####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 322), selected 44 , name T0579TS311_1-D1 # Molecule2: number of CA atoms 60 ( 911), selected 44 , name T0579-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0579TS311_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 10 - 29 4.76 12.31 LCS_AVERAGE: 29.81 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 14 - 22 1.76 16.65 LCS_AVERAGE: 9.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 14 - 20 0.73 16.09 LCS_AVERAGE: 7.88 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 4 4 18 0 4 4 4 4 4 4 4 4 6 8 15 16 18 18 18 19 23 24 27 LCS_GDT K 2 K 2 4 4 18 3 4 4 4 5 5 6 8 9 11 13 15 17 18 18 20 21 23 27 30 LCS_GDT V 3 V 3 4 4 18 3 4 4 4 5 5 6 8 9 11 13 15 17 18 18 20 21 23 26 30 LCS_GDT G 4 G 4 4 4 18 3 4 4 4 5 5 5 6 7 9 11 13 17 18 18 20 21 23 26 30 LCS_GDT S 5 S 5 4 4 18 3 3 4 4 5 5 5 6 8 10 13 15 17 18 18 20 21 23 26 30 LCS_GDT Q 6 Q 6 4 4 18 3 3 4 4 5 5 6 8 9 11 13 15 17 18 18 20 21 23 27 30 LCS_GDT V 7 V 7 3 3 18 3 3 3 3 5 5 6 8 9 11 13 15 17 18 18 20 23 27 29 32 LCS_GDT I 8 I 8 3 3 18 1 3 3 3 4 5 6 6 8 10 13 15 17 18 18 20 21 25 28 30 LCS_GDT I 9 I 9 4 4 18 3 3 4 4 5 6 6 8 9 11 13 15 17 18 18 22 23 27 31 32 LCS_GDT N 10 N 10 4 4 20 3 3 4 4 5 6 7 8 9 11 13 16 18 21 22 24 25 28 31 32 LCS_GDT T 11 T 11 4 4 20 3 3 4 4 5 6 9 10 12 13 18 19 21 23 24 24 27 28 31 32 LCS_GDT S 12 S 12 4 4 20 3 3 4 4 5 7 9 11 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT H 13 H 13 3 6 20 3 3 4 5 7 9 10 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT M 14 M 14 7 9 20 4 6 7 7 8 9 9 9 11 14 17 18 20 21 24 24 25 26 29 31 LCS_GDT K 15 K 15 7 9 20 4 6 7 7 8 9 9 11 13 15 18 19 20 23 24 24 26 28 31 31 LCS_GDT G 16 G 16 7 9 20 4 6 7 7 8 9 10 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT M 17 M 17 7 9 20 4 6 7 7 8 9 10 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT K 18 K 18 7 9 20 4 6 7 7 8 9 10 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT G 19 G 19 7 9 20 3 4 7 7 9 9 11 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT A 20 A 20 7 9 20 3 6 7 8 9 9 11 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT E 21 E 21 6 9 20 4 5 7 8 9 9 11 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT A 22 A 22 6 9 20 4 5 7 8 9 9 11 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT T 23 T 23 6 8 20 4 5 7 8 9 9 11 11 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT V 24 V 24 6 8 20 4 5 7 8 9 9 11 11 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT T 25 T 25 6 8 20 3 5 7 8 9 9 11 11 14 15 17 19 20 23 24 24 27 28 31 32 LCS_GDT G 26 G 26 6 8 20 3 5 7 8 9 9 11 11 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT A 27 A 27 5 6 20 3 5 5 5 7 9 10 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT Y 28 Y 28 5 6 20 3 5 5 5 7 9 10 12 15 15 18 19 21 23 24 24 27 28 31 31 LCS_GDT D 29 D 29 5 6 20 3 5 5 5 5 7 7 12 13 14 18 19 21 23 24 24 26 28 31 31 LCS_GDT T 94 T 94 3 6 15 3 3 7 7 7 8 9 10 11 12 14 17 18 21 22 24 25 27 29 32 LCS_GDT T 95 T 95 4 6 15 3 4 5 5 7 7 9 10 11 12 14 16 18 20 22 24 25 26 29 32 LCS_GDT V 96 V 96 4 6 15 3 4 5 5 6 7 7 8 11 12 14 16 18 21 22 24 27 28 31 32 LCS_GDT Y 97 Y 97 4 6 15 3 4 5 5 6 7 7 8 12 13 14 16 18 21 22 24 27 28 31 32 LCS_GDT M 98 M 98 4 6 15 3 4 5 5 6 7 7 8 9 11 14 16 18 21 22 23 27 28 31 32 LCS_GDT V 99 V 99 3 6 15 3 3 3 4 6 7 9 10 12 13 14 16 18 21 22 24 27 28 31 32 LCS_GDT D 100 D 100 3 3 15 1 3 3 3 8 8 9 10 12 13 14 16 18 21 22 24 27 28 31 32 LCS_GDT Y 101 Y 101 3 3 15 0 3 3 4 4 5 7 8 9 13 15 17 21 23 24 24 27 28 31 32 LCS_GDT T 102 T 102 3 3 15 3 3 3 4 5 9 11 12 15 15 18 19 21 23 24 24 27 28 