####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 62 ( 478), selected 62 , name T0579TS117_1-D2 # Molecule2: number of CA atoms 64 ( 966), selected 62 , name T0579-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0579TS117_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 48 44 - 93 4.90 6.23 LCS_AVERAGE: 63.76 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 57 - 77 2.00 7.38 LCS_AVERAGE: 21.50 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 64 - 74 0.99 7.50 LONGEST_CONTINUOUS_SEGMENT: 11 83 - 93 0.99 7.35 LCS_AVERAGE: 12.10 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 62 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 30 T 30 8 10 13 4 7 18 23 32 37 39 40 46 46 49 49 51 51 51 52 52 55 55 56 LCS_GDT T 31 T 31 8 10 13 4 9 18 25 34 37 40 44 46 47 49 50 51 51 51 52 53 55 58 60 LCS_GDT A 32 A 32 8 10 13 4 10 22 29 34 37 40 44 46 47 49 50 51 51 51 52 53 55 58 60 LCS_GDT Y 33 Y 33 8 10 13 7 15 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT V 34 V 34 8 10 13 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT V 35 V 35 8 10 13 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT S 36 S 36 8 10 13 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT Y 37 Y 37 8 10 13 8 19 23 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT T 38 T 38 8 10 13 3 4 16 28 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT P 39 P 39 4 10 13 3 4 5 5 9 14 21 25 26 38 40 46 47 49 50 52 53 55 58 60 LCS_GDT T 40 T 40 3 5 24 3 3 4 4 6 7 8 9 14 20 23 34 42 46 49 51 54 55 58 60 LCS_GDT N 41 N 41 3 6 24 3 3 4 7 7 10 11 14 16 20 24 31 42 46 49 51 54 55 58 60 LCS_GDT G 42 G 42 3 6 24 3 3 5 7 7 8 10 12 16 20 24 27 30 34 40 48 54 55 58 60 LCS_GDT G 43 G 43 3 6 24 3 3 5 7 7 8 10 12 16 20 25 28 37 40 47 51 54 55 58 60 LCS_GDT Q 44 Q 44 5 6 48 3 4 5 7 7 8 10 12 14 19 24 26 29 36 43 51 54 55 58 60 LCS_GDT R 45 R 45 5 6 48 3 4 5 6 6 8 10 12 16 20 26 29 38 44 47 51 54 55 58 60 LCS_GDT V 46 V 46 5 6 48 3 4 5 7 7 8 10 12 16 20 26 37 41 45 48 51 54 55 58 60 LCS_GDT D 47 D 47 5 6 48 3 4 5 6 7 7 10 11 12 17 22 31 41 45 50 51 53 54 57 60 LCS_GDT H 48 H 48 5 6 48 3 4 5 6 7 7 10 11 16 16 22 25 30 34 39 46 50 52 54 56 LCS_GDT H 49 H 49 5 11 48 3 4 5 8 10 13 16 18 22 24 31 40 42 48 50 51 54 55 58 60 LCS_GDT K 50 K 50 8 14 48 3 5 8 12 15 16 25 35 42 45 48 50 51 51 51 52 54 55 58 60 LCS_GDT W 51 W 51 8 14 48 3 5 8 12 15 21 33 39 44 46 48 50 51 51 51 52 54 55 58 60 LCS_GDT V 52 V 52 8 14 48 3 5 8 12 17 28 38 43 45 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT I 53 I 53 8 14 48 3 5 8 12 17 31 38 43 45 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT Q 54 Q 54 8 14 48 3 5 8 12 21 34 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT E 55 E 55 8 18 48 3 5 8 25 32 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT E 56 E 56 8 18 48 3 5 9 25 32 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT I 57 I 57 8 19 48 4 9 24 27 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT K 58 K 58 6 19 48 4 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT D 59 D 59 6 19 48 4 11 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT A 60 A 60 6 19 48 4 4 8 15 32 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT G 61 G 61 3 19 48 0 5 12 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT D 62 D 62 5 19 48 3 9 24 27 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT K 63 K 63 5 19 48 3 5 17 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT T 64 T 64 11 19 48 3 4 20 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT L 65 L 65 11 19 48 6 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT Q 66 Q 66 11 19 48 3 19 24 28 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT P 67 P 67 11 19 48 4 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT G 68 G 68 11 19 48 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT D 69 D 69 11 19 48 6 19 24 28 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT Q 70 Q 70 11 19 48 6 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT V 71 V 71 11 19 48 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT I 72 I 72 11 19 48 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT L 73 L 73 11 19 48 5 13 23 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT E 74 E 74 11 19 48 6 10 19 29 34 37 39 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT H 77 H 77 0 19 48 0 0 3 3 6 29 37 43 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT M 78 M 78 3 14 48 0 3 17 25 32 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT K 79 K 79 4 14 48 3 9 20 27 32 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT G 80 G 80 4 14 48 3 4 8 12 18 30 37 43 45 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT M 81 M 81 5 14 48 3 4 6 16 26 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT K 82 K 82 9 14 48 4 11 22 28 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT G 83 G 83 11 14 48 6 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT A 84 