####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 123 ( 492), selected 123 , name T0579TS328_1 # Molecule2: number of CA atoms 124 ( 1877), selected 123 , name T0579.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0579TS328_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 85 - 107 4.92 26.12 LONGEST_CONTINUOUS_SEGMENT: 23 86 - 108 4.97 26.35 LCS_AVERAGE: 13.99 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 90 - 100 1.97 27.87 LCS_AVERAGE: 5.93 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 91 - 98 0.97 31.02 LCS_AVERAGE: 3.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 123 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 4 11 3 4 4 4 4 4 8 12 12 13 14 15 16 18 19 22 23 26 28 29 LCS_GDT K 2 K 2 4 4 16 3 4 4 4 6 7 7 10 11 11 13 15 16 18 19 22 24 27 28 29 LCS_GDT V 3 V 3 6 9 16 3 4 6 7 8 8 9 9 11 12 13 14 16 17 19 21 24 27 28 29 LCS_GDT G 4 G 4 6 9 16 3 4 6 7 8 8 9 10 11 13 14 14 15 15 17 20 21 22 24 25 LCS_GDT S 5 S 5 6 9 16 3 4 6 7 8 8 9 10 11 13 14 14 15 15 17 20 21 22 24 25 LCS_GDT Q 6 Q 6 6 9 16 3 5 6 7 8 8 9 11 11 13 14 14 15 15 17 20 21 22 24 25 LCS_GDT V 7 V 7 6 9 16 3 5 6 7 8 9 10 11 11 13 14 14 15 15 17 20 21 27 28 28 LCS_GDT I 8 I 8 6 9 16 3 5 6 7 8 9 10 11 11 13 14 14 15 15 19 24 24 27 28 28 LCS_GDT I 9 I 9 6 9 16 3 5 6 7 8 9 10 11 11 13 14 14 15 17 20 24 24 27 28 28 LCS_GDT N 10 N 10 6 9 16 3 5 6 7 8 9 10 11 11 13 14 14 15 17 19 24 24 27 28 28 LCS_GDT T 11 T 11 6 9 16 3 5 6 6 8 9 10 11 11 13 14 14 15 16 17 22 23 26 27 28 LCS_GDT S 12 S 12 3 8 16 0 3 3 4 7 9 10 11 11 13 14 14 15 16 17 20 21 22 23 25 LCS_GDT H 13 H 13 3 8 16 3 3 3 6 8 9 10 11 11 13 14 14 15 16 17 20 21 22 25 29 LCS_GDT M 14 M 14 3 8 16 3 3 3 6 8 8 10 11 11 13 14 14 15 16 19 20 23 24 28 30 LCS_GDT K 15 K 15 3 7 16 3 3 3 4 8 9 10 11 11 13 14 15 16 18 20 24 24 27 28 31 LCS_GDT G 16 G 16 3 7 16 3 3 3 4 7 9 10 11 11 13 14 15 16 17 20 24 24 27 28 31 LCS_GDT M 17 M 17 3 4 16 3 3 3 3 4 7 8 10 11 13 14 15 16 17 19 24 24 27 28 30 LCS_GDT K 18 K 18 4 6 16 3 3 4 4 6 7 8 8 10 13 14 15 16 17 20 24 24 27 28 29 LCS_GDT G 19 G 19 4 7 16 3 3 4 5 7 8 9 10 10 11 12 13 14 17 19 21 23 27 28 29 LCS_GDT A 20 A 20 6 7 16 3 4 6 6 7 8 9 10 10 11 12 14 15 17 19 21 24 27 28 29 LCS_GDT E 21 E 21 6 7 16 3 5 6 6 7 8 9 10 10 11 12 15 16 17 19 22 24 27 28 29 LCS_GDT A 22 A 22 6 7 14 3 5 6 6 7 8 9 12 12 13 14 15 16 18 19 22 24 27 28 29 LCS_GDT T 23 T 23 6 7 14 3 5 6 6 7 8 9 12 12 13 14 15 16 18 19 22 24 27 28 29 LCS_GDT V 24 V 24 6 7 14 3 5 6 6 7 8 9 12 12 13 14 15 16 18 19 22 24 27 28 29 LCS_GDT T 25 T 25 6 7 14 3 5 6 6 7 8 8 10 10 11 12 13 16 18 19 22 24 27 28 29 LCS_GDT G 26 G 26 4 7 14 3 3 4 5 6 8 9 10 10 11 12 13 13 18 22 24 26 26 30 33 LCS_GDT A 27 A 27 3 7 17 3 3 3 4 7 8 9 11 12 14 15 19 19 21 22 24 27 30 31 34 LCS_GDT Y 28 Y 28 6 7 17 5 5 6 8 9 10 12 14 15 16 18 19 20 22 25 26 28 31 32 34 LCS_GDT D 29 D 29 6 7 17 5 5 6 6 7 7 11 14 15 17 18 19 20 22 25 26 29 34 35 36 LCS_GDT T 30 T 30 6 7 17 5 5 6 6 10 11 13 14 15 17 18 19 20 22 25 26 29 34 35 36 LCS_GDT T 31 T 31 6 7 17 5 5 6 6 7 9 11 14 15 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT A 32 A 32 6 7 17 5 6 6 8 10 11 13 14 15 17 18 19 20 22 25 26 29 34 35 36 LCS_GDT Y 33 Y 33 6 7 17 3 6 6 8 10 11 13 14 15 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT V 34 V 34 6 7 17 3 6 6 8 10 11 13 14 15 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT V 35 V 35 6 7 17 3 6 6 8 10 11 13 14 15 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT S 36 S 36 6 7 17 3 6 6 8 10 11 13 14 15 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT Y 37 Y 37 6 7 17 3 6 6 8 10 11 13 14 15 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT T 38 T 38 6 7 17 3 5 6 8 10 11 13 14 15 17 18 19 20 22 25 26 29 34 35 36 LCS_GDT P 39 P 39 3 7 17 3 3 4 6 10 11 13 14 15 17 18 19 20 21 22 26 28 34 35 36 LCS_GDT T 40 T 40 3 7 17 3 3 4 6 8 9 11 13 14 16 18 19 20 21 22 24 27 30 31 34 LCS_GDT N 41 N 41 3 6 17 3 3 3 4 10 11 13 14 15 17 18 19 20 21 22 26 28 31 35 36 LCS_GDT G 42 G 42 4 6 17 3 4 5 8 10 11 13 14 15 17 18 19 20 22 25 26 28 34 35 36 LCS_GDT G 43 G 43 4 6 17 3 4 5 5 6 6 7 13 15 15 16 18 20 22 25 26 29 34 35 36 LCS_GDT Q 44 Q 44 4 6 17 3 4 5 5 6 6 9 10 10 12 13 15 18 21 25 26 29 31 31 35 LCS_GDT R 45 R 45 4 7 17 3 6 6 6 7 7 10 12 12 13 15 16 16 18 19 22 24 27 28 29 LCS_GDT V 46 V 46 4 7 17 3 4 5 5 6 6 7 10 12 14 15 16 16 18 20 22 24 27 28 29 LCS_GDT D 47 D 47 5 7 17 3 6 6 6 7 7 10 12 12 14 15 16 16 18 20 22 24 27 28 29 LCS_GDT H 48 H 48 5 7 17 3 6 6 6 8 9 10 12 12 14 15 16 16 18 20 22 24 27 28 29 LCS_GDT H 49 H 49 5 7 17 3 6 6 6 7 9 10 12 12 14 15 16 16 18 20 22 24 27 28 30 LCS_GDT K 50 K 50 5 7 17 3 6 6 6 8 9 10 12 12 14 15 16 16 18 20 22 25 27 28 30 LCS_GDT W 51 W 51 5 7 17 3 6 6 6 8 9 10 10 12 14 15 16 16 18 20 22 25 27 28 30 LCS_GDT V 52 V 52 5 6 17 3 4 5 5 8 9 10 10 12 14 15 16 16 18 20 22 25 27 29 31 LCS_GDT I 53 I 53 5 6 17 3 4 5 5 8 9 10 10 12 14 15 16 16 18 20 24 25 27 29 31 LCS_GDT Q 54 Q 54 5 6 17 3 4 5 5 8 9 9 10 11 12 15 16 16 18 20 22 25 27 29 31 LCS_GDT E 55 E 55 3 6 17 3 3 4 5 8 9 9 10 11 13 15 17 17 19 22 24 26 27 29 32 LCS_GDT E 56 E 56 4 5 17 3 4 4 4 5 7 8 11 12 15 16 17 18 21 22 24 26 27 29 31 LCS_GDT I 57 I 57 4 5 15 3 4 6 7 8 9 9 11 12 15 16 19 19 21 22 24 26 27 30 34 LCS_GDT K 58 K 58 4 5 15 3 4 4 5 5 7 8 10 12 14 17 19 19 21 22 24 26 27 28 32 LCS_GDT D 59 D 59 4 5 15 3 4 4 5 7 7 8 11 12 15 17 19 19 21 21 24 25 27 28 32 LCS_GDT A 60 A 60 3 5 15 3 3 4 7 8 9 9 11 12 15 17 17 19 21 21 24 26 27 28 32 LCS_GDT G 61 G 61 3 5 15 3 5 5 5 8 8 10 11 12 15 17 19 19 21 22 24 26 28 31 34 LCS_GDT D 62 D 62 3 5 15 3 3 4 7 7 9 10 11 12 15 16 19 19 21 22 24 26 27 29 34 LCS_GDT K 63 K 63 4 5 15 3 4 4 5 7 7 10 11 12 15 16 19 19 22 25 26 28 29 31 34 LCS_GDT T 64 T 64 4 5 15 3 4 5 5 7 8 11 13 15 15 16 19 20 22 25 26 29 31 34 35 LCS_GDT L 65 L 65 4 5 15 4 4 4 5 6 7 9 11 12 15 16 17 19 21 22 24 27 31 33 35 LCS_GDT Q 