31 32 LCS_GDT S 103 S 103 5 5 15 4 4 5 5 5 7 11 11 12 15 17 19 21 23 24 24 27 28 31 32 LCS_GDT T 104 T 104 5 5 15 4 4 5 5 5 5 7 7 9 12 14 17 18 20 22 23 24 26 27 31 LCS_GDT T 105 T 105 5 5 15 4 4 5 5 8 8 9 10 10 12 13 17 18 20 22 23 24 26 29 32 LCS_GDT S 106 S 106 5 5 15 4 4 7 8 9 9 11 11 14 15 17 19 21 23 24 24 27 28 31 32 LCS_GDT G 107 G 107 5 5 15 3 4 5 5 5 5 7 9 12 15 17 19 21 23 24 24 27 28 31 32 LCS_GDT E 108 E 108 3 3 15 3 3 3 3 3 7 7 9 10 12 14 17 18 22 23 24 27 28 31 32 LCS_AVERAGE LCS_A: 15.80 ( 7.88 9.70 29.81 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 8 9 9 11 12 15 15 18 19 21 23 24 24 27 28 31 32 GDT PERCENT_AT 6.67 10.00 11.67 13.33 15.00 15.00 18.33 20.00 25.00 25.00 30.00 31.67 35.00 38.33 40.00 40.00 45.00 46.67 51.67 53.33 GDT RMS_LOCAL 0.13 0.47 0.73 1.35 1.55 1.55 2.27 2.75 3.35 3.35 3.92 4.12 4.59 4.87 5.02 5.02 6.20 6.27 6.76 7.38 GDT RMS_ALL_AT 12.81 15.58 16.09 11.46 11.52 11.52 11.68 12.61 12.28 12.28 12.35 12.34 11.92 12.00 12.17 12.17 11.27 11.46 11.25 10.36 # Checking swapping # possible swapping detected: Y 97 Y 97 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 27.119 0 0.184 0.440 29.300 0.000 0.000 LGA K 2 K 2 25.459 0 0.127 1.267 26.060 0.000 0.000 LGA V 3 V 3 24.652 0 0.101 0.109 25.294 0.000 0.000 LGA G 4 G 4 23.890 0 0.497 0.497 24.882 0.000 0.000 LGA S 5 S 5 24.027 0 0.612 0.979 25.448 0.000 0.000 LGA Q 6 Q 6 20.320 0 0.576 1.282 22.000 0.000 0.000 LGA V 7 V 7 16.860 0 0.572 0.545 18.224 0.000 0.000 LGA I 8 I 8 17.925 0 0.604 1.236 24.336 0.000 0.000 LGA I 9 I 9 13.512 0 0.601 1.444 15.239 0.000 0.000 LGA N 10 N 10 11.695 0 0.060 1.280 14.358 0.833 0.417 LGA T 11 T 11 6.866 0 0.641 0.615 8.852 19.881 18.163 LGA S 12 S 12 4.988 0 0.618 0.760 7.838 43.690 31.984 LGA H 13 H 13 1.381 0 0.421 0.850 8.197 62.857 41.429 LGA M 14 M 14 5.699 0 0.620 1.264 13.790 33.333 17.619 LGA K 15 K 15 4.511 0 0.101 1.483 13.140 39.524 23.280 LGA G 16 G 16 2.855 0 0.187 0.187 3.510 59.524 59.524 LGA M 17 M 17 1.337 0 0.120 0.892 5.327 77.143 66.131 LGA K 18 K 18 2.305 0 0.231 1.240 8.271 73.095 47.407 LGA G 19 G 19 2.498 0 0.260 0.260 3.175 61.190 61.190 LGA A 20 A 20 2.152 0 0.613 0.564 4.166 57.857 62.571 LGA E 21 E 21 2.847 0 0.332 0.698 5.938 57.262 40.529 LGA A 22 A 22 2.885 0 0.064 0.073 6.003 40.714 44.000 LGA T 23 T 23 6.827 0 0.101 1.043 9.887 20.714 12.993 LGA V 24 V 24 6.524 0 0.168 0.173 9.724 7.738 7.483 LGA T 25 T 25 8.460 0 0.668 1.411 9.414 8.095 5.918 LGA G 26 G 26 6.707 0 0.054 0.054 7.343 17.738 17.738 LGA A 27 A 27 3.137 0 0.153 0.173 4.271 46.905 48.952 LGA Y 28 Y 28 2.511 0 0.118 0.292 7.504 53.690 35.754 LGA D 29 D 29 4.108 0 0.492 0.379 5.015 43.690 38.333 LGA T 94 T 94 18.872 0 0.072 1.099 18.872 0.000 0.000 LGA T 95 T 95 18.090 0 0.243 1.050 21.961 0.000 0.000 LGA V 96 V 96 13.618 0 0.069 0.153 15.607 0.000 0.000 LGA Y 97 Y 97 12.940 0 0.632 0.670 19.826 0.000 0.000 LGA M 98 M 98 10.768 0 0.644 0.635 16.118 0.000 0.000 LGA V 99 V 99 11.030 0 0.559 1.334 14.536 0.000 0.068 LGA D 100 D 100 8.872 0 0.595 0.847 9.851 2.143 3.452 LGA Y 101 Y 101 6.406 0 0.564 1.427 10.333 19.405 10.595 LGA T 102 T 102 3.623 0 0.615 1.291 7.216 27.976 44.966 LGA S 103 S 103 7.568 0 0.565 0.851 8.913 8.571 7.857 LGA T 104 T 104 12.293 0 0.099 1.237 16.688 0.000 0.000 LGA T 105 T 105 13.701 0 0.081 0.093 16.022 0.000 0.000 LGA S 106 S 106 9.564 0 0.138 0.715 10.441 1.548 1.984 LGA G 107 G 107 8.589 0 0.225 0.225 9.330 2.143 2.143 LGA E 108 E 108 12.057 0 0.575 1.004 15.675 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 44 176 176 100.00 322 322 100.00 60 SUMMARY(RMSD_GDC): 9.767 9.738 