####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 64 ( 256), selected 64 , name T0579TS328_1-D2 # Molecule2: number of CA atoms 64 ( 966), selected 64 , name T0579-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0579TS328_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 39 - 55 4.98 16.35 LONGEST_CONTINUOUS_SEGMENT: 17 40 - 56 4.93 16.26 LCS_AVERAGE: 23.44 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 66 - 74 1.88 15.52 LONGEST_CONTINUOUS_SEGMENT: 9 67 - 75 1.79 16.04 LONGEST_CONTINUOUS_SEGMENT: 9 84 - 92 1.73 18.29 LCS_AVERAGE: 10.72 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 32 - 37 0.68 14.02 LONGEST_CONTINUOUS_SEGMENT: 6 33 - 38 0.94 13.74 LONGEST_CONTINUOUS_SEGMENT: 6 84 - 89 0.97 15.18 LCS_AVERAGE: 6.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 64 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 30 T 30 4 4 14 3 4 4 6 10 12 13 14 14 16 16 20 22 23 24 27 29 33 35 37 LCS_GDT T 31 T 31 4 6 14 3 4 4 4 5 9 11 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT A 32 A 32 6 7 14 3 6 6 7 10 12 13 14 14 16 16 20 22 23 24 25 29 33 35 37 LCS_GDT Y 33 Y 33 6 7 14 3 6 6 7 10 12 13 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT V 34 V 34 6 7 14 3 6 6 7 10 12 13 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT V 35 V 35 6 7 14 3 6 6 7 10 12 13 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT S 36 S 36 6 7 14 3 6 6 7 10 10 13 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT Y 37 Y 37 6 7 14 3 6 6 7 10 12 13 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT T 38 T 38 6 7 14 3 3 6 7 10 12 13 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT P 39 P 39 3 7 17 3 3 4 6 8 12 13 14 14 16 16 16 18 22 22 26 30 33 35 37 LCS_GDT T 40 T 40 3 7 17 3 3 4 6 8 8 11 12 13 14 15 16 19 22 22 24 25 26 28 32 LCS_GDT N 41 N 41 3 6 17 3 3 3 4 8 12 13 14 14 16 16 16 19 22 22 26 30 33 35 37 LCS_GDT G 42 G 42 4 6 17 3 4 5 6 10 12 13 14 14 16 16 20 20 22 23 26 30 33 35 37 LCS_GDT G 43 G 43 4 6 17 3 4 5 5 6 6 7 9 12 13 15 20 22 23 24 27 30 33 35 37 LCS_GDT Q 44 Q 44 4 6 17 3 4 5 5 6 6 9 9 10 12 13 15 17 21 24 25 27 29 31 31 LCS_GDT R 45 R 45 4 7 17 3 6 6 6 7 8 10 10 11 12 15 16 16 17 19 20 21 22 23 27 LCS_GDT V 46 V 46 4 7 17 3 4 5 5 6 6 7 8 12 14 15 16 16 17 19 20 21 22 23 24 LCS_GDT D 47 D 47 5 7 17 3 6 6 6 7 8 10 10 12 14 15 16 16 17 19 20 21 22 23 27 LCS_GDT H 48 H 48 5 7 17 3 6 6 6 7 8 10 10 12 14 15 16 16 17 19 20 21 22 23 27 LCS_GDT H 49 H 49 5 7 17 3 6 6 6 7 8 10 10 12 14 15 16 16 17 19 21 22 25 28 28 LCS_GDT K 50 K 50 5 7 17 3 6 6 6 7 8 10 10 12 14 15 16 16 17 20 21 25 26 28 30 LCS_GDT W 51 W 51 5 7 17 3 6 6 6 7 8 10 10 12 14 15 16 16 17 20 22 25 26 28 31 LCS_GDT V 52 V 52 5 6 17 3 4 5 5 7 8 10 10 12 14 15 16 16 17 20 22 25 28 30 32 LCS_GDT I 53 I 53 5 6 17 3 4 5 5 7 8 10 10 12 14 15 16 16 19 20 25 25 28 30 32 LCS_GDT Q 54 Q 54 5 6 17 3 4 5 5 7 8 8 9 10 12 15 16 16 19 23 25 25 28 30 32 LCS_GDT E 55 E 55 3 6 17 3 4 5 6 7 9 9 10 12 13 15 17 19 22 23 25 25 28 30 32 LCS_GDT E 56 E 56 4 5 17 3 4 4 4 6 7 10 11 12 13 15 18 20 22 23 25 25 28 30 32 LCS_GDT I 57 I 57 4 5 15 3 4 6 7 8 9 9 11 12 13 15 18 20 22 23 24 25 26 30 32 LCS_GDT K 58 K 58 4 5 15 3 4 4 5 5 6 8 9 11 13 15 18 20 22 22 24 25 26 28 32 LCS_GDT D 59 D 59 4 5 15 3 4 4 5 7 7 7 10 10 11 14 15 18 19 21 21 22 24 27 29 LCS_GDT A 60 A 60 3 5 15 3 3 4 5 7 7 9 10 10 12 15 16 19 22 22 24 25 26 28 32 LCS_GDT G 61 G 61 3 5 15 3 3 4 5 7 8 9 11 11 13 15 18 20 22 22 24 25 27 30 32 LCS_GDT