####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 106 ( 424), selected 106 , name T0578AL396_1-D1 # Molecule2: number of CA atoms 148 ( 1227), selected 106 , name T0578-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0578AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 111 - 144 4.75 21.87 LCS_AVERAGE: 13.63 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 114 - 128 1.95 23.45 LONGEST_CONTINUOUS_SEGMENT: 13 115 - 129 1.64 24.16 LCS_AVERAGE: 5.35 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 119 - 128 0.66 25.10 LCS_AVERAGE: 3.67 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 106 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 9 M 9 3 3 13 0 3 3 3 4 5 5 6 7 10 10 11 13 15 18 19 23 27 27 28 LCS_GDT L 10 L 10 3 3 17 0 3 3 3 3 3 5 5 7 11 15 19 20 24 24 25 26 27 27 29 LCS_GDT T 11 T 11 3 3 17 0 3 3 3 3 3 5 7 9 13 15 19 20 24 24 25 26 27 27 29 LCS_GDT Y 12 Y 12 3 3 17 0 3 3 3 4 5 7 8 11 13 15 19 20 24 24 25 27 28 30 33 LCS_GDT L 13 L 13 3 4 17 1 3 3 5 5 7 8 9 11 13 15 19 20 24 24 25 27 32 33 39 LCS_GDT E 14 E 14 3 4 17 3 3 3 5 5 7 8 9 11 13 15 19 20 24 26 28 31 35 36 39 LCS_GDT E 15 E 15 7 9 17 6 7 7 8 8 9 11 11 13 14 17 22 29 31 33 35 40 44 45 47 LCS_GDT Q 16 Q 16 7 9 17 6 7 7 8 8 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT L 17 L 17 7 9 17 6 7 7 8 8 9 11 17 18 21 25 29 32 35 36 39 42 44 45 47 LCS_GDT E 18 E 18 7 9 17 6 7 7 8 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT K 19 K 19 7 9 17 6 7 7 8 8 11 13 14 18 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT H 20 H 20 7 9 17 6 7 7 8 10 11 13 17 19 20 25 29 32 35 36 39 42 44 45 47 LCS_GDT L 21 L 21 7 9 17 4 7 7 8 10 12 14 17 19 20 25 29 32 35 36 39 42 44 45 47 LCS_GDT G 22 G 22 5 9 17 4 4 5 8 8 9 11 14 17 18 25 29 32 35 36 39 42 44 45 47 LCS_GDT D 23 D 23 5 9 17 4 4 5 6 8 9 11 11 11 13 15 19 22 25 27 29 34 39 44 46 LCS_GDT Y 24 Y 24 5 8 17 4 4 5 6 8 9 11 11 11 14 16 19 22 27 31 34 36 41 44 46 LCS_GDT E 25 E 25 5 8 17 3 3 5 5 8 9 11 17 19 19 22 27 30 34 36 39 41 43 44 47 LCS_GDT V 26 V 26 3 3 17 3 3 3 6 7 12 12 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT G 27 G 27 3 3 17 0 3 3 8 8 9 10 16 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT L 28 L 28 3 7 16 3 3 6 7 9 12 14 16 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT D 29 D 29 3 9 16 3 3 6 7 9 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT W 30 W 30 6 9 16 3 5 8 8 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT D 31 D 31 6 9 16 3 5 6 7 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT R 32 R 32 6 9 16 3 5 6 7 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT K 33 K 33 6 9 16 3 5 6 7 9 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT N 34 N 34 6 9 16 3 5 6 7 9 11 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT H 35 H 35 6 9 16 3 5 6 7 9 11 16 17 19 22 24 29 32 35 36 39 42 44 45 47 LCS_GDT T 36 T 36 7 9 16 3 5 7 7 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT I 37 I 37 7 9 16 3 6 7 7 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT E 38 E 38 7 9 16 3 6 7 7 9 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT V 39 V 39 7 9 16 4 6 7 7 8 11 13 16 19 22 24 29 32 35 36 39 42 44 45 47 LCS_GDT I 40 I 40 7 9 16 4 6 7 8 11 13 17 18 22 27 29 32 32 33 36 39 42 44 45 47 LCS_GDT V 41 V 41 7 9 16 4 6 7 7 9 10 15 16 19 24 29 32 32 33 36 37 42 44 45 47 LCS_GDT R 42 R 42 7 9 16 4 6 7 7 8 13 14 15 16 18 19 24 26 33 34 35 39 43 44 45 LCS_GDT E 46 E 46 4 4 16 3 3 4 4 4 5 6 6 7 10 10 16 21 25 29 31 32 33 37 39 LCS_GDT N 47 N 47 4 4 12 3 3 4 4 4 4 6 6 7 10 10 15 15 18 20 24 28 30 33 35 LCS_GDT N 48 N 48 4 7 11 3 3 4 5 5 6 8 9 9 10 10 11 12 14 15 16 17 22 28 29 LCS_GDT E 49 E 49 4 7 11 3 3 4 6 7 8 10 10 10 11 11 12 13 14 15 16 19 20 23 24 LCS_GDT Q 50 Q 50 4 7 11 3 3 4 6 7 8 10 10 10 11 11 13 15 15 17 18 19 23 25 25 LCS_GDT V 51 V 51 5 7 11 3 4 6 6 7 8 10 10 10 11 11 12 13 14 15 16 19 22 23 25 LCS_GDT A 52 A 52 5 7 11 4 4 6 6 7 8 10 10 10 11 11 12 13 14 15 16 17 18 19 20 LCS_GDT I 53 I 53 5 7 11 4 4 6 6 7 8 10 10 10 11 11 12 13 14 15 16 17 18 19 23 LCS_GDT D 54 D 54 5 7 11 4 4 6 6 7 8 10 10 10 11 11 12 13 14 15 16 17 18 19 20 LCS_GDT D 55 D 55 5 7 11 3 3 5 5 7 7 10 10 10 11 11 12 13 14 15 16 17 18 20 22 LCS_GDT V 56 V 56 3 3 11 0 3 3 3 3 4 4 5 5 5 6 19 20 24 24 25 26 29 31 33 LCS_GDT E 64 E 64 3 3 11 0 3 3 4 5 7 8 9 9 13 13 15 20 24 25 29 32 34 35 36 LCS_GDT F 65 F 65 3 3 11 0 3 3 3 4 4 7 15 15 17 21 24 26 30 32 35 35 35 36 37 LCS_GDT I 66 I 66 3 3 3 0 3 5 6 6 6 14 15 15 17 21 24 26 32 34 35 35 35 36 38 LCS_GDT I 91 I 91 4 6 7 3 3 4 6 8 8 9 10 12 14 16 17 19 21 22 28 32 32 35 37 LCS_GDT P 92 P 92 4 6 7 3 3 4 6 8 8 9 10 12 14 16 17 18 20 21 23 26 28 33 35 LCS_GDT Y 93 Y 93 4 6 7 3 3 4 6 8 8 9 10 12 14 16 17 18 20 21 25 26 28 33 35 LCS_GDT E 94 E 94 4 6 7 3 3 4 6 8 8 9 10 12 14 16 17 20 24 24 25 26 28 32 35 LCS_GDT G 95 G 95 3 6 7 3 3 4 5 8 8 9 10 12 14 16 19 20 24 24 25 26 28 33 35 LCS_GDT K 96 K 96 3 6 7 1 3 4 6 8 8 9 10 12 14 16 17 20 24 24 25 26 28 33 35 LCS_GDT K 97 K 97 3 6 7 0 3 3 5 5 6 6 7 9 12 13 14 17 21 23 24 24 27 30 32 LCS_GDT L 111 L 111 3 3 32 0 3 3 7 8 10 12 14 16 25 28 32 32 33 34 37 42 44 45 47 LCS_GDT K 112 K 112 3 3 32 0 3 4 7 8 13 14 15 16 23 28 32 32 33 34 35 35 38 44 46 LCS_GDT V 113 V 113 3 3 32 0 3 4 7 8 13 14 16 21 26 29 32 32 33 34 35 35 38 41 46 LCS_GDT V 114 