10.458 14.788 12.541 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 60 4.0 12 2.75 20.833 18.513 0.421 LGA_LOCAL RMSD: 2.748 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.612 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.767 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.151563 * X + 0.966144 * Y + -0.208791 * Z + -2.919351 Y_new = -0.965919 * X + -0.099925 * Y + 0.238781 * Z + -14.795440 Z_new = 0.209833 * X + 0.237865 * Y + 0.948362 * Z + -20.492638 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.726438 -0.211404 0.245748 [DEG: -98.9176 -12.1126 14.0803 ] ZXZ: -2.423100 0.322766 0.722866 [DEG: -138.8334 18.4931 41.4171 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0579TS311_1-D1 REMARK 2: T0579-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0579TS311_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 60 4.0 12 2.75 18.513 9.77 REMARK ---------------------------------------------------------- MOLECULE T0579TS311_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0579 REMARK MODEL 1 REMARK PARENT 2rii_B ATOM 1 N MET 1 -9.888 -8.050 10.229 1.00 90.18 N ATOM 2 CA MET 1 -8.680 -7.264 9.896 1.00 90.18 C ATOM 3 CB MET 1 -7.468 -7.779 10.688 1.00 90.18 C ATOM 4 CG MET 1 -7.574 -7.571 12.203 1.00 90.18 C ATOM 5 SD MET 1 -7.431 -5.845 12.753 1.00 90.18 S ATOM 6 CE MET 1 -7.283 -6.257 14.515 1.00 90.18 C ATOM 7 C MET 1 -8.353 -7.380 8.449 1.00 90.18 C ATOM 8 O MET 1 -7.884 -8.420 7.987 1.00 90.18 O ATOM 9 N LYS 2 -8.620 -6.311 7.682 1.00118.27 N ATOM 10 CA LYS 2 -8.248 -6.365 6.307 1.00118.27 C ATOM 11 CB LYS 2 -9.018 -5.378 5.412 1.00118.27 C ATOM 12 CG LYS 2 -8.766 -3.903 5.744 1.00118.27 C ATOM 13 CD LYS 2 -9.278 -2.931 4.675 1.00118.27 C ATOM 14 CE LYS 2 -10.509 -2.126 5.103 1.00118.27 C ATOM 15 NZ LYS 2 -10.122 -1.083 6.082 1.00118.27 N ATOM 16 C LYS 2 -6.812 -5.983 6.272 1.00118.27 C ATOM 17 O LYS 2 -6.430 -4.921 6.764 1.00118.27 O ATOM 18 N VAL 3 -5.963 -6.853 5.706 1.00 43.68 N ATOM 19 CA VAL 3 -4.583 -6.500 5.623 1.00 43.68 C ATOM 20 CB VAL 3 -3.704 -7.693 5.424 1.00 43.68 C ATOM 21 CG1 VAL 3 -2.264 -7.212 5.192 1.00 43.68 C ATOM 22 CG2 VAL 3 -3.867 -8.620 6.641 1.00 43.68 C ATOM 23 C VAL 3 -4.479 -5.637 4.416 1.00 43.68 C ATOM 24 O VAL 3 -4.962 -6.007 3.347 1.00 43.68 O ATOM 25 N GLY 4 -3.839 -4.460 4.538 1.00 45.61 N ATOM 26 CA GLY 4 -3.825 -3.622 3.376 1.00 45.61 C ATOM 27 C GLY 4 -2.506 -3.779 2.703 1.00 45.61 C ATOM 28 O GLY 4 -1.546 -3.074 3.007 1.00 45.61 O ATOM 29 N SER 5 -2.431 -4.717 1.747 1.00 81.43 N ATOM 30 CA SER 5 -1.196 -4.900 1.056 1.00 81.43 C ATOM 31 CB SER 5 -1.153 -6.202 0.239 1.00 81.43 C ATOM 32 OG SER 5 0.104 -6.331 -0.404 1.00 81.43 O ATOM 33 C SER 5 -1.005 -3.748 0.118 1.00 81.43 C ATOM 34 O SER 5 0.120 -3.326 -0.136 1.00 81.43 O ATOM 35 N GLN 6 -2.116 -3.203 -0.426 1.00107.81 N ATOM 36 CA GLN 6 -2.030 -2.165 -1.418 1.00107.81 C ATOM 37 CB GLN 6 -3.406 -1.721 -1.949 1.00107.81 C ATOM 38 CG GLN 6 -4.010 -2.622 -3.021 1.00107.81 C ATOM 39 CD GLN 6 -3.559 -2.053 -4.359 1.00107.81 C ATOM 40 OE1 GLN 6 -4.295 -2.105 -5.341 1.00107.81 O ATOM 41 NE2 GLN 6 -2.332 -1.471 -4.400 1.00107.81 N ATOM 42 C GLN 6 -1.417 -0.913 -0.882 1.00107.81 C ATOM 43 O GLN 6 -0.443 -0.409 -1.438 1.00107.81 O ATOM 44 N VAL 7 -1.940 -0.387 0.240 1.00105.81 N ATOM 45 CA VAL 7 -1.454 0.885 0.686 1.00105.81 C ATOM 46 CB VAL 7 -2.173 1.400 1.907 1.00105.81 C ATOM 47 CG1 VAL 7 -3.630 1.692 1.515 1.00105.81 C ATOM 48 CG2 VAL 7 -2.049 0.388 3.062 1.00105.81 C ATOM 49 C VAL 7 -0.009 0.755 1.016 1.00105.81 C ATOM 50 O VAL 7 0.816 1.576 0.617 1.00105.81 O ATOM 51 N ILE 8 0.329 -0.325 