132 -6.486 1.00 0.00 O ATOM 14 CB MET 14 14.805 4.737 -5.690 1.00 0.00 C ATOM 15 N LYS 15 13.709 6.975 -8.008 1.00 0.00 N ATOM 15 CA LYS 15 12.698 7.250 -9.041 1.00 0.00 C ATOM 15 C LYS 15 12.474 5.974 -9.855 1.00 0.00 C ATOM 15 O LYS 15 11.399 5.738 -10.424 1.00 0.00 O ATOM 15 CB LYS 15 13.262 8.326 -9.984 1.00 0.00 C ATOM 16 N GLY 16 13.520 5.168 -9.889 1.00 0.00 N ATOM 16 CA GLY 16 13.523 3.888 -10.613 1.00 0.00 C ATOM 16 C GLY 16 12.226 3.130 -10.320 1.00 0.00 C ATOM 16 O GLY 16 11.886 2.134 -10.973 1.00 0.00 O ATOM 17 N MET 17 11.523 3.634 -9.323 1.00 0.00 N ATOM 17 CA MET 17 10.245 3.061 -8.874 1.00 0.00 C ATOM 17 C MET 17 10.534 1.682 -8.275 1.00 0.00 C ATOM 17 O MET 17 9.842 0.690 -8.545 1.00 0.00 O ATOM 17 CB MET 17 9.332 2.883 -10.103 1.00 0.00 C ATOM 18 N LYS 18 11.571 1.656 -7.459 1.00 0.00 N ATOM 18 CA LYS 18 12.024 0.435 -6.775 1.00 0.00 C ATOM 18 C LYS 18 11.129 0.218 -5.553 1.00 0.00 C ATOM 18 O LYS 18 11.166 -0.830 -4.889 1.00 0.00 O ATOM 18 CB LYS 18 13.468 0.652 -6.290 1.00 0.00 C ATOM 19 N GLY 19 10.332 1.235 -5.283 1.00 0.00 N ATOM 19 CA GLY 19 9.391 1.237 -4.154 1.00 0.00 C ATOM 19 C GLY 19 8.006 1.668 -4.647 1.00 0.00 C ATOM 19 O GLY 19 7.550 1.291 -5.735 1.00 0.00 O ATOM 20 N ALA 20 7.363 2.464 -3.814 1.00 0.00 N ATOM 20 CA ALA 20 6.019 2.997 -4.089 1.00 0.00 C ATOM 20 C ALA 20 6.167 4.385 -4.718 1.00 0.00 C ATOM 20 O ALA 20 6.478 5.380 -4.047 1.00 0.00 O ATOM 20 CB ALA 20 5.268 3.156 -2.754 1.00 0.00 C ATOM 21 N GLU 21 5.937 4.416 -6.017 1.00 0.00 N ATOM 21 CA GLU 21 6.025 5.646 -6.820 1.00 0.00 C ATOM 21 C GLU 21 4.718 5.700 -7.618 1.00 0.00 C ATOM 21 O GLU 21 4.476 4.902 -8.533 1.00 0.00 O ATOM 21 CB GLU 21 7.181 5.512 -7.828 1.00 0.00 C ATOM 22 N ALA 22 3.894 6.659 -7.241 1.00 0.00 N ATOM 22 CA ALA 22 2.585 6.890 -7.873 1.00 0.00 C ATOM 22 C ALA 22 2.451 8.263 -8.534 1.00 0.00 C ATOM 22 O ALA 22 2.824 9.302 -7.968 1.00 0.00 O ATOM 22 CB ALA 22 1.503 6.790 -6.782 1.00 0.00 C ATOM 23 N THR 23 1.913 8.228 -9.738 1.00 0.00 N ATOM 23 CA THR 23 1.693 9.433 -10.550 1.00 0.00 C ATOM 23 C THR 23 0.181 9.611 -10.721 1.00 0.00 C ATOM 23 O THR 23 -0.545 8.701 -11.148 1.00 0.00 O ATOM 23 CB THR 23 2.306 9.197 -11.946 1.00 0.00 C ATOM 24 N VAL 24 -0.262 10.806 -10.376 1.00 0.00 N ATOM 24 CA VAL 24 -1.680 11.191 -10.460 1.00 0.00 C ATOM 24 C VAL 24 -2.062 12.466 -11.223 1.00 0.00 C ATOM 24 O VAL 24 -1.473 13.541 -11.042 1.00 0.00 O ATOM 24 CB VAL 24 -2.120 11.374 -8.994 1.00 0.00 C ATOM 25 N THR 25 -3.060 12.308 -12.071 1.00 0.00 N ATOM 25 CA THR 25 -3.586 