V 114 3 13 32 0 3 4 6 10 11 14 17 21 27 29 32 32 33 34 35 35 38 43 46 LCS_GDT L 115 L 115 4 13 32 1 4 8 11 12 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT D 116 D 116 4 13 32 0 3 4 9 12 13 15 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT Q 119 Q 119 10 13 32 6 9 10 11 12 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT S 120 S 120 10 13 32 6 9 10 11 12 13 14 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT D 121 D 121 10 13 32 6 9 10 11 12 13 14 16 21 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT L 122 L 122 10 13 32 6 9 10 11 12 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT L 123 L 123 10 13 32 6 9 10 11 12 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT D 124 D 124 10 13 32 6 9 10 11 12 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT F 125 F 125 10 13 32 4 9 10 11 12 13 14 17 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT L 126 L 126 10 13 32 4 9 10 11 12 13 15 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT S 127 S 127 10 13 32 3 9 10 11 12 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT D 128 D 128 10 13 32 3 8 10 11 12 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT E 129 E 129 6 13 32 3 4 6 9 11 13 14 16 21 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT T 130 T 130 4 9 32 3 4 6 8 9 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT A 131 A 131 5 9 32 5 5 6 8 9 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT E 132 E 132 5 9 32 5 5 6 8 9 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT V 133 V 133 5 9 32 5 5 6 8 9 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT F 134 F 134 5 9 32 5 5 6 8 9 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT E 135 E 135 6 9 32 5 5 8 8 9 13 15 17 21 26 29 32 32 33 34 35 35 38 39 40 LCS_GDT L 136 L 136 6 9 32 4 5 8 8 9 13 17 18 22 27 29 32 32 33 34 35 35 38 39 40 LCS_GDT H 137 H 137 6 9 32 4 5 8 8 9 13 17 18 22 27 29 32 32 33 34 35 36 38 41 43 LCS_GDT W 138 W 138 6 9 32 4 5 8 8 8 13 17 18 22 27 29 32 32 34 36 39 42 44 45 47 LCS_GDT E 139 E 139 6 8 32 3 5 8 8 9 11 17 18 22 27 29 32 32 35 36 39 42 44 45 47 LCS_GDT P 140 P 140 6 8 32 3 5 8 8 10 12 16 18 22 27 29 32 32 35 36 39 42 44 45 47 LCS_GDT A 141 A 141 4 6 32 3 4 4 5 6 8 8 11 14 14 16 20 25 31 33 35 39 43 45 47 LCS_GDT D 142 D 142 4 6 32 3 4 4 6 10 11 14 17 21 27 29 32 32 33 34 35 35 38 44 46 LCS_GDT F 143 F 143 4 5 32 3 4 8 8 8 13 15 18 21 27 29 32 32 33 36 38 42 44 45 47 LCS_GDT E 144 E 144 3 5 32 1 3 3 5 5 5 7 10 12 15 23 25 32 35 36 39 42 44 45 47 LCS_GDT A 145 A 145 3 3 30 0 3 3 5 5 5 7 7 9 13 16 22 23 30 35 39 41 44 45 47 LCS_GDT M 146 M 146 3 3 18 1 3 4 5 5 6 7 10 18 21 23 28 32 35 36 39 42 44 45 47 LCS_GDT I 147 I 147 3 4 18 1 3 4 5 8 8 11 16 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT K 148 K 148 3 4 18 3 3 3 3 8 8 9 15 18 20 22 25 32 35 36 39 42 44 45 47 LCS_GDT K 149 K 149 5 5 18 3 4 5 5 5 6 13 17 19 20 22 25 31 35 36 39 42 44 45 47 LCS_GDT V 150 V 150 5 5 18 3 4 10 10 10 12 14 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT A 151 A 151 5 5 18 3 4 5 5 5 7 13 14 15 19 21 25 28 30 32 36 37 42 45 47 LCS_GDT E 152 E 152 5 5 18 3 8 10 10 10 12 14 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT T 153 T 153 5 11 18 3 4 5 8 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT E 154 E 154 3 11 18 3 3 4 6 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT K 155 K 155 8 11 18 4 8 10 10 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT E 156 E 156 8 11 18 4 8 10 10 10 12 16 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT Q 157 Q 157 8 11 18 4 8 10 10 10 12 14 17 19 22 25 29 32 35 36 39 42 44 45 47 LCS_GDT W 158 W 158 8 11 18 4 8 10 10 10 12 14 17 19 22 25 28 31 33 36 39 42 44 45 47 LCS_GDT I 159 I 159 8 11 18 4 7 10 10 10 12 14 17 19 20 23 27 31 32 36 39 42 44 45 47 LCS_GDT A 160 A 160 8 11 18 4 8 10 10 10 12 13 17 19 19 22 25 27 31 33 36 38 40 44 46 LCS_GDT Y 161 Y 161 8 11 18 4 8 10 10 10 12 13 17 19 19 22 25 27 28 30 32 35 39 43 45 LCS_GDT P 162 P 162 8 11 18 4 8 10 10 10 12 13 17 19 19 21 25 27 28 30 31 33 37 40 43 LCS_GDT S 163 S 163 4 11 18 3 4 4 5 6 11 13 13 16 16 19 24 25 26 28 31 33 35 35 37 LCS_AVERAGE LCS_A: 7.55 ( 3.67 5.35 13.63 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 10 11 12 13 17 18 22 27 29 32 32 35 36 39 42 44 45 47 GDT PERCENT_AT 4.05 6.08 6.76 7.43 8.11 8.78 11.49 12.16 14.86 18.24 19.59 21.62 21.62 23.65 24.32 26.35 28.38 29.73 30.41 31.76 GDT RMS_LOCAL 0.21 0.47 0.66 1.13 1.32 1.69 2.76 2.88 3.36 3.69 3.87 4.19 4.19 4.96 5.04 5.40 5.75 5.95 6.05 6.28 GDT RMS_ALL_AT 25.15 25.06 25.10 24.48 24.25 23.37 21.21 21.28 21.45 21.69 21.75 21.96 21.96 19.31 19.27 19.18 19.45 19.54 19.57 19.49 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 9 M 9 22.435 4 0.204 0.204 23.604 0.000 0.000 LGA L 10 L 10 22.592 4 0.570 0.570 24.116 0.000 0.000 LGA T 11 T 11 27.662 3 0.611 0.611 27.662 0.000 0.000 LGA Y 12 Y 12 26.520 8 0.649 0.649 26.842 0.000 0.000 LGA L 13 L 13 26.429 4 0.559 0.559 26.674 0.000 0.000 LGA E 14 E 14 27.896 5 0.581 0.581 29.599 0.000 0.000 LGA E 15 E 15 33.101 5 0.562 0.562 33.101 0.000 0.000 LGA Q 16 Q 16 30.703 5 0.050 0.050 31.881 0.000 0.000 LGA L 17 L 17 28.508 4 0.045 0.045 29.679 0.000 0.000 LGA E 18 E 18 27.757 5 0.181 0.181 28.473 0.000 0.000 LGA K 19 K 19 26.792 5 0.073 0.073 27.408 0.000 0.000 LGA