####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 86 ( 644), selected 86 , name T0572TS470_1-D1 # Molecule2: number of CA atoms 86 ( 1315), selected 86 , name T0572-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0572TS470_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 86 8 - 93 4.26 4.26 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 65 - 90 1.83 6.23 LCS_AVERAGE: 19.79 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 42 - 51 0.83 17.86 LONGEST_CONTINUOUS_SEGMENT: 10 54 - 63 0.92 6.31 LCS_AVERAGE: 8.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 86 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 8 L 8 3 14 86 0 5 7 17 26 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 9 S 9 7 14 86 1 6 15 22 32 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT K 10 K 10 7 14 86 7 12 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 11 S 11 7 14 86 8 12 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 12 V 12 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT P 13 P 13 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 14 V 14 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT K 15 K 15 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT L 16 L 16 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT E 17 E 17 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT L 18 L 18 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 19 T 19 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT G 20 G 20 9 14 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT D 21 D 21 8 14 86 5 5 8 16 22 34 40 47 50 52 71 77 84 85 85 85 86 86 86 86 LCS_GDT K 22 K 22 5 14 86 5 5 9 20 28 38 44 47 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT A 23 A 23 5 14 86 5 5 7 16 27 36 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 24 S 24 5 14 86 5 5 11 23 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT N 25 N 25 4 5 86 3 3 4 4 9 12 25 33 42 51 66 76 80 85 85 85 86 86 86 86 LCS_GDT V 26 V 26 4 5 86 3 3 4 5 11 19 28 43 49 61 71 77 84 85 85 85 86 86 86 86 LCS_GDT S 27 S 27 4 5 86 3 3 4 4 5 8 12 17 22 25 39 47 55 76 80 85 86 86 86 86 LCS_GDT S 28 S 28 4 5 86 3 3 10 22 33 38 43 47 50 58 71 76 84 85 85 85 86 86 86 86 LCS_GDT I 29 I 29 3 5 86 3 3 8 14 24 29 40 44 48 56 69 74 84 85 85 85 86 86 86 86 LCS_GDT S 30 S 30 3 4 86 5 11 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT Y 31 Y 31 3 4 86 3 11 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 32 S 32 5 10 86 1 6 17 27 33 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT F 33 F 33 5 10 86 4 12 15 24 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT D 34 D 34 5 10 86 3 4 6 8 8 17 32 50 65 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT R 35 R 35 5 12 86 3 4 6 8 14 28 38 50 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT G 36 G 36 7 16 86 5 12 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT H 37 H 37 7 16 86 8 12 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 38 V 38 7 16 86 4 12 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 39 T 39 7 16 86 8 12 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT I 40 I 40 7 16 86 8 12 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 41 V 41 7 16 86 8 12 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT G 42 G 42 10 16 86 3 10 17 24 33 39 44 58 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 43 S 43 10 16 86 6 8 15 21 27 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT Q 44 Q 44 10 16 86 7 8 10 13 24 33 44 47 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT E 45 E 45 10 16 86 7 8 12 22 26 31 41 54 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT A 46 A 46 10 16 86 7 8 12 23 26 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT M 47 M 47 10 16 86 7 8 15 25 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT D 48 D 48 10 16 86 