####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 118 ( 472), selected 98 , name T0574TS328_1-D1 # Molecule2: number of CA atoms 102 ( 749), selected 98 , name T0574-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0574TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 53 - 75 4.84 15.71 LCS_AVERAGE: 17.18 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 66 - 75 1.90 17.85 LONGEST_CONTINUOUS_SEGMENT: 10 67 - 76 1.95 18.91 LCS_AVERAGE: 6.52 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 25 - 31 0.91 23.65 LONGEST_CONTINUOUS_SEGMENT: 7 47 - 53 0.98 19.66 LONGEST_CONTINUOUS_SEGMENT: 7 69 - 75 0.83 18.62 LCS_AVERAGE: 4.62 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 98 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT D 25 D 25 7 8 11 4 5 6 7 8 9 11 16 18 20 25 31 35 37 39 42 49 51 54 55 LCS_GDT A 26 A 26 7 8 11 4 5 6 7 8 9 12 16 18 22 27 31 35 37 42 44 49 51 54 55 LCS_GDT V 27 V 27 7 8 11 4 5 6 7 8 9 12 13 18 22 25 31 35 37 40 43 49 51 54 55 LCS_GDT M 28 M 28 7 8 11 4 5 6 7 8 9 12 16 19 22 25 31 35 37 42 44 49 51 54 55 LCS_GDT V 29 V 29 7 8 11 3 5 6 10 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT F 30 F 30 7 8 11 3 5 6 10 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT A 31 A 31 7 8 11 3 5 6 7 10 11 14 17 21 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT R 32 R 32 3 8 11 3 4 4 6 8 10 14 17 20 25 27 31 35 37 42 44 49 50 54 55 LCS_GDT Q 33 Q 33 3 6 11 3 3 4 6 6 10 14 17 20 25 26 31 35 37 42 44 49 50 51 55 LCS_GDT G 34 G 34 3 4 11 3 3 4 4 6 8 11 15 17 22 26 27 31 37 38 40 44 46 48 54 LCS_GDT D 35 D 35 3 4 11 0 3 4 5 7 9 11 15 16 18 22 24 26 29 32 33 37 40 42 47 LCS_GDT K 36 K 36 3 4 11 1 3 4 5 7 9 11 15 16 18 22 24 26 29 32 33 37 40 41 43 LCS_GDT G 37 G 37 3 3 11 0 3 3 4 7 9 11 15 16 18 22 24 26 29 32 33 37 39 41 43 LCS_GDT S 38 S 38 3 3 11 0 3 3 3 5 5 6 9 11 14 16 21 24 28 29 32 36 39 41 42 LCS_GDT V 39 V 39 3 3 11 0 4 4 4 5 7 7 8 12 13 16 20 24 28 29 31 34 39 41 42 LCS_GDT S 40 S 40 3 4 11 3 4 4 4 5 7 7 8 12 13 16 21 24 28 28 31 34 39 41 42 LCS_GDT V 41 V 41 5 5 11 3 4 5 5 5 5 6 8 8 13 13 18 20 25 27 28 31 33 35 39 LCS_GDT G 42 G 42 5 5 11 3 4 5 5 5 5 5 6 6 10 10 12 14 14 15 21 21 22 24 25 LCS_GDT D 43 D 43 5 5 14 3 4 5 5 5 5 5 7 7 8 9 11 14 17 20 24 25 32 34 35 LCS_GDT K 44 K 44 5 5 14 3 4 5 5 5 7 7 8 12 13 16 21 24 28 29 32 36 39 41 42 LCS_GDT H 45 H 45 5 5 14 1 3 5 5 7 9 11 15 15 18 21 23 26 29 30 33 36 39 41 42 LCS_GDT F 46 F 46 3 9 14 0 3 4 4 8 9 11 12 16 18 20 23 26 29 30 33 36 39 41 42 LCS_GDT R 47 R 47 7 9 14 3 4 7 7 8 10 12 13 16 17 19 22 25 29 30 33 36 39 41 42 LCS_GDT T 48 T 48 7 9 14 3 6 7 7 8 10 12 13 16 17 19 22 22 29 30 33 36 39 41 42 LCS_GDT Q 49 Q 49 7 9 14 3 6 7 7 8 10 12 13 16 17 19 22 24 28 30 33 36 39 41 42 LCS_GDT A 50 A 50 7 9 14 3 6 7 7 8 10 12 13 16 17 19 22 25 29 30 33 36 39 41 42 LCS_GDT F 51 F 51 7 9 14 3 6 7 7 8 10 12 13 16 17 19 22 25 29 30 33 36 39 41 42 LCS_GDT K 52 K 52 7 9 14 3 6 7 7 8 10 12 13 16 17 21 24 27 34 37 40 44 46 48 51 LCS_GDT V 53 V 53 7 9 23 3 6 7 7 8 9 12 16 18 24 27 31 35 37 42 44 49 51 54 55 LCS_GDT R 54 R 54 5 9 23 3 5 5 7 8 11 12 17 20 24 27 31 35 37 42 44 49 51 54 55 LCS_GDT L 55 L 55 5 9 23 3 5 5 6 7 9 11 13 14 18 21 26 35 37 42 44 49 51 54 55 LCS_GDT V 56 V 56 4 9 23 3 4 4 5 6 11 14 19 22 25 27 30 35 37 42 44 49 51 54 55 LCS_GDT N 57 N 57 4 5 23 3 4 4 4 5 11 15 19 22 25 27 30 35 37 39 44 46 51 54 55 LCS_GDT A 58 A 58 4 5 23 4 4 4 4 7 11 15 19 22 25 27 30 35 37 42 44 49 51 54 55 LCS_GDT A 59 A 59 4 5 23 4 4 4 5 7 11 15 19 22 25 27 30 35 37 42 44 49 51 54 55 LCS_GDT K 60 K 60 4 5 23 4 4 4 5 6 7 7 12 14 22 25 29 35 37 42 44 49 51 54 55 LCS_GDT S 61 S 61 4 5 23 4 4 5 10 11 12 15 19 22 25 27 30 35 37 42 44 49 51 54 55 LCS_GDT E 62 E 62 4 6 23 4 4 4 5 6 10 12 17 19 20 24 27 31 35 42 44 49 51 54 55 LCS_GDT I 63 I 63 4 6 23 4 4 5 10 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT S 64 S 64 4 6 23 4 4 5 10 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT L 65 L 65 4 6 23 4 4 6 8 8 10 14 17 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT K 66 K 66 4 10 23 3 3 6 10 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT N 67 N 67 5 10 23 3 4 6 8 10 12 15 19 22 25 27 30 35 37 42 44 49 51 54 55 LCS_GDT S 68 S 68 5 10 23 3 4 6 9 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT C 69 C 69 7 10 23 3 6 7 10 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT L 70 L 70 7 10 23 3 6 7 10 11 12 15 19 22 25 27 30 35 37 42 44 49 51 54 55 LCS_GDT V 71 V 71 7 10 23 3 6 7 8 10 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT A 72 A 72 7 10 23 4 6 7 8 10 11 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT Q 73 Q 73 7 10 23 4 6 7 8 9 10 15 19 21 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT S 74 S 74 7 10 23 4 6 7 8 9 10 15 19 21 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT A 75 A 75 7 10 23 4 6 7 8 9 10 10 14 20 22 25 27 32 34 39 43 49 51 54 55 LCS_GDT A 76 A 76 3 10 22 3 3 4 5 9 10 10 11 14 16 20 25 28 31 36 39 45 51 51 54 LCS_GDT G 77 G 77 4 4 21 3 3 4 4 7 9 11 12 14 15 16 19 24 29 32 35 39 45 51 53 LCS_GDT Q 78 Q 78 4 4 18 3 3 4 5 7 9 11 12 14 15 17 22 27 29 36 36 38 44 51 52 LCS_GDT S 79 S 79 4 4 18 3 3 4 6 7 10 11 13 14 18 21 25 29 34 37 40 46 51 51 54 LCS_GDT F 80 F 80 4 4 18 0 3 4 5 7 9 11 12 13 18 21 25 29 34 37 40 46 51 51 54 LCS_GDT R 81 R 81 3 4 18 3 3 3 4 4 5 7 8 13 16 21 25 29 34 37 40 45 51 51 54 LCS_GDT L 82 L 82 4 4 18 3 5 5 5 5 10 12 16 18 23 27 