H 20 H 20 24.671 6 0.115 0.115 25.494 0.000 0.000 LGA L 21 L 21 22.418 4 0.449 0.449 23.532 0.000 0.000 LGA G 22 G 22 19.577 0 0.048 0.048 20.951 0.000 0.000 LGA D 23 D 23 14.212 4 0.116 0.116 16.510 0.000 0.000 LGA Y 24 Y 24 13.993 8 0.581 0.581 14.644 0.000 0.000 LGA E 25 E 25 12.785 5 0.585 0.585 13.070 0.000 0.000 LGA V 26 V 26 12.312 3 0.600 0.600 13.390 0.000 0.000 LGA G 27 G 27 16.505 0 0.646 0.646 18.858 0.000 0.000 LGA L 28 L 28 22.188 4 0.627 0.627 22.597 0.000 0.000 LGA D 29 D 29 22.016 4 0.486 0.486 22.812 0.000 0.000 LGA W 30 W 30 24.939 10 0.293 0.293 28.466 0.000 0.000 LGA D 31 D 31 29.494 4 0.155 0.155 32.485 0.000 0.000 LGA R 32 R 32 35.842 7 0.077 0.077 38.844 0.000 0.000 LGA K 33 K 33 39.498 5 0.026 0.026 40.120 0.000 0.000 LGA N 34 N 34 35.272 4 0.118 0.118 36.210 0.000 0.000 LGA H 35 H 35 32.821 6 0.116 0.116 33.598 0.000 0.000 LGA T 36 T 36 25.649 3 0.099 0.099 28.211 0.000 0.000 LGA I 37 I 37 19.904 4 0.180 0.180 21.949 0.000 0.000 LGA E 38 E 38 12.879 5 0.083 0.083 15.329 0.000 0.000 LGA V 39 V 39 7.985 3 0.114 0.114 9.296 17.976 10.272 LGA I 40 I 40 2.893 4 0.109 0.109 5.866 36.786 18.393 LGA V 41 V 41 6.463 3 0.060 0.060 7.934 15.714 8.980 LGA R 42 R 42 11.838 7 0.227 0.227 14.406 0.119 0.043 LGA E 46 E 46 25.561 5 0.087 0.087 25.561 0.000 0.000 LGA N 47 N 47 22.824 4 0.469 0.469 23.762 0.000 0.000 LGA N 48 N 48 24.113 4 0.555 0.555 25.259 0.000 0.000 LGA E 49 E 49 22.786 5 0.570 0.570 22.786 0.000 0.000 LGA Q 50 Q 50 21.017 5 0.344 0.344 21.933 0.000 0.000 LGA V 51 V 51 18.678 3 0.100 0.100 19.022 0.000 0.000 LGA A 52 A 52 21.448 1 0.212 0.212 21.882 0.000 0.000 LGA I 53 I 53 20.631 4 0.047 0.047 22.564 0.000 0.000 LGA D 54 D 54 25.520 4 0.071 0.071 25.520 0.000 0.000 LGA D 55 D 55 27.147 4 0.459 0.459 28.533 0.000 0.000 LGA V 56 V 56 28.193 3 0.073 0.073 29.542 0.000 0.000 LGA E 64 E 64 15.338 5 0.664 0.664 15.338 0.000 0.000 LGA F 65 F 65 13.475 7 0.290 0.290 13.859 0.000 0.000 LGA I 66 I 66 13.059 4 0.133 0.133 13.226 0.000 0.000 LGA I 91 I 91 19.098 4 0.162 0.162 19.530 0.000 0.000 LGA P 92 P 92 20.828 3 0.062 0.062 20.935 0.000 0.000 LGA Y 93 Y 93 20.513 8 0.161 0.161 20.568 0.000 0.000 LGA E 94 E 94 21.239 5 0.400 0.400 22.531 0.000 0.000 LGA G 95 G 95 19.216 0 0.187 0.187 19.216 0.000 0.000 LGA K 96 K 96 18.983 5 0.608 0.608 19.954 0.000 0.000 LGA K 97 K 97 19.425 5 0.642 0.642 19.425 0.000 0.000 LGA L 111 L 111 7.732 4 0.596 0.596 9.800 3.810 1.905 LGA K 112 K 112 8.529 5 0.617 0.617 8.529 5.476 2.434 LGA V 113 V 113 7.425 3 0.608 0.608 8.081 8.810 5.034 LGA V 114 V 114 6.906 3 0.605 0.605 6.906 20.714 11.837 LGA L 115 L 115 3.259 4 0.634 0.634 4.298 43.452 21.726 LGA D 116 D 116 4.830 4 0.540 0.540 5.328 34.524 17.262 LGA Q 119 Q 119 3.440 5 0.036 0.036 4.812 45.476 20.212 LGA S 120 S 120 5.738 2 0.135 0.135 5.738 27.738 18.492 LGA D 121 D 121 6.117 4 0.081 0.081 6.117 24.048 12.024 LGA L 122 L 122 3.235 4 0.131 0.131 3.845 53.810 26.905 LGA L 123 L 123 0.947 4 0.050 0.050 1.281 85.952 42.976 LGA D 124 D 124 3.015 4 0.061 0.061 3.296 53.690 26.845 LGA F 125 F 125 4.795 7 0.052 0.052 4.795 35.833 13.030 LGA L 126 L 126 4.313 4 0.156 0.156 4.749 38.810 19.405 LGA S 127 S 127 2.114 2 0.055 0.055 2.511 66.905 44.603 LGA D 128 D 128 2.294 4 0.549 0.549 3.422 57.381 28.690 LGA E 129 E 129 5.470 5 0.531 0.531 5.470 34.524 15.344 LGA T 130 T 130 2.401 3 0.440 0.440 2.766 64.881 37.075 LGA A 131 A 131 3.384 1 0.209 0.209 3.384 61.190 48.952 LGA E 132 E 132 3.145 5 0.040 0.040 3.420 59.405 26.402 LGA V 133 V 133 2.336 3 0.049 0.049 3.607 55.595 31.769 LGA F 134 F 134 3.150 7 0.167 0.167 3.940 48.452 17.619 LGA E 135 E 135 4.603 5 0.186 0.186 4.603 37.262 16.561 LGA L 136 L 136 3.316 4 0.063 0.063 3.671 57.738 28.869 LGA H 137 H 137 1.871 6 0.036 0.036 2.554 71.071 28.429 LGA W 138 W 138 1.219 10 0.259 0.259 1.304 83.690 23.912 LGA E 139 E 139 3.411 5 0.542 0.542 4.959 45.833 20.370 LGA P 140 P 140 6.997 3 0.589 0.589 8.708 10.595 6.054 LGA A 141 A 141 12.656 1 0.166 0.166 12.697 0.000 0.000 LGA D 142 D 142 8.414 4 0.202 0.202 9.437 11.190 5.595 LGA F 143 F 143 5.581 7 0.557 0.557 8.794 12.619 4.589 LGA E 144 E 144 12.046 5 0.599 0.599 12.220 0.119 0.053 LGA A 145 A 145 13.474 1 0.635 0.635 15.579 0.000 0.000 LGA M 146 M 146 15.434 4 0.601 0.601 18.986 0.000 0.000 LGA I 147 I 147 21.879 4 0.621 0.621 25.207 0.000 0.000 LGA K 148 K 148 26.435 5 0.592 0.592 29.329 0.000 0.000 LGA K 149 K 149 29.957 5 0.670 0.670 31.279 0.000 0.000 LGA V 150 V 150 31.895 3 0.179 0.179 35.045 0.000 0.000 LGA A 151 A 151 36.357 1 0.033 0.033 38.891 0.000 0.000 LGA E 152 E 152 37.008 5 0.651 0.651 37.008 0.000 0.000 LGA T 153 T 153 34.997 3 0.225 0.225 36.582 0.000 0.000 LGA E 154 E 154 39.148 5 0.602 0.602 39.148 0.000 0.000 LGA K 155 K 155 39.510 5 0.068 0.068 39.585 0.000 0.000 LGA E 156 E 156 35.133 5 0.104 0.104 37.444 0.000 0.000 LGA Q 157 Q 157 34.766 5 0.040 0.040 34.766 0.000 0.000 LGA W 158 W 158 31.279 10 0.043 0.043 33.041 0.000 0.000 LGA I 159 I 159 29.056 4 0.171 0.171 29.440 0.000 0.000 LGA A 160 A 160 28.473 1 0.052 0.052 28.959 0.000 0.000 LGA Y 161 Y 161 25.227 8 0.068 0.068 28.013 0.000 0.000 LGA P 162 P 162 26.166 3 0.108 0.108 26.166 0.000 0.000 LGA S 163 S 163 26.700 2 0.119 0.119 27.699 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 106 424 424 100.00 883 424 48.02 148 