13.402 -12.906 1.00 0.00 C ATOM 25 C THR 25 -5.112 13.268 -12.885 1.00 0.00 C ATOM 25 O THR 25 -5.676 12.175 -13.023 1.00 0.00 O ATOM 25 CB THR 25 -3.103 13.202 -14.354 1.00 0.00 C ATOM 26 N GLY 26 -5.750 14.409 -12.708 1.00 0.00 N ATOM 26 CA GLY 26 -7.217 14.509 -12.655 1.00 0.00 C ATOM 26 C GLY 26 -7.740 15.796 -13.294 1.00 0.00 C ATOM 26 O GLY 26 -7.005 16.773 -13.499 1.00 0.00 O ATOM 27 N ALA 27 -9.025 15.763 -13.597 1.00 0.00 N ATOM 27 CA ALA 27 -9.731 16.892 -14.217 1.00 0.00 C ATOM 27 C ALA 27 -11.124 17.034 -13.590 1.00 0.00 C ATOM 27 O ALA 27 -11.795 16.050 -13.257 1.00 0.00 O ATOM 27 CB ALA 27 -9.899 16.595 -15.719 1.00 0.00 C ATOM 28 N TYR 28 -11.527 18.283 -13.445 1.00 0.00 N ATOM 28 CA TYR 28 -12.832 18.645 -12.865 1.00 0.00 C ATOM 28 C TYR 28 -13.936 17.823 -13.538 1.00 0.00 C ATOM 28 O TYR 28 -15.016 17.594 -12.979 1.00 0.00 O ATOM 28 CB TYR 28 -13.124 20.124 -13.161 1.00 0.00 C ATOM 29 N ASP 29 -13.628 17.394 -14.748 1.00 0.00 N ATOM 29 CA ASP 29 -14.543 16.588 -15.572 1.00 0.00 C ATOM 29 C ASP 29 -14.726 15.241 -14.869 1.00 0.00 C ATOM 29 O ASP 29 -15.477 14.364 -15.317 1.00 0.00 O ATOM 29 CB ASP 29 -13.870 16.339 -16.932 1.00 0.00 C ATOM 94 N THR 94 -3.312 12.872 3.222 1.00 0.00 N ATOM 94 CA THR 94 -1.857 13.093 3.226 1.00 0.00 C ATOM 94 C THR 94 -1.289 12.083 2.228 1.00 0.00 C ATOM 94 O THR 94 -0.202 12.261 1.660 1.00 0.00 O ATOM 94 CB THR 94 -1.324 12.762 4.630 1.00 0.00 C ATOM 95 N THR 95 -2.056 11.026 2.037 1.00 0.00 N ATOM 95 CA THR 95 -1.701 9.933 1.120 1.00 0.00 C ATOM 95 C THR 95 -2.840 9.875 0.097 1.00 0.00 C ATOM 95 O THR 95 -4.019 10.074 0.417 1.00 0.00 O ATOM 95 CB THR 95 -1.663 8.613 1.912 1.00 0.00 C ATOM 96 N VAL 96 -2.449 9.598 -1.132 1.00 0.00 N ATOM 96 CA VAL 96 -3.378 9.494 -2.269 1.00 0.00 C ATOM 96 C VAL 96 -3.674 8.008 -2.484 1.00 0.00 C ATOM 96 O VAL 96 -2.797 7.212 -2.849 1.00 0.00 O ATOM 96 CB VAL 96 -2.680 9.995 -3.543 1.00 0.00 C ATOM 97 N TYR 97 -4.926 7.668 -2.247 1.00 0.00 N ATOM 97 CA TYR 97 -5.425 6.293 -2.391 1.00 0.00 C ATOM 97 C TYR 97 -6.715 6.285 -3.215 1.00 0.00 C ATOM 97 O TYR 97 -7.681 7.006 -2.930 1.00 0.00 O ATOM 97 CB TYR 97 -5.783 5.772 -0.986 1.00 0.00 C ATOM 98 N MET 98 -6.696 5.450 -4.239 1.00 0.00 N ATOM 98 CA MET 98 -7.830 5.284 -5.161 1.00 0.00 C ATOM 98 C MET 98 -8.080 3.783 -5.312 1.00 0.00 C ATOM 98 O MET 98 -7.181 2.998 -5.650 1.00 0.00 O ATOM 98 CB MET 98 -7.467 5.877 -6.534 1.00 0.00 C ATOM 99 N VAL 99 -9.320 3.417 -5.049 1.00 0.00 N ATOM 99 CA VAL 99 -9.776 2.023 -5.131 1.00 0.00 C ATOM 99 C VAL 