31 35 37 42 44 49 51 54 55 LCS_GDT D 83 D 83 4 4 18 3 3 5 5 7 10 12 15 18 22 27 31 35 37 42 44 49 51 54 55 LCS_GDT T 84 T 84 4 4 17 3 3 5 5 7 10 12 13 18 22 27 31 35 37 41 44 49 51 54 55 LCS_GDT V 85 V 85 4 7 17 3 3 6 8 8 10 12 13 18 22 27 31 35 37 42 44 49 51 54 55 LCS_GDT D 86 D 86 4 7 14 3 3 4 6 8 10 12 15 18 22 26 30 33 34 38 43 46 50 54 55 LCS_GDT E 87 E 87 5 7 14 4 4 6 8 8 10 14 17 21 25 27 30 35 37 42 44 49 51 54 55 LCS_GDT E 88 E 88 5 7 14 4 4 6 10 11 12 15 19 22 25 27 30 35 37 42 44 49 51 54 55 LCS_GDT L 89 L 89 5 7 15 4 4 6 8 10 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT T 90 T 90 5 7 20 4 4 5 8 10 12 14 17 21 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT A 91 A 91 5 7 20 3 4 6 10 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT D 92 D 92 4 4 20 3 3 4 4 6 10 11 16 20 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT T 93 T 93 4 5 20 3 3 4 4 6 9 11 17 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT L 94 L 94 4 5 20 1 3 4 6 7 11 15 19 22 25 27 31 35 37 42 44 49 51 54 55 LCS_GDT K 95 K 95 4 5 20 3 3 4 4 7 8 10 13 13 16 18 22 26 32 37 43 46 51 54 55 LCS_GDT P 96 P 96 4 5 20 3 4 4 5 7 10 11 13 14 14 18 19 19 21 27 29 36 39 42 46 LCS_GDT G 97 G 97 4 7 20 3 3 4 5 7 10 12 13 15 17 18 19 19 21 23 28 31 34 39 42 LCS_GDT A 98 A 98 4 7 20 0 3 4 4 7 10 12 13 15 17 18 19 19 20 23 28 31 33 39 42 LCS_GDT S 99 S 99 5 7 20 4 4 5 6 7 10 11 13 13 17 18 19 19 22 24 28 31 33 39 42 LCS_GDT V 100 V 100 5 7 20 4 4 5 6 7 10 12 13 15 17 18 19 19 22 23 28 31 33 36 39 LCS_GDT E 101 E 101 5 7 20 4 4 5 5 7 10 12 13 15 17 18 19 20 22 24 28 31 35 39 43 LCS_GDT G 102 G 102 5 7 20 3 4 5 6 7 10 11 13 15 17 18 19 20 24 28 31 39 40 42 43 LCS_GDT D 103 D 103 5 7 20 4 4 5 6 7 10 12 13 15 17 19 23 28 32 37 38 40 42 44 47 LCS_GDT A 104 A 104 5 7 20 4 4 5 6 8 10 12 13 15 17 18 20 20 28 34 38 40 42 44 47 LCS_GDT I 105 I 105 5 7 20 4 4 5 6 8 10 11 13 14 15 17 20 33 34 37 38 42 45 48 51 LCS_GDT F 106 F 106 5 6 20 4 4 5 6 8 10 11 13 15 19 24 29 35 37 42 44 49 50 54 55 LCS_GDT A 107 A 107 5 6 20 4 4 5 6 8 10 10 13 14 18 25 29 33 37 42 44 49 51 54 55 LCS_GDT S 108 S 108 5 6 20 3 4 5 6 7 8 10 16 18 20 27 31 35 37 42 44 49 51 54 55 LCS_GDT E 109 E 109 3 6 20 3 3 4 6 8 10 11 16 18 22 27 31 35 37 41 44 49 51 54 55 LCS_GDT D 110 D 110 3 6 16 3 3 4 4 6 7 12 15 18 22 25 31 35 37 39 43 49 51 54 55 LCS_GDT D 111 D 111 3 5 16 3 3 4 5 8 10 10 13 14 17 20 25 28 31 35 42 45 49 54 55 LCS_GDT A 112 A 112 3 5 16 3 3 4 5 6 10 10 13 14 15 17 20 20 24 28 34 38 45 51 52 LCS_GDT V 113 V 113 3 5 16 3 3 4 5 6 8 10 13 15 19 21 24 27 32 35 41 44 46 54 55 LCS_GDT Y 114 Y 114 4 6 16 0 4 4 6 8 10 10 13 17 19 23 26 29 32 34 39 44 46 52 55 LCS_GDT G 115 G 115 4 6 16 3 4 4 5 6 8 10 12 14 14 16 26 27 32 32 37 40 46 49 55 LCS_GDT A 116 A 116 4 7 16 3 3 4 5 7 12 15 17 21 22 25 29 35 37 39 43 49 50 54 55 LCS_GDT S 117 S 117 4 7 16 3 3 5 6 9 12 13 17 20 22 25 29 31 32 37 41 44 47 54 55 LCS_GDT L 118 L 118 4 7 16 3 4 4 5 7 8 10 12 14 14 15 17 24 26 33 41 43 46 49 55 LCS_GDT V 119 V 119 4 7 16 3 4 4 5 7 8 10 12 14 14 15 17 18 19 22 23 24 24 26 34 LCS_GDT R 120 R 120 4 7 16 3 4 4 5 7 8 10 12 14 14 15 16 18 19 22 23 24 26 31 33 LCS_GDT L 121 L 121 4 7 16 3 4 4 5 7 8 10 12 14 14 15 16 18 19 22 23 24 24 26 26 LCS_GDT S 122 S 122 4 7 16 3 4 4 5 7 8 10 12 14 14 15 16 17 19 20 21 24 24 26 26 LCS_AVERAGE LCS_A: 9.44 ( 4.62 6.52 17.18 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 10 11 12 15 19 22 25 27 31 35 37 42 44 49 51 54 55 GDT PERCENT_AT 3.92 5.88 6.86 9.80 10.78 11.76 14.71 18.63 21.57 24.51 26.47 30.39 34.31 36.27 41.18 43.14 48.04 50.00 52.94 53.92 GDT RMS_LOCAL 0.16 0.65 0.83 1.65 1.72 1.87 2.41 2.93 3.14 3.53 3.71 4.45 4.66 4.86 5.31 5.44 5.92 6.43 6.53 6.58 GDT RMS_ALL_AT 18.74 20.06 18.62 15.86 15.93 15.93 15.54 15.54 15.58 15.47 15.40 15.98 15.15 15.17 15.44 15.59 15.80 16.48 16.03 15.95 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA D 25 D 25 14.447 4 0.149 0.149 16.568 0.000 0.000 LGA A 26 A 26 9.384 1 0.026 0.026 11.833 0.357 0.286 LGA V 27 V 27 9.271 3 0.011 0.011 9.271 8.929 5.102 LGA M 28 M 28 6.733 4 0.025 0.025 8.134 12.381 6.190 LGA V 29 V 29 3.063 3 0.232 0.232 3.782 57.738 32.993 LGA F 30 F 30 2.119 7 0.027 0.027 5.193 49.762 18.095 LGA A 31 A 31 7.453 1 0.055 0.055 7.453 18.929 15.143 LGA R 32 R 32 10.216 7 0.636 0.636 13.088 1.190 0.433 LGA Q 33 Q 33 11.358 5 0.665 0.665 13.570 0.000 0.000 LGA G 34 G 34 14.144 0 0.674 0.674 16.077 0.000 0.000 LGA D 35 D 35 20.422 4 0.566 0.566 20.783 0.000 0.000 LGA K 36 K 36 22.257 5 0.632 0.632 24.373 0.000 0.000 LGA G 37 G 37 21.843 0 0.525 0.525 22.012 0.000 0.000 LGA S 38 S 38 24.078 2 0.563 0.563 26.835 0.000 0.000 LGA V 39 V 39 29.550 3 0.634 0.634 29.791 0.000 0.000 LGA S 40 S 40 30.762 2 0.584 0.584 32.270 0.000 0.000 LGA V 41 V 41 30.388 3 0.589 0.589 31.572 0.000 0.000 LGA G 42 G 42 34.991 0 0.408 0.408 34.991 0.000 0.000 LGA D 43 D 43 35.015 4 0.255 0.255 35.140 0.000 0.000 LGA K 44 K 44 29.676 5 0.249 0.249 31.735 0.000 0.000 LGA H 45 H 45 26.634 6 0.540 0.540 26.634 0.000 0.000 LGA F 46 F 46 23.151 7 0.627 0.627 26.295 0.000 0.000 LGA R 47 R 47 26.403 7 0.483 0.483 26.403 0.000 0.000 LGA T 48 T 48 24.463 3 0.064 0.064 25.192 0.000 0.000 LGA Q 49 Q 49 23.575 5 0.156 0.156 23.818 0.000 0.000 LGA A 50 A 50 20.361 1 0.028 0.028 21.985 0.000 0.000 LGA F 51 F 51 17.169 7 0.074 0.074 17.761 0.000 0.000 LGA K 52 K 52 14.992 5 0.080 0.080 16.172 0.000 0.000 LGA V 53 V 53 9.235 