SUMMARY(RMSD_GDC): 17.038 16.975 16.975 8.995 4.477 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 106 148 4.0 18 2.88 13.007 11.309 0.603 LGA_LOCAL RMSD: 2.884 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.284 Number of assigned atoms: 106 Std_ASGN_ATOMS RMSD: 17.038 Standard rmsd on all 106 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.838485 * X + -0.171486 * Y + 0.517238 * Z + 66.062492 Y_new = 0.504350 * X + 0.115188 * Y + 0.855782 * Z + -42.902466 Z_new = -0.206335 * X + 0.978429 * Y + -0.010095 * Z + 53.294857 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.600070 0.207827 1.581113 [DEG: 148.9730 11.9076 90.5911 ] ZXZ: 2.597941 1.580891 -0.207838 [DEG: 148.8511 90.5784 -11.9082 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0578AL396_1-D1 REMARK 2: T0578-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0578AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 106 148 4.0 18 2.88 11.309 17.04 REMARK ---------------------------------------------------------- MOLECULE T0578AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 2pol_A ATOM 33 N MET 9 64.033 74.812 89.646 1.00 0.00 N ATOM 34 CA MET 9 64.064 76.020 90.446 1.00 0.00 C ATOM 35 C MET 9 62.746 76.455 91.056 1.00 0.00 C ATOM 36 O MET 9 62.739 77.367 91.887 1.00 0.00 O ATOM 37 N LEU 10 61.621 75.815 90.678 1.00 0.00 N ATOM 38 CA LEU 10 60.300 76.172 91.182 1.00 0.00 C ATOM 39 C LEU 10 59.704 75.037 91.988 1.00 0.00 C ATOM 40 O LEU 10 59.800 73.871 91.638 1.00 0.00 O ATOM 41 N THR 11 59.081 75.404 93.083 1.00 0.00 N ATOM 42 CA THR 11 58.558 74.505 94.081 1.00 0.00 C ATOM 43 C THR 11 57.136 74.970 94.320 1.00 0.00 C ATOM 44 O THR 11 56.857 76.159 94.331 1.00 0.00 O ATOM 45 N TYR 12 56.240 74.060 94.605 1.00 0.00 N ATOM 46 CA TYR 12 54.868 74.355 94.877 1.00 0.00 C ATOM 47 C TYR 12 54.590 73.415 96.026 1.00 0.00 C ATOM 48 O TYR 12 54.939 72.236 95.955 1.00 0.00 O ATOM 49 N LEU 13 53.981 73.888 97.092 1.00 0.00 N ATOM 50 CA LEU 13 53.650 73.066 98.238 1.00 0.00 C ATOM 51 C LEU 13 52.108 73.085 98.401 1.00 0.00 C ATOM 52 O LEU 13 51.440 74.126 98.211 1.00 0.00 O ATOM 53 N GLU 14 51.473 71.968 98.733 1.00 0.00 N ATOM 54 CA GLU 14 50.050 71.928 98.752 1.00 0.00 C ATOM 55 C GLU 14 49.628 70.704 99.499 1.00 0.00 C ATOM 56 O GLU 14 50.346 69.710 99.592 1.00 0.00 O ATOM 57 N GLU 15 48.459 70.747 100.104 1.00 0.00 N ATOM 58 CA GLU 15 47.970 69.615 100.856 1.00 0.00 C ATOM 59 C GLU 15 47.642 68.492 99.917 1.00 0.00 C ATOM 60 O GLU 15 46.985 68.688 98.899 1.00 0.00 O ATOM 61 N GLN 16 48.063 67.297 100.275 1.00 0.00 N ATOM 62 CA GLN 16 47.899 66.164 99.412 1.00 0.00 C ATOM 63 C GLN 16 46.445 65.896 99.120 1.00 0.00 C ATOM 64 O GLN 16 46.129 65.629 97.960 1.00 0.00 O ATOM 65 N LEU 17 45.530 66.056 100.078 1.00 0.00 N ATOM 66 CA LEU 17 44.155 65.692 99.836 1.00 0.00 C ATOM 67 C LEU 17 43.456 66.686 98.984 1.00 0.00 C ATOM 68 O LEU 17 42.796 66.286 98.042 1.00 0.00 O ATOM 69 N GLU 18 43.587 67.968 99.265 1.00 0.00 N ATOM 70 CA GLU 18 43.010 68.953 98.396 1.00 0.00 C ATOM 71 C GLU 18 43.563 68.708 97.040 1.00 0.00 C ATOM 72 O GLU 18 42.761 68.411 96.185 1.00 0.00 O ATOM 73 N LYS 19 44.864 68.635 96.811 1.00 0.00 N ATOM 74 CA LYS 19 45.397 68.510 95.460 1.00 0.00 C ATOM 75 C LYS 19 44.848 67.288 94.756 1.00 0.00 C ATOM 76 O LYS 19 44.313 67.390 93.657 1.00 0.00 O ATOM 77 N HIS 20 44.762 66.179 95.461 1.00 0.00 N ATOM 78 CA HIS 20 44.203 64.942 94.938 1.00 0.00 C ATOM 79 C HIS 20 42.735 65.017 94.551 1.00 0.00 C ATOM 80 O HIS 20 42.320 64.455 93.547 1.00 0.00 O ATOM 81 N LEU 21 41.900 65.720 95.302 1.00 0.00 N ATOM 82 CA LEU 21 40.460 65.870 95.100 1.00 0.00 C ATOM 83 C LEU 21 40.263 66.705 93.852 1.00 0.00 C ATOM 84 O LEU 21 39.518 66.335 92.969 1.00 0.00 O ATOM 85 N GLY 22 40.957 67.815 93.682 1.00 0.00 N ATOM 86 CA GLY 22 40.876 68.619 92.517 1.00 0.00 C ATOM 87 C GLY 22 41.345 67.908 91.278 1.00 0.00 C ATOM 88 O GLY 22 40.710 68.099 90.252 1.00 0.00 O ATOM 89 N ASP 23 42.445 67.143 91.195 1.00 0.00 N ATOM 90 CA ASP 23 42.823 66.379 90.002 1.00 0.00 C ATOM 91 C ASP 23 41.837 65.232 89.764 1.00 0.00 C ATOM 92 O ASP 23 41.574 64.823 88.618 1.00 0.00 O ATOM 93 N TYR 24 41.302 64.578 90.779 1.00 0.00 N ATOM 94 CA TYR 24 40.319 63.538 90.494 1.00 0.00 C ATOM 95 C TYR 24 39.061 64.186 89.913 1.00 0.00 C ATOM 96 O TYR 24 38.511 63.677 88.936 1.00 0.00 O ATOM 97 N GLU 25 38.581 65.337 90.382 1.00 0.00 N ATOM 98 CA GLU 25 37.453 66.017 89.732 1.00 0.00 C ATOM 99 C GLU 25 37.792 66.527 88.370 1.00 0.00 C ATOM 100 O GLU 25 36.949 66.434 87.492 1.00 0.00 O ATOM 101 N VAL 26 38.981 67.072 88.101 1.00 0.00 N ATOM 102 CA VAL 26 39.316 67.531 86.761 1.00 0.00 C ATOM 103 C VAL 26 39.444 66.347 85.828 1.00 0.00 C ATOM 104 O VAL 26 38.984 66.409 84.689 1.00 0.00 O ATOM 105 N GLY 27 39.945 65.201 86.272 1.00 0.00 N ATOM 106 CA GLY 27 40.086 64.024 85.440 1.00 0.00 C ATOM 107 C GLY 27 38.806 63.530 84.814 1.00 0.00 C ATOM 108 O GLY 27 38.868 62.918 83.749 1.00 0.00 O ATOM 109 N LEU 28 37.636 63.725 85.469 1.00 0.00 N ATOM 110 CA LEU 28 36.338 63.269 84.957 1.00 0.00 C ATOM 111 C LEU 28 36.102 63.802 83.525 1.00 0.00 C ATOM 112 O LEU 28 35.495 63.140 82.674 1.00 0.00 O ATOM 113 N ASP 29 36.588 65.003 83.208 1.00 0.00 N ATOM 114 CA ASP 29 36.325 65.561 81.903 1.00 0.00 C ATOM 115 C ASP 29 37.551 65.598 81.006 1.00 0.00 C ATOM 116 O ASP 29 