99 -11.182 1.889 -5.729 1.00 0.00 C ATOM 99 O VAL 99 -12.102 2.660 -5.424 1.00 0.00 O ATOM 99 CB VAL 99 -9.829 1.480 -3.690 1.00 0.00 C ATOM 100 N ASP 100 -11.312 0.892 -6.585 1.00 0.00 1 ATOM 100 CA ASP 100 -12.575 0.584 -7.275 1.00 0.00 1 ATOM 100 C ASP 100 -12.925 -0.855 -6.895 1.00 0.00 1 ATOM 100 O ASP 100 -12.314 -1.825 -7.364 1.00 0.00 1 ATOM 100 CB ASP 100 -12.337 0.662 -8.794 1.00 0.00 1 ATOM 101 N TYR 101 -13.920 -0.957 -6.033 1.00 0.00 1 ATOM 101 CA TYR 101 -14.418 -2.245 -5.532 1.00 0.00 1 ATOM 101 C TYR 101 -15.929 -2.066 -5.360 1.00 0.00 1 ATOM 101 O TYR 101 -16.416 -1.043 -4.859 1.00 0.00 1 ATOM 101 CB TYR 101 -13.778 -2.515 -4.157 1.00 0.00 1 ATOM 102 N THR 102 -16.645 -3.090 -5.790 1.00 0.00 1 ATOM 102 CA THR 102 -18.114 -3.126 -5.720 1.00 0.00 1 ATOM 102 C THR 102 -18.524 -4.162 -4.672 1.00 0.00 1 ATOM 102 O THR 102 -18.455 -5.380 -4.892 1.00 0.00 1 ATOM 102 CB THR 102 -18.671 -3.561 -7.086 1.00 0.00 1 ATOM 103 N SER 103 -18.950 -3.639 -3.538 1.00 0.00 1 ATOM 103 CA SER 103 -19.392 -4.453 -2.397 1.00 0.00 1 ATOM 103 C SER 103 -20.622 -3.754 -1.809 1.00 0.00 1 ATOM 103 O SER 103 -20.639 -2.535 -1.586 1.00 0.00 1 ATOM 103 CB SER 103 -18.271 -4.465 -1.342 1.00 0.00 1 ATOM 104 N THR 104 -21.638 -4.562 -1.570 1.00 0.00 1 ATOM 104 CA THR 104 -22.915 -4.100 -1.006 1.00 0.00 1 ATOM 104 C THR 104 -23.578 -3.183 -2.039 1.00 0.00 1 ATOM 104 O THR 104 -24.107 -2.110 -1.720 1.00 0.00 1 ATOM 104 CB THR 104 -22.619 -3.270 0.258 1.00 0.00 1 ATOM 105 N THR 105 -23.528 -3.638 -3.276 1.00 0.00 1 ATOM 105 CA THR 105 -24.102 -2.916 -4.424 1.00 0.00 1 ATOM 105 C THR 105 -25.624 -2.832 -4.264 1.00 0.00 1 ATOM 105 O THR 105 -26.300 -1.982 -4.859 1.00 0.00 1 ATOM 105 CB THR 105 -23.813 -3.737 -5.692 1.00 0.00 1 ATOM 106 N SER 106 -26.131 -3.735 -3.446 1.00 0.00 1 ATOM 106 CA SER 106 -27.568 -3.834 -3.148 1.00 0.00 1 ATOM 106 C SER 106 -27.978 -2.654 -2.264 1.00 0.00 1 ATOM 106 O SER 106 -29.166 -2.357 -2.073 1.00 0.00 1 ATOM 106 CB SER 106 -27.805 -5.132 -2.359 1.00 0.00 1 ATOM 107 N GLY 107 -26.961 -2.001 -1.734 1.00 0.00 1 ATOM 107 CA GLY 107 -27.128 -0.837 -0.852 1.00 0.00 1 ATOM 107 C GLY 107 -27.102 0.447 -1.687 1.00 0.00 1 ATOM 107 O GLY 107 -28.141 0.992 -2.084 1.00 0.00 1 ATOM 108 N GLU 108 -25.889 0.903 -1.936 1.00 0.00 1 ATOM 108 CA GLU 108 -25.634 2.121 -2.719 1.00 0.00 1 ATOM 108 C GLU 108 -25.149 1.697 -4.108 1.00 0.00 1 ATOM 108 O GLU 108 -24.283 0.824 -4.262 1.00 0.00 1 ATOM 108 CB GLU 108 -24.502 2.907 -2.034 1.00 0.00 1 ATOM 109 N LYS 109 -25.733 2.338 -5.102 