D 62 D 62 3 5 15 3 3 4 7 7 9 9 11 12 13 15 18 20 22 23 24 25 28 30 32 LCS_GDT K 63 K 63 4 5 15 3 4 4 5 7 9 10 11 12 13 15 18 20 22 24 25 27 28 30 32 LCS_GDT T 64 T 64 4 5 15 3 4 5 6 7 9 10 11 12 13 15 20 22 23 24 25 27 31 35 37 LCS_GDT L 65 L 65 4 5 15 4 4 4 4 5 6 9 10 11 13 14 17 19 22 23 25 27 31 35 37 LCS_GDT Q 66 Q 66 4 9 15 4 4 4 4 6 9 11 11 12 13 15 18 20 23 24 27 30 33 35 37 LCS_GDT P 67 P 67 4 9 15 4 4 5 7 9 10 11 11 13 13 15 18 20 22 24 27 30 33 35 37 LCS_GDT G 68 G 68 4 9 15 4 4 5 7 9 10 11 11 13 13 15 18 20 22 24 27 30 33 35 37 LCS_GDT D 69 D 69 4 9 15 3 4 6 7 9 10 11 11 13 13 15 18 20 22 24 27 30 33 35 37 LCS_GDT Q 70 Q 70 4 9 15 3 4 6 7 9 10 11 11 13 13 15 18 20 22 24 27 29 33 35 37 LCS_GDT V 71 V 71 5 9 15 3 4 5 7 9 10 11 11 14 16 16 18 22 23 24 27 30 33 35 37 LCS_GDT I 72 I 72 5 9 15 3 4 6 7 9 10 11 11 14 16 16 18 22 23 24 27 30 33 35 37 LCS_GDT L 73 L 73 5 9 15 3 4 6 7 10 12 13 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT E 74 E 74 5 9 15 3 4 6 7 9 12 13 14 14 16 16 20 22 23 24 27 30 33 35 37 LCS_GDT A 75 A 75 5 9 15 3 4 5 6 9 10 11 11 13 14 15 20 22 23 24 27 30 33 35 37 LCS_GDT S 76 S 76 4 6 15 3 4 4 5 6 8 9 11 13 14 15 20 22 23 24 27 30 33 35 37 LCS_GDT H 77 H 77 4 6 15 3 4 4 5 6 7 9 10 11 14 15 18 22 23 24 27 30 33 35 37 LCS_GDT M 78 M 78 3 6 15 3 3 4 5 5 7 9 10 11 14 15 20 22 23 24 27 30 33 35 37 LCS_GDT K 79 K 79 3 6 14 3 3 3 4 5 7 9 10 12 14 15 20 22 23 24 27 30 33 35 37 LCS_GDT G 80 G 80 3 6 14 3 3 3 4 5 7 9 10 12 14 15 20 22 23 24 27 30 33 35 37 LCS_GDT M 81 M 81 3 3 14 3 3 3 4 6 7 8 9 10 12 15 16 19 22 24 27 28 33 35 37 LCS_GDT K 82 K 82 3 3 13 3 3 3 3 3 3 5 9 10 10 12 15 17 19 24 27 30 33 35 37 LCS_GDT G 83 G 83 3 6 13 3 3 3 3 4 6 8 11 11 11 14 20 22 23 24 27 30 33 35 37 LCS_GDT A 84 A 84 6 9 13 3 5 6 7 8 9 10 11 12 13 15 18 20 23 24 27 30 33 35 37 LCS_GDT T 85 T 85 6 9 13 3 5 6 7 8 9 10 11 11 12 15 18 20 22 24 27 30 33 35 37 LCS_GDT A 86 A 86 6 9 13 3 5 6 7 8 9 10 11 12 13 15 18 20 22 24 27 30 33 35 37 LCS_GDT E 87 E 87 6 9 13 3 5 6 7 8 9 10 11 11 12 15 17 20 22 23 25 28 31 35 37 LCS_GDT I 88 I 88 6 9 13 3 5 6 7 8 9 10 11 12 13 15 18 20 22 23 25 27 29 33 33 LCS_GDT D 89 D 89 6 9 13 3 4 6 7 8 9 10 11 11 12 14 17 19 22 23 25 26 28 30 33 LCS_GDT S 90 S 90 4 9 13 3 4 5 6 8 9 10 11 12 13 15 17 20 22 23 25 25 28 30 32 LCS_GDT A 91 A 91 4 9 13 3 4 5 7 8 9 10 11 12 13 15 18 20 22 23 25 25 28 30 32 LCS_GDT E 92 E 92 3 9 13 3 3 5 6 8 9 10 11 12 13 15 18 20 22 22 24 25 26 28 30 LCS_GDT K 93 K 93 3 6 13 0 3 3 4 4 8 10 11 11 11 11 13 18 22 22 24 25 26 28 28 LCS_AVERAGE LCS_A: 13.66 ( 6.84 10.72 23.44 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 7 10 12 13 14 14 16 16 20 22 23 24 27 30 33 35 37 GDT PERCENT_AT 6.25 9.38 9.38 10.94 15.62 18.75 20.31 21.88 21.88 25.00 25.00 31.25 34.38 35.94 37.50 42.19 46.88 51.56 54.69 57.81 GDT RMS_LOCAL 0.27 0.64 0.64 1.09 1.73 2.25 2.37 2.50 2.50 3.06 3.06 8.35 4.76 4.93 5.23 5.79 6.41 6.62 6.72 6.95 GDT RMS_ALL_AT 21.56 20.22 20.22 13.59 13.93 14.34 14.34 14.36 14.36 14.44 14.44 13.27 13.33 13.27 13.47 14.59 14.51 14.43 13.93 13.92 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 30 T 30 1.496 3 0.082 0.082 2.804 67.143 38.367 LGA T 31 T 31 3.501 3 0.016 0.016 3.580 52.381 29.932 LGA A 32 A 32 2.403 1 0.591 0.591 2.403 72.976 58.381 LGA Y 33 Y 33 1.148 8 0.049 0.049 3.202 69.286 23.095 LGA V 34 V 34 2.953 3 0.043 0.043 2.953 65.119 37.211 LGA V 35 V 35 0.718 3 0.140 0.140 3.560 69.881 39.932 LGA S 36 S 36 3.317 