66 Q 66 4 9 15 4 4 4 5 6 9 11 11 12 15 16 18 19 22 25 27 29 34 35 36 LCS_GDT P 67 P 67 4 9 15 4 4 5 7 9 10 11 11 13 15 16 17 19 22 24 27 29 34 35 36 LCS_GDT G 68 G 68 4 9 15 4 4 5 7 9 10 11 11 13 15 16 18 19 22 25 27 29 34 35 36 LCS_GDT D 69 D 69 4 9 15 3 4 6 7 9 10 11 11 13 15 16 18 19 22 25 27 29 34 35 36 LCS_GDT Q 70 Q 70 4 9 15 3 4 6 7 9 10 11 11 13 15 16 18 19 22 25 27 29 34 35 36 LCS_GDT V 71 V 71 5 9 15 3 4 5 7 9 10 12 16 17 18 19 20 21 22 25 27 29 34 35 36 LCS_GDT I 72 I 72 5 9 15 3 4 6 7 9 11 12 16 17 18 19 20 21 22 25 27 29 34 35 36 LCS_GDT L 73 L 73 5 9 15 3 5 6 8 10 11 13 14 15 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT E 74 E 74 5 9 15 3 4 6 7 10 11 13 14 15 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT A 75 A 75 5 9 15 3 4 5 6 9 10 11 11 13 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT S 76 S 76 4 6 15 3 4 4 5 6 7 9 11 13 17 18 19 20 22 25 27 29 34 35 36 LCS_GDT H 77 H 77 4 6 15 3 4 4 5 6 7 9 12 12 14 15 18 20 22 25 27 29 34 35 36 LCS_GDT M 78 M 78 3 6 15 3 3 4 5 5 7 9 12 12 14 15 16 20 22 25 27 29 34 35 36 LCS_GDT K 79 K 79 3 6 14 3 3 3 4 5 7 9 12 12 14 15 16 20 22 25 27 29 34 35 36 LCS_GDT G 80 G 80 3 6 14 3 3 3 4 5 7 8 10 12 14 15 16 20 22 25 27 29 34 35 36 LCS_GDT M 81 M 81 3 3 16 3 3 3 4 6 7 9 10 11 11 15 16 19 22 25 27 29 34 35 36 LCS_GDT K 82 K 82 3 3 18 3 3 3 3 3 3 5 10 11 11 13 15 20 22 25 27 29 34 35 36 LCS_GDT G 83 G 83 3 6 21 3 3 3 3 4 6 11 13 13 14 16 16 20 22 25 27 29 34 35 36 LCS_GDT A 84 A 84 6 9 21 3 5 6 7 9 11 12 13 13 15 17 19 19 22 25 27 29 34 35 36 LCS_GDT T 85 T 85 6 9 23 3 5 6 7 9 11 12 14 15 17 18 19 19 22 25 27 29 34 35 36 LCS_GDT A 86 A 86 6 9 23 3 5 6 7 10 11 13 14 15 17 19 19 20 22 24 27 29 34 35 36 LCS_GDT E 87 E 87 6 9 23 3 5 6 7 10 11 13 14 16 17 19 20 21 22 23 26 28 31 34 36 LCS_GDT I 88 I 88 6 9 23 3 5 6 8 10 12 13 16 17 18 19 20 21 22 23 26 27 30 33 34 LCS_GDT D 89 D 89 6 9 23 3 5 6 8 10 11 13 16 17 18 19 20 21 22 23 25 27 30 31 33 LCS_GDT S 90 S 90 4 11 23 3 5 6 8 10 12 13 16 17 18 19 20 21 22 23 24 26 30 31 33 LCS_GDT A 91 A 91 8 11 23 3 6 8 9 10 12 13 16 17 18 19 20 21 22 23 25 27 30 31 33 LCS_GDT E 92 E 92 8 11 23 3 6 8 9 10 12 13 16 17 18 19 20 21 22 23 24 26 30 31 33 LCS_GDT K 93 K 93 8 11 23 3 6 8 9 10 12 13 16 17 18 19 20 21 22 23 24 26 30 31 33 LCS_GDT T 94 T 94 8 11 23 3 6 8 9 10 12 13 16 17 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT T 95 T 95 8 11 23 3 6 8 9 10 12 13 16 17 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT V 96 V 96 8 11 23 3 6 8 9 10 12 13 16 17 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT Y 97 Y 97 8 11 23 3 6 8 9 10 12 13 16 17 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT M 98 M 98 8 11 23 3 5 8 9 10 12 13 16 17 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT V 99 V 99 6 11 23 3 5 8 9 10 12 13 16 17 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT D 100 D 100 4 11 23 3 5 5 7 10 12 13 15 17 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT Y 101 Y 101 4 8 23 3 5 5 7 9 11 13 15 16 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT T 102 T 102 4 8 23 3 5 5 7 9 9 12 14 16 18 19 20 21 22 23 24 26 27 27 29 LCS_GDT S 103 S 103 4 8 23 3 3 4 5 6 7 8 11 14 18 18 19 19 21 23 24 24 25 26 27 LCS_GDT T 104 T 104 4 8 23 3 3 5 7 9 9 12 14 16 18 19 19 21 22 23 24 24 25 26 28 LCS_GDT T 105 T 105 4 8 23 3 5 5 7 9 9 9 11 14 18 18 19 19 21 22 24 24 25 26 27 LCS_GDT S 106 S 106 4 8 23 3 4 5 7 9 9 12 14 16 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT G 107 G 107 5 8 23 3 4 5 7 8 9 10 15 16 18 19 20 21 22 23 24 26 27 28 29 LCS_GDT E 108 E 108 5 8 23 4 4 5 7 8 9 12 16 17 17 18 19 20 22 22 24 26 27 28 29 LCS_GDT K 109 K 109 5 8 19 4 4 5 6 10 11 12 16 17 17 17 18 19 20 22 24 26 27 28 29 LCS_GDT V 110 V 110 5 8 19 4 4 5 7 8 9 9 11 12 15 17 17 18 20 22 24 25 26 28 29 LCS_GDT K 111 K 111 5 8 19 4 4 5 7 8 9 9 10 11 11 15 17 18 20 22 24 25 26 27 29 LCS_GDT N 112 N 112 3 8 19 3 3 3 4 8 9 9 10 11 12 15 17 18 19 22 24 25 26 27 29 LCS_GDT H 113 H 113 3 8 19 3 3 5 7 8 9 9 10 11 12 17 17 18 20 22 24 25 26 28 29 LCS_GDT K 114 K 114 5 6 18 3 3 5 7 7 8 9 9 10 12 14 14 16 19 20 21 23 25 27 29 LCS_GDT W 115 W 115 5 6 15 4 4 5 7 7 8 9 9 10 12 14 14 15 19 20 21 23 25 27 29 LCS_GDT V 116 V 116 5 6 15 4 4 5 7 7 8 8 10 11 12 14 14 15 19 20 21 23 26 27 29 LCS_GDT T 117 T 117 5 6 15 4 4 5 7 7 8 8 10 12 13 15 16 17 20 22 24 26 27 28 29 LCS_GDT E 118 E 118 5 6 15 4 4 5 7 7 8 8 9 12 13 15 17 19 20 22 24 26 27 28 30 LCS_GDT D 119 D 119 3 6 14 3 3 4 7 7 8 8 10 11 15 16 17 19 21 22 24 26 27 28 30 LCS_GDT E 120 E 120 4 5 13 4 4 4 4 5 7 8 10 11 15 16 17 19 21 22 23 26 27 28 30 LCS_GDT L 121 L 121 4 5 12 4 4 4 6 6 7 7 10 11 15 16 17 19 21 22 24 26 27 28 30 LCS_GDT S 122 S 122 4 5 12 4 4 4 5 5 5 7 11 11 15 16 17 18 21 22 24 26 27 28 30 LCS_GDT A 123 A 123 4 5 12 4 4 4 4 5 5 5 7 9 15 16 17 18 21 21 24 25 26 28 30 LCS_AVERAGE LCS_A: 7.93 ( 3.87 5.93 13.99 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 8 9 10 12 13 16 17 18 19 20 21 22 25 27 29 34 35 36 GDT PERCENT_AT 4.03 4.84 6.45 7.26 8.06 9.68 10.48 12.90 13.71 14.52 15.32 16.13 16.94 17.74 20.16 21.77 23.39 27.42 28.23 29.03 GDT RMS_LOCAL 0.36 0.64 0.97 1.13 1.73 2.18 2.28 2.82 2.94 3.29 3.38 3.63 3.92 4.14 5.60 5.79 6.05 6.59 6.69 6.80 GDT RMS_ALL_AT 28.59 29.01 31.02 30.03 26.12 26.50 26.19 26.79 26.68 25.92 26.01 25.93 26.04 25.92 29.98 29.73 29.57 28.29 28.23 28.06 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 29.177 4 0.069 0.069 31.200 0.000 0.000 LGA K 2 K 2 34.717 5 0.021 0.021 34.817 0.000 0.000 LGA V 3 V 3 36.299 3 0.043 0.043 41.073 0.000 0.000 LGA G 4 G 4 42.345 0 0.700 0.700 43.401 0.000 0.000 LGA S 5 S 5 44.416 2 0.141 0.141 45.295 0.000 0.000 LGA Q 6 Q 6 47.864 5 0.026 0.026 47.864 0.000 0.000 LGA V 7 V 7 47.114 3 0.047 0.047 48.976 0.000 0.000 LGA I 8 I 8 51.066 4 0.055 0.055 51.066 0.000 0.000 LGA I 9 I 9 49.780 4 0.073 0.073 52.795 0.000 0.000 LGA N 