3 0.031 0.031 11.096 0.714 0.408 LGA R 54 R 54 8.656 7 0.078 0.078 8.656 6.429 2.338 LGA L 55 L 55 8.056 4 0.493 0.493 8.056 12.619 6.310 LGA V 56 V 56 3.676 3 0.561 0.561 6.259 33.690 19.252 LGA N 57 N 57 4.021 4 0.569 0.569 4.409 43.571 21.786 LGA A 58 A 58 4.081 1 0.588 0.588 6.226 35.357 28.286 LGA A 59 A 59 2.867 1 0.100 0.100 4.901 47.262 37.810 LGA K 60 K 60 6.087 5 0.131 0.131 7.019 21.190 9.418 LGA S 61 S 61 3.678 2 0.680 0.680 4.904 39.048 26.032 LGA E 62 E 62 7.046 5 0.668 0.668 7.046 15.714 6.984 LGA I 63 I 63 3.092 4 0.063 0.063 4.145 52.262 26.131 LGA S 64 S 64 2.173 2 0.033 0.033 2.269 70.952 47.302 LGA L 65 L 65 4.434 4 0.678 0.678 5.567 36.429 18.214 LGA K 66 K 66 1.961 5 0.256 0.256 2.586 68.929 30.635 LGA N 67 N 67 2.486 4 0.517 0.517 4.951 54.524 27.262 LGA S 68 S 68 2.790 2 0.217 0.217 2.790 73.452 48.968 LGA C 69 C 69 1.143 2 0.117 0.117 2.515 77.619 51.746 LGA L 70 L 70 2.490 4 0.062 0.062 4.257 59.881 29.940 LGA V 71 V 71 3.311 3 0.047 0.047 3.311 69.405 39.660 LGA A 72 A 72 3.229 1 0.070 0.070 7.084 33.690 26.952 LGA Q 73 Q 73 6.340 5 0.043 0.043 6.340 29.762 13.228 LGA S 74 S 74 6.915 2 0.621 0.621 8.496 8.214 5.476 LGA A 75 A 75 10.957 1 0.610 0.610 15.283 0.357 0.286 LGA A 76 A 76 16.849 1 0.595 0.595 19.476 0.000 0.000 LGA G 77 G 77 20.459 0 0.454 0.454 21.875 0.000 0.000 LGA Q 78 Q 78 21.838 5 0.649 0.649 21.838 0.000 0.000 LGA S 79 S 79 17.863 2 0.697 0.697 19.562 0.000 0.000 LGA F 80 F 80 18.345 7 0.621 0.621 18.345 0.000 0.000 LGA R 81 R 81 16.603 7 0.528 0.528 17.222 0.000 0.000 LGA L 82 L 82 10.358 4 0.656 0.656 12.615 0.000 0.000 LGA D 83 D 83 12.632 4 0.037 0.037 13.551 0.000 0.000 LGA T 84 T 84 13.548 3 0.619 0.619 13.548 0.000 0.000 LGA V 85 V 85 10.357 3 0.546 0.546 11.335 0.357 0.204 LGA D 86 D 86 8.181 4 0.664 0.664 8.181 11.667 5.833 LGA E 87 E 87 5.363 5 0.283 0.283 6.559 33.214 14.762 LGA E 88 E 88 0.743 5 0.035 0.035 2.391 75.238 33.439 LGA L 89 L 89 4.276 4 0.264 0.264 5.383 37.619 18.810 LGA T 90 T 90 5.084 3 0.166 0.166 5.084 37.619 21.497 LGA A 91 A 91 1.550 1 0.526 0.526 2.598 68.929 55.143 LGA D 92 D 92 5.671 4 0.292 0.292 8.514 21.190 10.595 LGA T 93 T 93 4.706 3 0.525 0.525 4.706 49.524 28.299 LGA L 94 L 94 3.961 4 0.559 0.559 7.369 29.167 14.583 LGA K 95 K 95 10.542 5 0.543 0.543 13.330 1.786 0.794 LGA P 96 P 96 14.808 3 0.076 0.076 17.186 0.000 0.000 LGA G 97 G 97 19.682 0 0.677 0.677 19.682 0.000 0.000 LGA A 98 A 98 17.837 1 0.203 0.203 18.684 0.000 0.000 LGA S 99 S 99 18.885 2 0.671 0.671 20.725 0.000 0.000 LGA V 100 V 100 16.708 3 0.084 0.084 16.789 0.000 0.000 LGA E 101 E 101 14.093 5 0.078 0.078 16.099 0.000 0.000 LGA G 102 G 102 14.672 0 0.177 0.177 14.672 0.000 0.000 LGA D 103 D 103 11.900 4 0.028 0.028 13.891 0.000 0.000 LGA A 104 A 104 13.084 1 0.610 0.610 13.084 0.000 0.000 LGA I 105 I 105 11.683 4 0.056 0.056 12.141 0.000 0.000 LGA F 106 F 106 9.637 7 0.075 0.075 10.661 0.238 0.087 LGA A 107 A 107 13.767 1 0.068 0.068 14.155 0.000 0.000 LGA S 108 S 108 15.562 2 0.082 0.082 16.560 0.000 0.000 LGA E 109 E 109 18.446 5 0.447 0.447 18.533 0.000 0.000 LGA D 110 D 110 17.468 4 0.442 0.442 17.468 0.000 0.000 LGA D 111 D 111 17.580 4 0.471 0.471 18.123 0.000 0.000 LGA A 112 A 112 20.683 1 0.312 0.312 20.683 0.000 0.000 LGA V 113 V 113 14.095 3 0.644 0.644 16.240 0.000 0.000 LGA Y 114 Y 114 10.593 8 0.675 0.675 12.657 0.000 0.000 LGA G 115 G 115 11.891 0 0.709 0.709 11.891 0.119 0.119 LGA A 116 A 116 6.532 1 0.284 0.284 8.223 9.643 7.714 LGA S 117 S 117 8.226 2 0.377 0.377 11.932 4.643 3.095 LGA L 118 L 118 10.928 4 0.613 0.613 12.284 0.714 0.357 LGA V 119 V 119 14.246 3 0.072 0.072 15.565 0.000 0.000 LGA R 120 R 120 19.134 7 0.117 0.117 21.340 0.000 0.000 LGA L 121 L 121 23.913 4 0.046 0.046 25.585 0.000 0.000 LGA S 122 S 122 28.906 2 0.233 0.233 31.350 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 98 392 392 100.00 718 392 54.60 102 SUMMARY(RMSD_GDC): 14.509 14.417 14.417 13.941 8.020 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 118 102 4.0 19 2.93 19.363 15.743 0.627 LGA_LOCAL RMSD: 2.931 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.536 Number of assigned atoms: 98 Std_ASGN_ATOMS RMSD: 14.509 Standard rmsd on all 98 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.997995 * X + -0.044841 * Y + -0.044670 * Z + -12.229483 Y_new = -0.054927 * X + -0.262882 * Y + -0.963263 * Z + 93.781731 Z_new = 0.031451 * X + 0.963785 * Y + -0.264818 * Z + -24.313955 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.054982 -0.031456 1.838947 [DEG: -3.1502 -1.8023 105.3639 ] ZXZ: -0.046340 1.838811 0.032621 [DEG: -2.6551 105.3561 1.8691 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0574TS328_1-D1 REMARK 2: T0574-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0574TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 118 102 4.0 19 2.93 15.743 14.51 REMARK ---------------------------------------------------------- MOLECULE T0574TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0574 REMARK MODEL 1 REMARK PARENT 1p4a_A ATOM 13 N MET 5 25.708 30.579 37.745 1.00 3.00 N ATOM 14 CA MET 5 26.683 29.527 37.546 1.00 3.00 C ATOM 15 C MET 5 26.404 28.749 36.253 1.00 3.00 C ATOM 16 O MET 5 27.299 28.547 35.436 1.00 3.00 O ATOM 17 N ALA 6 25.156 28.337 36.065 1.00 3.00 N ATOM 18 CA ALA 6 24.765 27.575 34.899 1.00 3.00 C ATOM 19 C ALA 6 25.090 28.314 33.596 1.00 3.00 C ATOM 20 O ALA 6 25.567 27.723 32.643 1.00 3.00 O ATOM 21 N LEU 7 