1.732 1.00107.02 N ATOM 52 CA ILE 8 1.667 -0.546 2.168 1.00107.02 C ATOM 53 CB ILE 8 1.789 -1.744 3.061 1.00107.02 C ATOM 54 CG2 ILE 8 0.950 -1.472 4.318 1.00107.02 C ATOM 55 CG1 ILE 8 1.384 -3.031 2.328 1.00107.02 C ATOM 56 CD1 ILE 8 1.688 -4.298 3.127 1.00107.02 C ATOM 57 C ILE 8 2.547 -0.725 0.977 1.00107.02 C ATOM 58 O ILE 8 3.668 -0.222 0.954 1.00107.02 O ATOM 59 N ILE 9 2.069 -1.448 -0.052 1.00 91.07 N ATOM 60 CA ILE 9 2.926 -1.671 -1.179 1.00 91.07 C ATOM 61 CB ILE 9 2.371 -2.621 -2.206 1.00 91.07 C ATOM 62 CG2 ILE 9 1.223 -1.949 -2.971 1.00 91.07 C ATOM 63 CG1 ILE 9 3.506 -3.103 -3.120 1.00 91.07 C ATOM 64 CD1 ILE 9 3.108 -4.299 -3.981 1.00 91.07 C ATOM 65 C ILE 9 3.221 -0.358 -1.836 1.00 91.07 C ATOM 66 O ILE 9 4.366 -0.101 -2.203 1.00 91.07 O ATOM 67 N ASN 10 2.202 0.512 -1.989 1.00 58.92 N ATOM 68 CA ASN 10 2.383 1.783 -2.637 1.00 58.92 C ATOM 69 CB ASN 10 1.098 2.630 -2.667 1.00 58.92 C ATOM 70 CG ASN 10 0.073 1.975 -3.579 1.00 58.92 C ATOM 71 OD1 ASN 10 -0.947 2.584 -3.900 1.00 58.92 O ATOM 72 ND2 ASN 10 0.341 0.711 -4.006 1.00 58.92 N ATOM 73 C ASN 10 3.376 2.582 -1.851 1.00 58.92 C ATOM 74 O ASN 10 4.300 3.172 -2.409 1.00 58.92 O ATOM 75 N THR 11 3.209 2.615 -0.518 1.00 52.12 N ATOM 76 CA THR 11 4.078 3.392 0.316 1.00 52.12 C ATOM 77 CB THR 11 3.691 3.402 1.762 1.00 52.12 C ATOM 78 OG1 THR 11 2.398 3.965 1.926 1.00 52.12 O ATOM 79 CG2 THR 11 4.746 4.210 2.534 1.00 52.12 C ATOM 80 C THR 11 5.454 2.823 0.268 1.00 52.12 C ATOM 81 O THR 11 6.435 3.558 0.371 1.00 52.12 O ATOM 82 N SER 12 5.552 1.487 0.158 1.00 91.44 N ATOM 83 CA SER 12 6.814 0.798 0.169 1.00 91.44 C ATOM 84 CB SER 12 6.666 -0.732 0.205 1.00 91.44 C ATOM 85 OG SER 12 7.950 -1.342 0.207 1.00 91.44 O ATOM 86 C SER 12 7.620 1.128 -1.045 1.00 91.44 C ATOM 87 O SER 12 8.847 1.191 -0.970 1.00 91.44 O ATOM 88 N HIS 13 6.970 1.328 -2.208 1.00144.81 N ATOM 89 CA HIS 13 7.755 1.581 -3.383 1.00144.81 C ATOM 90 ND1 HIS 13 6.948 -1.478 -3.428 1.00144.81 N ATOM 91 CG HIS 13 7.482 -0.725 -4.451 1.00144.81 C ATOM 92 CB HIS 13 7.288 0.755 -4.596 1.00144.81 C ATOM 93 NE2 HIS 13 8.060 -2.887 -4.741 1.00144.81 N ATOM 94 CD2 HIS 13 8.157 -1.602 -5.243 1.00144.81 C ATOM 95 CE1 HIS 13 7.323 -2.763 -3.652 1.00144.81 C ATOM 96 C HIS 13 7.593 3.017 -3.778 1.00144.81 C ATOM 97 O HIS 13 7.418 3.318 -4.958 1.00144.81 O ATOM 98 N MET 14 7.648 3.949 -2.809 1.00156.62 N ATOM 99 CA MET 14 7.553 5.345 -3.138 1.00156.62 C ATOM 100 CB MET 14 7.417 6.294 -1.937 1.00156.62 C ATOM 101 CG MET 14 7.649 7.750 -2.363 1.00156.62 C ATOM 102 SD MET 14 7.095 9.044 -1.210 1.00156.62 S ATOM 103 CE MET 14 5.499 9.311 -2.034 1.00156.62 C ATOM 104 C MET 14 8.787 5.746 -3.878 1.00156.62 C ATOM 105 O MET 14 8.748 6.597 -4.767 1.00156.62 O ATOM 106 N LYS 15 9.917 5.113 -3.516 1.00125.11 N ATOM 107 CA LYS 15 11.209 5.442 -4.040 1.00125.11 C ATOM 108 CB LYS 15 12.281 4.428 -3.589 1.00125.11 C ATOM 109 CG LYS 15 12.499 4.329 -2.075 1.00125.11 C ATOM 110 CD LYS 15 11.324 3.707 -1.311 1.00125.11 C ATOM 111 CE LYS 15 11.594 3.519 0.185 1.00125.11 C ATOM 112 NZ LYS 15 10.355 3.760 0.960 1.00125.11 N ATOM 113 C LYS 15 11.155 5.344 -5.528 1.00125.11 C ATOM 114 O LYS 15 11.564 6.263 -6.238 1.00125.11 O ATOM 115 N GLY 16 10.607 4.229 -6.040 1.00 30.84 N ATOM 116 CA GLY 16 10.566 4.031 -7.455 1.00 30.84 C ATOM 117 C GLY 16 9.744 5.118 -8.054 1.00 30.84 C ATOM 118 O GLY 16 10.046 5.596 -9.146 1.00 30.84 O ATOM 119 N MET 17 8.662 5.515 -7.356 1.00145.77 N ATOM 120 CA MET 17 7.792 6.529 -7.867 1.00145.77 C ATOM 121 CB MET 17 6.578 6.824 -6.976 1.00145.77 C ATOM 122 CG MET 17 5.584 5.669 -6.953 1.00145.77 C ATOM 