10 N 10 53.684 4 0.579 0.579 53.684 0.000 0.000 LGA T 11 T 11 52.560 3 0.067 0.067 53.641 0.000 0.000 LGA S 12 S 12 54.329 2 0.632 0.632 54.593 0.000 0.000 LGA H 13 H 13 50.399 6 0.605 0.605 51.422 0.000 0.000 LGA M 14 M 14 52.719 4 0.030 0.030 54.200 0.000 0.000 LGA K 15 K 15 53.499 5 0.330 0.330 53.923 0.000 0.000 LGA G 16 G 16 51.966 0 0.645 0.645 52.372 0.000 0.000 LGA M 17 M 17 48.913 4 0.659 0.659 49.588 0.000 0.000 LGA K 18 K 18 47.243 5 0.081 0.081 47.882 0.000 0.000 LGA G 19 G 19 47.470 0 0.672 0.672 47.899 0.000 0.000 LGA A 20 A 20 43.587 1 0.053 0.053 44.524 0.000 0.000 LGA E 21 E 21 41.586 5 0.145 0.145 42.370 0.000 0.000 LGA A 22 A 22 35.820 1 0.105 0.105 37.885 0.000 0.000 LGA T 23 T 23 33.486 3 0.055 0.055 34.060 0.000 0.000 LGA V 24 V 24 28.279 3 0.102 0.102 30.548 0.000 0.000 LGA T 25 T 25 24.767 3 0.649 0.649 25.602 0.000 0.000 LGA G 26 G 26 20.019 0 0.071 0.071 21.661 0.000 0.000 LGA A 27 A 27 17.070 1 0.619 0.619 18.005 0.000 0.000 LGA Y 28 Y 28 17.946 8 0.548 0.548 20.725 0.000 0.000 LGA D 29 D 29 21.668 4 0.419 0.419 23.122 0.000 0.000 LGA T 30 T 30 21.320 3 0.082 0.082 21.320 0.000 0.000 LGA T 31 T 31 20.822 3 0.016 0.016 21.336 0.000 0.000 LGA A 32 A 32 16.695 1 0.591 0.591 18.133 0.000 0.000 LGA Y 33 Y 33 14.926 8 0.049 0.049 15.201 0.000 0.000 LGA V 34 V 34 16.425 3 0.043 0.043 16.425 0.000 0.000 LGA V 35 V 35 13.698 3 0.140 0.140 15.090 0.000 0.000 LGA S 36 S 36 15.083 2 0.027 0.027 15.083 0.000 0.000 LGA Y 37 Y 37 13.665 8 0.624 0.624 17.109 0.000 0.000 LGA T 38 T 38 16.421 3 0.049 0.049 16.421 0.000 0.000 LGA P 39 P 39 18.101 3 0.198 0.198 19.000 0.000 0.000 LGA T 40 T 40 18.458 3 0.567 0.567 19.865 0.000 0.000 LGA N 41 N 41 23.513 4 0.441 0.441 25.969 0.000 0.000 LGA G 42 G 42 27.143 0 0.455 0.455 30.256 0.000 0.000 LGA G 43 G 43 32.062 0 0.124 0.124 33.421 0.000 0.000 LGA Q 44 Q 44 36.832 5 0.046 0.046 37.116 0.000 0.000 LGA R 45 R 45 37.990 7 0.120 0.120 40.841 0.000 0.000 LGA V 46 V 46 41.257 3 0.427 0.427 41.257 0.000 0.000 LGA D 47 D 47 38.395 4 0.098 0.098 39.544 0.000 0.000 LGA H 48 H 48 35.761 6 0.483 0.483 37.288 0.000 0.000 LGA H 49 H 49 33.991 6 0.086 0.086 34.221 0.000 0.000 LGA K 50 K 50 32.677 5 0.071 0.071 33.709 0.000 0.000 LGA W 51 W 51 29.923 10 0.202 0.202 31.785 0.000 0.000 LGA V 52 V 52 25.408 3 0.069 0.069 26.931 0.000 0.000 LGA I 53 I 53 22.353 4 0.226 0.226 23.340 0.000 0.000 LGA Q 54 Q 54 22.026 5 0.497 0.497 22.113 0.000 0.000 LGA E 55 E 55 21.924 5 0.618 0.618 21.924 0.000 0.000 LGA E 56 E 56 19.961 5 0.580 0.580 20.765 0.000 0.000 LGA I 57 I 57 16.637 4 0.056 0.056 20.600 0.000 0.000 LGA K 58 K 58 21.318 5 0.543 0.543 21.913 0.000 0.000 LGA D 59 D 59 22.477 4 0.230 0.230 22.477 0.000 0.000 LGA A 60 A 60 21.379 1 0.355 0.355 21.725 0.000 0.000 LGA G 61 G 61 22.275 0 0.069 0.069 24.099 0.000 0.000 LGA D 62 D 62 25.509 4 0.289 0.289 26.146 0.000 0.000 LGA K 63 K 63 23.460 5 0.630 0.630 23.888 0.000 0.000 LGA T 64 T 64 19.220 3 0.117 0.117 20.928 0.000 0.000 LGA L 65 L 65 18.985 4 0.605 0.605 19.031 0.000 0.000 LGA Q 66 Q 66 18.739 5 0.054 0.054 18.739 0.000 0.000 LGA P 67 P 67 14.813 3 0.093 0.093 17.563 0.000 0.000 LGA G 68 G 68 13.606 0 0.663 0.663 13.842 0.000 0.000 LGA D 69 D 69 13.242 4 0.661 0.661 13.277 0.000 0.000 LGA Q 70 Q 70 9.481 5 0.121 0.121 10.887 4.643 2.063 LGA V 71 V 71 3.046 3 0.070 0.070 5.409 38.095 21.769 LGA I 72 I 72 3.712 4 0.079 0.079 6.102 34.762 17.381 LGA L 73 L 73 10.265 4 0.038 0.038 11.123 1.786 0.893 LGA E 74 E 74 13.081 5 0.646 0.646 16.412 0.000 0.000 LGA A 75 A 75 20.375 1 0.197 0.197 21.572 0.000 0.000 LGA S 76 S 76 24.872 2 0.095 0.095 28.348 0.000 0.000 LGA H 77 H 77 31.525 6 0.704 0.704 33.467 0.000 0.000 LGA M 78 M 78 34.320 4 0.394 0.394 34.320 0.000 0.000 LGA K 79 K 79 35.561 5 0.658 0.658 35.879 0.000 0.000 LGA G 80 G 80 31.127 0 0.562 0.562 32.166 0.000 0.000 LGA M 81 M 81 27.777 4 0.591 0.591 29.335 0.000 0.000 LGA K 82 K 82 25.792 5 0.090 0.090 26.616 0.000 0.000 LGA G 83 G 83 21.385 0 0.672 0.672 22.577 0.000 0.000 LGA A 84 A 84 16.799 1 0.066 0.066 17.955 0.000 0.000 LGA T 85 T 85 13.537 3 0.061 0.061 14.745 0.000 0.000 LGA A 86 A 86 9.201 1 0.141 0.141 10.646 2.738 2.190 LGA E 87 E 87 7.145 5 0.068 0.068 7.911 17.381 7.725 LGA I 88 I 88 2.631 4 0.069 0.069 4.311 45.357 22.679 LGA D 89 D 89 3.691 4 0.610 0.610 3.691 55.833 27.917 LGA S 90 S 90 3.309 2 0.258 0.258 5.018 42.381 28.254 LGA A 91 A 91 3.530 1 0.066 0.066 3.530 59.524 47.619 LGA E 92 E 92 2.656 5 0.070 0.070 3.503 51.905 23.069 LGA K 93 K 93 2.824 5 0.459 0.459 4.435 54.048 24.021 LGA T 94 T 94 1.450 3 0.073 0.073 1.802 79.286 45.306 LGA T 95 T 95 3.029 3 0.027 0.027 3.029 61.190 34.966 LGA V 96 V 96 0.708 3 0.152 0.152 1.592 86.071 49.184 LGA Y 97 Y 97 0.961 8 0.081 0.081 0.961 90.476 30.159 LGA M 98 M 98 1.009 4 0.035 0.035 1.009 88.214 44.107 LGA V 99 V 99 1.210 3 0.178 0.178 2.060 79.524 45.442 LGA D 100 D 100 4.788 4 0.094 0.094 6.209 28.333 14.167 LGA Y 101 Y 101 7.615 8 0.044 0.044 8.892 7.500 2.500 LGA T 102 T 102 11.871 3 0.196 0.196 13.773 0.000 0.000 LGA S 103 S 103 15.587 2 0.373 0.373 15.587 0.000 0.000 LGA T 104 T 104 14.989 3 0.669 0.669 16.787 0.000 0.000 LGA T 105 T 105 17.004 3 0.621 0.621 17.004 0.000 0.000 LGA S 106 S 106 12.777 2 0.588 0.588 14.389 0.000 0.000 LGA G 107 G 107 8.224 0 0.050 0.050 9.564 14.524 14.524 LGA E 108 E 108 3.755 5 0.437 0.437 5.821 33.571 14.921 LGA K 109 K 109 3.948 5 0.211 0.211 5.578 37.024 16.455 LGA V 110 V 110 8.321 3 0.118 0.118 9.864 4.762 2.721 LGA K 111 K 111 13.037 5 0.617 0.617 14.500 0.000 0.000 LGA N 112 N 112 13.062 4 0.291 0.291 13.600 0.000 0.000 LGA H 113 H 113 10.218 6 0.584 0.584 11.889 0.000 0.000 LGA K 114 K 114 15.707 5 0.096 0.096 15.707 0.000 0.000 LGA W 115 W 115 14.559 10 0.051 0.051 15.293 0.000 0.000 LGA V 116 V 116 12.883 3 0.044 0.044 13.433 0.000 0.000 LGA T 117 T 117 10.846 3 0.118 0.118 11.385 0.000 0.000 LGA