24.800 29.603 33.558 1.00 3.00 N ATOM 22 CA LEU 7 25.097 30.412 32.378 1.00 3.00 C ATOM 23 C LEU 7 26.611 30.421 32.052 1.00 3.00 C ATOM 24 O LEU 7 26.999 30.241 30.904 1.00 3.00 O ATOM 25 N THR 8 27.449 30.587 33.076 1.00 3.00 N ATOM 26 CA THR 8 28.916 30.584 32.942 1.00 3.00 C ATOM 27 C THR 8 29.476 29.234 32.483 1.00 3.00 C ATOM 28 O THR 8 30.291 29.163 31.562 1.00 3.00 O ATOM 29 N LEU 9 29.064 28.157 33.140 1.00 3.00 N ATOM 30 CA LEU 9 29.556 26.841 32.760 1.00 3.00 C ATOM 31 C LEU 9 29.093 26.512 31.334 1.00 3.00 C ATOM 32 O LEU 9 29.875 26.027 30.522 1.00 3.00 O ATOM 33 N ALA 10 27.832 26.818 31.022 1.00 3.00 N ATOM 34 CA ALA 10 27.286 26.574 29.688 1.00 3.00 C ATOM 35 C ALA 10 28.078 27.288 28.603 1.00 3.00 C ATOM 36 O ALA 10 28.402 26.717 27.552 1.00 3.00 O ATOM 37 N GLY 11 28.388 28.553 28.865 1.00 3.00 N ATOM 38 CA GLY 11 29.176 29.355 27.958 1.00 3.00 C ATOM 39 C GLY 11 30.586 28.802 27.829 1.00 3.00 C ATOM 40 O GLY 11 31.158 28.807 26.754 1.00 3.00 O ATOM 41 N LEU 12 31.152 28.316 28.923 1.00 3.00 N ATOM 42 CA LEU 12 32.502 27.778 28.857 1.00 3.00 C ATOM 43 C LEU 12 32.513 26.543 27.945 1.00 3.00 C ATOM 44 O LEU 12 33.333 26.446 27.042 1.00 3.00 O ATOM 45 N LEU 13 31.579 25.627 28.184 1.00 3.00 N ATOM 46 CA LEU 13 31.404 24.447 27.353 1.00 3.00 C ATOM 47 C LEU 13 32.025 25.154 26.168 1.00 3.00 C ATOM 48 O LEU 13 33.019 24.672 25.619 1.00 3.00 O ATOM 49 N ALA 14 31.448 26.298 25.793 1.00 3.00 N ATOM 50 CA ALA 14 31.898 27.081 24.656 1.00 3.00 C ATOM 51 C ALA 14 33.161 27.869 24.858 1.00 3.00 C ATOM 52 O ALA 14 33.989 27.972 23.953 1.00 3.00 O ATOM 53 N ALA 15 33.355 28.403 26.048 1.00 3.00 N ATOM 54 CA ALA 15 34.531 29.212 26.272 1.00 3.00 C ATOM 55 C ALA 15 35.667 28.518 26.997 1.00 3.00 C ATOM 56 O ALA 15 36.770 28.434 26.458 1.00 3.00 O ATOM 57 N PRO 16 35.402 28.002 28.194 1.00 9.00 N ATOM 58 CA PRO 16 36.436 27.350 28.978 1.00 9.00 C ATOM 59 C PRO 16 36.935 26.052 28.360 1.00 9.00 C ATOM 60 O PRO 16 38.113 25.793 28.397 1.00 9.00 O ATOM 61 N SER 17 36.041 25.238 27.789 1.00 9.00 N ATOM 62 CA SER 17 36.445 23.961 27.200 1.00 9.00 C ATOM 63 C SER 17 36.571 24.030 25.673 1.00 9.00 C ATOM 64 O SER 17 36.900 23.041 25.030 1.00 9.00 O ATOM 65 N LEU 18 36.275 25.188 25.092 1.00 3.00 N ATOM 66 CA LEU 18 36.394 25.413 23.661 1.00 3.00 C ATOM 67 C LEU 18 35.450 24.743 22.671 1.00 3.00 C ATOM 68 O LEU 18 35.757 24.685 21.460 1.00 3.00 O ATOM 69 N GLY 19 34.300 24.247 23.128 1.00 3.00 N ATOM 70 CA GLY 19 33.317 23.649 22.228 1.00 3.00 C ATOM 71 C GLY 19 32.659 24.800 21.465 1.00 3.00 C ATOM 72 O GLY 19 31.970 25.600 22.059 1.00 3.00 O ATOM 73 N PHE 20 32.864 24.895 20.150 1.00 3.00 N ATOM 74 CA PHE 20 32.232 26.009 19.426 1.00 3.00 C ATOM 75 C PHE 20 32.498 25.563 17.997 1.00 3.00 C ATOM 76 O PHE 20 31.633 25.678 17.130 1.00 3.00 O ATOM 77 N ALA 21 33.702 25.066 17.749 1.00 3.00 N ATOM 78 CA ALA 21 34.131 24.801 16.380 1.00 3.00 C ATOM 79 C ALA 21 33.881 23.356 15.964 1.00 3.00 C ATOM 80 O ALA 21 34.138 22.975 14.827 1.00 3.00 O ATOM 81 N ALA 22 33.369 22.548 16.881 1.00 3.00 N ATOM 82 CA ALA 22 33.046 21.170 16.540 1.00 3.00 C ATOM 83 C ALA 22 31.691 21.095 15.842 1.00 3.00 C ATOM 84 O ALA 22 30.872 22.018 15.925 1.00 3.00 O ATOM 85 N ALA 23 31.461 20.019 15.110 1.00 3.00 N ATOM 86 CA ALA 23 30.161 19.851 14.486 1.00 3.00 C ATOM 87 C ALA 23 29.293 19.188 15.547 1.00 3.00 C ATOM 88 O ALA 23 29.606 18.094 16.029 1.00 3.00 O ATOM 89 N PRO 24 28.255 19.882 15.971 1.00 3.00 N ATOM 90 CA PRO 24 27.403 19.394 17.058 1.00 3.00 C ATOM 91 C PRO 24 25.971 19.524 16.622 1.00 3.00 C ATOM 92 O PRO 24 25.532 20.618 16.285 1.00 3.00 O ATOM 93 N ASP 25 25.256 18.404 16.599 1.00 3.00 N ATOM 94 CA ASP 25 23.834 18.420 16.267 1.00 3.00 C ATOM 95 C ASP 25 22.982 18.472 17.516 1.00 3.00 C ATOM 96 O ASP 25 21.868 18.986 17.486 1.00 3.00 O ATOM 97 N ALA 26 23.515 17.950 18.616 1.00 3.00 N ATOM 98 CA ALA 26 22.710 17.741 19.808 1.00 3.00 C ATOM 99 C ALA 26 23.562 17.627 21.075 1.00 3.00 C ATOM 100 O ALA 26 24.725 17.183 21.047 1.00 3.00 O ATOM 101 N VAL 27 22.971 18.042 22.183 1.00 3.00 N ATOM 102 CA VAL 27 23.564 17.869 23.498 1.00 3.00 C ATOM 103 C VAL 27 22.810 16.752 24.211 1.00 3.00 C ATOM 104 O VAL 27 21.580 16.691 24.152 1.00 3.00 O ATOM 105 N MET 28 23.556 15.863 24.862 1.00 3.00 N ATOM 106 CA MET 28 22.981 14.699 25.527 1.00 3.00 C ATOM 107 C MET 28 23.394 14.634 26.985 1.00 3.00 C ATOM 108 O MET 28 24.539 14.930 27.353 1.00 3.00 O ATOM 109 N VAL 29 22.455 14.246 27.830 1.00 3.00 N ATOM 110 CA VAL 29 22.789 14.062 29.229 1.00 3.00 C ATOM 111 C VAL 29 21.813 13.047 29.812 1.00 3.00 C ATOM 112 O VAL 29 20.829 12.690 29.160 1.00 3.00 O ATOM 113 N PHE 30 22.133 12.537 30.993 1.00 3.00 N ATOM 114 CA PHE 30 21.258 11.624 31.721 1.00 3.00 C ATOM 115 C PHE 30 20.650 12.350 32.911 1.00 3.00 C ATOM 116 O PHE 30 21.341 13.089 33.617 1.00 3.00 O ATOM 117 N ALA 31 19.353 12.144 33.116 1.00 3.00 N ATOM 118 CA ALA 31 18.635 12.671 34.267 1.00 3.00 C ATOM 119 C ALA 31 19.455 12.367 35.519 1.00 3.00 C ATOM 120 O ALA 31 20.024 11.281 35.615 1.00 3.00 O ATOM 121 N ARG 32 19.505 13.278 36.494 1.00 3.00 N ATOM 122 CA ARG 32 18.577 14.388 36.629 1.00 3.00 C ATOM 123 C ARG 32 19.221 15.760 36.899 1.00 3.00 C ATOM 124 O ARG 32 18.809 16.778 36.325 1.00 3.00 O ATOM 125 N GLN 33 20.203 15.781 37.795 1.00 3.00 N ATOM 126 CA GLN 33 20.770 17.022 38.341 1.00 3.00 C ATOM 127 C GLN 33 21.481 17.887 37.313 1.00 3.00 C ATOM 128 O GLN 33 21.520 19.100 