37.584 66.361 80.051 1.00 0.00 O ATOM 117 N TRP 30 38.556 64.730 81.209 1.00 0.00 N ATOM 118 CA TRP 30 39.690 64.711 80.327 1.00 0.00 C ATOM 119 C TRP 30 39.480 63.608 79.313 1.00 0.00 C ATOM 120 O TRP 30 38.542 62.797 79.357 1.00 0.00 O ATOM 121 N ASP 31 40.345 63.650 78.319 1.00 0.00 N ATOM 122 CA ASP 31 40.344 62.705 77.237 1.00 0.00 C ATOM 123 C ASP 31 40.533 61.315 77.811 1.00 0.00 C ATOM 124 O ASP 31 41.514 61.040 78.476 1.00 0.00 O ATOM 125 N ARG 32 39.632 60.390 77.556 1.00 0.00 N ATOM 126 CA ARG 32 39.698 59.038 78.095 1.00 0.00 C ATOM 127 C ARG 32 40.982 58.316 77.837 1.00 0.00 C ATOM 128 O ARG 32 41.412 57.525 78.642 1.00 0.00 O ATOM 129 N LYS 33 41.527 58.489 76.643 1.00 0.00 N ATOM 130 CA LYS 33 42.728 57.788 76.240 1.00 0.00 C ATOM 131 C LYS 33 43.990 58.401 76.805 1.00 0.00 C ATOM 132 O LYS 33 44.867 57.664 77.258 1.00 0.00 O ATOM 133 N ASN 34 44.091 59.740 76.780 1.00 0.00 N ATOM 134 CA ASN 34 45.352 60.389 77.095 1.00 0.00 C ATOM 135 C ASN 34 45.383 61.115 78.407 1.00 0.00 C ATOM 136 O ASN 34 46.473 61.378 78.909 1.00 0.00 O ATOM 137 N HIS 35 44.229 61.383 78.995 1.00 0.00 N ATOM 138 CA HIS 35 44.167 61.904 80.348 1.00 0.00 C ATOM 139 C HIS 35 44.994 63.161 80.601 1.00 0.00 C ATOM 140 O HIS 35 45.526 63.424 81.678 1.00 0.00 O ATOM 141 N THR 36 45.090 64.021 79.625 1.00 0.00 N ATOM 142 CA THR 36 45.830 65.239 79.800 1.00 0.00 C ATOM 143 C THR 36 45.090 66.279 80.596 1.00 0.00 C ATOM 144 O THR 36 43.988 66.664 80.186 1.00 0.00 O ATOM 145 N ILE 37 45.716 66.792 81.657 1.00 0.00 N ATOM 146 CA ILE 37 45.257 67.925 82.451 1.00 0.00 C ATOM 147 C ILE 37 46.317 69.019 82.225 1.00 0.00 C ATOM 148 O ILE 37 47.440 68.714 81.851 1.00 0.00 O ATOM 149 N GLU 38 45.974 70.311 82.243 1.00 0.00 N ATOM 150 CA GLU 38 46.851 71.451 81.989 1.00 0.00 C ATOM 151 C GLU 38 46.902 72.203 83.302 1.00 0.00 C ATOM 152 O GLU 38 45.896 72.302 83.995 1.00 0.00 O ATOM 153 N VAL 39 48.066 72.695 83.712 1.00 0.00 N ATOM 154 CA VAL 39 48.343 73.303 85.016 1.00 0.00 C ATOM 155 C VAL 39 48.829 74.722 84.789 1.00 0.00 C ATOM 156 O VAL 39 49.680 74.877 83.912 1.00 0.00 O ATOM 157 N ILE 40 48.361 75.778 85.452 1.00 0.00 N ATOM 158 CA ILE 40 48.878 77.145 85.283 1.00 0.00 C ATOM 159 C ILE 40 49.332 77.465 86.681 1.00 0.00 C ATOM 160 O ILE 40 48.488 77.368 87.592 1.00 0.00 O ATOM 161 N VAL 41 50.601 77.775 86.954 1.00 0.00 N ATOM 162 CA VAL 41 50.873 78.096 88.317 1.00 0.00 C ATOM 163 C VAL 41 51.141 79.580 88.453 1.00 0.00 C ATOM 164 O VAL 41 51.702 80.172 87.529 1.00 0.00 O ATOM 165 N ARG 42 50.689 80.272 89.501 1.00 0.00 N ATOM 166 CA ARG 42 50.982 81.689 89.669 1.00 0.00 C ATOM 167 C ARG 42 51.007 81.995 91.155 1.00 0.00 C ATOM 168 O ARG 42 50.758 81.082 91.941 1.00 0.00 O ATOM 169 N GLU 46 51.295 83.222 91.608 1.00 0.00 N ATOM 170 CA GLU 46 51.549 83.509 93.020 1.00 0.00 C ATOM 171 C GLU 46 50.394 83.082 93.890 1.00 0.00 C ATOM 172 O GLU 46 49.328 83.689 93.895 1.00 0.00 O ATOM 173 N ASN 47 50.664 81.975 94.553 1.00 0.00 N ATOM 174 CA ASN 47 49.774 81.292 95.485 1.00 0.00 C ATOM 175 C ASN 47 48.443 80.721 94.995 1.00 0.00 C ATOM 176 O ASN 47 47.516 80.460 95.775 1.00 0.00 O ATOM 177 N ASN 48 48.412 80.378 93.708 1.00 0.00 N ATOM 178 CA ASN 48 47.264 79.835 93.021 1.00 0.00 C ATOM 179 C ASN 48 47.772 78.694 92.179 1.00 0.00 C ATOM 180 O ASN 48 48.875 78.771 91.608 1.00 0.00 O ATOM 181 N GLU 49 46.990 77.625 92.151 1.00 0.00 N ATOM 182 CA GLU 49 47.106 76.644 91.077 1.00 0.00 C ATOM 183 C GLU 49 45.725 76.448 90.399 1.00 0.00 C ATOM 184 O GLU 49 44.706 76.182 91.015 1.00 0.00 O ATOM 185 N GLN 50 45.697 76.562 89.111 1.00 0.00 N ATOM 186 CA GLN 50 44.572 76.308 88.306 1.00 0.00 C ATOM 187 C GLN 50 44.758 75.016 87.489 1.00 0.00 C ATOM 188 O GLN 50 45.620 74.945 86.606 1.00 0.00 O ATOM 189 N VAL 51 43.972 73.966 87.649 1.00 0.00 N ATOM 190 CA VAL 51 44.094 72.734 86.879 1.00 0.00 C ATOM 191 C VAL 51 42.982 72.847 85.832 1.00 0.00 C ATOM 192 O VAL 51 41.914 73.331 86.178 1.00 0.00 O ATOM 193 N ALA 52 43.042 72.490 84.551 1.00 0.00 N ATOM 194 CA ALA 52 41.862 72.551 83.715 1.00 0.00 C ATOM 195 C ALA 52 41.887 71.331 82.827 1.00 0.00 C ATOM 196 O ALA 52 42.970 70.850 82.534 1.00 0.00 O ATOM 197 N ILE 53 40.779 70.757 82.378 1.00 0.00 N ATOM 198 CA ILE 53 40.798 69.584 81.528 1.00 0.00 C ATOM 199 C ILE 53 39.743 69.778 80.458 1.00 0.00 C ATOM 200 O ILE 53 38.767 70.471 80.710 1.00 0.00 O ATOM 201 N ASP 54 39.940 69.252 79.254 1.00 0.00 N ATOM 202 CA ASP 54 39.016 69.316 78.122 1.00 0.00 C ATOM 203 C ASP 54 38.950 67.914 77.570 1.00 0.00 C ATOM 204 O ASP 54 39.908 67.122 77.641 1.00 0.00 O ATOM 205 N ASP 55 37.873 67.565 76.936 1.00 0.00 N ATOM 206 CA ASP 55 37.812 66.258 76.337 1.00 0.00 C ATOM 207 C ASP 55 37.275 66.429 74.922 1.00 0.00 C ATOM 208 O ASP 55 36.823 67.535 74.539 1.00 0.00 O ATOM 209 N VAL 56 37.328 65.398 74.056 1.00 0.00 N ATOM 210 CA VAL 56 36.887 65.477 72.681 1.00 0.00 C ATOM 211 C VAL 56 35.504 66.097 72.462 1.00 0.00 C ATOM 212 O VAL 56 35.287 66.758 71.451 1.00 0.00 O ATOM 241 N GLU 64 40.510 75.834 90.830 1.00 0.00 N ATOM 242 CA GLU 64 41.414 76.890 91.234 1.00 0.00 C ATOM 243 C GLU 64 41.821 76.554 92.687 1.00 0.00 C ATOM 244 O GLU 64 40.907 76.162 93.424 1.00 0.00 O ATOM 245 N PHE 65 43.075 76.586 93.211 1.00 0.00 N ATOM 246 CA PHE 65 43.265 76.330 94.633 1.00 0.00 C ATOM 247 C PHE 65 44.390 77.147 95.219 1.00 