7 8 10 17 26 38 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT K 49 K 49 10 16 86 7 11 17 23 26 37 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT I 50 I 50 10 16 86 7 9 17 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT D 51 D 51 10 16 86 3 8 10 24 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 52 S 52 3 15 86 3 3 6 9 14 30 44 50 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT I 53 I 53 8 15 86 3 6 14 22 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 54 T 54 10 15 86 6 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 55 V 55 10 15 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT P 56 P 56 10 15 86 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 57 V 57 10 15 86 6 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT D 58 D 58 10 15 86 8 12 20 25 34 38 44 52 64 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT I 59 I 59 10 15 86 6 11 20 27 34 39 44 54 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 60 S 60 10 15 86 6 12 15 24 33 38 43 47 61 73 75 78 84 85 85 85 86 86 86 86 LCS_GDT Q 61 Q 61 10 15 86 3 7 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 62 V 62 10 15 86 3 10 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 63 T 63 10 15 86 3 11 20 27 34 39 44 47 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT E 64 E 64 5 15 86 3 4 14 20 23 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT D 65 D 65 7 26 86 3 8 17 23 26 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 66 T 66 7 26 86 3 12 17 23 26 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 67 S 67 8 26 86 4 7 17 23 26 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT K 68 K 68 8 26 86 4 9 17 23 26 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 69 T 69 8 26 86 4 12 17 23 26 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT L 70 L 70 8 26 86 4 12 17 23 26 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT E 71 E 71 8 26 86 4 12 17 23 26 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT L 72 L 72 8 26 86 3 7 17 23 26 28 39 50 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT K 73 K 73 8 26 86 3 7 11 19 24 26 35 42 52 68 75 78 84 85 85 85 86 86 86 86 LCS_GDT A 74 A 74 8 26 86 3 7 11 18 24 25 30 41 50 64 73 78 84 85 85 85 86 86 86 86 LCS_GDT E 75 E 75 8 26 86 3 7 10 15 20 25 28 35 44 51 63 77 84 85 85 85 86 86 86 86 LCS_GDT G 76 G 76 4 26 86 3 5 7 14 15 23 28 35 45 52 66 78 84 85 85 85 86 86 86 86 LCS_GDT V 77 V 77 9 26 86 3 12 17 23 26 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 78 T 78 9 26 86 3 12 17 23 26 28 41 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 79 V 79 9 26 86 5 10 17 23 26 28 41 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT Q 80 Q 80 9 26 86 3 9 17 23 26 27 36 49 64 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT P 81 P 81 9 26 86 3 7 17 23 26 27 36 49 64 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT S 82 S 82 9 26 86 6 11 15 23 26 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 83 T 83 9 26 86 6 11 17 23 26 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 84 V 84 9 26 86 6 12 17 23 26 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT K 85 K 85 9 26 86 6 12 17 23 26 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 86 V 86 9 26 86 5 12 17 23 26 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT N 87 N 87 9 26 86 6 12 17 23 26 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT L 88 L 88 9 26 86 6 12 17 23 26 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT K 89 K 89 9 26 86 3 12 17 23 26 28 38 50 66 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT V 90 V 90 9 26 86 4 11 17 23 26 28 40 55 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT T 91 T 91 3 16 86 3 3 7 13 23 28 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT Q 92 Q 92 3 4 86 3 3 14 18 22 29 42 59 69 74 75 78 