123 SD MET 17 5.022 5.152 -8.605 1.00145.77 S ATOM 124 CE MET 17 4.122 6.679 -9.002 1.00145.77 C ATOM 125 C MET 17 8.556 7.789 -8.010 1.00145.77 C ATOM 126 O MET 17 8.430 8.474 -9.022 1.00145.77 O ATOM 127 N LYS 18 9.373 8.156 -7.011 1.00247.80 N ATOM 128 CA LYS 18 10.146 9.316 -7.310 1.00247.80 C ATOM 129 CB LYS 18 10.987 9.872 -6.149 1.00247.80 C ATOM 130 CG LYS 18 11.717 11.171 -6.512 1.00247.80 C ATOM 131 CD LYS 18 12.309 11.909 -5.311 1.00247.80 C ATOM 132 CE LYS 18 12.973 13.239 -5.676 1.00247.80 C ATOM 133 NZ LYS 18 14.160 12.998 -6.526 1.00247.80 N ATOM 134 C LYS 18 11.086 8.804 -8.342 1.00247.80 C ATOM 135 O LYS 18 11.370 7.614 -8.377 1.00247.80 O ATOM 136 N GLY 19 11.553 9.642 -9.269 1.00225.37 N ATOM 137 CA GLY 19 12.429 9.121 -10.277 1.00225.37 C ATOM 138 C GLY 19 11.539 8.793 -11.426 1.00225.37 C ATOM 139 O GLY 19 11.839 9.078 -12.584 1.00225.37 O ATOM 140 N ALA 20 10.401 8.160 -11.095 1.00122.00 N ATOM 141 CA ALA 20 9.327 7.885 -11.993 1.00122.00 C ATOM 142 CB ALA 20 8.201 7.043 -11.362 1.00122.00 C ATOM 143 C ALA 20 8.781 9.233 -12.286 1.00122.00 C ATOM 144 O ALA 20 8.156 9.459 -13.320 1.00122.00 O ATOM 145 N GLU 21 9.014 10.159 -11.333 1.00249.48 N ATOM 146 CA GLU 21 8.520 11.502 -11.400 1.00249.48 C ATOM 147 CB GLU 21 8.874 12.214 -12.716 1.00249.48 C ATOM 148 CG GLU 21 10.370 12.509 -12.846 1.00249.48 C ATOM 149 CD GLU 21 10.632 13.114 -14.219 1.00249.48 C ATOM 150 OE1 GLU 21 10.388 12.405 -15.231 1.00249.48 O ATOM 151 OE2 GLU 21 11.083 14.289 -14.274 1.00249.48 O ATOM 152 C GLU 21 7.041 11.458 -11.252 1.00249.48 C ATOM 153 O GLU 21 6.310 12.207 -11.899 1.00249.48 O ATOM 154 N ALA 22 6.566 10.556 -10.373 1.00 70.94 N ATOM 155 CA ALA 22 5.161 10.501 -10.119 1.00 70.94 C ATOM 156 CB ALA 22 4.489 9.210 -10.620 1.00 70.94 C ATOM 157 C ALA 22 4.958 10.571 -8.637 1.00 70.94 C ATOM 158 O ALA 22 5.832 10.208 -7.850 1.00 70.94 O ATOM 159 N THR 23 3.778 11.083 -8.232 1.00113.92 N ATOM 160 CA THR 23 3.407 11.203 -6.848 1.00113.92 C ATOM 161 CB THR 23 3.000 12.602 -6.473 1.00113.92 C ATOM 162 OG1 THR 23 2.782 12.696 -5.073 1.00113.92 O ATOM 163 CG2 THR 23 1.716 12.976 -7.231 1.00113.92 C ATOM 164 C THR 23 2.215 10.318 -6.654 1.00113.92 C ATOM 165 O THR 23 1.332 10.273 -7.507 1.00113.92 O ATOM 166 N VAL 24 2.152 9.577 -5.527 1.00 48.83 N ATOM 167 CA VAL 24 1.038 8.684 -5.348 1.00 48.83 C ATOM 168 CB VAL 24 1.452 7.291 -4.961 1.00 48.83 C ATOM 169 CG1 VAL 24 0.197 6.448 -4.686 1.00 48.83 C ATOM 170 CG2 VAL 24 2.336 6.724 -6.086 1.00 48.83 C ATOM 171 C VAL 24 0.133 9.215 -4.278 1.00 48.83 C ATOM 172 O VAL 24 0.592 9.695 -3.242 1.00 48.83 O ATOM 173 N THR 25 -1.195 9.149 -4.522 1.00124.79 N ATOM 174 CA THR 25 -2.160 9.625 -3.568 1.00124.79 C ATOM 175 CB THR 25 -2.961 10.786 -4.070 1.00124.79 C ATOM 176 OG1 THR 25 -3.832 11.258 -3.050 1.00124.79 O ATOM 177 CG2 THR 25 -3.777 10.322 -5.289 1.00124.79 C ATOM 178 C THR 25 -3.157 8.534 -3.302 1.00124.79 C ATOM 179 O THR 25 -3.557 7.808 -4.211 1.00124.79 O ATOM 180 N GLY 26 -3.602 8.406 -2.034 1.00118.55 N ATOM 181 CA GLY 26 -4.563 7.391 -1.694 1.00118.55 C ATOM 182 C GLY 26 -5.739 8.062 -1.059 1.00118.55 C ATOM 183 O GLY 26 -5.582 9.005 -0.286 1.00118.55 O ATOM 184 N ALA 27 -6.963 7.582 -1.360 1.00 60.83 N ATOM 185 CA ALA 27 -8.115 8.227 -0.792 1.00 60.83 C ATOM 186 CB ALA 27 -8.839 9.167 -1.770 1.00 60.83 C ATOM 187 C ALA 27 -9.118 7.205 -0.361 1.00 60.83 C ATOM 188 O ALA 27 -9.226 6.130 -0.948 1.00 60.83 O ATOM 189 N TYR 28 -9.855 7.530 0.724 1.00 72.00 N ATOM 190 CA TYR 28 -10.924 6.718 1.236 1.00 72.00 C ATOM 191 CB TYR 28 -10.547 5.797 2.413 1.00 72.00 C ATOM 192 CG TYR 