1.00 0.00 1 ATOM 109 CA LYS 109 -25.416 2.086 -6.517 1.00 0.00 1 ATOM 109 C LYS 109 -24.815 3.370 -7.095 1.00 0.00 1 ATOM 109 O LYS 109 -25.490 4.394 -7.262 1.00 0.00 1 ATOM 109 CB LYS 109 -26.731 1.804 -7.267 1.00 0.00 1 ATOM 110 N VAL 110 -23.532 3.278 -7.392 1.00 0.00 1 ATOM 110 CA VAL 110 -22.757 4.392 -7.958 1.00 0.00 1 ATOM 110 C VAL 110 -21.968 3.900 -9.176 1.00 0.00 1 ATOM 110 O VAL 110 -21.040 3.086 -9.070 1.00 0.00 1 ATOM 110 CB VAL 110 -21.747 4.856 -6.892 1.00 0.00 1 ATOM 111 N LYS 111 -22.367 4.418 -10.322 1.00 0.00 1 ATOM 111 CA LYS 111 -21.747 4.083 -11.614 1.00 0.00 1 ATOM 111 C LYS 111 -21.218 5.411 -12.160 1.00 0.00 1 ATOM 111 O LYS 111 -21.976 6.293 -12.584 1.00 0.00 1 ATOM 111 CB LYS 111 -22.830 3.553 -12.568 1.00 0.00 1 ATOM 112 N ASN 112 -19.903 5.519 -12.134 1.00 0.00 1 ATOM 112 CA ASN 112 -19.185 6.711 -12.611 1.00 0.00 1 ATOM 112 C ASN 112 -19.938 7.908 -12.023 1.00 0.00 1 ATOM 112 O ASN 112 -19.775 9.060 -12.449 1.00 0.00 1 ATOM 112 CB ASN 112 -19.291 6.776 -14.146 1.00 0.00 1 ATOM 113 N HIS 113 -20.760 7.595 -11.039 1.00 0.00 1 ATOM 113 CA HIS 113 -21.580 8.592 -10.332 1.00 0.00 1 ATOM 113 C HIS 113 -21.536 8.207 -8.851 1.00 0.00 1 ATOM 113 O HIS 113 -22.231 7.292 -8.389 1.00 0.00 1 ATOM 113 CB HIS 113 -23.036 8.468 -10.820 1.00 0.00 1 ATOM 114 N LYS 114 -20.702 8.933 -8.132 1.00 0.00 1 ATOM 114 CA LYS 114 -20.502 8.733 -6.688 1.00 0.00 1 ATOM 114 C LYS 114 -20.583 10.063 -5.933 1.00 0.00 1 ATOM 114 O LYS 114 -20.017 11.085 -6.342 1.00 0.00 1 ATOM 114 CB LYS 114 -19.078 8.183 -6.491 1.00 0.00 1 ATOM 115 N TRP 115 -21.299 10.012 -4.825 1.00 0.00 1 ATOM 115 CA TRP 115 -21.506 11.176 -3.947 1.00 0.00 1 ATOM 115 C TRP 115 -20.120 11.651 -3.508 1.00 0.00 1 ATOM 115 O TRP 115 -19.838 12.855 -3.409 1.00 0.00 1 ATOM 115 CB TRP 115 -22.275 10.685 -2.703 1.00 0.00 1 ATOM 116 N VAL 116 -19.274 10.671 -3.250 1.00 0.00 1 ATOM 116 CA VAL 116 -17.890 10.902 -2.814 1.00 0.00 1 ATOM 116 C VAL 116 -17.172 11.735 -3.878 1.00 0.00 1 ATOM 116 O VAL 116 -16.380 12.640 -3.580 1.00 0.00 1 ATOM 116 CB VAL 116 -17.183 9.533 -2.738 1.00 0.00 1 ATOM 117 N THR 117 -17.475 11.397 -5.118 1.00 0.00 1 ATOM 117 CA THR 117 -16.899 12.066 -6.294 1.00 0.00 1 ATOM 117 C THR 117 -17.158 13.575 -6.255 1.00 0.00 1 ATOM 117 O THR 117 -16.293 14.398 -6.580 1.00 0.00 1 ATOM 117 CB THR 117 -17.610 11.524 -7.548 1.00 0.00 1 ATOM 118 N GLU 118 -18.370 13.903 -5.847 1.00 0.00 1 ATOM 118 CA GLU 118 -18.830 15.296 -5.735 1.00 0.00 1 ATOM 118 C GLU 118 -17.894 16.033 -4.775 1.00 0.00 1 ATOM 