37.454 1.00 3.00 O ATOM 129 N GLY 34 22.065 17.256 36.303 1.00 3.00 N ATOM 130 CA GLY 34 22.798 17.979 35.278 1.00 3.00 C ATOM 131 C GLY 34 21.991 18.390 34.060 1.00 3.00 C ATOM 132 O GLY 34 22.552 18.910 33.100 1.00 3.00 O ATOM 133 N ASP 35 20.678 18.167 34.085 1.00 3.00 N ATOM 134 CA ASP 35 19.833 18.556 32.943 1.00 3.00 C ATOM 135 C ASP 35 19.883 20.074 32.661 1.00 3.00 C ATOM 136 O ASP 35 20.065 20.486 31.514 1.00 3.00 O ATOM 137 N LYS 36 19.737 20.920 33.678 1.00 3.00 N ATOM 138 CA LYS 36 19.859 22.368 33.443 1.00 3.00 C ATOM 139 C LYS 36 21.190 22.774 32.784 1.00 3.00 C ATOM 140 O LYS 36 21.192 23.609 31.865 1.00 3.00 O ATOM 141 N GLY 37 22.292 22.197 33.253 1.00 3.00 N ATOM 142 CA GLY 37 23.610 22.383 32.644 1.00 3.00 C ATOM 143 C GLY 37 23.639 22.045 31.148 1.00 3.00 C ATOM 144 O GLY 37 24.191 22.798 30.340 1.00 3.00 O ATOM 145 N SER 38 23.052 20.902 30.792 1.00 3.00 N ATOM 146 CA SER 38 22.948 20.486 29.404 1.00 3.00 C ATOM 147 C SER 38 22.221 21.553 28.611 1.00 3.00 C ATOM 148 O SER 38 22.665 21.931 27.525 1.00 3.00 O ATOM 149 N VAL 39 21.115 22.062 29.165 1.00 3.00 N ATOM 150 CA VAL 39 20.332 23.090 28.472 1.00 3.00 C ATOM 151 C VAL 39 21.091 24.405 28.345 1.00 3.00 C ATOM 152 O VAL 39 20.972 25.089 27.349 1.00 3.00 O ATOM 153 N SER 40 21.862 24.757 29.365 1.00 3.00 N ATOM 154 CA SER 40 22.601 26.006 29.311 1.00 3.00 C ATOM 155 C SER 40 23.593 25.936 28.151 1.00 3.00 C ATOM 156 O SER 40 23.644 26.852 27.343 1.00 3.00 O ATOM 157 N VAL 41 24.377 24.855 28.091 1.00 3.00 N ATOM 158 CA VAL 41 25.326 24.644 26.998 1.00 3.00 C ATOM 159 C VAL 41 24.552 24.446 25.695 1.00 3.00 C ATOM 160 O VAL 41 24.960 24.908 24.636 1.00 3.00 O ATOM 161 N GLY 42 23.405 23.761 25.755 1.00 3.00 N ATOM 162 CA GLY 42 22.651 23.383 24.559 1.00 3.00 C ATOM 163 C GLY 42 21.961 24.603 23.994 1.00 3.00 C ATOM 164 O GLY 42 21.998 24.845 22.801 1.00 3.00 O ATOM 165 N ASP 43 21.322 25.417 24.812 1.00 3.00 N ATOM 166 CA ASP 43 20.698 26.627 24.312 1.00 3.00 C ATOM 167 C ASP 43 21.787 27.693 24.285 1.00 3.00 C ATOM 168 O ASP 43 21.930 28.411 23.306 1.00 3.00 O ATOM 169 N LYS 44 22.572 27.763 25.346 1.00 9.00 N ATOM 170 CA LYS 44 23.630 28.740 25.438 1.00 9.00 C ATOM 171 C LYS 44 24.973 28.015 25.273 1.00 9.00 C ATOM 172 O LYS 44 25.614 27.723 26.277 1.00 9.00 O ATOM 173 N HIS 45 25.668 28.296 24.164 1.00 3.00 N ATOM 174 CA HIS 45 25.103 28.576 22.852 1.00 3.00 C ATOM 175 C HIS 45 25.292 27.542 21.771 1.00 3.00 C ATOM 176 O HIS 45 25.591 27.892 20.602 1.00 3.00 O ATOM 177 N PHE 46 25.117 26.256 22.065 1.00 3.00 N ATOM 178 CA PHE 46 25.144 25.295 20.978 1.00 3.00 C ATOM 179 C PHE 46 24.040 25.622 19.960 1.00 3.00 C ATOM 180 O PHE 46 24.238 25.413 18.765 1.00 3.00 O ATOM 181 N ARG 47 22.907 26.197 20.357 1.00 3.00 N ATOM 182 CA ARG 47 21.832 26.485 19.453 1.00 3.00 C ATOM 183 C ARG 47 21.541 25.097 18.917 1.00 3.00 C ATOM 184 O ARG 47 21.342 24.914 17.708 1.00 3.00 O ATOM 185 N THR 48 21.497 24.121 19.815 1.00 3.00 N ATOM 186 CA THR 48 21.095 22.773 19.437 1.00 3.00 C ATOM 187 C THR 48 20.068 22.245 20.437 1.00 3.00 C ATOM 188 O THR 48 19.996 22.713 21.577 1.00 3.00 O ATOM 189 N GLN 49 19.304 21.243 20.020 1.00 3.00 N ATOM 190 CA GLN 49 18.412 20.534 20.938 1.00 3.00 C ATOM 191 C GLN 49 19.194 19.747 21.981 1.00 3.00 C ATOM 192 O GLN 49 20.373 19.430 21.798 1.00 3.00 O ATOM 193 N ALA 50 18.512 19.447 23.075 1.00 3.00 N ATOM 194 CA ALA 50 18.993 18.539 24.095 1.00 3.00 C ATOM 195 C ALA 50 18.207 17.244 24.017 1.00 3.00 C ATOM 196 O ALA 50 17.009 17.242 23.729 1.00 3.00 O ATOM 197 N PHE 51 18.888 16.131 24.234 1.00 3.00 N ATOM 198 CA PHE 51 18.222 14.856 24.290 1.00 3.00 C ATOM 199 C PHE 51 18.493 14.310 25.688 1.00 3.00 C ATOM 200 O PHE 51 19.640 14.278 26.129 1.00 3.00 O ATOM 201 N LYS 52 17.446 13.924 26.409 1.00 3.00 N ATOM 202 CA LYS 52 17.641 13.438 27.763 1.00 3.00 C ATOM 203 C LYS 52 17.507 11.932 27.764 1.00 3.00 C ATOM 204 O LYS 52 16.470 11.396 27.374 1.00 3.00 O ATOM 205 N VAL 53 18.559 11.253 28.188 1.00 3.00 N ATOM 206 CA VAL 53 18.551 9.803 28.297 1.00 3.00 C ATOM 207 C VAL 53 17.326 9.286 29.038 1.00 3.00 C ATOM 208 O VAL 53 16.913 9.879 30.037 1.00 3.00 O ATOM 209 N ARG 54 16.735 8.200 28.561 1.00 3.00 N ATOM 210 CA ARG 54 15.552 7.646 29.224 1.00 3.00 C ATOM 211 C ARG 54 15.644 6.139 29.438 1.00 3.00 C ATOM 212 O ARG 54 15.756 5.368 28.483 1.00 3.00 O ATOM 213 N LEU 55 15.574 5.734 30.699 1.00 3.00 N ATOM 214 CA LEU 55 15.618 4.333 31.086 1.00 3.00 C ATOM 215 C LEU 55 16.755 3.568 30.424 1.00 3.00 C ATOM 216 O LEU 55 16.599 2.411 30.054 1.00 3.00 O ATOM 217 N VAL 56 17.906 4.228 30.287 1.00 3.00 N ATOM 218 CA VAL 56 19.073 3.593 29.684 1.00 3.00 C ATOM 219 C VAL 56 18.962 3.188 28.231 1.00 3.00 C ATOM 220 O VAL 56 19.777 2.397 27.746 1.00 3.00 O ATOM 221 N ASN 57 17.960 3.702 27.517 1.00 3.00 N ATOM 222 CA ASN 57 17.798 3.364 26.107 1.00 3.00 C ATOM 223 C ASN 57 17.641 4.565 25.169 1.00 3.00 C ATOM 224 O ASN 57 18.500 4.793 24.307 1.00 3.00 O ATOM 225 N ALA 58 16.556 5.323 25.335 1.00 3.00 N ATOM 226 CA ALA 58 16.274 6.492 24.486 1.00 3.00 C ATOM 227 C ALA 58 15.354 5.954 23.403 1.00 3.00 C ATOM 228 O ALA 58 15.661 4.954 22.746 1.00 3.00 O ATOM 229 N ALA 59 14.207 6.593 23.234 1.00 3.00 N ATOM 230 CA ALA 59 13.342 6.259 22.117 1.00 3.00 C ATOM 231 C ALA 59 14.055 6.572 20.803 1.00 3.00 C ATOM 232 O ALA 59 14.810 7.550 20.702 1.00 3.00 O ATOM 233 N LYS 60 13.831 5.726 19.805 1.00 3.00 N ATOM 234 CA LYS 60 14.370 5.958 18.473 1.00 