28 -9.684 4.683 1.937 1.00 72.00 C ATOM 193 CD1 TYR 28 -8.315 4.817 1.904 1.00 72.00 C ATOM 194 CD2 TYR 28 -10.255 3.500 1.528 1.00 72.00 C ATOM 195 CE1 TYR 28 -7.526 3.781 1.466 1.00 72.00 C ATOM 196 CE2 TYR 28 -9.473 2.461 1.090 1.00 72.00 C ATOM 197 CZ TYR 28 -8.107 2.601 1.057 1.00 72.00 C ATOM 198 OH TYR 28 -7.301 1.536 0.608 1.00 72.00 O ATOM 199 C TYR 28 -11.982 7.635 1.766 1.00 72.00 C ATOM 200 O TYR 28 -11.702 8.750 2.201 1.00 72.00 O ATOM 201 N ASP 29 -13.233 7.144 1.786 1.00 94.99 N ATOM 202 CA ASP 29 -14.378 7.892 2.225 1.00 94.99 C ATOM 203 CB ASP 29 -15.702 7.125 2.065 1.00 94.99 C ATOM 204 CG ASP 29 -15.672 5.915 2.987 1.00 94.99 C ATOM 205 OD1 ASP 29 -14.766 5.055 2.817 1.00 94.99 O ATOM 206 OD2 ASP 29 -16.550 5.841 3.888 1.00 94.99 O ATOM 207 C ASP 29 -14.234 8.204 3.679 1.00 94.99 C ATOM 208 O ASP 29 -14.847 9.142 4.187 1.00 94.99 O ATOM 698 N THR 94 -4.424 -4.252 -6.821 1.00 56.84 N ATOM 699 CA THR 94 -3.851 -3.864 -8.078 1.00 56.84 C ATOM 700 CB THR 94 -4.402 -2.534 -8.546 1.00 56.84 C ATOM 701 OG1 THR 94 -5.823 -2.590 -8.564 1.00 56.84 O ATOM 702 CG2 THR 94 -3.905 -2.201 -9.965 1.00 56.84 C ATOM 703 C THR 94 -2.364 -3.716 -7.895 1.00 56.84 C ATOM 704 O THR 94 -1.849 -3.778 -6.779 1.00 56.84 O ATOM 705 N THR 95 -1.629 -3.552 -9.015 1.00129.89 N ATOM 706 CA THR 95 -0.210 -3.353 -8.983 1.00129.89 C ATOM 707 CB THR 95 0.565 -4.326 -9.825 1.00129.89 C ATOM 708 OG1 THR 95 1.952 -4.213 -9.549 1.00129.89 O ATOM 709 CG2 THR 95 0.289 -4.031 -11.309 1.00129.89 C ATOM 710 C THR 95 0.039 -1.976 -9.525 1.00129.89 C ATOM 711 O THR 95 -0.898 -1.297 -9.940 1.00129.89 O ATOM 712 N VAL 96 1.305 -1.503 -9.521 1.00257.27 N ATOM 713 CA VAL 96 1.552 -0.160 -9.980 1.00257.27 C ATOM 714 CB VAL 96 2.759 0.488 -9.356 1.00257.27 C ATOM 715 CG1 VAL 96 2.471 0.709 -7.863 1.00257.27 C ATOM 716 CG2 VAL 96 3.998 -0.387 -9.620 1.00257.27 C ATOM 717 C VAL 96 1.746 -0.128 -11.475 1.00257.27 C ATOM 718 O VAL 96 2.683 -0.726 -11.998 1.00257.27 O ATOM 719 N TYR 97 0.846 0.608 -12.178 1.00160.14 N ATOM 720 CA TYR 97 0.713 0.793 -13.612 1.00160.14 C ATOM 721 CB TYR 97 -0.608 1.469 -14.022 1.00160.14 C ATOM 722 CG TYR 97 -1.769 0.556 -13.852 1.00160.14 C ATOM 723 CD1 TYR 97 -2.455 0.486 -12.662 1.00160.14 C ATOM 724 CD2 TYR 97 -2.182 -0.225 -14.907 1.00160.14 C ATOM 725 CE1 TYR 97 -3.533 -0.357 -12.528 1.00160.14 C ATOM 726 CE2 TYR 97 -3.257 -1.069 -14.781 1.00160.14 C ATOM 727 CZ TYR 97 -3.935 -1.136 -13.587 1.00160.14 C ATOM 728 OH TYR 97 -5.041 -2.001 -13.454 1.00160.14 O ATOM 729 C TYR 97 1.765 1.642 -14.286 1.00160.14 C ATOM 730 O TYR 97 2.169 1.331 -15.407 1.00160.14 O ATOM 731 N MET 98 2.259 2.716 -13.634 1.00129.30 N ATOM 732 CA MET 98 3.011 3.758 -14.301 1.00129.30 C ATOM 733 CB MET 98 3.632 4.816 -13.382 1.00129.30 C ATOM 734 CG MET 98 4.338 5.892 -14.216 1.00129.30 C ATOM 735 SD MET 98 5.667 6.791 -13.368 1.00129.30 S ATOM 736 CE MET 98 6.890 5.487 -13.691 1.00129.30 C ATOM 737 C MET 98 4.180 3.225 -15.039 1.00129.30 C ATOM 738 O MET 98 4.542 3.781 -16.074 1.00129.30 O ATOM 739 N VAL 99 4.818 2.164 -14.516 1.00 42.33 N ATOM 740 CA VAL 99 5.972 1.597 -15.145 1.00 42.33 C ATOM 741 CB VAL 99 6.351 0.287 -14.511 1.00 42.33 C ATOM 742 CG1 VAL 99 7.547 -0.307 -15.265 1.00 42.33 C ATOM 743 CG2 VAL 99 6.620 0.517 -13.014 1.00 42.33 C ATOM 744 C VAL 99 5.578 1.308 -16.562 1.00 42.33 C ATOM 745 O VAL 99 6.327 1.587 -17.495 1.00 42.33 O ATOM 746 N ASP 100 4.361 0.768 -16.738 1.00 84.92 N ATOM 747 CA ASP 100 3.836 0.465 -18.037 1.00 84.92 C ATOM 748 CB ASP 100 2.442 -0.179 -17.956 1.00 84.92 C ATOM 749 CG ASP 100 1.988 -0.478 -19.375 1.00 84.92 