0.00 C ATOM 248 O PHE 65 45.224 77.741 94.515 1.00 0.00 O ATOM 249 N ILE 66 44.363 77.246 96.532 1.00 0.00 N ATOM 250 CA ILE 66 45.428 77.944 97.207 1.00 0.00 C ATOM 251 C ILE 66 46.492 76.949 97.586 1.00 0.00 C ATOM 252 O ILE 66 46.269 75.989 98.344 1.00 0.00 O ATOM 253 N ILE 91 47.629 77.403 97.064 1.00 0.00 N ATOM 254 CA ILE 91 48.878 76.668 96.952 1.00 0.00 C ATOM 255 C ILE 91 50.021 77.541 97.483 1.00 0.00 C ATOM 256 O ILE 91 49.895 78.752 97.297 1.00 0.00 O ATOM 257 N PRO 92 51.111 77.101 98.160 1.00 0.00 N ATOM 258 CA PRO 92 52.250 77.986 98.474 1.00 0.00 C ATOM 259 C PRO 92 53.080 77.961 97.205 1.00 0.00 C ATOM 260 O PRO 92 53.390 76.898 96.667 1.00 0.00 O ATOM 261 N TYR 93 53.353 79.088 96.611 1.00 0.00 N ATOM 262 CA TYR 93 54.148 79.098 95.406 1.00 0.00 C ATOM 263 C TYR 93 54.450 80.567 95.212 1.00 0.00 C ATOM 264 O TYR 93 53.545 81.403 95.135 1.00 0.00 O ATOM 265 N GLU 94 55.725 80.855 95.114 1.00 0.00 N ATOM 266 CA GLU 94 56.191 82.202 94.886 1.00 0.00 C ATOM 267 C GLU 94 57.188 81.893 93.784 1.00 0.00 C ATOM 268 O GLU 94 58.008 80.971 93.883 1.00 0.00 O ATOM 269 N GLY 95 57.078 82.555 92.666 1.00 0.00 N ATOM 270 CA GLY 95 57.934 82.212 91.572 1.00 0.00 C ATOM 271 C GLY 95 57.241 82.646 90.323 1.00 0.00 C ATOM 272 O GLY 95 56.154 83.211 90.384 1.00 0.00 O ATOM 273 N LYS 96 57.839 82.342 89.208 1.00 0.00 N ATOM 274 CA LYS 96 57.310 82.785 87.954 1.00 0.00 C ATOM 275 C LYS 96 56.264 81.850 87.374 1.00 0.00 C ATOM 276 O LYS 96 56.354 80.639 87.439 1.00 0.00 O ATOM 277 N LYS 97 55.338 82.457 86.670 1.00 0.00 N ATOM 278 CA LYS 97 54.171 81.827 86.119 1.00 0.00 C ATOM 279 C LYS 97 54.519 80.934 84.985 1.00 0.00 C ATOM 280 O LYS 97 55.311 81.328 84.142 1.00 0.00 O ATOM 281 N LEU 111 53.901 79.767 84.941 1.00 0.00 N ATOM 282 CA LEU 111 54.134 78.812 83.879 1.00 0.00 C ATOM 283 C LEU 111 52.955 77.899 83.608 1.00 0.00 C ATOM 284 O LEU 111 52.040 77.837 84.418 1.00 0.00 O ATOM 285 N LYS 112 52.900 77.155 82.531 1.00 0.00 N ATOM 286 CA LYS 112 51.844 76.184 82.268 1.00 0.00 C ATOM 287 C LYS 112 52.579 74.887 82.052 1.00 0.00 C ATOM 288 O LYS 112 53.699 74.905 81.540 1.00 0.00 O ATOM 289 N VAL 113 52.016 73.765 82.413 1.00 0.00 N ATOM 290 CA VAL 113 52.571 72.508 82.028 1.00 0.00 C ATOM 291 C VAL 113 51.382 71.558 81.872 1.00 0.00 C ATOM 292 O VAL 113 50.419 71.686 82.613 1.00 0.00 O ATOM 293 N VAL 114 51.268 70.676 80.907 1.00 0.00 N ATOM 294 CA VAL 114 50.241 69.674 80.985 1.00 0.00 C ATOM 295 C VAL 114 50.833 68.284 81.326 1.00 0.00 C ATOM 296 O VAL 114 52.012 67.986 81.073 1.00 0.00 O ATOM 297 N LEU 115 50.075 67.399 81.978 1.00 0.00 N ATOM 298 CA LEU 115 50.517 66.066 82.088 1.00 0.00 C ATOM 299 C LEU 115 49.378 65.124 82.228 1.00 0.00 C ATOM 300 O LEU 115 48.258 65.546 82.422 1.00 0.00 O ATOM 301 N ASP 116 49.645 63.849 82.112 1.00 0.00 N ATOM 302 CA ASP 116 48.678 62.817 82.306 1.00 0.00 C ATOM 303 C ASP 116 48.354 62.710 83.784 1.00 0.00 C ATOM 304 O ASP 116 49.175 62.288 84.608 1.00 0.00 O ATOM 305 N GLN 119 47.111 63.082 84.101 1.00 0.00 N ATOM 306 CA GLN 119 46.534 63.074 85.439 1.00 0.00 C ATOM 307 C GLN 119 46.475 61.679 86.024 1.00 0.00 C ATOM 308 O GLN 119 46.656 61.599 87.231 1.00 0.00 O ATOM 309 N SER 120 46.276 60.533 85.366 1.00 0.00 N ATOM 310 CA SER 120 46.405 59.241 86.062 1.00 0.00 C ATOM 311 C SER 120 47.772 59.024 86.711 1.00 0.00 C ATOM 312 O SER 120 47.825 58.523 87.833 1.00 0.00 O ATOM 313 N ASP 121 48.877 59.430 86.072 1.00 0.00 N ATOM 314 CA ASP 121 50.190 59.225 86.637 1.00 0.00 C ATOM 315 C ASP 121 50.355 60.066 87.878 1.00 0.00 C ATOM 316 O ASP 121 50.850 59.559 88.878 1.00 0.00 O ATOM 317 N LEU 122 49.883 61.300 87.898 1.00 0.00 N ATOM 318 CA LEU 122 50.007 62.108 89.109 1.00 0.00 C ATOM 319 C LEU 122 49.032 61.696 90.168 1.00 0.00 C ATOM 320 O LEU 122 49.339 61.882 91.342 1.00 0.00 O ATOM 321 N LEU 123 47.900 61.073 89.864 1.00 0.00 N ATOM 322 CA LEU 123 46.995 60.658 90.914 1.00 0.00 C ATOM 323 C LEU 123 47.632 59.443 91.579 1.00 0.00 C ATOM 324 O LEU 123 47.601 59.298 92.806 1.00 0.00 O ATOM 325 N ASP 124 48.275 58.575 90.806 1.00 0.00 N ATOM 326 CA ASP 124 48.937 57.401 91.320 1.00 0.00 C ATOM 327 C ASP 124 49.961 57.712 92.346 1.00 0.00 C ATOM 328 O ASP 124 50.025 57.020 93.365 1.00 0.00 O ATOM 329 N PHE 125 50.764 58.750 92.064 1.00 0.00 N ATOM 330 CA PHE 125 51.778 59.137 93.024 1.00 0.00 C ATOM 331 C PHE 125 51.085 59.811 94.214 1.00 0.00 C ATOM 332 O PHE 125 51.456 59.372 95.302 1.00 0.00 O ATOM 333 N LEU 126 50.071 60.722 94.120 1.00 0.00 N ATOM 334 CA LEU 126 49.402 61.285 95.278 1.00 0.00 C ATOM 335 C LEU 126 48.715 60.217 96.103 1.00 0.00 C ATOM 336 O LEU 126 48.551 60.359 97.307 1.00 0.00 O ATOM 337 N SER 127 48.278 59.100 95.537 1.00 0.00 N ATOM 338 CA SER 127 47.740 57.980 96.315 1.00 0.00 C ATOM 339 C SER 127 48.853 57.163 96.973 1.00 0.00 C ATOM 340 O SER 127 48.596 56.503 97.967 1.00 0.00 O ATOM 341 N ASP 128 50.082 57.091 96.449 1.00 0.00 N ATOM 342 CA ASP 128 51.206 56.427 97.101 1.00 0.00 C ATOM 343 C ASP 128 51.843 57.283 98.190 1.00 0.00 C ATOM 344 O ASP 128 52.547 56.802 99.087 1.00 0.00 O ATOM 345 N GLU 129 51.672 58.594 98.043 1.00 0.00 N ATOM 346 CA GLU 129 52.167 59.569 98.976 1.00 0.00 C ATOM 347 C GLU 129 51.100 59.618 100.065 1.00 0.00 C ATOM 348 O GLU 129 50.116 60.360 100.002 1.00 0.00 O ATOM 349 N THR 130 51.204 58.830 101.104 1.00 0.00 