3.00 C ATOM 235 C LYS 60 13.789 7.242 17.898 1.00 3.00 C ATOM 236 O LYS 60 14.462 7.951 17.145 1.00 3.00 O ATOM 237 N SER 61 12.534 7.532 18.246 1.00 3.00 N ATOM 238 CA SER 61 11.906 8.793 17.832 1.00 3.00 C ATOM 239 C SER 61 12.438 10.032 18.583 1.00 3.00 C ATOM 240 O SER 61 12.059 11.153 18.251 1.00 3.00 O ATOM 241 N GLU 62 13.320 9.829 19.567 1.00 3.00 N ATOM 242 CA GLU 62 13.903 10.938 20.354 1.00 3.00 C ATOM 243 C GLU 62 15.250 11.456 19.855 1.00 3.00 C ATOM 244 O GLU 62 15.727 12.465 20.350 1.00 3.00 O ATOM 245 N ILE 63 15.869 10.775 18.897 1.00 3.00 N ATOM 246 CA ILE 63 17.179 11.207 18.415 1.00 3.00 C ATOM 247 C ILE 63 17.478 10.657 17.022 1.00 3.00 C ATOM 248 O ILE 63 17.184 9.506 16.739 1.00 3.00 O ATOM 249 N SER 64 18.064 11.475 16.153 1.00 3.00 N ATOM 250 CA SER 64 18.360 11.021 14.795 1.00 3.00 C ATOM 251 C SER 64 19.612 10.172 14.767 1.00 3.00 C ATOM 252 O SER 64 20.550 10.421 15.518 1.00 3.00 O ATOM 253 N LEU 65 19.626 9.172 13.889 1.00 3.00 N ATOM 254 CA LEU 65 20.819 8.365 13.660 1.00 3.00 C ATOM 255 C LEU 65 21.861 9.241 12.972 1.00 3.00 C ATOM 256 O LEU 65 21.509 10.233 12.353 1.00 3.00 O ATOM 257 N LYS 66 23.139 8.895 13.089 1.00 3.00 N ATOM 258 CA LYS 66 24.185 9.726 12.515 1.00 3.00 C ATOM 259 C LYS 66 24.511 11.048 13.226 1.00 3.00 C ATOM 260 O LYS 66 25.417 11.751 12.789 1.00 3.00 O ATOM 261 N ASN 67 23.811 11.388 14.315 1.00 3.00 N ATOM 262 CA ASN 67 24.060 12.665 15.019 1.00 3.00 C ATOM 263 C ASN 67 25.462 12.843 15.607 1.00 3.00 C ATOM 264 O ASN 67 26.030 11.897 16.140 1.00 3.00 O ATOM 265 N SER 68 25.988 14.072 15.540 1.00 3.00 N ATOM 266 CA SER 68 27.184 14.469 16.296 1.00 3.00 C ATOM 267 C SER 68 26.839 15.030 17.689 1.00 3.00 C ATOM 268 O SER 68 26.172 16.070 17.817 1.00 3.00 O ATOM 269 N CYS 69 27.329 14.364 18.727 1.00 3.00 N ATOM 270 CA CYS 69 26.776 14.526 20.064 1.00 3.00 C ATOM 271 C CYS 69 27.759 15.071 21.091 1.00 3.00 C ATOM 272 O CYS 69 28.822 14.510 21.304 1.00 3.00 O ATOM 273 N LEU 70 27.377 16.152 21.753 1.00 3.00 N ATOM 274 CA LEU 70 28.141 16.637 22.889 1.00 3.00 C ATOM 275 C LEU 70 27.469 16.121 24.148 1.00 3.00 C ATOM 276 O LEU 70 26.325 16.468 24.440 1.00 3.00 O ATOM 277 N VAL 71 28.181 15.267 24.874 1.00 3.00 N ATOM 278 CA VAL 71 27.691 14.708 26.124 1.00 3.00 C ATOM 279 C VAL 71 28.065 15.679 27.251 1.00 3.00 C ATOM 280 O VAL 71 29.202 16.148 27.324 1.00 3.00 O ATOM 281 N ALA 72 27.097 16.003 28.102 1.00 3.00 N ATOM 282 CA ALA 72 27.320 16.887 29.242 1.00 3.00 C ATOM 283 C ALA 72 26.947 16.162 30.537 1.00 3.00 C ATOM 284 O ALA 72 25.912 15.500 30.618 1.00 3.00 O ATOM 285 N GLN 73 27.788 16.283 31.551 1.00 3.00 N ATOM 286 CA GLN 73 27.580 15.573 32.801 1.00 3.00 C ATOM 287 C GLN 73 28.022 16.467 33.960 1.00 3.00 C ATOM 288 O GLN 73 28.962 17.235 33.829 1.00 3.00 O ATOM 289 N SER 74 27.346 16.371 35.095 1.00 3.00 N ATOM 290 CA SER 74 27.686 17.235 36.213 1.00 3.00 C ATOM 291 C SER 74 28.820 16.662 37.061 1.00 3.00 C ATOM 292 O SER 74 29.740 17.374 37.465 1.00 3.00 O ATOM 293 N ALA 75 28.759 15.371 37.326 1.00 3.00 N ATOM 294 CA ALA 75 29.688 14.783 38.265 1.00 3.00 C ATOM 295 C ALA 75 30.057 13.388 37.794 1.00 3.00 C ATOM 296 O ALA 75 29.252 12.475 37.826 1.00 3.00 O ATOM 297 N ALA 76 31.284 13.237 37.328 1.00 3.00 N ATOM 298 CA ALA 76 31.754 11.948 36.871 1.00 3.00 C ATOM 299 C ALA 76 32.520 11.257 37.996 1.00 3.00 C ATOM 300 O ALA 76 33.595 11.712 38.389 1.00 3.00 O ATOM 301 N GLY 77 31.966 10.161 38.509 1.00 3.00 N ATOM 302 CA GLY 77 32.660 9.358 39.514 1.00 3.00 C ATOM 303 C GLY 77 33.632 8.372 38.868 1.00 3.00 C ATOM 304 O GLY 77 34.834 8.634 38.799 1.00 3.00 O ATOM 305 N GLN 78 33.123 7.244 38.386 1.00 3.00 N ATOM 306 CA GLN 78 34.004 6.199 37.866 1.00 3.00 C ATOM 307 C GLN 78 33.913 6.048 36.353 1.00 3.00 C ATOM 308 O GLN 78 34.714 5.323 35.748 1.00 3.00 O ATOM 309 N SER 79 32.937 6.718 35.744 1.00 3.00 N ATOM 310 CA SER 79 32.854 6.771 34.297 1.00 3.00 C ATOM 311 C SER 79 31.888 5.801 33.639 1.00 3.00 C ATOM 312 O SER 79 31.751 5.799 32.414 1.00 3.00 O ATOM 313 N PHE 80 31.223 4.976 34.442 1.00 3.00 N ATOM 314 CA PHE 80 30.243 4.037 33.923 1.00 3.00 C ATOM 315 C PHE 80 29.073 4.714 33.210 1.00 3.00 C ATOM 316 O PHE 80 28.586 4.227 32.190 1.00 3.00 O ATOM 317 N ARG 81 28.613 5.836 33.749 1.00 3.00 N ATOM 318 CA ARG 81 27.488 6.554 33.153 1.00 3.00 C ATOM 319 C ARG 81 27.844 7.073 31.770 1.00 3.00 C ATOM 320 O ARG 81 27.130 6.809 30.800 1.00 3.00 O ATOM 321 N LEU 82 28.954 7.801 31.668 1.00 3.00 N ATOM 322 CA LEU 82 29.370 8.337 30.375 1.00 3.00 C ATOM 323 C LEU 82 29.676 7.234 29.353 1.00 3.00 C ATOM 324 O LEU 82 29.345 7.382 28.175 1.00 3.00 O ATOM 325 N ASP 83 30.281 6.133 29.804 1.00 3.00 N ATOM 326 CA ASP 83 30.496 4.963 28.942 1.00 3.00 C ATOM 327 C ASP 83 29.223 4.222 28.556 1.00 3.00 C ATOM 328 O ASP 83 29.022 3.884 27.385 1.00 3.00 O ATOM 329 N THR 84 28.373 3.963 29.544 1.00 3.00 N ATOM 330 CA THR 84 27.128 3.236 29.309 1.00 3.00 C ATOM 331 C THR 84 26.180 3.932 28.349 1.00 3.00 C ATOM 332 O THR 84 25.567 3.267 27.499 1.00 3.00 O ATOM 333 N VAL 85 26.047 5.256 28.446 1.00 3.00 N ATOM 334 CA VAL 85 25.116 5.968 27.584 1.00 3.00 C ATOM 335 C VAL 85 25.695 6.674 26.371 1.00 3.00 C ATOM 336 O VAL 85 25.368 6.338 25.225 1.00 3.00 O ATOM 337 N ASP 86 26.547 7.657 26.593 1.00 9.00 N ATOM 338 CA ASP 86 27.085 8.443 25.493 1.00 9.00 C ATOM 339 C ASP 86 27.816 7.622 24.427 1.00 9.00 C ATOM 340 O ASP 86 27.875 8.010 23.259 1.00 9.00 O ATOM 341 N GLU 87 