C ATOM 750 OD1 ASP 100 2.872 -0.566 -20.268 1.00 84.92 O ATOM 751 OD2 ASP 100 0.754 -0.626 -19.585 1.00 84.92 O ATOM 752 C ASP 100 3.664 1.732 -18.824 1.00 84.92 C ATOM 753 O ASP 100 4.062 1.801 -19.986 1.00 84.92 O ATOM 754 N TYR 101 3.082 2.782 -18.202 1.00 58.15 N ATOM 755 CA TYR 101 2.776 3.989 -18.927 1.00 58.15 C ATOM 756 CB TYR 101 2.089 5.092 -18.094 1.00 58.15 C ATOM 757 CG TYR 101 0.790 4.626 -17.527 1.00 58.15 C ATOM 758 CD1 TYR 101 -0.312 4.448 -18.331 1.00 58.15 C ATOM 759 CD2 TYR 101 0.685 4.351 -16.184 1.00 58.15 C ATOM 760 CE1 TYR 101 -1.505 4.020 -17.794 1.00 58.15 C ATOM 761 CE2 TYR 101 -0.504 3.923 -15.642 1.00 58.15 C ATOM 762 CZ TYR 101 -1.603 3.756 -16.451 1.00 58.15 C ATOM 763 OH TYR 101 -2.830 3.317 -15.905 1.00 58.15 O ATOM 764 C TYR 101 4.038 4.616 -19.417 1.00 58.15 C ATOM 765 O TYR 101 4.140 5.022 -20.573 1.00 58.15 O ATOM 766 N THR 102 5.054 4.712 -18.546 1.00105.09 N ATOM 767 CA THR 102 6.266 5.349 -18.960 1.00105.09 C ATOM 768 CB THR 102 7.301 5.441 -17.885 1.00105.09 C ATOM 769 OG1 THR 102 8.363 6.277 -18.322 1.00105.09 O ATOM 770 CG2 THR 102 7.820 4.027 -17.573 1.00105.09 C ATOM 771 C THR 102 6.839 4.530 -20.057 1.00105.09 C ATOM 772 O THR 102 7.481 5.057 -20.964 1.00105.09 O ATOM 773 N SER 103 6.609 3.208 -19.993 1.00 70.68 N ATOM 774 CA SER 103 7.137 2.312 -20.973 1.00 70.68 C ATOM 775 CB SER 103 6.579 0.890 -20.811 1.00 70.68 C ATOM 776 OG SER 103 7.089 0.043 -21.831 1.00 70.68 O ATOM 777 C SER 103 6.724 2.802 -22.324 1.00 70.68 C ATOM 778 O SER 103 7.562 2.932 -23.213 1.00 70.68 O ATOM 779 N THR 104 5.425 3.105 -22.509 1.00105.62 N ATOM 780 CA THR 104 4.983 3.570 -23.792 1.00105.62 C ATOM 781 CB THR 104 3.490 3.708 -23.942 1.00105.62 C ATOM 782 OG1 THR 104 3.173 3.981 -25.301 1.00105.62 O ATOM 783 CG2 THR 104 2.963 4.835 -23.039 1.00105.62 C ATOM 784 C THR 104 5.599 4.902 -24.056 1.00105.62 C ATOM 785 O THR 104 5.961 5.208 -25.191 1.00105.62 O ATOM 786 N THR 105 5.745 5.736 -23.010 1.00 34.20 N ATOM 787 CA THR 105 6.267 7.056 -23.219 1.00 34.20 C ATOM 788 CB THR 105 6.401 7.849 -21.951 1.00 34.20 C ATOM 789 OG1 THR 105 5.144 7.971 -21.303 1.00 34.20 O ATOM 790 CG2 THR 105 6.951 9.242 -22.305 1.00 34.20 C ATOM 791 C THR 105 7.642 6.966 -23.804 1.00 34.20 C ATOM 792 O THR 105 7.949 7.641 -24.784 1.00 34.20 O ATOM 793 N SER 106 8.509 6.110 -23.230 1.00 68.50 N ATOM 794 CA SER 106 9.862 6.034 -23.700 1.00 68.50 C ATOM 795 CB SER 106 10.743 5.068 -22.891 1.00 68.50 C ATOM 796 OG SER 106 12.061 5.059 -23.423 1.00 68.50 O ATOM 797 C SER 106 9.829 5.525 -25.102 1.00 68.50 C ATOM 798 O SER 106 10.734 5.788 -25.892 1.00 68.50 O ATOM 799 N GLY 107 8.755 4.796 -25.435 1.00 32.84 N ATOM 800 CA GLY 107 8.568 4.181 -26.720 1.00 32.84 C ATOM 801 C GLY 107 8.514 5.246 -27.765 1.00 32.84 C ATOM 802 O GLY 107 8.871 5.008 -28.916 1.00 32.84 O ATOM 803 N GLU 108 8.038 6.444 -27.386 1.00118.47 N ATOM 804 CA GLU 108 7.851 7.524 -28.309 1.00118.47 C ATOM 805 CB GLU 108 7.473 8.829 -27.589 1.00118.47 C ATOM 806 CG GLU 108 7.379 10.062 -28.495 1.00118.47 C ATOM 807 CD GLU 108 5.975 10.136 -29.076 1.00118.47 C ATOM 808 OE1 GLU 108 5.521 9.124 -29.672 1.00118.47 O ATOM 809 OE2 GLU 108 5.338 11.214 -28.933 1.00118.47 O ATOM 810 C GLU 108 9.131 7.792 -29.019 1.00118.47 C ATOM 811 O GLU 108 9.137 7.910 -30.243 1.00118.47 O TER 947 LYS 124 END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 322 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 85.67 40.4 57 48.3 118 ARMSMC SECONDARY STRUCTURE . . 86.71 37.5 24 36.4 66 ARMSMC SURFACE . . . . . . . . 84.96 43.6 39 48.8 80 ARMSMC BURIED . . . . . . . . 