2 0.027 0.027 3.317 63.214 42.143 LGA Y 37 Y 37 1.711 8 0.624 0.624 3.523 61.429 20.476 LGA T 38 T 38 1.801 3 0.049 0.049 3.242 65.119 37.211 LGA P 39 P 39 3.003 3 0.198 0.198 3.952 52.381 29.932 LGA T 40 T 40 6.548 3 0.567 0.567 6.674 19.762 11.293 LGA N 41 N 41 3.513 4 0.441 0.441 3.538 56.310 28.155 LGA G 42 G 42 2.269 0 0.455 0.455 5.566 52.024 52.024 LGA G 43 G 43 9.257 0 0.124 0.124 11.606 3.690 3.690 LGA Q 44 Q 44 15.355 5 0.046 0.046 17.541 0.000 0.000 LGA R 45 R 45 20.578 7 0.120 0.120 23.531 0.000 0.000 LGA V 46 V 46 25.442 3 0.427 0.427 26.326 0.000 0.000 LGA D 47 D 47 25.681 4 0.098 0.098 26.158 0.000 0.000 LGA H 48 H 48 26.132 6 0.483 0.483 26.362 0.000 0.000 LGA H 49 H 49 21.869 6 0.086 0.086 23.012 0.000 0.000 LGA K 50 K 50 22.928 5 0.071 0.071 22.928 0.000 0.000 LGA W 51 W 51 20.559 10 0.202 0.202 22.066 0.000 0.000 LGA V 52 V 52 18.622 3 0.069 0.069 19.056 0.000 0.000 LGA I 53 I 53 17.772 4 0.226 0.226 18.229 0.000 0.000 LGA Q 54 Q 54 18.948 5 0.497 0.497 18.948 0.000 0.000 LGA E 55 E 55 18.825 5 0.618 0.618 19.968 0.000 0.000 LGA E 56 E 56 18.819 5 0.580 0.580 18.819 0.000 0.000 LGA I 57 I 57 17.359 4 0.056 0.056 20.690 0.000 0.000 LGA K 58 K 58 22.283 5 0.543 0.543 22.307 0.000 0.000 LGA D 59 D 59 22.715 4 0.230 0.230 22.715 0.000 0.000 LGA A 60 A 60 20.363 1 0.355 0.355 21.299 0.000 0.000 LGA G 61 G 61 19.305 0 0.069 0.069 19.877 0.000 0.000 LGA D 62 D 62 19.650 4 0.289 0.289 19.749 0.000 0.000 LGA K 63 K 63 15.553 5 0.630 0.630 17.021 0.000 0.000 LGA T 64 T 64 8.679 3 0.117 0.117 11.307 1.071 0.612 LGA L 65 L 65 11.467 4 0.605 0.605 11.467 0.119 0.060 LGA Q 66 Q 66 10.765 5 0.054 0.054 10.765 0.000 0.000 LGA P 67 P 67 11.915 3 0.093 0.093 13.938 0.000 0.000 LGA G 68 G 68 12.971 0 0.663 0.663 14.385 0.000 0.000 LGA D 69 D 69 12.989 4 0.661 0.661 13.469 0.000 0.000 LGA Q 70 Q 70 12.102 5 0.121 0.121 12.380 0.238 0.106 LGA V 71 V 71 6.507 3 0.070 0.070 8.672 8.571 4.898 LGA I 72 I 72 6.044 4 0.079 0.079 6.086 31.905 15.952 LGA L 73 L 73 2.542 4 0.038 0.038 3.674 57.619 28.810 LGA E 74 E 74 2.508 5 0.646 0.646 5.505 48.690 21.640 LGA A 75 A 75 5.724 1 0.197 0.197 5.724 29.286 23.429 LGA S 76 S 76 6.125 2 0.095 0.095 10.120 10.357 6.905 LGA H 77 H 77 12.742 6 0.704 0.704 13.286 0.000 0.000 LGA M 78 M 78 13.401 4 0.394 0.394 13.401 0.000 0.000 LGA K 79 K 79 13.509 5 0.658 0.658 15.766 0.000 0.000 LGA G 80 G 80 12.159 0 0.562 0.562 13.161 0.000 0.000 LGA M 81 M 81 14.294 4 0.591 0.591 14.646 0.000 0.000 LGA K 82 K 82 14.283 5 0.090 0.090 14.283 0.000 0.000 LGA G 83 G 83 11.223 0 0.672 0.672 12.286 0.119 0.119 LGA A 84 A 84 12.087 1 0.066 0.066 12.552 0.000 0.000 LGA T 85 T 85 11.619 3 0.061 0.061 11.689 0.000 0.000 LGA A 86 A 86 11.569 1 0.141 0.141 11.569 0.000 0.000 LGA E 87 E 87 11.575 5 0.068 0.068 11.692 0.000 0.000 LGA I 88 I 88 11.321 4 0.069 0.069 12.890 0.000 0.000 LGA D 89 D 89 14.424 4 0.610 0.610 14.875 0.000 0.000 LGA S 90 S 90 17.195 2 0.258 0.258 17.295 0.000 0.000 LGA A 91 A 91 14.737 1 0.066 0.066 17.023 0.000 0.000 LGA E 92 E 92 18.803 5 0.070 0.070 18.803 0.000 0.000 LGA K 93 K 93 19.883 5 0.459 0.459 22.861 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 64 256 256 100.00 489 256 52.35 64 SUMMARY(RMSD_GDC): 11.993 11.972 11.972 14.980 8.662 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 64 64 4.0 14 2.50 21.094 18.483 0.539 LGA_LOCAL RMSD: 2.497 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.362 Number of assigned atoms: 64 