A 84 11 14 48 6 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT T 85 T 85 11 14 48 6 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT A 86 A 86 11 14 48 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT E 87 E 87 11 14 48 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT I 88 I 88 11 14 48 6 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT D 89 D 89 11 14 48 7 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT S 90 S 90 11 14 48 7 15 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT A 91 A 91 11 14 48 5 10 19 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 LCS_GDT E 92 E 92 11 13 48 5 10 22 29 34 37 40 44 46 47 49 50 51 51 51 52 53 55 58 60 LCS_GDT K 93 K 93 11 13 48 4 10 22 29 34 37 40 44 46 47 49 50 51 51 51 52 53 55 58 60 LCS_AVERAGE LCS_A: 32.45 ( 12.10 21.50 63.76 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 19 24 29 34 37 40 44 46 47 49 50 51 51 51 52 54 55 58 60 GDT PERCENT_AT 12.50 29.69 37.50 45.31 53.12 57.81 62.50 68.75 71.88 73.44 76.56 78.12 79.69 79.69 79.69 81.25 84.38 85.94 90.62 93.75 GDT RMS_LOCAL 0.34 0.68 1.04 1.30 1.50 1.66 2.00 2.25 2.40 2.54 2.74 3.01 3.10 3.10 3.10 3.34 5.32 4.65 5.49 5.65 GDT RMS_ALL_AT 6.77 6.61 6.59 7.07 7.14 6.99 6.63 6.64 6.75 6.56 6.61 6.41 6.47 6.47 6.47 6.42 6.02 6.04 5.95 5.93 # Checking swapping # possible swapping detected: D 47 D 47 # possible swapping detected: E 55 E 55 # possible swapping detected: E 56 E 56 # possible swapping detected: D 59 D 59 # possible swapping detected: E 74 E 74 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 30 T 30 4.914 0 0.198 1.096 7.905 35.714 28.367 LGA T 31 T 31 3.577 0 0.034 0.205 4.052 45.119 45.306 LGA A 32 A 32 2.524 0 0.079 0.086 2.944 67.143 65.143 LGA Y 33 Y 33 0.825 0 0.175 1.310 6.088 83.810 58.810 LGA V 34 V 34 0.400 0 0.153 0.156 0.919 97.619 95.918 LGA V 35 V 35 0.799 0 0.088 0.089 1.570 81.548 82.857 LGA S 36 S 36 1.382 0 0.073 0.681 3.250 83.690 77.698 LGA Y 37 Y 37 1.741 0 0.152 1.230 6.998 65.119 45.833 LGA T 38 T 38 3.675 0 0.576 0.649 7.400 34.881 46.735 LGA P 39 P 39 9.062 0 0.631 0.561 11.483 4.643 9.456 LGA T 40 T 40 13.816 0 0.042 1.260 17.499 0.000 0.000 LGA N 41 N 41 15.182 0 0.695 1.098 15.894 0.000 0.000 LGA G 42 G 42 16.474 0 0.499 0.499 16.474 0.000 0.000 LGA G 43 G 43 14.328 0 0.115 0.115 15.199 0.000 0.000 LGA Q 44 Q 44 16.165 0 0.624 0.796 16.482 0.000 0.000 LGA R 45 R 45 15.338 0 0.308 1.052 19.237 0.000 0.000 LGA V 46 V 46 13.542 0 0.167 0.202 15.839 0.000 0.000 LGA D 47 D 47 12.716 0 0.592 1.257 14.026 0.000 0.000 LGA H 48 H 48 14.838 0 0.414 0.835 19.320 0.000 0.000 LGA H 49 H 49 13.185 0 0.623 1.199 13.868 0.000 0.000 LGA K 50 K 50 8.837 0 0.639 0.887 12.834 1.548 0.741 LGA W 51 W 51 8.217 0 0.276 1.227 14.737 7.262 2.279 LGA V 52 V 52 5.833 0 0.112 1.045 6.852 19.405 20.476 LGA I 53 I 53 5.348 0 0.186 0.210 6.461 28.810 24.583 LGA Q 54 Q 54 4.343 0 0.088 1.316 9.137 40.476 26.772 LGA E 55 E 55 3.723 0 0.140 1.044 8.426 43.333 26.984 LGA E 56 E 56 3.527 0 0.048 1.001 6.599 50.238 34.339 LGA I 57 I 57 1.419 0 0.165 0.165 2.718 81.786 77.619 LGA K 58 K 58 0.786 0 0.174 0.725 2.894 86.429 75.344 LGA D 59 D 59 0.928 0 0.167 0.353 3.151 73.929 73.571 LGA A 60 A 60 2.912 0 0.595 0.612 3.772 57.500 54.667 LGA G 61 G 61 2.359 0 0.353 0.353 2.769 64.881 64.881 LGA D 62 D 62 1.476 0 0.420 0.878 6.629 79.881 54.167 LGA K 63 K 63 2.613 0 0.158 1.270 9.991 71.071 40.370 LGA T 64 T 64 2.427 0 0.313 1.161 3.688 70.952 59.116 LGA L 65 L 65 1.477 0 0.292 0.279 2.800 77.143 72.024 LGA Q 66 Q 66 2.236 0 0.063 0.998 4.186 70.833 58.677 LGA P 67 P 67 1.841 0 0.119 0.391 3.645 70.833 63.061 LGA G 68 G 68 0.706 0 0.073 0.073 1.323 85.952 85.952 LGA D 69 D 69 2.008 0 0.145 0.860 4.438 75.119 59.405 LGA Q 70 Q 70 1.657 0 0.104 0.949 3.757 77.143 67.090 LGA V 71 V 71 1.467 0 0.061 0.089 2.191 77.143 72.993 LGA I 72 I 72 1.539 0 0.082 0.552 1.924 75.000 78.274 LGA L 73 L 73 2.405 0 0.087 1.392 4.285 60.952 61.548 LGA E 74 E 74 3.736 0 0.644 1.148 5.317 39.167 44.815 LGA H 77 H 77 4.742 0 0.750 1.265 6.981 33.333 24.238 LGA M 78 M 78 3.599 0 0.630 0.837 6.415 48.452 37.560 LGA K 79 K 79 3.152 0 0.584 1.051 5.797 40.833 35.503 LGA G 80 G 80 6.426 0 0.111 0.111 6.723 22.024 22.024 LGA M 81 M 81 3.562 0 0.556 1.001 11.183 55.714 35.774 LGA K 82 K 82 1.417 0 0.123 0.637 3.429 73.095 65.132 LGA G 83 G 83 1.025 0 0.137 0.137 1.747 81.548 81.548 LGA A 84 A 84 1.220 0 0.126 0.164 1.656 81.548 81.524 LGA T 85 T 85 1.411 0 0.099 0.106 1.718 81.429 77.755 LGA A 86 A 86 1.411 0 0.082 0.097 1.572 79.286 78.000 LGA E 87 E 87 0.975 0 0.089 0.644 3.011 88.214 76.455 LGA I 88 I 88 0.817 0 0.150 0.628 2.138 90.476 83.869 LGA D 89 D 89 1.341 0 0.119 0.125 2.204 77.381 78.333 LGA S 90 S 90 1.277 0 0.111 0.567 1.522 83.690 81.508 LGA A 91 A 91 1.985 0 0.025 0.037 2.930 75.000 71.429 LGA E 92 E 92 1.821 0 0.077 0.885 4.138 61.548 59.471 LGA K 93 K 93 2.610 0 0.126 0.795 3.425 60.952 58.042 