28.369 6.479 24.823 1.00 3.00 N ATOM 342 CA GLU 87 29.234 5.707 24.037 1.00 3.00 C ATOM 343 C GLU 87 28.861 4.519 23.163 1.00 3.00 C ATOM 344 O GLU 87 28.394 4.675 22.031 1.00 3.00 O ATOM 345 N GLU 88 29.054 3.331 23.707 1.00 3.00 N ATOM 346 CA GLU 88 28.702 2.099 23.014 1.00 3.00 C ATOM 347 C GLU 88 27.222 2.163 22.606 1.00 3.00 C ATOM 348 O GLU 88 26.826 1.613 21.577 1.00 3.00 O ATOM 349 N LEU 89 26.411 2.872 23.398 1.00 3.00 N ATOM 350 CA LEU 89 24.972 2.993 23.136 1.00 3.00 C ATOM 351 C LEU 89 24.623 4.113 22.136 1.00 3.00 C ATOM 352 O LEU 89 23.900 3.870 21.164 1.00 3.00 O ATOM 353 N THR 90 25.118 5.316 22.363 1.00 9.00 N ATOM 354 CA THR 90 24.821 6.440 21.479 1.00 9.00 C ATOM 355 C THR 90 25.471 6.290 20.117 1.00 9.00 C ATOM 356 O THR 90 25.010 6.880 19.133 1.00 9.00 O ATOM 357 N ALA 91 26.528 5.504 20.055 1.00 3.00 N ATOM 358 CA ALA 91 27.244 5.312 18.817 1.00 3.00 C ATOM 359 C ALA 91 26.835 4.074 18.049 1.00 3.00 C ATOM 360 O ALA 91 26.248 4.161 16.972 1.00 3.00 O ATOM 361 N ASP 92 27.140 2.903 18.612 1.00 3.00 N ATOM 362 CA ASP 92 26.827 1.644 17.975 1.00 3.00 C ATOM 363 C ASP 92 25.409 1.157 18.259 1.00 3.00 C ATOM 364 O ASP 92 25.167 -0.042 18.408 1.00 3.00 O ATOM 365 N THR 93 24.485 2.104 18.343 1.00 3.00 N ATOM 366 CA THR 93 23.081 1.806 18.590 1.00 3.00 C ATOM 367 C THR 93 22.550 2.775 17.685 1.00 3.00 C ATOM 368 O THR 93 21.779 2.266 16.850 1.00 3.00 O ATOM 369 N LEU 94 22.839 4.073 17.739 1.00 3.00 N ATOM 370 CA LEU 94 22.301 5.056 16.809 1.00 3.00 C ATOM 371 C LEU 94 23.343 5.474 15.777 1.00 3.00 C ATOM 372 O LEU 94 23.105 6.402 15.002 1.00 3.00 O ATOM 373 N LYS 95 24.505 4.819 15.771 1.00 3.00 N ATOM 374 CA LYS 95 25.584 5.225 14.861 1.00 3.00 C ATOM 375 C LYS 95 25.905 6.714 15.031 1.00 3.00 C ATOM 376 O LYS 95 26.220 7.406 14.068 1.00 3.00 O ATOM 377 N PRO 96 25.807 7.199 16.267 1.00 3.00 N ATOM 378 CA PRO 96 26.121 8.589 16.579 1.00 3.00 C ATOM 379 C PRO 96 27.592 8.767 16.914 1.00 3.00 C ATOM 380 O PRO 96 28.271 7.822 17.329 1.00 3.00 O ATOM 381 N GLY 97 28.087 9.987 16.736 1.00 3.00 N ATOM 382 CA GLY 97 29.480 10.285 17.040 1.00 3.00 C ATOM 383 C GLY 97 29.599 11.128 18.287 1.00 3.00 C ATOM 384 O GLY 97 28.784 12.020 18.536 1.00 3.00 O ATOM 385 N ALA 98 30.615 10.851 19.081 1.00 3.00 N ATOM 386 CA ALA 98 30.881 11.676 20.248 1.00 3.00 C ATOM 387 C ALA 98 31.701 12.879 19.814 1.00 3.00 C ATOM 388 O ALA 98 32.900 12.764 19.595 1.00 3.00 O ATOM 389 N SER 99 31.057 14.030 19.680 1.00 3.00 N ATOM 390 CA SER 99 31.757 15.243 19.257 1.00 3.00 C ATOM 391 C SER 99 32.585 15.835 20.409 1.00 3.00 C ATOM 392 O SER 99 33.568 16.546 20.185 1.00 3.00 O ATOM 393 N VAL 100 32.184 15.530 21.641 1.00 3.00 N ATOM 394 CA VAL 100 32.910 15.997 22.808 1.00 3.00 C ATOM 395 C VAL 100 32.219 15.573 24.081 1.00 3.00 C ATOM 396 O VAL 100 31.081 15.098 24.056 1.00 3.00 O ATOM 397 N GLU 101 32.910 15.749 25.197 1.00 3.00 N ATOM 398 CA GLU 101 32.358 15.439 26.513 1.00 3.00 C ATOM 399 C GLU 101 32.759 16.520 27.497 1.00 3.00 C ATOM 400 O GLU 101 33.942 16.827 27.646 1.00 3.00 O ATOM 401 N GLY 102 31.784 17.096 28.175 1.00 3.00 N ATOM 402 CA GLY 102 32.091 18.077 29.189 1.00 3.00 C ATOM 403 C GLY 102 31.496 17.690 30.518 1.00 3.00 C ATOM 404 O GLY 102 30.305 17.375 30.605 1.00 3.00 O ATOM 405 N ASP 103 32.324 17.714 31.559 1.00 3.00 N ATOM 406 CA ASP 103 31.841 17.458 32.902 1.00 3.00 C ATOM 407 C ASP 103 32.263 18.590 33.829 1.00 3.00 C ATOM 408 O ASP 103 33.346 19.123 33.702 1.00 3.00 O ATOM 409 N ALA 104 31.382 18.984 34.742 1.00 3.00 N ATOM 410 CA ALA 104 31.702 20.063 35.667 1.00 3.00 C ATOM 411 C ALA 104 32.730 19.617 36.707 1.00 3.00 C ATOM 412 O ALA 104 33.736 20.300 36.935 1.00 3.00 O ATOM 413 N ILE 105 32.477 18.471 37.332 1.00 3.00 N ATOM 414 CA ILE 105 33.338 17.966 38.398 1.00 3.00 C ATOM 415 C ILE 105 33.650 16.501 38.166 1.00 3.00 C ATOM 416 O ILE 105 32.746 15.712 37.908 1.00 3.00 O ATOM 417 N PHE 106 34.926 16.141 38.278 1.00 3.00 N ATOM 418 CA PHE 106 35.347 14.750 38.171 1.00 3.00 C ATOM 419 C PHE 106 36.003 14.276 39.470 1.00 3.00 C ATOM 420 O PHE 106 36.721 15.034 40.128 1.00 3.00 O ATOM 421 N ALA 107 35.727 13.032 39.851 1.00 3.00 N ATOM 422 CA ALA 107 36.400 12.436 40.992 1.00 3.00 C ATOM 423 C ALA 107 37.797 12.026 40.569 1.00 3.00 C ATOM 424 O ALA 107 38.022 11.632 39.417 1.00 3.00 O ATOM 425 N SER 108 38.734 12.139 41.500 1.00 3.00 N ATOM 426 CA SER 108 40.092 11.671 41.273 1.00 3.00 C ATOM 427 C SER 108 40.077 10.168 41.037 1.00 3.00 C ATOM 428 O SER 108 39.288 9.444 41.647 1.00 3.00 O ATOM 429 N GLU 109 40.938 9.696 40.143 1.00 3.00 N ATOM 430 CA GLU 109 41.133 8.266 39.990 1.00 3.00 C ATOM 431 C GLU 109 40.457 7.648 38.782 1.00 3.00 C ATOM 432 O GLU 109 39.842 6.580 38.877 1.00 3.00 O ATOM 433 N ASP 110 40.563 8.325 37.644 1.00 3.00 N ATOM 434 CA ASP 110 40.150 7.737 36.379 1.00 3.00 C ATOM 435 C ASP 110 41.394 7.128 35.729 1.00 3.00 C ATOM 436 O ASP 110 41.984 7.708 34.816 1.00 3.00 O ATOM 437 N ASP 111 41.800 5.969 36.246 1.00 3.00 N ATOM 438 CA ASP 111 42.995 5.257 35.786 1.00 3.00 C ATOM 439 C ASP 111 43.010 5.125 34.268 1.00 3.00 C ATOM 440 O ASP 111 43.597 5.952 33.571 1.00 3.00 O ATOM 441 N ALA 112 42.364 4.075 33.766 1.00 3.00 N ATOM 442 CA ALA 112 42.186 3.882 32.331 1.00 3.00 C ATOM 443 C ALA 112 42.384 5.283 31.744 1.00 3.00 C ATOM 444 O ALA 112 43.513 5.653 31.401 1.00 3.00 O ATOM 445 N VAL 113 41.298 6.040 31.628 1.00 3.00 N ATOM 446 CA VAL 113 41.396 7.395 31.083 1.00 3.00 C ATOM 