Std_ASGN_ATOMS RMSD: 11.993 Standard rmsd on all 64 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.939672 * X + -0.141246 * Y + -0.311555 * Z + 66.646461 Y_new = -0.099183 * X + 0.984147 * Y + -0.147027 * Z + -36.501232 Z_new = 0.327383 * X + -0.107256 * Y + -0.938785 * Z + 156.058334 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.036431 -0.333532 -3.027836 [DEG: -173.9747 -19.1100 -173.4822 ] ZXZ: -1.129869 2.789882 1.887393 [DEG: -64.7368 159.8484 108.1396 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0579TS328_1-D2 REMARK 2: T0579-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0579TS328_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 64 64 4.0 14 2.50 18.483 11.99 REMARK ---------------------------------------------------------- MOLECULE T0579TS328_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0579 REMARK MODEL 1 REMARK PARENT 2gsy_E ATOM 117 N THR 30 -10.032 3.517 4.914 1.00 3.00 N ATOM 118 CA THR 30 -8.620 3.699 4.597 1.00 3.00 C ATOM 119 C THR 30 -7.744 2.710 5.360 1.00 3.00 C ATOM 120 O THR 30 -8.049 2.352 6.495 1.00 3.00 O ATOM 121 N THR 31 -6.664 2.256 4.731 1.00 3.00 N ATOM 122 CA THR 31 -5.726 1.373 5.408 1.00 3.00 C ATOM 123 C THR 31 -4.908 2.166 6.414 1.00 3.00 C ATOM 124 O THR 31 -4.208 3.110 6.063 1.00 3.00 O ATOM 125 N ALA 32 -5.014 1.784 7.675 1.00 3.00 N ATOM 126 CA ALA 32 -4.266 2.453 8.722 1.00 3.00 C ATOM 127 C ALA 32 -2.937 1.755 8.913 1.00 3.00 C ATOM 128 O ALA 32 -1.895 2.400 9.013 1.00 3.00 O ATOM 129 N TYR 33 -2.989 0.428 8.970 1.00 3.00 N ATOM 130 CA TYR 33 -1.812 -0.398 9.183 1.00 3.00 C ATOM 131 C TYR 33 -1.847 -1.599 8.261 1.00 3.00 C ATOM 132 O TYR 33 -2.882 -2.249 8.098 1.00 3.00 O ATOM 133 N VAL 34 -0.703 -1.884 7.658 1.00 3.00 N ATOM 134 CA VAL 34 -0.549 -3.043 6.804 1.00 3.00 C ATOM 135 C VAL 34 0.676 -3.836 7.254 1.00 3.00 C ATOM 136 O VAL 34 1.776 -3.288 7.349 1.00 3.00 O ATOM 137 N VAL 35 0.474 -5.117 7.560 1.00 3.00 N ATOM 138 CA VAL 35 1.559 -5.981 8.023 1.00 3.00 C ATOM 139 C VAL 35 1.614 -7.314 7.299 1.00 3.00 C ATOM 140 O VAL 35 0.695 -8.126 7.391 1.00 3.00 O ATOM 141 N SER 36 2.709 -7.540 6.585 1.00 3.00 N ATOM 142 CA SER 36 2.957 -8.835 5.970 1.00 3.00 C ATOM 143 C SER 36 3.138 -9.875 7.075 1.00 3.00 C ATOM 144 O SER 36 3.989 -9.729 7.951 1.00 3.00 O ATOM 145 N TYR 37 2.301 -10.905 7.041 1.00 3.00 N ATOM 146 CA TYR 37 2.292 -11.945 8.067 1.00 3.00 C ATOM 147 C TYR 37 3.150 -13.128 7.624 1.00 3.00 C ATOM 148 O TYR 37 3.776 -13.807 8.443 1.00 3.00 O ATOM 149 N THR 38 3.160 -13.366 6.320 1.00 3.00 N ATOM 150 CA THR 38 4.048 -14.330 5.711 1.00 3.00 C ATOM 151 C THR 38 4.175 -13.950 4.250 1.00 3.00 C ATOM 152 O THR 38 3.180 -13.886 3.538 1.00 3.00 O ATOM 153 N PRO 39 5.393 -13.655 3.817 1.00 3.00 N ATOM 154 CA PRO 39 5.656 -13.415 2.403 1.00 3.00 C ATOM 155 C PRO 39 6.511 -14.561 1.898 1.00 3.00 C ATOM 156 O PRO 39 7.275 -15.137 2.669 1.00 3.00 O ATOM 157 N THR 40 6.372 -14.894 0.617 1.00 3.00 N ATOM 158 CA THR 40 7.116 -16.000 0.003 1.00 3.00 C ATOM 159 C THR 40 7.318 -17.177 0.970 1.00 3.00 C ATOM 160 O THR 40 8.242 -17.184 1.791 1.00 3.00 O ATOM 161 N ASN 41 6.438 -18.165 0.865 1.00 3.00 N ATOM 162 CA ASN 41 6.315 -19.222 1.860 1.00 3.00 C ATOM 163 C ASN 41 5.868 -20.505 1.170 1.00 3.00 C ATOM 164 O ASN 41 4.678 -20.693 0.906 1.00 3.00 O ATOM 165 N GLY 42 6.830 -21.373 0.870 1.00 3.00 N ATOM 166 CA GLY 42 6.565 -22.610 0.146 1.00 3.00 C ATOM 167 C GLY 42 5.701 -23.587 0.913 1.00 3.00 C ATOM 168 O GLY 42 5.858 -23.748 2.124 1.00 3.00 O ATOM 169 N GLY 43 4.777 -24.231 0.205 1.00 3.00 N ATOM 170 CA GLY 43 3.924 -25.251 0.796 1.00 3.00 C ATOM 171 C GLY 43 4.402 -26.634 0.393 1.00 3.00 C ATOM 172 O GLY 43 4.630 -26.898 -0.787 1.00 3.00 O ATOM 173 N GLN 44 4.557 -27.507 1.383 1.00 3.00 N ATOM 174 CA GLN 44 4.911 -28.900 1.144 1.00 3.00 C ATOM 175 C GLN 44 3.648 -29.748 1.016 1.00 3.00 C ATOM 176 O GLN 44 2.646 -29.510 1.691 1.00 3.00 O ATOM 177 N ARG 45 3.720 -30.729 0.128 1.00 3.00 N ATOM 178 CA ARG 45 2.644 -31.664 -0.136 1.00 3.00 C ATOM 179 C ARG 45 2.465 -32.641 1.037 1.00 3.00 C ATOM 180 O ARG 45 3.446 -33.077 1.640 1.00 3.00 O ATOM 181 N VAL 46 1.211 -32.952 1.367 1.00 3.00 N ATOM 182 CA VAL 46 0.881 -33.966 2.374 1.00 3.00 C ATOM 183 C VAL 46 1.306 -33.690 3.807 1.00 3.00 C ATOM 184 O VAL 46 1.471 -34.620 4.598 1.00 3.00 O ATOM 185 N ASP 47 1.479 -32.415 4.144 1.00 3.00 N ATOM 186 CA ASP 47 1.853 -32.005 5.498 1.00 3.00 C ATOM 187 C ASP 47 1.095 -30.744 5.871 1.00 3.00 C ATOM 188 O ASP 47 0.656 -29.996 4.994 1.00 3.00 O ATOM 189 N HIS 48 0.940 -30.521 7.174 1.00 3.00 N ATOM 190 CA HIS 48 0.508 -29.229 7.683 1.00 3.00 C ATOM 191 C HIS 48 1.589 -28.198 7.372 1.00 3.00 C ATOM 192 O HIS 48 2.776 -28.448 7.591 1.00 3.00 O ATOM 193 N HIS 49 1.170 -27.061 6.822 1.00 3.00 N ATOM 194 CA HIS 49 2.045 -25.915 6.612 1.00 3.00 C ATOM 195 C HIS 49 1.577 -24.780 7.498 1.00 3.00 C ATOM 196 O HIS 49 0.492 -24.228 7.298 1.00 3.00 O ATOM 197 N LYS 50 2.389 -24.443 8.490 1.00 3.00 N ATOM 198 CA LYS 50 1.964 -23.508 9.525 1.00 3.00 C ATOM 199 C LYS 50 2.203 -22.069 9.120 1.00 3.00 C ATOM 200 O LYS 50 3.233 -21.737 8.536 1.00 3.00 O ATOM 201 N TRP 51 1.237 -21.218 9.435 1.00 3.00 N ATOM 202 CA TRP 51 1.378 -19.788 9.245 1.00 3.00 C ATOM 203 C TRP 51 1.003 -19.095 10.544 1.00 3.00 C ATOM 204 O TRP 51 -0.167 -18.789 10.775 1.00 3.00 O ATOM 205 N VAL 52 1.999 -18.852 11.408 1.00 3.00 N ATOM 206 CA VAL 52 1.727 -18.268 12.710 1.00 3.00 C ATOM 207 C VAL 52 1.448 -16.776 12.598 1.00 3.00 C ATOM 208 O VAL 52 1.868 -16.131 11.638 1.00 3.00 O ATOM 209 N ILE 53 0.736 -16.246 13.582 1.00 3.00 N ATOM 210 CA ILE 53 0.488 -14.822 13.673 1.00 3.00 C ATOM 211 C ILE 53 1.120 -14.302 14.954 1.00 3.00 C ATOM 212 O ILE 53 0.748 -14.708 16.056 1.00 3.00 O ATOM 213 N GLN 54 2.104 -13.427 14.798 1.00 3.00 N ATOM 214 CA GLN 54 2.821 -12.861 15.932 1.00 3.00 C ATOM 215 C GLN 54 2.894 -11.344 15.822 1.00 3.00 C ATOM 216 O GLN 54 3.982 -10.769 15.871 1.00 3.00 O ATOM 217 N GLU 55 1.745 -10.697 15.670 1.00 3.00 N ATOM 218 CA GLU 55 1.723 -9.265 15.414 1.00 3.00 C ATOM 219 C GLU 55 1.533 -8.463 16.680 1.00 3.00 C ATOM 220 O GLU 55 0.653 -8.753 17.487 1.00 3.00 O ATOM 221 N GLU 56 2.365 -7.445 16.841 1.00 3.00 N ATOM 222 CA GLU 56 2.156 -6.432 17.867 1.00 3.00 C ATOM 223 C GLU 56 2.013 -4.898 17.752 1.00 3.00 C ATOM 224 O GLU 56 2.552 -4.253 16.839 1.00 3.00 O ATOM 225 N ILE 57 1.408 -4.318 18.785 1.00 3.00 N ATOM 226 CA ILE 57 1.130 -2.888 18.844 1.00 3.00 C ATOM 227 C ILE 57 2.134 -1.976 19.548 1.00 3.00 C ATOM 228 O ILE 57 2.724 -2.346 20.563 1.00 3.00 O ATOM 229 N LYS 58 2.214 -0.729 19.056 1.00 3.00 N ATOM 230 CA LYS 58 3.091 0.317 19.571 1.00 3.00 C ATOM 231 C LYS 58 2.823 0.550 21.032 1.00 3.00 C ATOM 232 O LYS 58 1.773 0.143 21.561 1.00 3.00 O ATOM 233 N ASP 59 3.734 1.319 21.646 1.00 9.00 N ATOM 234 CA ASP 59 3.545 1.586 23.046 1.00 9.00 C ATOM 235 C ASP 59 2.302 2.430 23.250 1.00 9.00 C ATOM 236 O ASP 59 1.495 2.148 24.142 1.00 