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 62 248 248 100.00 478 478 100.00 64 SUMMARY(RMSD_GDC): 5.924 5.883 6.573 50.322 45.376 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 62 64 4.0 44 2.25 56.250 50.351 1.875 LGA_LOCAL RMSD: 2.246 Number of atoms: 44 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.641 Number of assigned atoms: 62 Std_ASGN_ATOMS RMSD: 5.924 Standard rmsd on all 62 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.133844 * X + -0.948100 * Y + -0.288431 * Z + -2.517750 Y_new = -0.900984 * X + 0.004786 * Y + -0.433826 * Z + 23.173065 Z_new = 0.412691 * X + 0.317937 * Y + -0.853582 * Z + -0.938984 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.423321 -0.425406 2.785038 [DEG: -81.5503 -24.3740 159.5709 ] ZXZ: -0.586747 2.593619 0.914366 [DEG: -33.6181 148.6034 52.3893 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0579TS117_1-D2 REMARK 2: T0579-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0579TS117_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 62 64 4.0 44 2.25 50.351 5.92 REMARK ---------------------------------------------------------- MOLECULE T0579TS117_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0579 REMARK MODEL 1 REMARK PARENT N/A ATOM 196 N THR 30 -6.318 7.850 2.504 1.00 0.00 N ATOM 197 CA THR 30 -5.985 6.466 2.337 1.00 0.00 C ATOM 198 C THR 30 -5.361 6.039 3.647 1.00 0.00 C ATOM 199 O THR 30 -4.300 6.545 4.002 1.00 0.00 O ATOM 200 CB THR 30 -4.995 6.259 1.175 1.00 0.00 C ATOM 201 OG1 THR 30 -5.586 6.718 -0.047 1.00 0.00 O ATOM 202 CG2 THR 30 -4.645 4.786 1.030 1.00 0.00 C ATOM 203 N THR 31 -5.998 5.110 4.400 1.00 0.00 N ATOM 204 CA THR 31 -5.389 4.434 5.518 1.00 0.00 C ATOM 205 C THR 31 -4.461 3.312 5.108 1.00 0.00 C ATOM 206 O THR 31 -4.916 2.363 4.483 1.00 0.00 O ATOM 207 CB THR 31 -6.447 3.805 6.444 1.00 0.00 C ATOM 208 OG1 THR 31 -7.313 4.829 6.949 1.00 0.00 O ATOM 209 CG2 THR 31 -5.779 3.101 7.615 1.00 0.00 C ATOM 210 N ALA 32 -3.164 3.378 5.512 1.00 0.00 N ATOM 211 CA ALA 32 -2.158 2.340 5.342 1.00 0.00 C ATOM 212 C ALA 32 -2.148 1.454 6.556 1.00 0.00 C ATOM 213 O ALA 32 -2.775 1.801 7.552 1.00 0.00 O ATOM 214 CB ALA 32 -0.781 2.961 5.168 1.00 0.00 C ATOM 215 N TYR 33 -1.435 0.298 6.502 1.00 0.00 N ATOM 216 CA TYR 33 -1.691 -0.842 7.363 1.00 0.00 C ATOM 217 C TYR 33 -0.352 -1.523 7.442 1.00 0.00 C ATOM 218 O TYR 33 0.055 -2.170 6.483 1.00 0.00 O ATOM 219 CB TYR 33 -2.761 -1.748 6.748 1.00 0.00 C ATOM 220 CG TYR 33 -3.207 -2.872 7.655 1.00 0.00 C ATOM 221 CD1 TYR 33 -4.086 -2.633 8.703 1.00 0.00 C ATOM 222 CD2 TYR 33 -2.747 -4.168 7.461 1.00 0.00 C ATOM 223 CE1 TYR 33 -4.500 -3.654 9.538 1.00 0.00 C ATOM 224 CE2 TYR 33 -3.149 -5.202 8.286 1.00 0.00 C ATOM 225 CZ TYR 33 -4.033 -4.934 9.330 1.00 0.00 C ATOM 226 OH TYR 33 -4.443 -5.952 10.160 1.00 0.00 H ATOM 227 N VAL 34 0.370 -1.391 8.573 1.00 0.00 N ATOM 228 CA VAL 34 1.771 -1.733 8.637 1.00 0.00 C ATOM 229 C VAL 34 1.702 -3.081 9.295 1.00 0.00 C ATOM 230 O VAL 34 0.927 -3.236 10.240 1.00 0.00 O ATOM 231 CB VAL 34 2.566 -0.705 9.463 1.00 0.00 C ATOM 232 CG1 VAL 34 4.024 -1.127 9.579 1.00 0.00 C ATOM 233 CG2 VAL 34 2.514 0.665 8.802 1.00 0.00 C ATOM 234 N VAL 35 2.482 -4.071 8.797 1.00 0.00 N ATOM 235 CA VAL 35 2.298 -5.463 9.106 1.00 0.00 C ATOM 236 C VAL 35 3.677 -6.060 9.099 1.00 0.00 C ATOM 237 O VAL 35 4.540 -5.610 8.341 1.00 0.00 O ATOM 238 CB VAL 35 1.403 -6.160 8.065 1.00 0.00 C ATOM 239 CG1 VAL 35 0.001 -5.569 8.087 1.00 0.00 C ATOM 240 CG2 VAL 35 1.976 -5.984 6.666 1.00 0.00 C ATOM 241 N SER 36 3.908 -7.086 9.950 1.00 0.00 N ATOM 242 CA SER 36 5.128 -7.835 10.008 1.00 0.00 C ATOM 243 C SER 36 4.801 -9.237 9.585 1.00 0.00 C ATOM 244 O SER 36 3.774 -9.773 9.971 1.00 0.00 O ATOM 245 CB SER 36 5.694 -7.829 11.429 1.00 0.00 C ATOM 246 OG SER 36 6.101 -6.527 11.810 1.00 0.00 O ATOM 247 N TYR 37 5.684 -9.899 8.824 1.00 0.00 N ATOM 248 CA TYR 37 5.346 -11.078 8.070 1.00 0.00 C ATOM 249 C TYR 37 6.131 -12.090 8.824 1.00 0.00 C ATOM 250 O TYR 37 7.296 -11.793 9.067 1.00 0.00 O ATOM 251 CB TYR 37 5.779 -10.923 6.611 1.00 0.00 C ATOM 252 CG TYR 37 5.521 -12.147 5.761 1.00 0.00 C ATOM 253 CD1 TYR 37 4.241 -12.441 5.308 1.00 0.00 C ATOM 254 CD2 TYR 37 6.557 -13.005 5.417 1.00 0.00 C ATOM 255 CE1 TYR 37 3.995 -13.558 4.531 1.00 0.00 C ATOM 256 CE2 TYR 37 6.330 -14.127 4.642 1.00 0.00 C ATOM 257 CZ TYR 37 5.035 -14.398 4.199 1.00 0.00 C ATOM 258 OH TYR 37 4.793 -15.510 3.426 1.00 0.00 H ATOM 259 N THR 38 5.523 -13.255 9.186 1.00 0.00 N ATOM 260 CA THR 38 6.091 -14.413 9.855 1.00 0.00 C ATOM 261 C THR 38 7.585 -14.381 10.131 1.00 0.00 C ATOM 262 O THR 38 7.899 -14.354 11.320 1.00 0.00 O ATOM 263 CB THR 38 5.878 -15.700 9.036 1.00 0.00 C ATOM 264 OG1 THR 38 4.475 -15.926 8.853 1.00 0.00 O ATOM 265 CG2 THR 38 6.481 -16.895 9.756 1.00 0.00 C ATOM 266 N PRO 39 8.544 -14.390 9.202 1.00 0.00 N ATOM 267 CA PRO 39 9.924 -14.398 9.662 1.00 0.00 C ATOM 268 C PRO 39 10.404 -13.097 10.238 1.00 0.00 C ATOM 269 O PRO 39 11.189 -13.206 11.178 1.00 0.00 O ATOM 270 CB PRO 39 10.730 -14.738 8.407 1.00 0.00 C ATOM 271 CG PRO 39 9.826 -14.384 7.275 1.00 0.00 C ATOM 272 CD PRO 39 8.426 -14.626 7.767 1.00 0.00 C ATOM 273 N THR 40 10.008 -11.911 9.714 1.00 0.00 N ATOM 274 CA THR 40 10.773 -10.704 9.943 1.00 0.00 C ATOM 275 C THR 40 10.231 -9.523 9.154 1.00 0.00 C ATOM 276 O THR 40 10.407 -8.382 9.576 1.00 0.00 O ATOM 277 CB THR 40 12.245 -10.883 9.530 1.00 0.00 C ATOM 278 OG1 THR 40 12.997 -9.724 9.914 1.00 0.00 O ATOM 279 CG2 THR 40 12.358 -11.067 8.025 1.00 0.00 C ATOM 280 N ASN 41 9.535 -9.712 8.015 1.00 0.00 N ATOM 281 CA ASN 41 9.760 -8.768 6.929 1.00 0.00 C ATOM 282 C ASN 41 8.633 -7.804 7.109 1.00 0.00 C ATOM 283 O ASN 41 7.593 -8.225 7.596 1.00 0.00 O ATOM 284 CB ASN 41 9.709 -9.485 5.577 1.00 0.00 C ATOM 285 CG ASN 41 10.820 -10.504 5.417 1.00 0.00 C ATOM 286 OD1 ASN 41 12.002 -10.159 5.450 1.00 0.00 O ATOM 287 ND2 ASN 41 10.444 -11.765 5.241 1.00 0.00 N ATOM 288 N GLY 42 8.760 -6.521 6.707 1.00 0.00 N ATOM 289 CA GLY 42 7.795 -5.531 7.118 1.00 0.00 C ATOM 290 C GLY 42 7.203 -4.936 5.874 1.00 0.00 C ATOM 291 O GLY 42 7.921 -4.725 4.895 1.00 0.00 O ATOM 292 N GLY 43 5.887 -4.632 5.892 1.00 0.00 N ATOM 293 CA GLY 43 5.218 -3.998 4.790 1.00 0.00 C ATOM 294 C GLY 43 4.532 -2.815 5.380 1.00 0.00 C ATOM 295 O GLY 43 3.955 -2.926 6.455 1.00 0.00 O ATOM 296 N GLN 44 4.603 -1.659 4.684 1.00 0.00 N ATOM 297 CA GLN 44 4.209 -0.394 5.236 1.00 0.00 C ATOM 298 C GLN 44 2.941 0.063 4.560 1.00 0.00 C ATOM 299 O GLN 44 2.360 1.070 4.960 1.00 0.00 O ATOM 300 CB GLN 44 5.303 0.652 5.013 1.00 0.00 C ATOM 301 CG GLN 44 6.610 0.346 5.726 1.00 0.00 C ATOM 302 CD GLN 44 7.668 1.403 5.484 1.00 0.00 C ATOM 303 OE1 GLN 44 7.389 2.454 4.904 1.00 0.00 O ATOM 304 NE2 GLN 44 8.888 1.131 5.929 1.00 0.00 N ATOM 305 N ARG 45 2.438 -0.666 3.550 1.00 0.00 N ATOM 306 CA ARG 45 1.628 0.016 2.568 1.00 0.00 C ATOM 307 C ARG 45 0.301 -0.574 2.899 1.00 0.00 C ATOM 308 O ARG 45 0.225 -1.509 3.687 1.00 0.00 O ATOM 309 CB ARG 45 2.117 -0.307 1.154 1.00 0.00 C ATOM 310 CG ARG 45 3.546 0.128 0.876 1.00 0.00 C ATOM 311 CD ARG 45 3.986 -0.279 -0.520 1.00 0.00 C ATOM 312 NE ARG 45 5.273 0.309 -0.883 1.00 0.00 N ATOM 313 CZ ARG 45 6.451 -0.243 -0.609 1.00 0.00 C ATOM 314 NH1 ARG 45 7.569 0.365 -0.977 1.00 0.00 H ATOM 315 NH2 ARG 45 6.506 -1.402 0.032 1.00 0.00 H ATOM 316 N VAL 46 -0.770 -0.051 2.285 1.00 0.00 N ATOM 317 CA VAL 46 -2.064 -0.662 2.273 1.00 0.00 C ATOM 318 C VAL 46 -1.996 -1.982 1.565 1.00 0.00 C ATOM 319 O VAL 46 -1.292 -2.120 0.561 1.00 0.00 O ATOM 320 CB VAL 46 -3.098 0.221 1.550 1.00 0.00 C ATOM 321 CG1 VAL 46 -4.418 -0.519 1.400 1.00 0.00 C ATOM 322 CG2 VAL 46 -3.350 1.499 2.335 1.00 0.00 C ATOM 323 N ASP 47 -2.759 -2.967 2.079 1.00 0.00 N ATOM 324 CA ASP 47 -2.552 -4.337 1.737 1.00 0.00 C ATOM 325 C ASP 47 -3.331 -4.628 0.510 1.00 0.00 C ATOM 326 O ASP 47 -2.812 -5.263 -0.407 1.00 0.00 O ATOM 327 CB ASP 47 -3.021 -5.249 2.872 1.00 0.00 C ATOM 328 CG ASP 47 -2.077 -5.235 4.059 1.00 0.00 C ATOM 329 OD1 ASP 47 -0.946 -4.726 3.911 1.00 0.00 O ATOM 330 OD2 ASP 47 -2.467 -5.734 5.135 1.00 0.00 O ATOM 331 N HIS 48 -4.602 -4.183 0.463 1.00 0.00 N ATOM 332 CA HIS 48 -5.461 -4.483 -0.641 1.00 0.00 C ATOM 333 C HIS 48 -5.564 -3.212 -1.382 1.00 0.00 C ATOM 334 O HIS 48 -6.223 -2.305 -0.879 1.00 0.00 O ATOM 335 CB HIS 48 -6.829 -4.955 -0.143 1.00 0.00 C ATOM 336 CG HIS 48 -6.789 -6.263 0.584 1.00 0.00 C ATOM 337 ND1 HIS 48 -6.389 -6.373 1.898 1.00 0.00 N ATOM 338 CD2 HIS 48 -7.097 -7.647 0.250 1.00 0.00 C ATOM 339 CE1 HIS 48 -6.458 -7.663 2.271 1.00 0.00 C ATOM 340 NE2 HIS 48 -6.883 -8.433 1.287 1.00 0.00 N ATOM 341 N HIS 49 -4.944 -3.112 -2.582 1.00 0.00 N ATOM 342 CA HIS 49 -5.484 -2.126 -3.491 1.00 0.00 C ATOM 343 C HIS 49 -5.020 -0.736 -3.456 1.00 0.00 C ATOM 344 O HIS 49 -5.562 0.070 -4.207 1.00 0.00 O ATOM 345 CB HIS 49 -6.995 -1.985 -3.292 1.00 0.00 C ATOM 346 CG HIS 49 -7.763 -3.231 -3.603 1.00 0.00 C ATOM 347 ND1 HIS 49 -7.883 -3.732 -4.881 1.00 0.00 N ATOM 348 CD2 HIS 49 -8.528 -4.199 -2.831 1.00 0.00 C ATOM 349 CE1 HIS 49 -8.628 -4.852 -4.844 1.00 0.00 C ATOM 350 NE2 HIS 49 -9.017 -5.138 -3.617 1.00 0.00 N ATOM 351 N LYS 50 -4.148 -0.405 -2.483 1.00 0.00 N ATOM 352 CA LYS 50 -4.068 0.922 -1.944 1.00 0.00 C ATOM 353 C LYS 50 -5.337 1.441 -1.300 1.00 0.00 C ATOM 354 O LYS 50 -5.412 2.648 -1.084 1.00 0.00 O ATOM 355 CB LYS 50 -3.718 1.927 -3.043 1.00 0.00 C ATOM 356 CG LYS 50 -2.350 1.709 -3.670 1.00 0.00 C ATOM 357 CD LYS 50 -2.063 2.746 -4.743 1.00 0.00 C ATOM 358 CE LYS 50 -0.752 2.457 -5.454 1.00 0.00 C ATOM 359 NZ LYS 50 -0.482 3.436 -6.543 1.00 0.00 N ATOM 360 N TRP 51 -6.349 0.613 -0.948 1.00 0.00 N ATOM 361 CA TRP 51 -7.618 1.173 -0.550 1.00 0.00 C ATOM 362 C TRP 51 -8.270 0.228 0.422 1.00 0.00 C ATOM 363 O TRP 51 -9.195 -0.490 0.051 1.00 0.00 O ATOM 364 CB TRP 51 -8.526 1.362 -1.767 1.00 0.00 C ATOM 365 CG TRP 51 -9.804 2.079 -1.456 1.00 0.00 C ATOM 366 CD1 TRP 51 -11.057 1.538 -1.408 1.00 0.00 C ATOM 367 CD2 TRP 51 -9.954 3.470 -1.149 1.00 0.00 C ATOM 368 NE1 TRP 51 -11.979 2.506 -1.090 1.00 0.00 N ATOM 369 CE2 TRP 51 -11.326 3.702 -0.927 1.00 0.00 C ATOM 370 CE3 TRP 51 -9.064 4.543 -1.041 1.00 0.00 C ATOM 371 CZ2 TRP 51 -11.828 4.961 -0.603 1.00 0.00 C ATOM 372 CZ3 TRP 51 -9.566 5.789 -0.719 1.00 0.00 C ATOM 373 CH2 TRP 51 -10.933 5.992 -0.503 1.00 0.00 H ATOM 374 N VAL 52 -7.851 0.264 1.704 1.00 0.00 N ATOM 375 CA VAL 52 -8.369 -0.684 2.660 1.00 0.00 C ATOM 376 C VAL 52 -9.203 0.242 3.479 1.00 0.00 C ATOM 377 O VAL 52 -8.796 1.375 3.745 1.00 0.00 O ATOM 378 CB VAL 52 -7.237 -1.364 3.452 1.00 0.00 C ATOM 379 CG1 VAL 52 -7.811 -2.310 4.495 1.00 0.00 C ATOM 380 CG2 VAL 52 -6.340 -2.163 2.520 1.00 0.00 C ATOM 381 N ILE 53 -10.393 -0.233 3.869 1.00 0.00 N ATOM 382 CA ILE 53 -11.426 0.596 4.393 1.00 0.00 C ATOM 383 C ILE 53 -11.852 -0.290 5.526 1.00 0.00 C ATOM 384 O ILE 53 -11.023 -0.981 6.118 1.00 0.00 O ATOM 385 CB ILE 53 -12.526 0.855 3.348 1.00 0.00 C ATOM 386 CG1 ILE 53 -13.160 -0.464 2.900 1.00 0.00 C ATOM 387 CG2 ILE 53 -11.946 1.550 2.125 1.00 0.00 C ATOM 388 CD1 ILE 53 -14.395 -0.291 2.045 1.00 0.00 C ATOM 389 N GLN 54 -13.161 -0.318 5.801 1.00 0.00 N ATOM 390 CA GLN 54 -13.739 -1.131 6.812 1.00 0.00 C ATOM 391 C GLN 54 -13.632 -2.563 6.371 1.00 0.00 C ATOM 392 O GLN 54 -13.157 -3.374 7.157 1.00 0.00 O ATOM 393 CB GLN 54 -15.209 -0.763 7.021 1.00 0.00 C ATOM 394 CG GLN 54 -15.423 0.598 7.662 1.00 0.00 C ATOM 395 CD GLN 54 -16.886 0.993 7.718 1.00 0.00 C ATOM 396 OE1 GLN 54 -17.748 0.296 7.182 1.00 0.00 O ATOM 397 NE2 GLN 54 -17.171 2.114 8.371 1.00 0.00 N ATOM 398 N GLU 55 -14.039 -2.926 5.134 1.00 0.00 N ATOM 399 CA GLU 55 -14.486 -4.281 4.920 1.00 0.00 C ATOM 400 C GLU 55 -13.465 -5.054 4.119 1.00 0.00 C ATOM 401 O GLU 55 -13.832 -6.037 3.478 1.00 0.00 O ATOM 402 CB GLU 55 -15.812 -4.294 4.157 1.00 0.00 C ATOM 403 CG GLU 55 -16.955 -3.604 4.884 1.00 0.00 C ATOM 404 CD GLU 55 -18.255 -3.656 4.108 1.00 0.00 C ATOM 405 OE1 GLU 55 -18.276 -4.274 3.024 1.00 0.00 O ATOM 406 OE2 GLU 55 -19.255 -3.076 4.585 1.00 0.00 O ATOM 407 N GLU 56 -12.163 -4.667 4.129 1.00 0.00 N ATOM 408 CA GLU 56 -11.241 -5.287 3.206 1.00 0.00 C ATOM 409 C GLU 56 -10.308 -6.280 3.861 1.00 0.00 C ATOM 410 O GLU 56 -9.732 -7.106 3.157 1.00 0.00 O ATOM 411 CB GLU 56 -10.363 -4.230 2.534 1.00 0.00 C ATOM 412 CG GLU 56 -11.137 -3.198 1.731 1.00 0.00 C ATOM 413 CD GLU 56 -11.716 -3.769 0.452 1.00 0.00 C ATOM 414 OE1 GLU 56 -11.312 -4.886 0.065 1.00 0.00 O ATOM 415 OE2 GLU 56 -12.572 -3.100 -0.164 1.00 0.00 O ATOM 416 N ILE 57 -10.161 -6.279 5.204 1.00 0.00 N ATOM 417 CA ILE 57 -9.192 -7.182 5.801 1.00 0.00 C ATOM 418 C ILE 57 -10.044 -8.413 5.934 1.00 0.00 C ATOM 419 O ILE 57 -11.257 -8.300 6.100 1.00 0.00 O ATOM 420 CB ILE 57 -8.676 -6.646 7.149 1.00 0.00 C ATOM 421 CG1 ILE 57 -7.913 -5.335 6.945 1.00 0.00 C ATOM 422 CG2 ILE 57 -7.739 -7.653 7.799 1.00 0.00 C ATOM 423 CD1 ILE 57 -7.641 -4.581 8.229 1.00 0.00 C ATOM 424 N LYS 58 -9.429 -9.616 5.874 1.00 0.00 N ATOM 425 CA LYS 58 -10.112 -10.884 5.811 1.00 0.00 C ATOM 426 C LYS 58 -10.948 -11.098 7.045 1.00 0.00 C ATOM 427 O LYS 58 -11.912 -11.864 7.014 1.00 0.00 O ATOM 428 CB LYS 58 -9.104 -12.031 5.706 1.00 0.00 C ATOM 429 CG LYS 58 -9.738 -13.400 5.528 1.00 0.00 C ATOM 430 CD LYS 58 -8.684 -14.472 5.304 1.00 0.00 C ATOM 431 CE LYS 58 -9.318 -15.845 5.146 1.00 0.00 C ATOM 432 NZ LYS 58 -8.297 -16.904 4.917 1.00 0.00 N ATOM 433 N ASP 59 -10.593 -10.425 8.151 1.00 0.00 N ATOM 434 CA ASP 59 -11.097 -10.766 9.444 1.00 0.00 C ATOM 435 C ASP 59 -12.312 -9.925 9.669 1.00 0.00 C ATOM 436 O ASP 59 -13.217 -10.346 10.389 1.00 0.00 O ATOM 437 CB ASP 59 -10.048 -10.482 10.520 1.00 0.00 C ATOM 438 CG ASP 59 -8.816 -11.353 10.376 1.00 0.00 C ATOM 439 OD1 ASP 59 -8.965 -12.592 10.338 1.00 0.00 O ATOM 440 OD2 ASP 59 -7.701 -10.796 10.302 1.00 0.00 O ATOM 441 N ALA 60 -12.378 -8.715 9.069 1.00 0.00 N ATOM 442 CA ALA 60 -13.397 -7.772 9.449 1.00 0.00 C ATOM 443 C ALA 60 -13.214 -6.584 8.559 1.00 0.00 C ATOM 444 O ALA 60 -12.102 -6.356 8.092 1.00 0.00 O ATOM 445 CB ALA 60 -13.238 -7.380 10.910 1.00 0.00 C ATOM 446 N GLY 61 -14.228 -5.723 8.326 1.00 0.00 N ATOM 447 CA GLY 61 -15.603 -5.807 8.700 1.00 0.00 C ATOM 448 C GLY 61 -15.874 -4.528 9.433 1.00 0.00 C ATOM 449 O GLY 61 -16.892 -3.878 9.200 1.00 0.00 O ATOM 450 N ASP 62 -14.968 -4.139 10.354 1.00 0.00 N ATOM 451 CA ASP 62 -15.289 -3.165 11.365 1.00 0.00 C ATOM 452 C ASP 62 -13.978 -2.851 11.999 1.00 0.00 C ATOM 453 O ASP 62 -13.569 -3.512 12.952 1.00 0.00 O ATOM 454 CB ASP 62 -16.277 -3.749 12.377 1.00 0.00 C ATOM 455 CG ASP 62 -16.755 -2.721 13.384 1.00 0.00 C ATOM 456 OD1 ASP 62 -16.212 -1.597 13.388 1.00 0.00 O ATOM 457 OD2 ASP 62 -17.672 -3.041 14.169 1.00 0.00 O ATOM 458 N LYS 63 -13.269 -1.847 11.423 1.00 0.00 N ATOM 459 CA LYS 63 -12.215 -1.060 12.028 1.00 0.00 C ATOM 460 C LYS 63 -10.942 -1.853 11.925 1.00 0.00 C ATOM 461 O LYS 63 -10.850 -2.767 