E 118 E 118 11.125 5 0.634 0.634 11.125 1.905 0.847 LGA D 119 D 119 9.094 4 0.587 0.587 10.389 0.357 0.179 LGA E 120 E 120 13.861 5 0.655 0.655 14.912 0.000 0.000 LGA L 121 L 121 17.616 4 0.029 0.029 18.688 0.000 0.000 LGA S 122 S 122 21.730 2 0.107 0.107 24.256 0.000 0.000 LGA A 123 A 123 26.905 1 0.019 0.019 28.690 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 123 492 492 100.00 936 492 52.56 124 SUMMARY(RMSD_GDC): 20.843 20.879 20.879 8.235 4.363 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 123 124 4.0 16 2.82 11.694 10.209 0.549 LGA_LOCAL RMSD: 2.817 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 26.789 Number of assigned atoms: 123 Std_ASGN_ATOMS RMSD: 20.843 Standard rmsd on all 123 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.712446 * X + 0.438644 * Y + -0.547734 * Z + 69.111046 Y_new = 0.689137 * X + 0.290158 * Y + -0.664002 * Z + 61.074978 Z_new = -0.132331 * X + -0.850529 * Y + -0.509008 * Z + 138.027039 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.372824 0.132720 -2.110083 [DEG: 135.9528 7.6043 -120.8988 ] ZXZ: -0.689739 2.104828 -2.987244 [DEG: -39.5191 120.5978 -171.1564 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0579TS328_1 REMARK 2: T0579.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0579TS328_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 123 124 4.0 16 2.82 10.209 20.84 REMARK ---------------------------------------------------------- MOLECULE T0579TS328_1 PFRMAT TS TARGET T0579 MODEL 1 PARENT 2gsy_E ATOM 1 N MET 1 2.908 -6.274 13.624 1.00 3.00 ATOM 2 CA MET 1 1.616 -6.430 14.282 1.00 3.00 ATOM 3 C MET 1 1.642 -7.650 15.195 1.00 3.00 ATOM 4 O MET 1 2.563 -8.469 15.120 1.00 3.00 ATOM 5 N LYS 2 0.634 -7.768 16.052 1.00 3.00 ATOM 6 CA LYS 2 0.511 -8.934 16.906 1.00 3.00 ATOM 7 C LYS 2 -0.938 -9.393 16.998 1.00 3.00 ATOM 8 O LYS 2 -1.860 -8.588 16.832 1.00 3.00 ATOM 9 N VAL 3 -1.123 -10.690 17.245 1.00 3.00 ATOM 10 CA VAL 3 -2.448 -11.276 17.405 1.00 3.00 ATOM 11 C VAL 3 -2.539 -11.896 18.789 1.00 3.00 ATOM 12 O VAL 3 -1.705 -12.714 19.163 1.00 3.00 ATOM 13 N GLY 4 -3.548 -11.485 19.550 1.00 3.00 ATOM 14 CA GLY 4 -3.774 -12.009 20.890 1.00 3.00 ATOM 15 C GLY 4 -5.188 -12.530 21.027 1.00 3.00 ATOM 16 O GLY 4 -6.016 -12.338 20.139 1.00 3.00 ATOM 17 N SER 5 -5.471 -13.191 22.141 1.00 3.00 ATOM 18 CA SER 5 -6.804 -13.723 22.380 1.00 3.00 ATOM 19 C SER 5 -6.805 -15.230 22.449 1.00 3.00 ATOM 20 O SER 5 -5.746 -15.857 22.473 1.00 3.00 ATOM 21 N GLN 6 -8.000 -15.810 22.459 1.00 3.00 ATOM 22 CA GLN 6 -8.149 -17.224 22.731 1.00 3.00 ATOM 23 C GLN 6 -9.447 -17.769 22.182 1.00 3.00 ATOM 24 O GLN 6 -10.495 -17.133 22.295 1.00 3.00 ATOM 25 N VAL 7 -9.375 -18.953 21.589 1.00 3.00 ATOM 26 CA VAL 7 -10.570 -19.709 21.272 1.00 3.00 ATOM 27 C VAL 7 -10.692 -20.843 22.266 1.00 3.00 ATOM 28 O VAL 7 -9.686 -21.391 22.718 1.00 3.00 ATOM 29 N ILE 8 -11.928 -21.169 22.620 1.00 3.00 ATOM 30 CA ILE 8 -12.217 -22.242 23.555 1.00 3.00 ATOM 31 C ILE 8 -13.082 -23.268 22.834 1.00 3.00 ATOM 32 O ILE 8 -14.111 -22.923 22.251 1.00 3.00 ATOM 33 N ILE 9 -12.654 -24.527 22.876 1.00 3.00 ATOM 34 CA ILE 9 -13.352 -25.605 22.190 1.00 3.00 ATOM 35 C ILE 9 -13.956 -26.608 23.161 1.00 3.00 ATOM 36 O ILE 9 -13.314 -27.002 24.135 1.00 3.00 ATOM 37 N ASN 10 -15.194 -27.012 22.887 1.00 3.00 ATOM 38 CA ASN 10 -15.882 -28.039 23.665 1.00 3.00 ATOM 39 C ASN 10 -16.254 -29.177 22.722 1.00 3.00 ATOM 40 O ASN 10 -16.496 -28.941 21.537 1.00 3.00 ATOM 41 N THR 11 -16.318 -30.401 23.244 1.00 3.00 ATOM 42 CA THR 11 -16.721 -31.559 22.436 1.00 3.00 ATOM 43 C THR 11 -17.199 -32.752 23.276 1.00 3.00 ATOM 44 O THR 11 -16.815 -32.892 24.431 1.00 3.00 ATOM 45 N SER 12 -18.043 -33.607 22.711 1.00 3.00 ATOM 46 CA SER 12 -18.445 -34.834 23.410 1.00 3.00 ATOM 47 C SER 12 -17.750 -36.046 22.801 1.00 3.00 ATOM 48 O SER 12 -17.856 -37.161 23.309 1.00 3.00 ATOM 49 N HIS 13 -17.033 -35.800 21.709 1.00 3.00 ATOM 50 CA HIS 13 -16.404 -36.850 20.927 1.00 3.00 ATOM 51 C HIS 13 -14.935 -36.968 21.316 1.00 3.00 ATOM 52 O HIS 13 -14.192 -35.989 21.277 1.00 3.00 ATOM 53 N MET 14 -14.532 -38.173 21.697 1.00 3.00 ATOM 54 CA MET 14 -13.164 -38.433 22.110 1.00 3.00 ATOM 55 C MET 14 -12.249 -38.702 20.922 1.00 3.00 ATOM 56 O MET 14 -12.661 -39.296 19.928 1.00 3.00 ATOM 57 N LYS 15 -11.004 -38.255 21.039 1.00 3.00 ATOM 58 CA LYS 15 -9.989 -38.502 20.024 1.00 3.00 ATOM 59 C LYS 15 -9.962 -37.487 18.898 1.00 3.00 ATOM 60 O LYS 15 -9.582 -37.820 17.774 1.00 3.00 ATOM 61 N GLY 16 -10.359 -36.251 19.186 1.00 3.00 ATOM 62 CA GLY 16 -10.271 -35.209 18.169 1.00 3.00 ATOM 63 C GLY 16 -9.000 -34.396 18.331 1.00 3.00 ATOM 64 O GLY 16 -8.642 -33.993 19.438 1.00 3.00 ATOM 65 N MET 17 -8.320 -34.164 17.215 1.00 3.00 ATOM 66 CA MET 17 -7.082 -33.399 17.204 1.00 3.00 ATOM 67 C MET 17 -7.272 -32.169 16.315 1.00 3.00 ATOM 68 O MET 17 -7.736 -32.285 15.178 1.00 3.00 ATOM 69 N LYS 18 -6.927 -30.996 16.843 1.00 3.00 ATOM 70 CA LYS 18 -7.112 -29.747 16.109 1.00 3.00 ATOM 71 C LYS 18 -5.818 -29.129 15.620 1.00 3.00 ATOM 72 O LYS 18 -4.825 -29.076 16.348 1.00 3.00 ATOM 73 N GLY 19 -5.854 -28.660 14.379 1.00 3.00 ATOM 74 CA GLY 19 -4.795 -27.846 13.812 1.00 3.00 ATOM 75 C GLY 19 -5.392 -26.500 13.462 1.00 3.00 ATOM 76 O GLY 19 -6.548 -26.421 13.058 1.00 3.00 ATOM 77 N ALA 20 -4.617 -25.436 13.638 1.00 3.00 ATOM 78 CA ALA 20 -5.091 -24.099 13.327 1.00 3.00 ATOM 79 C ALA 20 -3.954 -23.213 12.842 1.00 3.00 ATOM 80 O ALA 20 -2.871 -23.195 13.428 1.00 3.00 ATOM 81 N GLU 21 -4.224 -22.483 11.764 1.00 3.00 ATOM 82 CA GLU 21 -3.228 -21.650 11.120 1.00 3.00 ATOM 83 C GLU 21 -3.808 -20.277 10.823 1.00 3.00 ATOM 84 O GLU 21 -4.955 -20.155 10.399 1.00 3.00 ATOM 85 N ALA 22 -3.005 -19.251 11.062 1.00 3.00 ATOM 86 CA ALA 22 -3.364 -17.901 10.676 1.00 3.00 ATOM 87 C ALA 22 -2.632 -17.488 9.412 1.00 3.00 ATOM 88 O ALA 22 -1.422 -17.671 9.293 1.00 3.00 ATOM 89 N THR 23 -3.391 -16.956 8.461 1.00 