9.00 O ATOM 237 N ALA 60 2.076 3.390 22.367 1.00 9.00 N ATOM 238 CA ALA 60 0.893 4.201 22.545 1.00 9.00 C ATOM 239 C ALA 60 -0.071 4.135 21.376 1.00 9.00 C ATOM 240 O ALA 60 -0.968 4.965 21.256 1.00 9.00 O ATOM 241 N GLY 61 0.091 3.106 20.541 1.00 3.00 N ATOM 242 CA GLY 61 -0.730 2.950 19.353 1.00 3.00 C ATOM 243 C GLY 61 -0.480 4.104 18.390 1.00 3.00 C ATOM 244 O GLY 61 -1.365 4.482 17.647 1.00 3.00 O ATOM 245 N ASP 62 0.744 4.632 18.401 1.00 3.00 N ATOM 246 CA ASP 62 1.140 5.720 17.507 1.00 3.00 C ATOM 247 C ASP 62 0.868 5.304 16.074 1.00 3.00 C ATOM 248 O ASP 62 0.448 6.122 15.259 1.00 3.00 O ATOM 249 N LYS 63 1.314 4.096 15.749 1.00 3.00 N ATOM 250 CA LYS 63 1.103 3.410 14.477 1.00 3.00 C ATOM 251 C LYS 63 -0.367 3.608 14.101 1.00 3.00 C ATOM 252 O LYS 63 -0.718 3.675 12.923 1.00 3.00 O ATOM 253 N THR 64 -1.219 3.703 15.114 1.00 3.00 N ATOM 254 CA THR 64 -2.650 3.842 14.894 1.00 3.00 C ATOM 255 C THR 64 -3.023 5.313 14.722 1.00 3.00 C ATOM 256 O THR 64 -3.324 6.012 15.693 1.00 3.00 O ATOM 257 N LEU 65 -3.000 5.770 13.473 1.00 3.00 N ATOM 258 CA LEU 65 -3.179 7.188 13.158 1.00 3.00 C ATOM 259 C LEU 65 -4.638 7.646 13.218 1.00 3.00 C ATOM 260 O LEU 65 -4.912 8.846 13.262 1.00 3.00 O ATOM 261 N GLN 66 -5.561 6.684 13.207 1.00 3.00 N ATOM 262 CA GLN 66 -6.997 6.934 13.384 1.00 3.00 C ATOM 263 C GLN 66 -7.661 5.655 13.893 1.00 3.00 C ATOM 264 O GLN 66 -7.125 4.569 13.689 1.00 3.00 O ATOM 265 N PRO 67 -8.835 5.771 14.547 1.00 3.00 N ATOM 266 CA PRO 67 -9.501 4.568 15.071 1.00 3.00 C ATOM 267 C PRO 67 -9.605 3.435 14.052 1.00 3.00 C ATOM 268 O PRO 67 -9.996 3.665 12.902 1.00 3.00 O ATOM 269 N GLY 68 -9.235 2.232 14.488 1.00 3.00 N ATOM 270 CA GLY 68 -9.365 1.013 13.694 1.00 3.00 C ATOM 271 C GLY 68 -10.785 0.501 13.780 1.00 3.00 C ATOM 272 O GLY 68 -11.359 0.405 14.868 1.00 3.00 O ATOM 273 N ASP 69 -11.328 0.133 12.626 1.00 3.00 N ATOM 274 CA ASP 69 -12.730 -0.236 12.504 1.00 3.00 C ATOM 275 C ASP 69 -12.943 -1.665 12.000 1.00 3.00 C ATOM 276 O ASP 69 -13.980 -2.273 12.272 1.00 3.00 O ATOM 277 N GLN 70 -11.956 -2.202 11.291 1.00 3.00 N ATOM 278 CA GLN 70 -12.010 -3.591 10.851 1.00 3.00 C ATOM 279 C GLN 70 -10.622 -4.160 10.614 1.00 3.00 C ATOM 280 O GLN 70 -9.642 -3.426 10.513 1.00 3.00 O ATOM 281 N VAL 71 -10.550 -5.479 10.538 1.00 3.00 N ATOM 282 CA VAL 71 -9.316 -6.177 10.227 1.00 3.00 C ATOM 283 C VAL 71 -9.608 -7.114 9.069 1.00 3.00 C ATOM 284 O VAL 71 -10.671 -7.747 9.031 1.00 3.00 O ATOM 285 N ILE 72 -8.693 -7.185 8.111 1.00 3.00 N ATOM 286 CA ILE 72 -8.819 -8.181 7.060 1.00 3.00 C ATOM 287 C ILE 72 -7.497 -8.851 6.738 1.00 3.00 C ATOM 288 O ILE 72 -6.424 -8.293 6.968 1.00 3.00 O ATOM 289 N LEU 73 -7.596 -10.067 6.222 1.00 3.00 N ATOM 290 CA LEU 73 -6.438 -10.846 5.847 1.00 3.00 C ATOM 291 C LEU 73 -6.523 -11.221 4.382 1.00 3.00 C ATOM 292 O LEU 73 -7.485 -11.846 3.948 1.00 3.00 O ATOM 293 N GLU 74 -5.510 -10.824 3.625 1.00 3.00 N ATOM 294 CA GLU 74 -5.397 -11.216 2.232 1.00 3.00 C ATOM 295 C GLU 74 -4.343 -12.293 2.095 1.00 3.00 C ATOM 296 O GLU 74 -3.359 -12.300 2.834 1.00 3.00 O ATOM 297 N ALA 75 -4.564 -13.211 1.161 1.00 3.00 N ATOM 298 CA ALA 75 -3.600 -14.261 0.866 1.00 3.00 C ATOM 299 C ALA 75 -3.579 -15.225 -0.313 1.00 3.00 C ATOM 300 O ALA 75 -4.635 -15.807 -0.586 1.00 3.00 O ATOM 301 N SER 76 -2.438 -15.388 -0.924 1.00 3.00 N ATOM 302 CA SER 76 -2.244 -16.241 -2.100 1.00 3.00 C ATOM 303 C SER 76 -2.511 -17.683 -1.885 1.00 3.00 C ATOM 304 O SER 76 -2.239 -18.163 -0.770 1.00 