N ATOM 350 CA THR 130 50.200 58.871 102.149 1.00 0.00 C ATOM 351 C THR 130 50.676 59.902 103.191 1.00 0.00 C ATOM 352 O THR 130 50.984 59.611 104.355 1.00 0.00 O ATOM 353 N ALA 131 50.748 61.180 102.788 1.00 0.00 N ATOM 354 CA ALA 131 51.302 62.219 103.644 1.00 0.00 C ATOM 355 C ALA 131 50.552 63.529 103.635 1.00 0.00 C ATOM 356 O ALA 131 49.737 63.688 102.754 1.00 0.00 O ATOM 357 N GLU 132 50.780 64.499 104.536 1.00 0.00 N ATOM 358 CA GLU 132 49.970 65.694 104.617 1.00 0.00 C ATOM 359 C GLU 132 50.190 66.677 103.501 1.00 0.00 C ATOM 360 O GLU 132 49.203 67.197 102.968 1.00 0.00 O ATOM 361 N VAL 133 51.444 66.940 103.124 1.00 0.00 N ATOM 362 CA VAL 133 51.784 67.923 102.108 1.00 0.00 C ATOM 363 C VAL 133 52.723 67.337 101.131 1.00 0.00 C ATOM 364 O VAL 133 53.554 66.496 101.488 1.00 0.00 O ATOM 365 N PHE 134 52.560 67.855 99.929 1.00 0.00 N ATOM 366 CA PHE 134 53.205 67.410 98.721 1.00 0.00 C ATOM 367 C PHE 134 54.009 68.583 98.272 1.00 0.00 C ATOM 368 O PHE 134 53.573 69.704 98.557 1.00 0.00 O ATOM 369 N GLU 135 55.130 68.318 97.600 1.00 0.00 N ATOM 370 CA GLU 135 55.975 69.353 97.048 1.00 0.00 C ATOM 371 C GLU 135 56.089 68.952 95.594 1.00 0.00 C ATOM 372 O GLU 135 56.355 67.785 95.293 1.00 0.00 O ATOM 373 N LEU 136 55.776 69.838 94.678 1.00 0.00 N ATOM 374 CA LEU 136 55.921 69.530 93.278 1.00 0.00 C ATOM 375 C LEU 136 57.028 70.431 92.824 1.00 0.00 C ATOM 376 O LEU 136 56.969 71.633 93.120 1.00 0.00 O ATOM 377 N HIS 137 58.076 69.932 92.179 1.00 0.00 N ATOM 378 CA HIS 137 59.255 70.736 91.740 1.00 0.00 C ATOM 379 C HIS 137 59.310 70.886 90.198 1.00 0.00 C ATOM 380 O HIS 137 59.452 69.932 89.443 1.00 0.00 O ATOM 381 N TRP 138 59.146 72.062 89.662 1.00 0.00 N ATOM 382 CA TRP 138 58.989 72.241 88.257 1.00 0.00 C ATOM 383 C TRP 138 60.182 73.050 87.759 1.00 0.00 C ATOM 384 O TRP 138 60.927 73.675 88.502 1.00 0.00 O ATOM 385 N GLU 139 60.347 73.066 86.461 1.00 0.00 N ATOM 386 CA GLU 139 61.407 73.762 85.824 1.00 0.00 C ATOM 387 C GLU 139 60.725 74.609 84.748 1.00 0.00 C ATOM 388 O GLU 139 60.762 75.838 84.772 1.00 0.00 O ATOM 389 N PRO 140 60.048 73.977 83.790 1.00 0.00 N ATOM 390 CA PRO 140 59.419 74.664 82.680 1.00 0.00 C ATOM 391 C PRO 140 58.463 73.706 82.038 1.00 0.00 C ATOM 392 O PRO 140 58.467 72.516 82.338 1.00 0.00 O ATOM 393 N ALA 141 57.713 74.225 81.077 1.00 0.00 N ATOM 394 CA ALA 141 56.691 73.506 80.380 1.00 0.00 C ATOM 395 C ALA 141 57.211 72.361 79.615 1.00 0.00 C ATOM 396 O ALA 141 56.400 71.670 78.995 1.00 0.00 O ATOM 397 N ASP 142 58.513 72.133 79.560 1.00 0.00 N ATOM 398 CA ASP 142 58.993 71.071 78.673 1.00 0.00 C ATOM 399 C ASP 142 59.947 70.087 79.345 1.00 0.00 C ATOM 400 O ASP 142 60.577 69.238 78.710 1.00 0.00 O ATOM 401 N PHE 143 59.949 70.133 80.678 1.00 0.00 N ATOM 402 CA PHE 143 60.756 69.284 81.529 1.00 0.00 C ATOM 403 C PHE 143 59.837 68.427 82.384 1.00 0.00 C ATOM 404 O PHE 143 58.704 68.839 82.653 1.00 0.00 O ATOM 405 N GLU 144 60.301 67.259 82.856 1.00 0.00 N ATOM 406 CA GLU 144 59.571 66.459 83.809 1.00 0.00 C ATOM 407 C GLU 144 59.383 67.211 85.102 1.00 0.00 C ATOM 408 O GLU 144 59.994 68.258 85.312 1.00 0.00 O ATOM 409 N ALA 145 58.533 66.722 85.991 1.00 0.00 N ATOM 410 CA ALA 145 58.357 67.330 87.293 1.00 0.00 C ATOM 411 C ALA 145 58.591 66.170 88.253 1.00 0.00 C ATOM 412 O ALA 145 58.431 64.980 87.972 1.00 0.00 O ATOM 413 N MET 146 59.085 66.571 89.396 1.00 0.00 N ATOM 414 CA MET 146 59.395 65.700 90.485 1.00 0.00 C ATOM 415 C MET 146 58.353 65.987 91.540 1.00 0.00 C ATOM 416 O MET 146 58.017 67.149 91.785 1.00 0.00 O ATOM 417 N ILE 147 57.883 64.970 92.240 1.00 0.00 N ATOM 418 CA ILE 147 56.928 65.187 93.277 1.00 0.00 C ATOM 419 C ILE 147 57.493 64.389 94.437 1.00 0.00 C ATOM 420 O ILE 147 57.950 63.243 94.299 1.00 0.00 O ATOM 421 N LYS 148 57.385 64.942 95.616 1.00 0.00 N ATOM 422 CA LYS 148 57.748 64.228 96.832 1.00 0.00 C ATOM 423 C LYS 148 56.815 64.678 97.950 1.00 0.00 C ATOM 424 O LYS 148 55.966 65.560 97.777 1.00 0.00 O ATOM 425 N LYS 149 56.972 64.079 99.110 1.00 0.00 N ATOM 426 CA LYS 149 56.322 64.563 100.315 1.00 0.00 C ATOM 427 C LYS 149 57.122 65.795 100.665 1.00 0.00 C ATOM 428 O LYS 149 58.336 65.783 100.577 1.00 0.00 O ATOM 429 N VAL 150 56.512 66.862 101.147 1.00 0.00 N ATOM 430 CA VAL 150 57.213 68.095 101.448 1.00 0.00 C ATOM 431 C VAL 150 58.162 67.996 102.660 1.00 0.00 C ATOM 432 O VAL 150 58.919 68.914 102.968 1.00 0.00 O ATOM 433 N ALA 151 58.098 66.882 103.388 1.00 0.00 N ATOM 434 CA ALA 151 58.867 66.602 104.575 1.00 0.00 C ATOM 435 C ALA 151 59.861 65.435 104.451 1.00 0.00 C ATOM 436 O ALA 151 60.679 65.272 105.365 1.00 0.00 O ATOM 437 N GLU 152 59.864 64.578 103.415 1.00 0.00 N ATOM 438 CA GLU 152 60.814 63.483 103.297 1.00 0.00 C ATOM 439 C GLU 152 61.147 63.539 101.834 1.00 0.00 C ATOM 440 O GLU 152 60.252 63.441 100.977 1.00 0.00 O ATOM 441 N THR 153 62.445 63.675 101.592 1.00 0.00 N ATOM 442 CA THR 153 62.990 63.502 100.275 1.00 0.00 C ATOM 443 C THR 153 63.222 61.993 100.094 1.00 0.00 C ATOM 444 O THR 153 63.779 61.657 99.065 1.00 0.00 O ATOM 445 N GLU 154 62.886 61.031 100.977 1.00 0.00 N ATOM 446 CA GLU 154 63.169 59.629 100.768 1.00 0.00 C ATOM 447 C GLU 154 62.624 59.080 99.495 1.00 0.00 C ATOM 448 O GLU 154 63.281 58.208 98.923 1.00 0.00 O ATOM 449 N LYS 155 61.421 59.476 99.085 1.00 0.00 N ATOM 450 CA LYS 155 60.878 59.017 97.807 