118 O GLU 118 -17.537 17.204 -4.974 1.00 0.00 1 ATOM 118 CB GLU 118 -20.243 15.299 -5.120 1.00 0.00 1 ATOM 119 N ASP 119 -17.515 15.311 -3.736 1.00 0.00 1 ATOM 119 CA ASP 119 -16.618 15.824 -2.691 1.00 0.00 1 ATOM 119 C ASP 119 -15.171 15.747 -3.188 1.00 0.00 1 ATOM 119 O ASP 119 -14.282 16.482 -2.736 1.00 0.00 1 ATOM 119 CB ASP 119 -16.755 14.900 -1.466 1.00 0.00 1 ATOM 120 N GLU 120 -14.970 14.839 -4.125 1.00 0.00 1 ATOM 120 CA GLU 120 -13.655 14.599 -4.742 1.00 0.00 1 ATOM 120 C GLU 120 -13.394 15.693 -5.781 1.00 0.00 1 ATOM 120 O GLU 120 -12.257 16.133 -5.998 1.00 0.00 1 ATOM 120 CB GLU 120 -13.717 13.244 -5.468 1.00 0.00 1 ATOM 121 N LEU 121 -14.478 16.108 -6.408 1.00 0.00 1 ATOM 121 CA LEU 121 -14.455 17.152 -7.444 1.00 0.00 1 ATOM 121 C LEU 121 -14.715 18.516 -6.801 1.00 0.00 1 ATOM 121 O LEU 121 -14.440 19.577 -7.378 1.00 0.00 1 ATOM 121 CB LEU 121 -15.579 16.871 -8.456 1.00 0.00 1 ATOM 122 N SER 122 -15.249 18.452 -5.596 1.00 0.00 1 ATOM 122 CA SER 122 -15.580 19.642 -4.798 1.00 0.00 1 ATOM 122 C SER 122 -14.301 20.421 -4.483 1.00 0.00 1 ATOM 122 O SER 122 -14.318 21.628 -4.202 1.00 0.00 1 ATOM 122 CB SER 122 -16.194 19.193 -3.461 1.00 0.00 1 ATOM 123 N ALA 123 -13.201 19.694 -4.539 1.00 0.00 1 ATOM 123 CA ALA 123 -11.862 20.242 -4.271 1.00 0.00 1 ATOM 123 C ALA 123 -11.638 21.368 -5.284 1.00 0.00 1 ATOM 123 O ALA 123 -10.667 22.135 -5.208 1.00 0.00 1 ATOM 123 CB ALA 123 -10.810 19.147 -4.515 1.00 0.00 1 ATOM 124 N LYS 124 -12.562 21.436 -6.224 1.00 0.00 1 ATOM 124 CA LYS 124 -12.540 22.442 -7.296 1.00 0.00 1 ATOM 124 CB LYS 124 -13.900 23.160 -7.346 1.00 0.00 1 TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 292 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 70.79 53.6 56 47.5 118 ARMSMC SECONDARY STRUCTURE . . 51.79 62.5 24 36.4 66 ARMSMC SURFACE . . . . . . . . 78.52 50.0 38 47.5 80 ARMSMC BURIED . . . . . . . . 50.73 61.1 18 47.4 38 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 51 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 44 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 29 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 36 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 30 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 25 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 17 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 8 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 18 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 11 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 7 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 3 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.78 (Number of atoms: 60) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.78 60 100.0 60 CRMSCA CRN = ALL/NP . . . . . 