3.00 O ATOM 305 N HIS 77 -3.027 -18.355 -2.936 1.00 3.00 N ATOM 306 CA HIS 77 -3.267 -19.783 -2.821 1.00 3.00 C ATOM 307 C HIS 77 -3.715 -20.317 -4.170 1.00 3.00 C ATOM 308 O HIS 77 -4.212 -19.519 -5.001 1.00 3.00 O ATOM 309 N MET 78 -3.501 -21.613 -4.264 1.00 3.00 N ATOM 310 CA MET 78 -3.958 -22.311 -5.565 1.00 3.00 C ATOM 311 C MET 78 -4.425 -23.689 -5.226 1.00 3.00 C ATOM 312 O MET 78 -5.672 -23.777 -5.048 1.00 3.00 O ATOM 313 N LYS 79 -3.627 -24.662 -4.917 1.00 3.00 N ATOM 314 CA LYS 79 -4.084 -26.015 -4.594 1.00 3.00 C ATOM 315 C LYS 79 -4.770 -26.092 -3.249 1.00 3.00 C ATOM 316 O LYS 79 -5.677 -26.938 -3.277 1.00 3.00 O ATOM 317 N GLY 80 -4.375 -25.312 -2.236 1.00 3.00 N ATOM 318 CA GLY 80 -5.030 -25.447 -0.907 1.00 3.00 C ATOM 319 C GLY 80 -6.219 -25.464 0.037 1.00 3.00 C ATOM 320 O GLY 80 -7.259 -24.858 -0.231 1.00 3.00 O ATOM 321 N MET 81 -7.309 -24.693 4.062 1.00 3.00 N ATOM 322 CA MET 81 -6.871 -23.894 5.207 1.00 3.00 C ATOM 323 C MET 81 -7.746 -24.095 6.436 1.00 3.00 C ATOM 324 O MET 81 -8.962 -24.251 6.328 1.00 3.00 O ATOM 325 N LYS 82 -7.110 -24.072 7.604 1.00 3.00 N ATOM 326 CA LYS 82 -7.784 -24.289 8.878 1.00 3.00 C ATOM 327 C LYS 82 -7.112 -23.430 9.929 1.00 3.00 C ATOM 328 O LYS 82 -5.897 -23.267 9.907 1.00 3.00 O ATOM 329 N GLY 83 -7.897 -22.864 10.839 1.00 3.00 N ATOM 330 CA GLY 83 -7.324 -22.146 11.971 1.00 3.00 C ATOM 331 C GLY 83 -8.092 -20.926 12.422 1.00 3.00 C ATOM 332 O GLY 83 -8.893 -20.363 11.672 1.00 3.00 O ATOM 333 N ALA 84 -7.716 -17.046 14.695 1.00 3.00 N ATOM 334 CA ALA 84 -6.850 -15.978 15.156 1.00 3.00 C ATOM 335 C ALA 84 -7.481 -15.317 16.360 1.00 3.00 C ATOM 336 O ALA 84 -8.699 -15.357 16.533 1.00 3.00 O ATOM 337 N THR 85 -6.651 -14.707 17.193 1.00 3.00 N ATOM 338 CA THR 85 -7.146 -13.920 18.309 1.00 3.00 C ATOM 339 C THR 85 -6.585 -12.512 18.228 1.00 3.00 C ATOM 340 O THR 85 -5.370 -12.322 18.133 1.00 3.00 O ATOM 341 N ALA 86 -7.477 -11.528 18.238 1.00 3.00 N ATOM 342 CA ALA 86 -7.074 -10.135 18.237 1.00 3.00 C ATOM 343 C ALA 86 -7.301 -9.601 19.640 1.00 3.00 C ATOM 344 O ALA 86 -8.442 -9.516 20.108 1.00 3.00 O ATOM 345 N GLU 87 -6.212 -9.278 20.327 1.00 3.00 N ATOM 346 CA GLU 87 -6.300 -8.749 21.679 1.00 3.00 C ATOM 347 C GLU 87 -6.066 -7.261 21.596 1.00 3.00 C ATOM 348 O GLU 87 -4.979 -6.831 21.201 1.00 3.00 O ATOM 349 N ILE 88 -7.064 -6.457 21.940 1.00 3.00 N ATOM 350 CA ILE 88 -6.770 -5.040 22.057 1.00 3.00 C ATOM 351 C ILE 88 -6.642 -4.697 23.534 1.00 3.00 C ATOM 352 O ILE 88 -7.549 -4.927 24.338 1.00 3.00 O ATOM 353 N ASP 89 -5.457 -4.212 23.877 1.00 3.00 N ATOM 354 CA ASP 89 -5.052 -4.041 25.255 1.00 3.00 C ATOM 355 C ASP 89 -5.894 -2.986 25.953 1.00 3.00 C ATOM 356 O ASP 89 -6.117 -1.896 25.422 1.00 3.00 O ATOM 357 N SER 90 -6.387 -3.341 27.133 1.00 3.00 N ATOM 358 CA SER 90 -7.300 -2.486 27.889 1.00 3.00 C ATOM 359 C SER 90 -7.685 -1.156 27.224 1.00 3.00 C ATOM 360 O SER 90 -7.030 -0.118 27.450 1.00 3.00 O ATOM 361 N ALA 91 -8.736 -1.246 26.421 1.00 3.00 N ATOM 362 CA ALA 91 -9.285 -0.096 25.669 1.00 3.00 C ATOM 363 C ALA 91 -10.762 0.137 26.032 1.00 3.00 C ATOM 364 O ALA 91 -11.498 -0.808 26.347 1.00 3.00 O ATOM 365 N GLU 92 -11.146 1.408 25.981 1.00 3.00 N ATOM 366 CA GLU 92 -12.533 1.846 26.281 1.00 3.00 C ATOM 367 C GLU 92 -13.488 1.240 25.260 1.00 3.00 C ATOM 368 O GLU 92 -13.343 1.453 24.042 1.00 3.00 O ATOM 369 N LYS 93 -14.450 0.479 25.756 1.00 9.00 N ATOM 370 CA LYS 93 -15.420 -0.214 24.889 1.00 9.00 C ATOM 371 C LYS 93 -16.864 0.274 25.084 1.00 9.00 C ATOM 372 O LYS 93 -17.809 -0.297 24.509 1.00 9.