11.108 1.00 0.00 O ATOM 462 CB LYS 63 -12.536 -0.775 13.496 1.00 0.00 C ATOM 463 CG LYS 63 -13.767 0.092 13.706 1.00 0.00 C ATOM 464 CD LYS 63 -13.993 0.382 15.181 1.00 0.00 C ATOM 465 CE LYS 63 -15.245 1.218 15.394 1.00 0.00 C ATOM 466 NZ LYS 63 -15.481 1.506 16.835 1.00 0.00 N ATOM 467 N THR 64 -9.947 -1.535 12.776 1.00 0.00 N ATOM 468 CA THR 64 -8.604 -1.986 12.547 1.00 0.00 C ATOM 469 C THR 64 -8.530 -2.948 13.699 1.00 0.00 C ATOM 470 O THR 64 -9.411 -2.943 14.563 1.00 0.00 O ATOM 471 CB THR 64 -7.598 -0.823 12.618 1.00 0.00 C ATOM 472 OG1 THR 64 -7.585 -0.279 13.944 1.00 0.00 O ATOM 473 CG2 THR 64 -7.983 0.275 11.639 1.00 0.00 C ATOM 474 N LEU 65 -7.459 -3.742 13.788 1.00 0.00 N ATOM 475 CA LEU 65 -7.486 -4.902 14.633 1.00 0.00 C ATOM 476 C LEU 65 -6.358 -4.526 15.554 1.00 0.00 C ATOM 477 O LEU 65 -5.574 -3.638 15.209 1.00 0.00 O ATOM 478 CB LEU 65 -7.236 -6.168 13.812 1.00 0.00 C ATOM 479 CG LEU 65 -8.227 -6.449 12.680 1.00 0.00 C ATOM 480 CD1 LEU 65 -7.789 -7.660 11.870 1.00 0.00 C ATOM 481 CD2 LEU 65 -9.615 -6.725 13.236 1.00 0.00 C ATOM 482 N GLN 66 -6.296 -5.154 16.750 1.00 0.00 N ATOM 483 CA GLN 66 -5.551 -4.695 17.898 1.00 0.00 C ATOM 484 C GLN 66 -4.082 -4.964 17.654 1.00 0.00 C ATOM 485 O GLN 66 -3.769 -5.892 16.913 1.00 0.00 O ATOM 486 CB GLN 66 -6.001 -5.434 19.160 1.00 0.00 C ATOM 487 CG GLN 66 -7.466 -5.225 19.511 1.00 0.00 C ATOM 488 CD GLN 66 -7.790 -3.778 19.821 1.00 0.00 C ATOM 489 OE1 GLN 66 -7.156 -3.158 20.676 1.00 0.00 O ATOM 490 NE2 GLN 66 -8.780 -3.232 19.124 1.00 0.00 N ATOM 491 N PRO 67 -3.160 -4.195 18.226 1.00 0.00 N ATOM 492 CA PRO 67 -1.736 -4.321 17.922 1.00 0.00 C ATOM 493 C PRO 67 -1.218 -5.647 18.395 1.00 0.00 C ATOM 494 O PRO 67 -1.476 -6.014 19.542 1.00 0.00 O ATOM 495 CB PRO 67 -1.092 -3.157 18.677 1.00 0.00 C ATOM 496 CG PRO 67 -2.037 -2.869 19.795 1.00 0.00 C ATOM 497 CD PRO 67 -3.410 -3.184 19.272 1.00 0.00 C ATOM 498 N GLY 68 -0.439 -6.336 17.544 1.00 0.00 N ATOM 499 CA GLY 68 0.310 -7.482 17.975 1.00 0.00 C ATOM 500 C GLY 68 -0.406 -8.770 17.688 1.00 0.00 C ATOM 501 O GLY 68 0.122 -9.836 17.995 1.00 0.00 O ATOM 502 N ASP 69 -1.609 -8.730 17.091 1.00 0.00 N ATOM 503 CA ASP 69 -2.435 -9.916 17.063 1.00 0.00 C ATOM 504 C ASP 69 -2.305 -10.412 15.651 1.00 0.00 C ATOM 505 O ASP 69 -1.879 -9.656 14.776 1.00 0.00 O ATOM 506 CB ASP 69 -3.884 -9.568 17.411 1.00 0.00 C ATOM 507 CG ASP 69 -4.060 -9.203 18.871 1.00 0.00 C ATOM 508 OD1 ASP 69 -3.117 -9.427 19.658 1.00 0.00 O ATOM 509 OD2 ASP 69 -5.143 -8.692 19.229 1.00 0.00 O ATOM 510 N GLN 70 -2.667 -11.685 15.394 1.00 0.00 N ATOM 511 CA GLN 70 -2.205 -12.451 14.265 1.00 0.00 C ATOM 512 C GLN 70 -3.281 -12.259 13.236 1.00 0.00 C ATOM 513 O GLN 70 -4.457 -12.345 13.584 1.00 0.00 O ATOM 514 CB GLN 70 -2.042 -13.924 14.646 1.00 0.00 C ATOM 515 CG GLN 70 -1.023 -14.170 15.747 1.00 0.00 C ATOM 516 CD GLN 70 0.389 -13.813 15.325 1.00 0.00 C ATOM 517 OE1 GLN 70 0.850 -14.221 14.258 1.00 0.00 O ATOM 518 NE2 GLN 70 1.081 -13.048 16.162 1.00 0.00 N ATOM 519 N VAL 71 -2.902 -12.009 11.952 1.00 0.00 N ATOM 520 CA VAL 71 -3.809 -11.733 10.859 1.00 0.00 C ATOM 521 C VAL 71 -3.298 -12.530 9.674 1.00 0.00 C ATOM 522 O VAL 71 -2.122 -12.884 9.630 1.00 0.00 O ATOM 523 CB VAL 71 -3.838 -10.232 10.515 1.00 0.00 C ATOM 524 CG1 VAL 71 -4.352 -9.426 11.699 1.00 0.00 C ATOM 525 CG2 VAL 71 -2.444 -9.738 10.165 1.00 0.00 C ATOM 526 N ILE 72 -4.177 -12.831 8.685 1.00 0.00 N ATOM 527 CA ILE 72 -3.846 -13.573 7.491 1.00 0.00 C ATOM 528 C ILE 72 -3.860 -12.519 6.415 1.00 0.00 C ATOM 529 O ILE 72 -4.828 -11.767 6.303 1.00 0.00 O ATOM 530 CB ILE 72 -4.877 -14.683 7.212 1.00 0.00 C ATOM 531 CG1 ILE 72 -4.907 -15.686 8.368 1.00 0.00 C ATOM 532 CG2 ILE 72 -4.524 -15.430 5.935 1.00 0.00 C ATOM 533 CD1 ILE 72 -6.047 -16.677 8.287 1.00 0.00 C ATOM 534 N LEU 73 -2.782 -12.451 5.598 1.00 0.00 N ATOM 535 CA LEU 73 -2.588 -11.435 4.599 1.00 0.00 C ATOM 536 C LEU 73 -2.997 -11.935 3.252 1.00 0.00 C ATOM 537 O LEU 73 -2.703 -13.073 2.876 1.00 0.00 O ATOM 538 CB LEU 73 -1.117 -11.021 4.533 1.00 0.00 C ATOM 539 CG LEU 73 -0.767 -9.914 3.536 1.00 0.00 C ATOM 540 CD1 LEU 73 -1.394 -8.593 3.959 1.00 0.00 C ATOM 541 CD2 LEU 73 0.739 -9.720 3.454 1.00 0.00 C ATOM 542 N GLU 74 -3.623 -11.022 2.484 1.00 0.00 N ATOM 543 CA GLU 74 -3.911 -11.228 1.092 1.00 0.00 C ATOM 544 C GLU 74 -3.113 -10.195 0.402 1.00 0.00 C ATOM 545 O GLU 74 -3.159 -9.000 0.668 1.00 0.00 O ATOM 546 CB GLU 74 -5.408 -11.058 0.824 1.00 0.00 C ATOM 547 CG GLU 74 -6.285 -12.072 1.539 1.00 0.00 C ATOM 548 CD GLU 74 -7.764 -11.793 1.358 1.00 0.00 C ATOM 549 OE1 GLU 74 -8.102 -10.786 0.700 1.00 0.00 O ATOM 550 OE2 GLU 74 -8.585 -12.580 1.875 1.00 0.00 O ATOM 551 N HIS 77 -0.995 -11.823 -0.586 1.00 0.00 N ATOM 552 CA HIS 77 -0.155 -10.712 -0.853 1.00 0.00 C ATOM 553 C HIS 77 -0.595 -10.303 -2.229 1.00 0.00 C ATOM 554 O HIS 77 -1.282 -11.091 -2.867 1.00 0.00 O ATOM 555 CB HIS 77 1.316 -11.130 -0.808 1.00 0.00 C ATOM 556 CG HIS 77 2.274 -9.988 -0.943 1.00 0.00 C ATOM 557 ND1 HIS 77 2.459 -9.050 0.051 1.00 0.00 N ATOM 558 CD2 HIS 77 3.194 -9.519 -1.970 1.00 0.00 C ATOM 559 CE1 HIS 77 3.374 -8.154 -0.359 1.00 0.00 C ATOM 560 NE2 HIS 77 3.819 -8.429 -1.569 1.00 0.00 N ATOM 561 N MET 78 -0.292 -9.063 -2.703 1.00 0.00 N ATOM 562 CA MET 78 -0.364 -8.643 -4.092 1.00 0.00 C ATOM 563 C MET 78 -0.089 -9.666 -5.158 1.00 0.00 C ATOM 564 O MET 78 -0.678 -9.593 -6.234 1.00 0.00 O ATOM 565 CB MET 78 0.648 -7.529 -4.367 1.00 0.00 C ATOM 566 CG MET 78 0.329 -6.215 -3.673 1.00 0.00 C ATOM 567 SD MET 78 1.478 -4.898 -4.113 1.00 0.00 S ATOM 568 CE MET 78 2.943 -5.413 -3.220 1.00 0.00 C ATOM 569 N LYS 79 0.804 -10.634 -4.890 1.00 0.00 N ATOM 570 CA LYS 79 1.113 -11.730 -5.772 1.00 0.00 C ATOM 571 C LYS 79 -0.054 -12.654 -5.981 1.00 0.00 C ATOM 572 O LYS 79 0.034 -13.546 -6.823 1.00 0.00 O ATOM 573 CB LYS 79 2.260 -12.568 -5.204 1.00 0.00 C ATOM 574 CG LYS 79 3.595 -11.841 -5.158 1.00 0.00 C ATOM 575 CD LYS 79 4.690 -12.733 -4.593 1.00 0.00 C ATOM 576 CE LYS 79 6.026 -12.010 -4.557 1.00 0.00 C ATOM 577 NZ LYS 79 7.105 -12.868 -3.996 1.00 0.00 N ATOM 578 N GLY 80 -1.139 -12.502 -5.204 1.00 0.00 N ATOM 579 CA GLY 80 -2.269 -13.370 -5.236 1.00 0.00 C ATOM 580 C GLY 80 -2.160 -14.377 -4.125 1.00 0.00 C ATOM 581 O GLY 80 -2.904 -15.355 -4.138 1.00 0.00 O ATOM 582 N MET 81 -1.292 -14.173 -3.109 1.00 0.00 N ATOM 583 CA MET 81 -0.969 -15.300 -2.260 1.00 0.00 C ATOM 584 C MET 81 -1.758 -15.040 -1.017 1.00 0.00 C ATOM 585 O MET 81 -1.192 -14.667 0.007 1.00 0.00 O ATOM 586 CB MET 81 0.535 -15.349 -1.984 1.00 0.00 C ATOM 587 CG MET 81 1.387 -15.590 -3.218 1.00 0.00 C ATOM 588 SD MET 81 0.966 -17.126 -4.065 1.00 0.00 S ATOM 589 CE MET 81 1.573 -18.336 -2.892 1.00 0.00 C ATOM 590 N LYS 82 -3.089 -15.216 -1.083 1.00 0.00 N ATOM 591 CA LYS 82 -3.950 -15.146 0.060 1.00 0.00 C ATOM 592 C LYS 82 -3.653 -16.280 1.000 1.00 0.00 C ATOM 593 O LYS 82 -4.089 -17.414 0.794 1.00 0.00 O ATOM 594 CB LYS 82 -5.416 -15.235 -0.368 1.00 0.00 C ATOM 595 CG LYS 82 -6.406 -15.087 0.777 1.00 0.00 C ATOM 596 CD LYS 82 -7.835 -15.016 0.264 1.00 0.00 C ATOM 597 CE LYS 82 -8.830 -14.925 1.410 1.00 0.00 C ATOM 598 NZ LYS 82 -10.232 -14.823 0.923 1.00 0.00 N ATOM 599 N GLY 83 -2.890 -15.981 2.081 1.00 0.00 N ATOM 600 CA GLY 83 -2.614 -16.967 3.081 1.00 0.00 C ATOM 601 C GLY 83 -1.370 -16.643 3.869 1.00 0.00 C ATOM 602 O GLY 83 -0.856 -17.526 4.553 1.00 0.00 O ATOM 603 N ALA 84 -0.853 -15.401 3.831 1.00 0.00 N ATOM 604 CA ALA 84 0.510 -15.200 4.265 1.00 0.00 C ATOM 605 C ALA 84 0.338 -14.652 5.653 1.00 0.00 C ATOM 606 O ALA 84 -0.243 -13.589 5.778 1.00 0.00 O ATOM 607 CB ALA 84 1.222 -14.223 3.341 1.00 0.00 C ATOM 608 N THR 85 0.741 -15.358 6.738 1.00 0.00 N ATOM 609 CA THR 85 0.553 -14.856 8.079 1.00 0.00 C ATOM 610 C THR 85 1.324 -13.597 8.409 1.00 0.00 C ATOM 611 O THR 85 2.475 -13.450 8.000 1.00 0.00 O ATOM 612 CB THR 85 0.987 -15.889 9.134 1.00 0.00 C ATOM 613 OG1 THR 85 0.232 -17.095 8.967 1.00 0.00 O ATOM 614 CG2 THR 85 0.750 -15.351 10.537 1.00 0.00 C ATOM 615 N ALA 86 0.689 -12.676 9.186 1.00 0.00 N ATOM 616 CA ALA 86 1.266 -11.415 9.565 1.00 0.00 C ATOM 617 C ALA 86 0.838 -11.065 10.970 1.00 0.00 C ATOM 618 O ALA 86 -0.060 -11.708 11.509 1.00 0.00 O ATOM 619 CB ALA 86 0.805 -10.316 8.621 1.00 0.00 C ATOM 620 N GLU 87 1.479 -10.028 11.568 1.00 0.00 N ATOM 621 CA GLU 87 1.211 -9.471 12.874 1.00 0.00 C ATOM 622 C GLU 87 1.014 -8.003 12.596 1.00 0.00 C ATOM 623 O GLU 87 1.784 -7.445 11.821 1.00 0.00 O ATOM 624 CB GLU 87 2.391 -9.721 13.816 1.00 0.00 C ATOM 625 CG GLU 87 2.655 -11.190 14.102 1.00 0.00 C ATOM 626 CD GLU 87 3.830 -11.398 15.037 1.00 0.00 C ATOM 627 OE1 GLU 87 4.445 -10.393 15.452 1.00 0.00 O ATOM 628 OE2 GLU 87 4.135 -12.567 15.357 1.00 0.00 O ATOM 629 N ILE 88 -0.005 -7.348 13.201 1.00 0.00 N ATOM 630 CA ILE 88 -0.351 -5.987 12.847 1.00 0.00 C ATOM 631 C ILE 88 0.476 -5.103 13.720 1.00 0.00 C ATOM 632 O ILE 88 0.611 -5.360 14.916 1.00 0.00 O ATOM 633 CB ILE 88 -1.848 -5.707 13.077 1.00 0.00 C ATOM 634 CG1 ILE 88 -2.702 -6.598 12.173 1.00 0.00 C ATOM 635 CG2 ILE 88 -2.172 -4.254 12.765 1.00 0.00 C ATOM 636 CD1 ILE 88 -4.174 -6.585 12.519 1.00 0.00 C ATOM 637 N ASP 89 1.006 -4.012 13.115 1.00 0.00 N ATOM 638 CA ASP 89 1.799 -3.032 13.796 1.00 0.00 C ATOM 639 C ASP 89 1.015 -1.749 13.941 1.00 0.00 C ATOM 640 O ASP 89 0.790 -1.318 15.071 1.00 0.00 O ATOM 641 CB ASP 89 3.079 -2.740 13.012 1.00 0.00 C ATOM 642 CG ASP 89 3.956 -3.966 12.849 1.00 0.00 C ATOM 643 OD1 ASP 89 4.248 -4.626 13.869 1.00 0.00 O ATOM 644 OD2 ASP 89 4.350 -4.267 11.704 1.00 0.00 O ATOM 645 N SER 90 0.585 -1.083 12.830 1.00 0.00 N ATOM 646 CA SER 90 -0.098 0.198 12.943 1.00 0.00 C ATOM 647 C SER 90 -1.069 0.389 11.809 1.00 0.00 C ATOM 648 O SER 90 -1.032 -0.354 10.832 1.00 0.00 O ATOM 649 CB SER 90 0.911 1.347 12.908 1.00 0.00 C ATOM 650 OG SER 90 1.537 1.439 11.640 1.00 0.00 O ATOM 651 N ALA 91 -1.942 1.430 11.929 1.00 0.00 N ATOM 652 CA ALA 91 -2.666 