447 C VAL 113 40.303 8.346 31.574 1.00 3.00 C ATOM 448 O VAL 113 39.347 7.929 32.241 1.00 3.00 O ATOM 449 N TYR 114 40.487 9.639 31.284 1.00 3.00 N ATOM 450 CA TYR 114 39.537 10.666 31.698 1.00 3.00 C ATOM 451 C TYR 114 39.225 11.622 30.562 1.00 3.00 C ATOM 452 O TYR 114 39.962 11.698 29.584 1.00 3.00 O ATOM 453 N GLY 115 38.126 12.345 30.718 1.00 3.00 N ATOM 454 CA GLY 115 37.688 13.342 29.747 1.00 3.00 C ATOM 455 C GLY 115 36.784 14.342 30.466 1.00 3.00 C ATOM 456 O GLY 115 36.424 14.146 31.626 1.00 3.00 O ATOM 457 N ALA 116 36.404 15.409 29.786 1.00 3.00 N ATOM 458 CA ALA 116 35.558 16.396 30.415 1.00 3.00 C ATOM 459 C ALA 116 36.398 17.288 31.283 1.00 3.00 C ATOM 460 O ALA 116 37.573 17.496 31.013 1.00 3.00 O ATOM 461 N SER 117 35.800 17.825 32.343 1.00 3.00 N ATOM 462 CA SER 117 36.534 18.708 33.231 1.00 3.00 C ATOM 463 C SER 117 36.962 20.073 33.756 1.00 3.00 C ATOM 464 O SER 117 38.058 20.540 33.461 1.00 3.00 O ATOM 465 N LEU 118 36.105 20.725 34.533 1.00 3.00 N ATOM 466 CA LEU 118 36.482 22.019 35.078 1.00 3.00 C ATOM 467 C LEU 118 37.200 21.830 36.408 1.00 3.00 C ATOM 468 O LEU 118 38.241 22.446 36.658 1.00 3.00 O ATOM 469 N VAL 119 36.652 20.954 37.242 1.00 3.00 N ATOM 470 CA VAL 119 37.138 20.776 38.606 1.00 3.00 C ATOM 471 C VAL 119 37.373 19.308 38.928 1.00 3.00 C ATOM 472 O VAL 119 36.723 18.424 38.366 1.00 3.00 O ATOM 473 N ARG 120 38.297 19.053 39.845 1.00 3.00 N ATOM 474 CA ARG 120 38.555 17.701 40.317 1.00 3.00 C ATOM 475 C ARG 120 38.283 17.610 41.815 1.00 3.00 C ATOM 476 O ARG 120 38.703 18.477 42.581 1.00 3.00 O ATOM 477 N LEU 121 37.586 16.561 42.236 1.00 3.00 N ATOM 478 CA LEU 121 37.251 16.381 43.649 1.00 3.00 C ATOM 479 C LEU 121 37.955 15.160 44.247 1.00 3.00 C ATOM 480 O LEU 121 37.910 14.070 43.672 1.00 3.00 O ATOM 481 N SER 122 38.611 15.335 45.393 1.00 3.00 N ATOM 482 CA SER 122 39.244 14.197 46.067 1.00 3.00 C ATOM 483 C SER 122 38.948 14.124 47.570 1.00 3.00 C ATOM 484 O SER 122 37.852 14.468 48.013 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 392 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 90.30 39.2 194 96.0 202 ARMSMC SECONDARY STRUCTURE . . 89.08 43.4 113 99.1 114 ARMSMC SURFACE . . . . . . . . 95.40 36.3 135 95.1 142 ARMSMC BURIED . . . . . . . . 77.36 45.8 59 98.3 60 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 78 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 67 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 48 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 56 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 50 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 39 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 28 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 21 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 17 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 13 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 11 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 8 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 14.51 (Number of atoms: 98) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 14.51 98 96.1 102 CRMSCA CRN = ALL/NP . . . . . 0.1480 CRMSCA SECONDARY STRUCTURE . . 14.50 57 100.0 57 CRMSCA SURFACE . . . . . . . . 14.92 68 94.4 72 CRMSCA BURIED . . . . . . . . 13.52 30 100.0 30 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 14.42 392 77.9 503 CRMSMC SECONDARY STRUCTURE . . 14.55 228 80.9 282 CRMSMC SURFACE . . . . . . . . 14.82 272 76.8 354 CRMSMC BURIED . . . . . . . . 13.45 120 80.5 149 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 341 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 287 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 208 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 250 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 91 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 14.42 392 52.3 749 CRMSALL SECONDARY STRUCTURE . . 14.55 228 52.3 436 CRMSALL SURFACE . . . . . . . . 14.82 272 50.6 538 CRMSALL BURIED . . . . . . . . 13.45 120 56.9 211 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.618 0.597 0.299 98 96.1 102 ERRCA SECONDARY STRUCTURE . . 10.837 0.616 0.308 57 100.0 57 ERRCA SURFACE . . . . . . . . 10.963 0.603 0.301 68 94.4 72 ERRCA BURIED . . . . . . . . 9.835 0.585 0.292 30 100.0 30 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.545 0.597 0.299 392 77.9 503 ERRMC SECONDARY STRUCTURE . . 10.880 0.617 0.308 228 80.9 282 ERRMC SURFACE . . . . . . . . 10.903 0.603 0.301 272 76.8 354 ERRMC BURIED . . . . . . . . 9.733 0.585 0.292 120 80.5 149 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 341 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 287 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 208 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 250 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 91 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.545 0.597 0.299 392 52.3 749 ERRALL SECONDARY STRUCTURE . . 10.880 0.617 0.308 228 52.3 436 ERRALL SURFACE . . . . . . . . 10.903 0.603 0.301 272 50.6 538 ERRALL BURIED . . . . . . . . 9.733 0.585 0.292 120 56.9 211 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 2 17 98 102 DISTCA CA (P) 0.00 0.00 0.98 1.96 16.67 102 DISTCA CA (RMS) 0.00 0.00 2.93 3.01 7.44 DISTCA ALL (N) 0 0 1 7 70 392 749 DISTALL ALL (P) 0.00 0.00 0.13 0.93 9.35 749 DISTALL ALL (RMS) 0.00 0.00 2.93 4.12 7.46 DISTALL END of the results output