1.00 0.00 C ATOM 451 C LYS 155 60.726 60.239 96.903 1.00 0.00 C ATOM 452 O LYS 155 60.488 61.344 97.411 1.00 0.00 O ATOM 453 N GLU 156 60.847 60.001 95.612 1.00 0.00 N ATOM 454 CA GLU 156 60.858 61.009 94.567 1.00 0.00 C ATOM 455 C GLU 156 60.204 60.281 93.418 1.00 0.00 C ATOM 456 O GLU 156 60.395 59.059 93.251 1.00 0.00 O ATOM 457 N GLN 157 59.360 61.013 92.705 1.00 0.00 N ATOM 458 CA GLN 157 58.499 60.477 91.626 1.00 0.00 C ATOM 459 C GLN 157 58.615 61.484 90.535 1.00 0.00 C ATOM 460 O GLN 157 58.656 62.694 90.818 1.00 0.00 O ATOM 461 N TRP 158 58.778 61.003 89.326 1.00 0.00 N ATOM 462 CA TRP 158 58.881 61.927 88.223 1.00 0.00 C ATOM 463 C TRP 158 57.979 61.505 87.077 1.00 0.00 C ATOM 464 O TRP 158 57.810 60.341 86.748 1.00 0.00 O ATOM 465 N ILE 159 57.174 62.494 86.668 1.00 0.00 N ATOM 466 CA ILE 159 56.173 62.339 85.600 1.00 0.00 C ATOM 467 C ILE 159 56.630 63.243 84.458 1.00 0.00 C ATOM 468 O ILE 159 57.170 64.316 84.734 1.00 0.00 O ATOM 469 N ALA 160 56.492 62.842 83.190 1.00 0.00 N ATOM 470 CA ALA 160 56.939 63.640 82.060 1.00 0.00 C ATOM 471 C ALA 160 55.885 64.659 81.667 1.00 0.00 C ATOM 472 O ALA 160 54.716 64.487 82.019 1.00 0.00 O ATOM 473 N TYR 161 56.208 65.714 80.938 1.00 0.00 N ATOM 474 CA TYR 161 55.256 66.694 80.431 1.00 0.00 C ATOM 475 C TYR 161 54.612 66.233 79.131 1.00 0.00 C ATOM 476 O TYR 161 55.197 65.412 78.403 1.00 0.00 O ATOM 477 N PRO 162 53.386 66.712 78.892 1.00 0.00 N ATOM 478 CA PRO 162 52.581 66.437 77.706 1.00 0.00 C ATOM 479 C PRO 162 52.288 67.801 77.168 1.00 0.00 C ATOM 480 O PRO 162 52.218 68.772 77.933 1.00 0.00 O ATOM 481 N SER 163 52.141 67.901 75.855 1.00 0.00 N ATOM 482 CA SER 163 51.857 69.169 75.174 1.00 0.00 C ATOM 483 C SER 163 50.452 68.885 74.692 1.00 0.00 C ATOM 484 O SER 163 50.262 67.963 73.897 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 424 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 76.23 50.3 169 58.1 291 ARMSMC SECONDARY STRUCTURE . . 76.52 52.6 95 59.4 160 ARMSMC SURFACE . . . . . . . . 77.69 49.2 120 66.7 180 ARMSMC BURIED . . . . . . . . 72.52 53.1 49 44.1 111 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 122 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 109 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 67 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 79 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 43 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 90 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 71 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 49 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 63 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 29 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 25 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 14 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 3 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 17.04 (Number of atoms: 106) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 17.04 106 71.6 148 CRMSCA CRN = ALL/NP . . . . . 0.1607 CRMSCA SECONDARY STRUCTURE . . 15.93 55 68.8 80 CRMSCA SURFACE . . . . . . . . 17.62 75 81.5 92 CRMSCA BURIED . . . . . . . . 15.54 31 55.4 56 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 16.98 424 57.8 733 CRMSMC SECONDARY STRUCTURE . . 15.87 220 55.6 396 CRMSMC SURFACE . . . . . . . . 17.46 300 65.5 458 CRMSMC BURIED . . . . . . . . 15.73 124 45.1 275 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 635 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 541 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 339 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 400 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 235 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 16.98 424 34.6 1227 CRMSALL SECONDARY STRUCTURE . . 15.87 220 33.4 659 CRMSALL SURFACE . . . . . . . . 17.46 300 39.1 768 CRMSALL BURIED . . . . . . . . 15.73 124 27.0 459 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 16.162 1.000 0.500 106 71.6 148 ERRCA SECONDARY STRUCTURE . . 15.129 1.000 0.500 55 68.8 80 ERRCA SURFACE . . . . . . . . 16.758 1.000 0.500 75 81.5 92 ERRCA BURIED . . . . . . . . 14.720 1.000 0.500 31 55.4 56 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 16.120 1.000 0.500 424 57.8 733 ERRMC SECONDARY STRUCTURE . . 15.118 1.000 0.500 220 55.6 396 ERRMC SURFACE . . . . . . . . 16.635 1.000 0.500 300 65.5 458 ERRMC BURIED . . . . . . . . 14.877 1.000 0.500 124 45.1 275 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 635 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 541 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 339 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 400 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 235 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 16.120 1.000 0.500 424 34.6 1227 ERRALL SECONDARY STRUCTURE . . 15.118 1.000 0.500 220 33.4 659 ERRALL SURFACE . . . . . . . . 16.635 1.000 0.500 300 39.1 768 ERRALL BURIED . . . . . . . . 14.877 1.000 0.500 124 27.0 459 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 2 15 106 148 DISTCA CA (P) 0.00 0.00 0.00 1.35 10.14 148 DISTCA CA (RMS) 0.00 0.00 0.00 4.76 7.95 DISTCA ALL (N) 0 0 0 3 56 424 1227 DISTALL ALL (P) 0.00 0.00 0.00 0.24 4.56 1227 DISTALL ALL (RMS) 0.00 0.00 0.00 4.73 7.89 DISTALL END of the results output