0.2130 CRMSCA SECONDARY STRUCTURE . . 10.45 33 100.0 33 CRMSCA SURFACE . . . . . . . . 13.20 41 100.0 41 CRMSCA BURIED . . . . . . . . 11.83 19 100.0 19 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.80 292 99.0 295 CRMSMC SECONDARY STRUCTURE . . 10.64 164 100.0 164 CRMSMC SURFACE . . . . . . . . 13.28 199 98.5 202 CRMSMC BURIED . . . . . . . . 11.69 93 100.0 93 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 13.07 55 8.2 671 CRMSSC RELIABLE SIDE CHAINS . 13.07 55 8.6 641 CRMSSC SECONDARY STRUCTURE . . 10.93 32 8.1 396 CRMSSC SURFACE . . . . . . . . 13.76 38 8.1 467 CRMSSC BURIED . . . . . . . . 11.38 17 8.3 204 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.80 292 32.1 911 CRMSALL SECONDARY STRUCTURE . . 10.64 164 31.1 528 CRMSALL SURFACE . . . . . . . . 13.28 199 31.5 631 CRMSALL BURIED . . . . . . . . 11.69 93 33.2 280 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.849 1.000 0.500 60 100.0 60 ERRCA SECONDARY STRUCTURE . . 10.078 1.000 0.500 33 100.0 33 ERRCA SURFACE . . . . . . . . 12.103 1.000 0.500 41 100.0 41 ERRCA BURIED . . . . . . . . 11.302 1.000 0.500 19 100.0 19 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.880 1.000 0.500 292 99.0 295 ERRMC SECONDARY STRUCTURE . . 10.237 1.000 0.500 164 100.0 164 ERRMC SURFACE . . . . . . . . 12.219 1.000 0.500 199 98.5 202 ERRMC BURIED . . . . . . . . 11.154 1.000 0.500 93 100.0 93 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.100 1.000 0.500 55 8.2 671 ERRSC RELIABLE SIDE CHAINS . 12.100 1.000 0.500 55 8.6 641 ERRSC SECONDARY STRUCTURE . . 10.494 1.000 0.500 32 8.1 396 ERRSC SURFACE . . . . . . . . 12.583 1.000 0.500 38 8.1 467 ERRSC BURIED . . . . . . . . 11.022 1.000 0.500 17 8.3 204 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.880 1.000 0.500 292 32.1 911 ERRALL SECONDARY STRUCTURE . . 10.237 1.000 0.500 164 31.1 528 ERRALL SURFACE . . . . . . . . 12.219 1.000 0.500 199 31.5 631 ERRALL BURIED . . . . . . . . 11.154 1.000 0.500 93 33.2 280 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 25 60 60 DISTCA CA (P) 0.00 0.00 0.00 1.67 41.67 60 DISTCA CA (RMS) 0.00 0.00 0.00 3.46 7.79 DISTCA ALL (N) 0 0 0 10 118 292 911 DISTALL ALL (P) 0.00 0.00 0.00 1.10 12.95 911 DISTALL ALL (RMS) 0.00 0.00 0.00 3.95 7.73 DISTALL END of the results output