87.18 33.3 18 47.4 38 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.30 50.0 22 43.1 51 ARMSSC1 RELIABLE SIDE CHAINS . 91.74 42.1 19 43.2 44 ARMSSC1 SECONDARY STRUCTURE . . 86.52 44.4 9 31.0 29 ARMSSC1 SURFACE . . . . . . . . 88.35 47.1 17 47.2 36 ARMSSC1 BURIED . . . . . . . . 74.00 60.0 5 33.3 15 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.32 57.1 14 46.7 30 ARMSSC2 RELIABLE SIDE CHAINS . 71.32 66.7 12 48.0 25 ARMSSC2 SECONDARY STRUCTURE . . 57.74 80.0 5 29.4 17 ARMSSC2 SURFACE . . . . . . . . 75.26 58.3 12 54.5 22 ARMSSC2 BURIED . . . . . . . . 75.72 50.0 2 25.0 8 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.88 37.5 8 40.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 57.30 42.9 7 38.9 18 ARMSSC3 SECONDARY STRUCTURE . . 127.23 0.0 2 18.2 11 ARMSSC3 SURFACE . . . . . . . . 87.46 28.6 7 50.0 14 ARMSSC3 BURIED . . . . . . . . 9.30 100.0 1 16.7 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 112.27 0.0 3 42.9 7 ARMSSC4 RELIABLE SIDE CHAINS . 112.27 0.0 3 42.9 7 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 3 ARMSSC4 SURFACE . . . . . . . . 112.27 0.0 3 42.9 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.77 (Number of atoms: 44) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.77 44 73.3 60 CRMSCA CRN = ALL/NP . . . . . 0.2220 CRMSCA SECONDARY STRUCTURE . . 8.63 21 63.6 33 CRMSCA SURFACE . . . . . . . . 10.62 30 73.2 41 CRMSCA BURIED . . . . . . . . 7.64 14 73.7 19 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.86 215 72.9 295 CRMSMC SECONDARY STRUCTURE . . 8.88 104 63.4 164 CRMSMC SURFACE . . . . . . . . 10.66 147 72.8 202 CRMSMC BURIED . . . . . . . . 7.86 68 73.1 93 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.29 146 21.8 671 CRMSSC RELIABLE SIDE CHAINS . 11.37 128 20.0 641 CRMSSC SECONDARY STRUCTURE . . 10.27 80 20.2 396 CRMSSC SURFACE . . . . . . . . 12.03 103 22.1 467 CRMSSC BURIED . . . . . . . . 9.28 43 21.1 204 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.47 322 35.3 911 CRMSALL SECONDARY STRUCTURE . . 9.56 164 31.1 528 CRMSALL SURFACE . . . . . . . . 11.23 223 35.3 631 CRMSALL BURIED . . . . . . . . 8.52 99 35.4 280 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 95.307 0.795 0.819 44 73.3 60 ERRCA SECONDARY STRUCTURE . . 101.019 0.832 0.847 21 63.6 33 ERRCA SURFACE . . . . . . . . 100.361 0.782 0.809 30 73.2 41 ERRCA BURIED . . . . . . . . 84.476 0.822 0.840 14 73.7 19 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 95.561 0.797 0.821 215 72.9 295 ERRMC SECONDARY STRUCTURE . . 100.738 0.829 0.844 104 63.4 164 ERRMC SURFACE . . . . . . . . 100.549 0.785 0.812 147 72.8 202 ERRMC BURIED . . . . . . . . 84.778 0.823 0.840 68 73.1 93 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 101.659 0.797 0.820 146 21.8 671 ERRSC RELIABLE SIDE CHAINS . 102.449 0.801 0.822 128 20.0 641 ERRSC SECONDARY STRUCTURE . . 102.929 0.818 0.835 80 20.2 396 ERRSC SURFACE . . . . . . . . 105.797 0.786 0.811 103 22.1 467 ERRSC BURIED . . . . . . . . 91.745 0.824 0.840 43 21.1 204 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 98.202 0.797 0.820 322 35.3 911 ERRALL SECONDARY STRUCTURE . . 101.874 0.824 0.840 164 31.1 528 ERRALL SURFACE . . . . . . . . 102.956 0.786 0.811 223 35.3 631 ERRALL BURIED . . . . . . . . 87.492 0.822 0.839 99 35.4 280 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 4 28 44 60 DISTCA CA (P) 0.00 0.00 0.00 6.67 46.67 60 DISTCA CA (RMS) 0.00 0.00 0.00 4.16 7.63 DISTCA ALL (N) 0 1 2 15 181 322 911 DISTALL ALL (P) 0.00 0.11 0.22 1.65 19.87 911 DISTALL ALL (RMS) 0.00 1.58 2.05 4.01 7.59 DISTALL END of the results output