3.00 ATOM 90 CA THR 23 -2.831 -16.467 7.220 1.00 3.00 ATOM 91 C THR 23 -3.055 -14.972 7.151 1.00 3.00 ATOM 92 O THR 23 -4.162 -14.491 7.403 1.00 3.00 ATOM 93 N VAL 24 -2.000 -14.234 6.825 1.00 3.00 ATOM 94 CA VAL 24 -2.141 -12.822 6.512 1.00 3.00 ATOM 95 C VAL 24 -2.016 -12.665 5.007 1.00 3.00 ATOM 96 O VAL 24 -0.994 -13.026 4.416 1.00 3.00 ATOM 97 N THR 25 -3.074 -12.150 4.392 1.00 3.00 ATOM 98 CA THR 25 -3.195 -12.128 2.938 1.00 3.00 ATOM 99 C THR 25 -2.898 -10.739 2.386 1.00 3.00 ATOM 100 O THR 25 -3.327 -9.733 2.949 1.00 3.00 ATOM 101 N GLY 26 -2.157 -10.699 1.283 1.00 3.00 ATOM 102 CA GLY 26 -1.804 -9.443 0.636 1.00 3.00 ATOM 103 C GLY 26 -2.920 -8.906 -0.235 1.00 3.00 ATOM 104 O GLY 26 -3.896 -9.610 -0.521 1.00 3.00 ATOM 105 N ALA 27 -2.764 -7.656 -0.661 1.00 3.00 ATOM 106 CA ALA 27 -3.718 -6.995 -1.545 1.00 3.00 ATOM 107 C ALA 27 -4.009 -7.826 -2.800 1.00 3.00 ATOM 108 O ALA 27 -5.120 -7.793 -3.335 1.00 3.00 ATOM 109 N TYR 28 -3.019 -8.589 -3.251 1.00 3.00 ATOM 110 CA TYR 28 -3.173 -9.397 -4.456 1.00 3.00 ATOM 111 C TYR 28 -3.701 -10.811 -4.182 1.00 3.00 ATOM 112 O TYR 28 -3.617 -11.692 -5.042 1.00 3.00 ATOM 113 N ASP 29 -4.242 -11.026 -2.982 1.00 3.00 ATOM 114 CA ASP 29 -4.864 -12.308 -2.632 1.00 3.00 ATOM 115 C ASP 29 -3.857 -13.382 -2.267 1.00 3.00 ATOM 116 O ASP 29 -4.218 -14.512 -1.931 1.00 3.00 ATOM 117 N THR 30 -2.586 -13.005 -2.320 1.00 3.00 ATOM 118 CA THR 30 -1.455 -13.887 -2.054 1.00 3.00 ATOM 119 C THR 30 -1.171 -13.997 -0.559 1.00 3.00 ATOM 120 O THR 30 -1.352 -13.034 0.183 1.00 3.00 ATOM 121 N THR 31 -0.743 -15.174 -0.114 1.00 3.00 ATOM 122 CA THR 31 -0.369 -15.350 1.281 1.00 3.00 ATOM 123 C THR 31 0.964 -14.671 1.546 1.00 3.00 ATOM 124 O THR 31 1.978 -14.998 0.936 1.00 3.00 ATOM 125 N ALA 32 0.955 -13.709 2.452 1.00 3.00 ATOM 126 CA ALA 32 2.172 -13.003 2.803 1.00 3.00 ATOM 127 C ALA 32 2.844 -13.707 3.962 1.00 3.00 ATOM 128 O ALA 32 4.054 -13.924 3.951 1.00 3.00 ATOM 129 N TYR 33 2.044 -14.053 4.964 1.00 3.00 ATOM 130 CA TYR 33 2.527 -14.705 6.169 1.00 3.00 ATOM 131 C TYR 33 1.584 -15.821 6.571 1.00 3.00 ATOM 132 O TYR 33 0.362 -15.660 6.554 1.00 3.00 ATOM 133 N VAL 34 2.168 -16.954 6.928 1.00 3.00 ATOM 134 CA VAL 34 1.411 -18.092 7.409 1.00 3.00 ATOM 135 C VAL 34 2.008 -18.563 8.733 1.00 3.00 ATOM 136 O VAL 34 3.205 -18.844 8.817 1.00 3.00 ATOM 137 N VAL 35 1.176 -18.619 9.772 1.00 3.00 ATOM 138 CA VAL 35 1.625 -19.035 11.101 1.00 3.00 ATOM 139 C VAL 35 0.721 -20.074 11.741 1.00 3.00 ATOM 140 O VAL 35 -0.445 -19.811 12.027 1.00 3.00 ATOM 141 N SER 36 1.275 -21.256 11.976 1.00 3.00 ATOM 142 CA SER 36 0.569 -22.286 12.723 1.00 3.00 ATOM 143 C SER 36 0.362 -21.797 14.155 1.00 3.00 ATOM 144 O SER 36 1.314 -21.445 14.850 1.00 3.00 ATOM 145 N TYR 37 -0.897 -21.746 14.572 1.00 3.00 ATOM 146 CA TYR 37 -1.271 -21.230 15.886 1.00 3.00 ATOM 147 C TYR 37 -1.396 -22.378 16.886 1.00 3.00 ATOM 148 O TYR 37 -1.113 -22.224 18.078 1.00 3.00 ATOM 149 N THR 38 -1.832 -23.524 16.383 1.00 3.00 ATOM 150 CA THR 38 -1.846 -24.754 17.143 1.00 3.00 ATOM 151 C THR 38 -1.867 -25.890 16.141 1.00 3.00 ATOM 152 O THR 38 -2.770 -25.973 15.317 1.00 3.00 ATOM 153 N PRO 39 -0.849 -26.738 16.183 1.00 3.00 ATOM 154 CA PRO 39 -0.835 -27.946 15.366 1.00 3.00 ATOM 155 C PRO 39 -0.955 -29.131 16.304 1.00 3.00 ATOM 156 O PRO 39 -0.517 -29.050 17.449 1.00 3.00 ATOM 157 N THR 40 -1.557 -30.217 15.824 1.00 3.00 ATOM 158 CA THR 40 -1.767 -31.425 16.629 1.00 3.00 ATOM 159 C THR 40 -2.069 -31.102 18.101 1.00 3.00 ATOM 160 O THR 40 -1.163 -30.878 18.909 1.00 3.00 ATOM 161 N ASN 41 -3.355 -31.076 18.431 1.00 3.00 ATOM 162 CA ASN 41 -3.833 -30.535 19.696 1.00 3.00 ATOM 163 C ASN 41 -5.091 -31.289 20.114 1.00 3.00 ATOM 164 O ASN 41 -6.188 -30.990 19.637 1.00 3.00 ATOM 165 N GLY 42 -4.918 -32.270 20.995 1.00 3.00 ATOM 166 CA GLY 42 -6.015 -33.124 21.434 1.00 3.00 ATOM 167 C GLY 42 -7.077 -32.388 22.221 1.00 3.00 ATOM 168 O GLY 42 -6.766 -31.524 23.041 1.00 3.00 ATOM 169 N GLY 43 -8.337 -32.725 21.958 1.00 3.00 ATOM 170 CA GLY 43 -9.458 -32.151 22.689 1.00 3.00 ATOM 171 C GLY 43 -9.985 -33.147 23.706 1.00 3.00 ATOM 172 O GLY 43 -10.239 -34.306 23.375 1.00 3.00 ATOM 173 N GLN 44 -10.143 -32.687 24.943 1.00 3.00 ATOM 174 CA GLN 44 -10.735 -33.492 26.003 1.00 3.00 ATOM 175 C GLN 44 -12.242 -33.255 26.062 1.00 3.00 ATOM 176 O GLN 44 -12.725 -32.145 25.835 1.00 3.00 ATOM 177 N ARG 45 -12.966 -34.325 26.359 1.00 3.00 ATOM 178 CA ARG 45 -14.410 -34.317 26.488 1.00 3.00 ATOM 179 C ARG 45 -14.844 -33.579 27.764 1.00 3.00 ATOM 180 O ARG 45 -14.193 -33.695 28.803 1.00 3.00 ATOM 181 N VAL 46 -15.924 -32.803 27.665 1.00 3.00 ATOM 182 CA VAL 46 -16.536 -32.139 28.820 1.00 3.00 ATOM 183 C VAL 46 -15.709 -31.085 29.538 1.00 3.00 ATOM 184 O VAL 46 -15.938 -30.811 30.718 1.00 3.00 ATOM 185 N ASP 47 -14.753 -30.491 28.830 1.00 3.00 ATOM 186 CA ASP 47 -13.907 -29.436 29.386 1.00 3.00 ATOM 187 C ASP 47 -13.674 -28.368 28.332 1.00 3.00 ATOM 188 O ASP 47 -13.784 -28.639 27.134 1.00 3.00 ATOM 189 N HIS 48 -13.359 -27.158 28.787 1.00 3.00 ATOM 190 CA HIS 48 -12.824 -26.126 27.913 1.00 3.00 ATOM 191 C HIS 48 -11.454 -26.577 27.413 1.00 3.00 ATOM 192 O HIS 48 -10.625 -27.048 28.194 1.00 3.00 ATOM 193 N HIS 49 -11.246 -26.467 26.104 1.00 3.00 ATOM 194 CA HIS 49 -9.946 -26.699 25.487 1.00 3.00 ATOM 195 C HIS 49 -9.441 -25.392 24.914 1.00 3.00 ATOM 196 O HIS 49 -10.011 -24.859 23.958 1.00 3.00 ATOM 197 N LYS 50 -8.381 -24.866 25.510 1.00 3.00 ATOM 198 CA LYS 50 -7.925 -23.520 25.183 1.00 3.00 ATOM 199 C LYS 50 -6.994 -23.513 23.988 1.00 3.00 ATOM 200 O LYS 50 -6.136 -24.383 23.847 1.00 3.00 ATOM 201 N TRP 51 -7.177 -22.522 23.127 1.00 3.00 ATOM 202 CA TRP 51 -6.278 -22.296 22.012 1.00 3.00 ATOM 203 C TRP 51 -5.862 -20.835 22.026 1.00 3.00 ATOM 204 O TRP 51 -6.540 -19.986 21.446 1.00 3.00 ATOM 205 N VAL 52 -4.744 -20.531 22.699 1.00 3.00 ATOM 206 CA VAL 52 -4.310 -19.152 22.836 1.00 3.00 ATOM 207 C VAL 52 -3.684 -18.639 21.548 1.00 3.00 ATOM 208 O VAL 52 -3.205 -19.424 20.729 1.00 3.00 ATOM 209 N ILE 53 -3.698 -17.324 21.381 1.00 3.00 ATOM 210 CA ILE 53 -3.040 -16.683 20.262 1.00 3.00 ATOM 211 C ILE 53 -1.945 -15.776 20.801 1.00 3.00 ATOM 212 O ILE 53 -2.214 -14.823 21.534 1.00 3.00 ATOM 213 N GLN 54 -0.706 -16.101 20.460 1.00 3.00 ATOM 214 CA GLN 54 0.447 -15.341 20.921 1.00 3.00 ATOM 215 C GLN 54 1.362 -14.989 19.757 1.00 3.00 ATOM 216 O GLN 54 2.555 -15.292 19.790 1.00 3.00 ATOM 217 N GLU 55 0.810 -14.356 18.729 1.00 3.00 ATOM 218 CA GLU 55 1.567 -14.104 17.512 1.00 3.00 ATOM 219 C GLU 55 2.183 -12.724 17.501 1.00 3.00 ATOM 220 O GLU 55 1.518 -11.731 17.788 1.00 3.00 ATOM 221 N GLU 56 3.462 -12.673 17.159 1.00 3.00 ATOM 222 CA GLU 56 4.129 -11.414 16.855 1.00 3.00 ATOM 223 C GLU 56 4.885 -10.956 15.587 1.00 3.00 ATOM 224 O GLU 56 5.467 -11.760 14.842 1.00 3.00 ATOM 225 N ILE 57 4.994 -9.637 15.452 1.00 3.00 ATOM 226 CA ILE 57 5.625 -9.006 14.300 1.00 3.00 ATOM 227 C ILE 57 7.103 -8.626 14.391 1.00 3.00 ATOM 228 O ILE 57 7.583 -8.196 15.440 1.00 3.00 ATOM 229 N LYS 58 7.777 -8.674 13.232 1.00 3.00 ATOM 230 CA LYS 58 9.189 -8.346 13.072 1.00 3.00 ATOM 231 C LYS 58 9.458 -6.949 13.557 1.00 3.00 ATOM 232 O LYS 58 8.528 -6.139 13.717 1.00 3.00 ATOM 233 N ASP 59 10.759 -6.643 13.672 1.00 9.00 ATOM 234 CA ASP 59 11.095 -5.323 14.131 1.00 9.00 ATOM 235 C ASP 59 10.668 -4.292 13.105 1.00 9.00 ATOM 236 O ASP 59 10.084 -3.263 13.460 1.00 9.00 ATOM 237 N ALA 60 10.845 -4.603 11.831 1.00 9.00 ATOM 238 CA ALA 60 10.438 -3.632 10.840 1.00 9.00 ATOM 239 C ALA 60 9.376 -4.144 9.887 1.00 9.00 ATOM 240 O ALA 60 9.134 -3.549 8.841 1.00 9.00 ATOM 241 N GLY 61 8.707 -5.230 10.284 1.00 3.00 ATOM 242 CA GLY 61 7.700 -5.855 9.445 1.00 3.00 ATOM 243 C GLY 61 8.342 -6.399 8.175 1.00 3.00 ATOM 244 O GLY 61 7.699 -6.462 7.145 1.00 3.00 ATOM 245 N ASP 62 9.605 -6.814 8.279 1.00 3.00 ATOM 246 CA ASP 62 10.337 -7.393 7.153 1.00 3.00 ATOM 247 C ASP 62 9.549 -8.565 6.601 1.00 3.00 ATOM 248 O ASP 62 9.507 -8.772 5.391 1.00 3.00 ATOM 249 N LYS 63 9.115 -9.426 7.515 1.00 3.00 ATOM 250 CA LYS 63 8.254 -10.581 7.275 1.00 3.00 ATOM 251 C LYS 63 7.137 -10.118 6.336 1.00 3.00 ATOM 252 O LYS 63 6.627 -10.891 5.526 1.00 3.00 ATOM 253 N THR 64 6.767 -8.849 6.455 1.00 3.00 ATOM 254 CA THR 64 5.682 -8.296 5.659 1.00 3.00 ATOM 255 C THR 64 6.210 -7.794 4.316 1.00 3.00 ATOM 256 O THR 64 6.609 -6.634 4.182 1.00 3.00 ATOM 257 N LEU 65 6.202 -8.683 3.325 1.00 3.00 ATOM 258 CA LEU 65 6.815 -8.408 2.026 1.00 3.00 ATOM 259 C LEU 65 5.961 -7.512 1.126 1.00 3.00 ATOM 260 O LEU 65 6.457 -6.966 0.141 1.00 3.00 ATOM 261 N GLN 66 4.679 -7.379 1.469 1.00 3.00 ATOM 262 CA GLN 66 3.749 -6.463 0.797 1.00 3.00 ATOM 263 C GLN 66 2.606 -6.130 1.754 1.00 3.00 ATOM 264 O GLN 66 2.343 -6.897 2.677 1.00 3.00 ATOM 265 N PRO 67 1.913 -4.993 1.539 1.00 3.00 ATOM 266 CA PRO 67 0.816 -4.623 2.446 1.00 3.00 ATOM 267 C PRO 67 -0.164 -5.763 2.718 1.00 3.00 ATOM 268 O PRO 67 -0.603 -6.443 1.783 1.00 3.00 ATOM 269 N GLY 68 -0.475 -5.963 3.997 1.00 3.00 ATOM 270 CA GLY 68 -1.473 -6.934 4.440 1.00 3.00 ATOM 271 C GLY 68 -2.856 -6.340 4.296 1.00 3.00 ATOM 272 O GLY 68 -3.104 -5.204 4.709 1.00 3.00 ATOM 273 N ASP 69 -3.763 -7.138 3.747 1.00 3.00 ATOM 274 CA ASP 69 -5.098 -6.679 3.394 1.00 3.00 ATOM 275 C ASP 69 -6.214 -7.438 4.113 1.00 3.00 ATOM 276 O ASP 69 -7.311 -6.908 4.294 1.00 3.00 ATOM 277 N GLN 70 -5.924 -8.663 4.541 1.00 3.00 ATOM 278 CA GLN 70 -6.880 -9.434 5.328 1.00 3.00 ATOM 279 C GLN 70 -6.186 -10.476 6.189 1.00 3.00 ATOM 280 O GLN 70 -5.020 -10.799 5.981 1.00 3.00 ATOM 281 N VAL 71 -6.917 -10.988 7.166 1.00 3.00 ATOM 282 CA VAL 71 -6.437 -12.056 8.023 1.00 3.00 ATOM 283 C VAL 71 -7.480 -13.157 7.998 1.00 3.00 ATOM 284 O VAL 71 -8.686 -12.876 8.024 1.00 3.00 ATOM 285 N ILE 72 -7.034 -14.405 7.917 1.00 3.00 ATOM 286 CA ILE 72 -7.958 -15.517 8.060 1.00 3.00 ATOM 287 C ILE 72 -7.395 -16.628 8.925 1.00 3.00 ATOM 288 O ILE 72 -6.182 -16.781 9.060 1.00 3.00 ATOM 289 N LEU 73 -8.302 -17.385 9.525 1.00 3.00 ATOM 290 CA LEU 73 -7.943 -18.495 10.378 1.00 3.00 ATOM 291 C LEU 73 -8.570 -19.770 9.854 1.00 3.00 ATOM 292 O LEU 73 -9.785 -19.858 9.706 1.00 3.00 ATOM 293 N GLU 74 -7.728 -20.752 9.567 1.00 3.00 ATOM 294 CA GLU 74 -8.194 -22.070 9.174 1.00 3.00 ATOM 295 C GLU 74 -8.034 -23.028 10.333 1.00 3.00 ATOM 296 O GLU 74 -7.099 -22.900 11.124 1.00 3.00 ATOM 297 N ALA 75 -8.959 -23.974 10.441 1.00 3.00 ATOM 298 CA ALA 75 -8.890 -25.011 11.461 1.00 3.00 ATOM 299 C ALA 75 -9.711 -26.289 11.571 1.00 3.00 ATOM 300 O ALA 75 -10.937 -26.187 11.439 1.00 3.00 ATOM 301 N SER 76 -9.061 -27.389 11.832 1.00 3.00 ATOM 302 CA SER 76 -9.683 -28.713 11.931 1.00 3.00 ATOM 303 C SER 76 -10.681 -28.862 13.018 1.00 3.00 ATOM 304 O SER 76 -10.488 -28.232 14.073 1.00 3.00 ATOM 305 N HIS 77 -11.719 -29.685 12.760 1.00 3.00 ATOM 306 CA HIS 77 -12.712 -29.925 13.793 1.00 3.00 ATOM 307 C HIS 77 -13.687 -30.981 13.304 1.00 3.00 ATOM 308 O HIS 77 -13.803 -31.169 12.069 1.00 3.00 ATOM 309 N MET 78 -14.298 -31.568 14.311 1.00 3.00 ATOM 310 CA MET 78 -15.365 -32.632 13.966 1.00 3.00 ATOM 311 C MET 78 -16.452 -32.564 14.988 1.00 3.00 ATOM 312 O MET 78 -17.432 -31.845 14.645 1.00 3.00 ATOM 313 N LYS 79 -16.326 -33.002 16.201 1.00 3.00 ATOM 314 CA LYS 79 -17.396 -32.943 17.200 1.00 3.00 ATOM 315 C LYS 79 -17.659 -31.537 17.688 1.00 3.00 ATOM 316 O LYS 79 -18.864 -31.389 17.942 1.00 3.00 ATOM 317 N GLY 80 -16.660 -30.654 17.796 1.00 3.00 ATOM 318 CA GLY 80 -16.937 -29.293 18.332 1.00 3.00 ATOM 319 C GLY 80 -17.652 -27.954 18.362 1.00 3.00 ATOM 320 O GLY 80 -18.171 -27.481 17.347 1.00 3.00 ATOM 321 N MET 81 -17.109 -23.894 19.460 1.00 3.00 ATOM 322 CA MET 81 -16.035 -22.917 19.641 1.00 3.00 ATOM 323 C MET 81 -16.545 -21.554 20.085 1.00 3.00 ATOM 324 O MET 81 -17.608 -21.106 19.654 1.00 3.00 ATOM 325 N LYS 82 -15.764 -20.897 20.938 1.00 3.00 ATOM 326 CA LYS 82 -16.117 -19.599 