84 85 85 85 86 86 86 86 LCS_GDT K 93 K 93 3 4 86 2 3 4 4 16 28 37 40 50 59 69 76 84 85 85 85 86 86 86 86 LCS_AVERAGE LCS_A: 42.89 ( 8.87 19.79 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 20 27 34 39 44 59 69 74 75 78 84 85 85 85 86 86 86 86 GDT PERCENT_AT 9.30 13.95 23.26 31.40 39.53 45.35 51.16 68.60 80.23 86.05 87.21 90.70 97.67 98.84 98.84 98.84 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.31 0.47 1.01 1.44 1.76 2.02 2.27 3.24 3.49 3.62 3.65 3.78 4.11 4.16 4.16 4.16 4.26 4.26 4.26 4.26 GDT RMS_ALL_AT 6.14 7.45 5.91 5.53 5.31 5.05 4.97 4.31 4.29 4.33 4.33 4.33 4.27 4.27 4.27 4.27 4.26 4.26 4.26 4.26 # Checking swapping # possible swapping detected: E 17 E 17 # possible swapping detected: D 21 D 21 # possible swapping detected: Y 31 Y 31 # possible swapping detected: F 33 F 33 # possible swapping detected: D 34 D 34 # possible swapping detected: E 45 E 45 # possible swapping detected: E 75 E 75 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 8 L 8 2.870 0 0.032 1.308 5.523 54.286 46.845 LGA S 9 S 9 0.953 0 0.601 0.833 3.119 79.643 75.000 LGA K 10 K 10 1.584 0 0.162 1.135 5.613 70.833 60.688 LGA S 11 S 11 1.649 0 0.043 0.691 4.785 72.976 64.683 LGA V 12 V 12 1.981 0 0.161 0.307 2.209 68.810 69.388 LGA P 13 P 13 2.429 0 0.112 0.397 3.170 59.167 58.367 LGA V 14 V 14 2.722 0 0.055 0.063 4.280 62.857 55.510 LGA K 15 K 15 3.000 0 0.181 0.706 5.902 53.571 42.963 LGA L 16 L 16 3.235 0 0.040 1.068 3.463 51.786 55.476 LGA E 17 E 17 3.261 0 0.137 1.058 5.136 45.119 41.746 LGA L 18 L 18 3.936 0 0.055 1.375 7.297 45.000 37.857 LGA T 19 T 19 3.246 0 0.092 1.048 4.857 45.000 45.510 LGA G 20 G 20 3.854 0 0.572 0.572 5.889 34.881 34.881 LGA D 21 D 21 6.484 0 0.032 1.070 11.989 30.000 15.893 LGA K 22 K 22 5.451 0 0.068 0.906 13.354 29.048 13.862 LGA A 23 A 23 2.936 0 0.057 0.070 4.397 48.571 46.286 LGA S 24 S 24 3.616 0 0.241 0.599 5.279 37.738 40.714 LGA N 25 N 25 6.755 0 0.682 1.085 8.084 13.214 17.976 LGA V 26 V 26 6.035 0 0.143 1.064 7.738 12.857 19.252 LGA S 27 S 27 9.890 0 0.607 0.877 12.768 2.738 1.825 LGA S 28 S 28 7.199 0 0.439 0.471 8.993 11.905 9.206 LGA I 29 I 29 7.517 0 0.542 0.582 12.513 11.190 5.952 LGA S 30 S 30 3.867 0 0.144 0.182 4.840 40.357 40.317 LGA Y 31 Y 31 3.307 0 0.094 1.417 5.615 48.333 43.333 LGA S 32 S 32 3.777 0 0.567 1.000 7.056 48.452 38.333 LGA F 33 F 33 1.087 0 0.122 1.362 9.546 60.119 35.758 LGA D 34 D 34 6.164 0 0.115 1.091 9.111 20.595 12.024 LGA R 35 R 35 5.056 0 0.579 0.993 16.565 44.881 18.009 LGA G 36 G 36 2.309 0 0.633 0.633 2.886 62.857 62.857 LGA H 37 H 37 2.051 0 0.035 1.021 5.880 61.071 45.571 LGA V 38 V 38 2.709 0 0.077 1.130 4.230 64.881 55.714 LGA T 39 T 39 2.374 0 0.049 0.074 2.958 59.048 58.231 LGA I 40 I 40 2.605 0 0.022 1.217 4.530 59.048 54.048 LGA V 41 V 41 3.228 0 0.026 1.034 5.638 48.452 46.190 LGA G 42 G 42 4.321 0 0.291 0.291 4.321 43.452 43.452 LGA S 43 S 43 3.536 0 0.105 0.652 4.919 43.452 42.540 LGA Q 44 Q 44 5.857 0 0.022 1.366 10.140 25.000 13.492 LGA E 45 E 45 5.033 0 0.021 0.825 9.770 34.762 20.317 LGA A 46 A 46 1.676 0 0.018 0.029 2.727 73.214 74.857 LGA M 47 M 47 2.996 0 0.024 1.377 10.061 59.048 37.738 LGA D 48 D 48 3.835 0 0.100 1.502 9.528 51.905 30.536 LGA K 49 K 49 2.314 0 0.074 0.894 3.389 68.929 61.640 LGA I 50 I 50 1.920 0 0.611 1.287 5.731 71.071 52.917 LGA D 51 D 51 2.726 0 0.054 1.033 4.310 50.595 51.250 LGA S 52 S 52 4.796 0 0.654 0.667 6.094 45.476 36.032 LGA I 53 I 53 3.459 0 0.100 1.259 6.375 43.452 46.786 LGA T 54 T 54 3.122 0 0.119 1.057 4.945 51.786 51.633 LGA V 55 V 55 3.579 0 0.168 0.174 3.745 45.000 44.286 LGA P 56 P 56 3.652 0 0.075 0.112 4.412 41.786 42.449 LGA V 57 V 57 3.972 0 0.076 1.081 5.547 40.238 38.503 LGA D 58 D 58 4.830 0 0.086 0.217 6.200 31.429 28.333 LGA I 59 I 59 4.528 0 0.101 1.474 6.756 27.619 29.643 LGA S 60 S 60 5.907 0 0.613 0.566 8.195 