2.003 10.812 1.00 0.00 C ATOM 653 C ALA 91 -2.346 3.481 10.710 1.00 0.00 C ATOM 654 O ALA 91 -2.390 4.172 11.729 1.00 0.00 O ATOM 655 CB ALA 91 -4.164 1.831 11.008 1.00 0.00 C ATOM 656 N GLU 92 -2.051 4.009 9.487 1.00 0.00 N ATOM 657 CA GLU 92 -1.613 5.380 9.282 1.00 0.00 C ATOM 658 C GLU 92 -2.412 6.027 8.165 1.00 0.00 C ATOM 659 O GLU 92 -2.396 5.548 7.037 1.00 0.00 O ATOM 660 CB GLU 92 -0.131 5.419 8.904 1.00 0.00 C ATOM 661 CG GLU 92 0.420 6.820 8.696 1.00 0.00 C ATOM 662 CD GLU 92 1.905 6.822 8.392 1.00 0.00 C ATOM 663 OE1 GLU 92 2.486 5.725 8.256 1.00 0.00 O ATOM 664 OE2 GLU 92 2.489 7.922 8.292 1.00 0.00 O ATOM 665 N LYS 93 -3.088 7.170 8.431 1.00 0.00 N ATOM 666 CA LYS 93 -3.852 7.881 7.418 1.00 0.00 C ATOM 667 C LYS 93 -3.017 8.894 6.656 1.00 0.00 C ATOM 668 O LYS 93 -2.402 9.768 7.267 1.00 0.00 O ATOM 669 CB LYS 93 -5.014 8.643 8.060 1.00 0.00 C ATOM 670 CG LYS 93 -6.091 7.749 8.651 1.00 0.00 C ATOM 671 CD LYS 93 -7.199 8.569 9.292 1.00 0.00 C ATOM 672 CE LYS 93 -8.270 7.674 9.895 1.00 0.00 C ATOM 673 NZ LYS 93 -9.351 8.464 10.548 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 478 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 68.56 59.2 120 95.2 126 ARMSMC SECONDARY STRUCTURE . . 57.52 71.2 52 100.0 52 ARMSMC SURFACE . . . . . . . . 74.86 52.6 76 92.7 82 ARMSMC BURIED . . . . . . . . 56.05 70.5 44 100.0 44 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.26 47.1 51 98.1 52 ARMSSC1 RELIABLE SIDE CHAINS . 84.83 43.5 46 97.9 47 ARMSSC1 SECONDARY STRUCTURE . . 83.49 47.8 23 100.0 23 ARMSSC1 SURFACE . . . . . . . . 83.79 47.1 34 97.1 35 ARMSSC1 BURIED . . . . . . . . 79.12 47.1 17 100.0 17 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.20 42.1 38 100.0 38 ARMSSC2 RELIABLE SIDE CHAINS . 77.33 46.9 32 100.0 32 ARMSSC2 SECONDARY STRUCTURE . . 94.75 40.0 15 100.0 15 ARMSSC2 SURFACE . . . . . . . . 82.04 44.4 27 100.0 27 ARMSSC2 BURIED . . . . . . . . 101.74 36.4 11 100.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.34 22.2 18 100.0 18 ARMSSC3 RELIABLE SIDE CHAINS . 83.97 28.6 14 100.0 14 ARMSSC3 SECONDARY STRUCTURE . . 59.11 25.0 4 100.0 4 ARMSSC3 SURFACE . . . . . . . . 92.08 26.7 15 100.0 15 ARMSSC3 BURIED . . . . . . . . 87.53 0.0 3 100.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 92.10 42.9 7 100.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 92.10 42.9 7 100.0 7 ARMSSC4 SECONDARY STRUCTURE . . 6.18 100.0 1 100.0 1 ARMSSC4 SURFACE . . . . . . . . 92.10 42.9 7 100.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.92 (Number of atoms: 62) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.92 62 96.9 64 CRMSCA CRN = ALL/NP . . . . . 0.0955 CRMSCA SECONDARY STRUCTURE . . 5.57 26 100.0 26 CRMSCA SURFACE . . . . . . . . 6.52 40 95.2 42 CRMSCA BURIED . . . . . . . . 4.66 22 100.0 22 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.94 304 96.8 314 CRMSMC SECONDARY STRUCTURE . . 5.65 130 100.0 130 CRMSMC SURFACE . . . . . . . . 6.55 195 95.1 205 CRMSMC BURIED . . . . . . . . 4.65 109 100.0 109 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.30 230 32.4 710 CRMSSC RELIABLE SIDE CHAINS . 6.84 194 28.8 674 CRMSSC SECONDARY STRUCTURE . . 7.57 107 34.3 312 CRMSSC SURFACE . . . . . . . . 7.91 154 33.2 464 CRMSSC BURIED . . . . . . . . 5.87 76 30.9 246 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.60 478 49.5 966 CRMSALL SECONDARY STRUCTURE . . 6.64 211 50.7 416 CRMSALL SURFACE . . . . . . . . 7.21 314 49.7 632 CRMSALL BURIED . . . . . . . . 5.24 164 49.1 334 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.940 1.000 0.500 62 96.9 64 ERRCA SECONDARY STRUCTURE . . 4.748 1.000 0.500 26 100.0 26 ERRCA SURFACE . . . . . . . . 5.429 1.000 0.500 40 95.2 42 ERRCA BURIED . . . . . . . . 4.050 1.000 0.500 22 100.0 22 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.970 1.000 0.500 304 96.8 314 ERRMC SECONDARY STRUCTURE . . 4.821 1.000 0.500 130 100.0 130 ERRMC SURFACE . . . . . . . . 5.482 1.000 0.500 195 95.1 205 ERRMC BURIED . . . . . . . . 4.054 1.000 0.500 109 100.0 109 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.220 1.000 0.500 230 32.4 710 ERRSC RELIABLE SIDE CHAINS . 5.900 1.000 0.500 194 28.8 674 ERRSC SECONDARY STRUCTURE . . 6.444 1.000 0.500 107 34.3 312 ERRSC SURFACE . . . . . . . . 6.766 1.000 0.500 154 33.2 464 ERRSC BURIED . . . . . . . . 5.113 1.000 0.500 76 30.9 246 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.554 1.000 0.500 478 49.5 966 ERRALL SECONDARY STRUCTURE . . 5.604 1.000 0.500 211 50.7 416 ERRALL SURFACE . . . . . . . . 6.085 1.000 0.500 314 49.7 632 ERRALL BURIED . . . . . . . . 4.538 1.000 0.500 164 49.1 334 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 7 18 41 52 62 64 DISTCA CA (P) 0.00 10.94 28.12 64.06 81.25 64 DISTCA CA (RMS) 0.00 1.61 2.11 3.10 4.09 DISTCA ALL (N) 5 40 119 282 400 478 966 DISTALL ALL (P) 0.52 4.14 12.32 29.19 41.41 966 DISTALL ALL (RMS) 0.70 1.54 2.23 3.25 4.78 DISTALL END of the results output