21.498 1.00 3.00 ATOM 327 C LYS 82 -14.848 -18.794 21.679 1.00 3.00 ATOM 328 O LYS 82 -13.812 -19.345 22.035 1.00 3.00 ATOM 329 N GLY 83 -14.915 -17.493 21.416 1.00 3.00 ATOM 330 CA GLY 83 -13.786 -16.617 21.705 1.00 3.00 ATOM 331 C GLY 83 -13.567 -15.494 20.718 1.00 3.00 ATOM 332 O GLY 83 -14.038 -15.545 19.580 1.00 3.00 ATOM 333 N ALA 84 -10.482 -12.595 19.159 1.00 3.00 ATOM 334 CA ALA 84 -9.077 -12.299 18.950 1.00 3.00 ATOM 335 C ALA 84 -8.902 -10.802 18.834 1.00 3.00 ATOM 336 O ALA 84 -9.832 -10.086 18.464 1.00 3.00 ATOM 337 N THR 85 -7.705 -10.329 19.149 1.00 3.00 ATOM 338 CA THR 85 -7.370 -8.930 18.948 1.00 3.00 ATOM 339 C THR 85 -6.132 -8.823 18.075 1.00 3.00 ATOM 340 O THR 85 -5.098 -9.426 18.374 1.00 3.00 ATOM 341 N ALA 86 -6.250 -8.075 16.985 1.00 3.00 ATOM 342 CA ALA 86 -5.125 -7.831 16.103 1.00 3.00 ATOM 343 C ALA 86 -4.662 -6.407 16.349 1.00 3.00 ATOM 344 O ALA 86 -5.391 -5.448 16.071 1.00 3.00 ATOM 345 N GLU 87 -3.466 -6.267 16.907 1.00 3.00 ATOM 346 CA GLU 87 -2.910 -4.953 17.186 1.00 3.00 ATOM 347 C GLU 87 -1.880 -4.665 16.122 1.00 3.00 ATOM 348 O GLU 87 -0.876 -5.376 16.030 1.00 3.00 ATOM 349 N ILE 88 -2.108 -3.650 15.299 1.00 3.00 ATOM 350 CA ILE 88 -1.025 -3.250 14.417 1.00 3.00 ATOM 351 C ILE 88 -0.380 -1.995 14.988 1.00 3.00 ATOM 352 O ILE 88 -1.032 -0.973 15.218 1.00 3.00 ATOM 353 N ASP 89 0.905 -2.133 15.283 1.00 3.00 ATOM 354 CA ASP 89 1.642 -1.147 16.043 1.00 3.00 ATOM 355 C ASP 89 1.765 0.161 15.279 1.00 3.00 ATOM 356 O ASP 89 2.103 0.178 14.094 1.00 3.00 ATOM 357 N SER 90 1.450 1.252 15.967 1.00 3.00 ATOM 358 CA SER 90 1.415 2.579 15.356 1.00 3.00 ATOM 359 C SER 90 1.736 2.640 13.856 1.00 3.00 ATOM 360 O SER 90 2.903 2.836 13.460 1.00 3.00 ATOM 361 N ALA 91 0.677 2.461 13.077 1.00 3.00 ATOM 362 CA ALA 91 0.744 2.472 11.599 1.00 3.00 ATOM 363 C ALA 91 -0.184 3.554 11.020 1.00 3.00 ATOM 364 O ALA 91 -1.235 3.868 11.597 1.00 3.00 ATOM 365 N GLU 92 0.247 4.098 9.886 1.00 3.00 ATOM 366 CA GLU 92 -0.508 5.148 9.157 1.00 3.00 ATOM 367 C GLU 92 -1.843 4.583 8.688 1.00 3.00 ATOM 368 O GLU 92 -1.891 3.583 7.948 1.00 3.00 ATOM 369 N LYS 93 -2.919 5.212 9.132 1.00 9.00 ATOM 370 CA LYS 93 -4.281 4.752 8.805 1.00 9.00 ATOM 371 C LYS 93 -5.074 5.761 7.959 1.00 9.00 ATOM 372 O LYS 93 -6.277 5.567 7.704 1.00 9.00 ATOM 373 N THR 94 -4.436 6.833 7.509 1.00 3.00 ATOM 374 CA THR 94 -5.136 7.808 6.662 1.00 3.00 ATOM 375 C THR 94 -5.299 7.193 5.268 1.00 3.00 ATOM 376 O THR 94 -4.379 6.539 4.755 1.00 3.00 ATOM 377 N THR 95 -6.450 7.428 4.692 1.00 3.00 ATOM 378 CA THR 95 -6.792 6.885 3.365 1.00 3.00 ATOM 379 C THR 95 -5.707 7.205 2.326 1.00 3.00 ATOM 380 O THR 95 -5.371 8.376 2.100 1.00 3.00 ATOM 381 N VAL 96 -5.210 6.125 1.730 1.00 3.00 ATOM 382 CA VAL 96 -4.183 6.185 0.676 1.00 3.00 ATOM 383 C VAL 96 -4.474 6.924 -0.626 1.00 3.00 ATOM 384 O VAL 96 -5.591 7.381 -0.844 1.00 3.00 ATOM 385 N TYR 97 -3.459 7.067 -1.465 1.00 3.00 ATOM 386 CA TYR 97 -3.660 7.613 -2.795 1.00 3.00 ATOM 387 C TYR 97 -3.411 6.524 -3.821 1.00 3.00 ATOM 388 O TYR 97 -2.330 5.944 -3.875 1.00 3.00 ATOM 389 N MET 98 -4.427 6.250 -4.624 1.00 3.00 ATOM 390 CA MET 98 -4.325 5.248 -5.660 1.00 3.00 ATOM 391 C MET 98 -4.123 5.915 -7.000 1.00 3.00 ATOM 392 O MET 98 -4.859 6.833 -7.361 1.00 3.00 ATOM 393 N VAL 99 -3.111 5.455 -7.725 1.00 3.00 ATOM 394 CA VAL 99 -2.872 5.901 -9.082 1.00 3.00 ATOM 395 C VAL 99 -2.995 4.680 -9.978 1.00 3.00 ATOM 396 O VAL 99 -2.151 3.787 -9.943 1.00 3.00 ATOM 397 N ASP 100 -4.070 4.643 -10.760 1.00 3.00 ATOM 398 CA ASP 100 -4.333 3.533 -11.654 1.00 3.00 ATOM 399 C ASP 100 -4.061 3.960 -13.080 1.00 3.00 ATOM 400 O ASP 100 -4.409 5.067 -13.479 1.00 3.00 ATOM 401 N TYR 101 -3.430 3.082 -13.846 1.00 3.00 ATOM 402 CA TYR 101 -3.214 3.350 -15.251 1.00 3.00 ATOM 403 C TYR 101 -3.791 2.227 -16.089 1.00 3.00 ATOM 404 O TYR 101 -3.943 1.098 -15.613 1.00 3.00 ATOM 405 N THR 102 -4.114 2.564 -17.334 1.00 3.00 ATOM 406 CA THR 102 -4.499 1.588 -18.340 1.00 3.00 ATOM 407 C THR 102 -4.269 2.157 -19.732 1.00 3.00 ATOM 408 O THR 102 -3.972 3.341 -19.880 1.00 3.00 ATOM 409 N SER 103 -4.396 1.295 -20.739 1.00 3.00 ATOM 410 CA SER 103 -4.168 1.650 -22.145 1.00 3.00 ATOM 411 C SER 103 -2.741 2.138 -22.388 1.00 3.00 ATOM 412 O SER 103 -2.471 2.853 -23.353 1.00 3.00 ATOM 413 N THR 104 -1.836 1.722 -21.508 1.00 3.00 ATOM 414 CA THR 104 -0.422 2.042 -21.617 1.00 3.00 ATOM 415 C THR 104 0.238 0.995 -22.511 1.00 3.00 ATOM 416 O THR 104 0.055 -0.208 -22.309 1.00 3.00 ATOM 417 N THR 105 0.989 1.460 -23.505 1.00 3.00 ATOM 418 CA THR 105 1.642 0.586 -24.478 1.00 3.00 ATOM 419 C THR 105 2.561 -0.421 -23.806 1.00 3.00 ATOM 420 O THR 105 3.439 -0.051 -23.025 1.00 3.00 ATOM 421 N SER 106 2.339 -1.696 -24.113 1.00 3.00 ATOM 422 CA SER 106 3.101 -2.793 -23.519 1.00 3.00 ATOM 423 C SER 106 4.589 -2.609 -23.786 1.00 3.00 ATOM 424 O SER 106 4.994 -2.312 -24.909 1.00 3.00 ATOM 425 N GLY 107 5.393 -2.761 -22.739 1.00 3.00 ATOM 426 CA GLY 107 6.839 -2.611 -22.865 1.00 3.00 ATOM 427 C GLY 107 7.323 -1.188 -22.659 1.00 3.00 ATOM 428 O GLY 107 8.510 -0.899 -22.829 1.00 3.00 ATOM 429 N GLU 108 6.401 -0.295 -22.310 1.00 3.00 ATOM 430 CA GLU 108 6.771 1.038 -21.874 1.00 3.00 ATOM 431 C GLU 108 7.336 2.352 -21.504 1.00 3.00 ATOM 432 O GLU 108 8.163 2.899 -22.260 1.00 3.00 ATOM 433 N LYS 109 6.880 2.838 -20.335 1.00 3.00 ATOM 434 CA LYS 109 7.308 4.119 -19.813 1.00 3.00 ATOM 435 C LYS 109 8.052 3.917 -18.513 1.00 3.00 ATOM 436 O LYS 109 7.950 2.847 -17.942 1.00 3.00 ATOM 437 N VAL 110 8.785 4.970 -18.051 1.00 3.00 ATOM 438 CA VAL 110 9.543 4.959 -16.788 1.00 3.00 ATOM 439 C VAL 110 9.892 6.320 -16.198 1.00 3.00 ATOM 440 O VAL 110 9.847 7.287 -16.911 1.00 3.00 ATOM 441 N LYS 111 10.193 6.357 -14.912 1.00 9.00 ATOM 442 CA LYS 111 10.587 7.566 -14.195 1.00 9.00 ATOM 443 C LYS 111 9.488 8.530 -13.918 1.00 9.00 ATOM 444 O LYS 111 9.683 9.747 -13.767 1.00 9.00 ATOM 445 N ASN 112 8.305 7.972 -13.853 1.00 3.00 