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 256 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 78.50 43.7 126 100.0 126 ARMSMC SECONDARY STRUCTURE . . 63.14 50.0 52 100.0 52 ARMSMC SURFACE . . . . . . . . 80.14 42.7 82 100.0 82 ARMSMC BURIED . . . . . . . . 75.35 45.5 44 100.0 44 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 52 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 47 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 23 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 35 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 38 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 32 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 15 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 14 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 4 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 7 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 1 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 11.99 (Number of atoms: 64) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 11.99 64 100.0 64 CRMSCA CRN = ALL/NP . . . . . 0.1874 CRMSCA SECONDARY STRUCTURE . . 11.28 26 100.0 26 CRMSCA SURFACE . . . . . . . . 12.42 42 100.0 42 CRMSCA BURIED . . . . . . . . 11.14 22 100.0 22 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 11.97 256 81.5 314 CRMSMC SECONDARY STRUCTURE . . 11.25 104 80.0 130 CRMSMC SURFACE . . . . . . . . 12.28 168 82.0 205 CRMSMC BURIED . . . . . . . . 11.36 88 80.7 109 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 710 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 674 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 312 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 464 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 246 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.97 256 26.5 966 CRMSALL SECONDARY STRUCTURE . . 11.25 104 25.0 416 CRMSALL SURFACE . . . . . . . . 12.28 168 26.6 632 CRMSALL BURIED . . . . . . . . 11.36 88 26.3 334 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.165 0.535 0.267 64 100.0 64 ERRCA SECONDARY STRUCTURE . . 7.709 0.522 0.261 26 100.0 26 ERRCA SURFACE . . . . . . . . 8.521 0.544 0.272 42 100.0 42 ERRCA BURIED . . . . . . . . 7.485 0.517 0.258 22 100.0 22 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.148 0.534 0.267 256 81.5 314 ERRMC SECONDARY STRUCTURE . . 7.706 0.524 0.262 104 80.0 130 ERRMC SURFACE . . . . . . . . 8.356 0.536 0.268 168 82.0 205 ERRMC BURIED . . . . . . . . 7.753 0.530 0.265 88 80.7 109 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 710 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 674 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 312 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 464 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 246 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.148 0.534 0.267 256 26.5 966 ERRALL SECONDARY STRUCTURE . . 7.706 0.524 0.262 104 25.0 416 ERRALL SURFACE . . . . . . . . 8.356 0.536 0.268 168 26.6 632 ERRALL BURIED . . . . . . . . 7.753 0.530 0.265 88 26.3 334 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 4 22 64 64 DISTCA CA (P) 0.00 0.00 0.00 6.25 34.38 64 DISTCA CA (RMS) 0.00 0.00 0.00 4.28 8.03 DISTCA ALL (N) 0 0 0 18 79 256 966 DISTALL ALL (P) 0.00 0.00 0.00 1.86 8.18 966 DISTALL ALL (RMS) 0.00 0.00 0.00 4.20 7.85 DISTALL END of the results output