ATOM 446 CA ASN 112 7.137 8.808 -13.623 1.00 3.00 ATOM 447 C ASN 112 6.870 8.929 -12.169 1.00 3.00 ATOM 448 O ASN 112 6.225 9.864 -11.692 1.00 3.00 ATOM 449 N HIS 113 7.367 7.920 -11.505 1.00 3.00 ATOM 450 CA HIS 113 7.198 7.811 -10.102 1.00 3.00 ATOM 451 C HIS 113 7.824 9.000 -9.346 1.00 3.00 ATOM 452 O HIS 113 7.212 9.624 -8.472 1.00 3.00 ATOM 453 N LYS 114 9.076 9.315 -9.684 1.00 3.00 ATOM 454 CA LYS 114 9.777 10.395 -9.044 1.00 3.00 ATOM 455 C LYS 114 9.101 11.194 -7.953 1.00 3.00 ATOM 456 O LYS 114 8.035 11.768 -8.165 1.00 3.00 ATOM 457 N TRP 115 9.703 11.214 -6.775 1.00 3.00 ATOM 458 CA TRP 115 9.116 11.931 -5.662 1.00 3.00 ATOM 459 C TRP 115 10.138 12.528 -4.727 1.00 3.00 ATOM 460 O TRP 115 11.322 12.204 -4.797 1.00 3.00 ATOM 461 N VAL 116 9.675 13.423 -3.866 1.00 3.00 ATOM 462 CA VAL 116 10.497 13.937 -2.787 1.00 3.00 ATOM 463 C VAL 116 9.679 13.853 -1.506 1.00 3.00 ATOM 464 O VAL 116 8.511 14.230 -1.480 1.00 3.00 ATOM 465 N THR 117 10.294 13.329 -0.456 1.00 3.00 ATOM 466 CA THR 117 9.667 13.256 0.851 1.00 3.00 ATOM 467 C THR 117 10.494 14.071 1.810 1.00 3.00 ATOM 468 O THR 117 11.717 13.983 1.803 1.00 3.00 ATOM 469 N GLU 118 9.824 14.867 2.632 1.00 3.00 ATOM 470 CA GLU 118 10.504 15.739 3.581 1.00 3.00 ATOM 471 C GLU 118 10.186 15.356 5.013 1.00 3.00 ATOM 472 O GLU 118 9.030 15.089 5.352 1.00 3.00 ATOM 473 N ASP 119 11.214 15.333 5.854 1.00 3.00 ATOM 474 CA ASP 119 11.071 14.824 7.208 1.00 3.00 ATOM 475 C ASP 119 11.701 15.698 8.270 1.00 3.00 ATOM 476 O ASP 119 12.704 16.373 8.030 1.00 3.00 ATOM 477 N GLU 120 11.098 15.668 9.452 1.00 3.00 ATOM 478 CA GLU 120 11.776 16.052 10.677 1.00 3.00 ATOM 479 C GLU 120 12.328 14.756 11.259 1.00 3.00 ATOM 480 O GLU 120 11.605 13.769 11.380 1.00 3.00 ATOM 481 N LEU 121 13.611 14.748 11.594 1.00 3.00 ATOM 482 CA LEU 121 14.270 13.515 12.001 1.00 3.00 ATOM 483 C LEU 121 15.122 13.684 13.239 1.00 3.00 ATOM 484 O LEU 121 15.720 14.740 13.447 1.00 3.00 ATOM 485 N SER 122 15.166 12.633 14.055 1.00 3.00 ATOM 486 CA SER 122 16.114 12.542 15.163 1.00 3.00 ATOM 487 C SER 122 17.093 11.417 14.838 1.00 3.00 ATOM 488 O SER 122 16.672 10.284 14.595 1.00 3.00 ATOM 489 N ALA 123 18.399 11.734 14.799 1.00 3.00 ATOM 490 CA ALA 123 19.417 10.753 14.418 1.00 3.00 ATOM 491 C ALA 123 19.540 9.621 15.425 1.00 3.00 ATOM 492 O ALA 123 19.248 9.814 16.608 1.00 3.00 TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 492 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 79.65 43.4 244 99.2 246 ARMSMC SECONDARY STRUCTURE . . 63.67 50.4 129 99.2 130 ARMSMC SURFACE . . . . . . . . 86.48 40.0 150 98.7 152 ARMSMC BURIED . . . . . . . . 67.33 48.9 94 100.0 94 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 103 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 91 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 58 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 65 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 38 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 68 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 57 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 34 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 34 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 29 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 12 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 14 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 5 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 20.84 (Number of atoms: 123) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 20.84 123 99.2 124 CRMSCA CRN = ALL/NP . . . . . 0.1695 CRMSCA SECONDARY STRUCTURE . . 19.65 65 100.0 65 CRMSCA SURFACE . . . . . . . . 21.84 76 98.7 77 CRMSCA BURIED . . . . . . . . 19.12 47 100.0 47 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 20.88 492 80.8 609 CRMSMC SECONDARY STRUCTURE . . 19.72 260 80.2 324 CRMSMC SURFACE . . . . . . . . 21.88 304 80.6 377 CRMSMC BURIED . . . . . . . . 19.15 188 81.0 232 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 1381 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 1315 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 774 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 844 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 537 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 20.88 492 26.2 1877 CRMSALL SECONDARY STRUCTURE . . 19.72 260 25.1 1034 CRMSALL SURFACE . . . . . . . . 21.88 304 26.4 1152 CRMSALL BURIED . . . . . . . . 19.15 188 25.9 725 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 16.180 0.682 0.341 123 99.2 124 ERRCA SECONDARY STRUCTURE . . 15.158 0.675 0.338 65 100.0 65 ERRCA SURFACE . . . . . . . . 17.291 0.697 0.348 76 98.7 77 ERRCA BURIED . . . . . . . . 14.383 0.657 0.329 47 100.0 47 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 16.207 0.682 0.341 492 80.8 609 ERRMC SECONDARY STRUCTURE . . 15.204 0.675 0.338 260 80.2 324 ERRMC SURFACE . . . . . . . . 17.335 0.698 0.349 304 80.6 377 ERRMC BURIED . . . . . . . . 14.384 0.656 0.328 188 81.0 232 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 1381 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 1315 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 774 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 844 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 537 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 16.207 0.682 0.341 492 26.2 1877 ERRALL SECONDARY STRUCTURE . . 15.204 0.675 0.338 260 25.1 1034 ERRALL SURFACE . . . . . . . . 17.335 0.698 0.349 304 26.4 1152 ERRALL BURIED . . . . . . . . 14.384 0.656 0.328 188 25.9 725 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 14 123 124 DISTCA CA (P) 0.00 0.00 0.00 0.81 11.29 124 DISTCA CA (RMS) 0.00 0.00 0.00 3.31 8.09 DISTCA ALL (N) 0 0 0 5 52 492 1877 DISTALL ALL (P) 0.00 0.00 0.00 0.27 2.77 1877 DISTALL ALL (RMS) 0.00 0.00 0.00 3.78 7.86 DISTALL END of the results output