17.381 18.016 LGA Q 61 Q 61 3.953 0 0.125 0.188 4.437 38.690 41.270 LGA V 62 V 62 3.990 0 0.144 1.097 4.507 38.810 43.673 LGA T 63 T 63 5.087 0 0.647 0.979 6.406 31.786 25.510 LGA E 64 E 64 3.447 0 0.577 0.563 6.880 55.357 36.508 LGA D 65 D 65 3.447 0 0.206 0.371 6.404 50.000 38.274 LGA T 66 T 66 2.970 0 0.089 0.210 3.516 55.357 54.150 LGA S 67 S 67 3.528 0 0.071 0.674 4.988 48.333 44.683 LGA K 68 K 68 3.582 0 0.098 0.970 5.934 43.333 41.693 LGA T 69 T 69 3.467 0 0.046 1.060 5.766 46.667 45.034 LGA L 70 L 70 3.599 0 0.113 0.133 3.945 45.000 44.167 LGA E 71 E 71 3.534 0 0.031 0.808 4.009 41.786 47.937 LGA L 72 L 72 4.439 0 0.047 1.383 4.750 34.286 43.155 LGA K 73 K 73 5.831 0 0.081 0.792 11.182 21.548 11.905 LGA A 74 A 74 6.352 0 0.205 0.271 6.756 15.238 15.619 LGA E 75 E 75 6.849 0 0.209 1.047 10.857 12.500 6.667 LGA G 76 G 76 6.723 0 0.662 0.662 6.723 17.262 17.262 LGA V 77 V 77 3.909 0 0.152 0.202 4.833 38.810 43.605 LGA T 78 T 78 3.992 0 0.134 0.151 4.812 41.786 38.980 LGA V 79 V 79 3.974 0 0.116 0.986 4.865 38.690 43.197 LGA Q 80 Q 80 5.409 0 0.071 0.147 8.502 25.119 15.556 LGA P 81 P 81 5.604 0 0.701 0.616 6.424 23.929 21.633 LGA S 82 S 82 3.662 0 0.320 0.875 4.464 45.000 45.714 LGA T 83 T 83 3.785 0 0.034 0.099 5.051 41.786 38.231 LGA V 84 V 84 3.696 0 0.025 0.082 4.057 43.333 42.449 LGA K 85 K 85 3.627 0 0.025 0.743 3.762 43.333 56.455 LGA V 86 V 86 3.589 0 0.107 1.098 5.534 45.000 46.599 LGA N 87 N 87 3.892 0 0.038 1.129 7.981 41.786 28.988 LGA L 88 L 88 3.654 0 0.184 1.044 4.878 45.000 47.202 LGA K 89 K 89 4.989 0 0.157 0.683 6.723 32.857 25.661 LGA V 90 V 90 4.485 0 0.138 1.093 6.345 40.476 36.259 LGA T 91 T 91 3.810 0 0.031 0.058 6.603 56.071 42.925 LGA Q 92 Q 92 3.390 0 0.239 1.189 4.979 43.929 40.317 LGA K 93 K 93 7.490 0 0.562 0.735 15.640 8.214 3.704 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 86 344 344 100.00 644 644 100.00 86 SUMMARY(RMSD_GDC): 4.264 4.242 5.162 42.744 38.485 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 86 86 4.0 59 3.24 53.198 48.303 1.765 LGA_LOCAL RMSD: 3.242 Number of atoms: 59 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.310 Number of assigned atoms: 86 Std_ASGN_ATOMS RMSD: 4.264 Standard rmsd on all 86 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.274782 * X + -0.834545 * Y + 0.477524 * Z + 7.836268 Y_new = -0.784740 * X + -0.481627 * Y + -0.390151 * Z + -3.399157 Z_new = 0.555587 * X + -0.267526 * Y + -0.787244 * Z + -1.423038 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.233982 -0.589069 -2.814010 [DEG: -70.7020 -33.7512 -161.2309 ] ZXZ: 0.885757 2.477123 2.019550 [DEG: 50.7502 141.9287 115.7117 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0572TS470_1-D1 REMARK 2: T0572-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0572TS470_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 86 86 4.0 59 3.24 48.303 4.26 REMARK ---------------------------------------------------------- MOLECULE T0572TS470_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0572 REMARK MODEL 1 REMARK PARENT N/A ATOM 60 N LEU 8 22.229 2.697 0.407 1.00 6.21 N ATOM 61 CA LEU 8 21.760 1.757 1.372 1.00 6.21 C ATOM 62 C LEU 8 20.849 2.479 2.294 1.00 6.21 C ATOM 63 O LEU 8 21.002 3.673 2.549 1.00 6.21 O ATOM 64 CB LEU 8 22.867 1.121 2.234 1.00 6.21 C ATOM 65 CG LEU 8 23.940 0.365 1.425 1.00 6.21 C ATOM 66 CD1 LEU 8 25.056 -0.173 2.331 1.00 6.21 C ATOM 67 CD2 LEU 8 23.331 -0.834 0.681 1.00 6.21 C ATOM 68 N SER 9 19.842 1.745 2.790 1.00 5.67 N ATOM 69 CA SER 9 18.899 2.266 3.722 1.00 5.67 C ATOM 70 C SER 9 18.162 3.390 3.083 1.00 5.67 C ATOM 71 O SER 9 17.502 4.155 3.782 1.00 5.67 O ATOM 72 CB SER 9 19.553 2.791 5.011 1.00 5.67 C ATOM 73 OG SER 9 20.230 1.734 5.677 1.00 5.67 O ATOM 74 N LYS 10 18.211 3.502 1.739 1.00 4.75 N ATOM 75 CA LYS 10 17.491 4.584 1.136 1.00 4.75 C ATOM 76 C LYS 10 16.062 4.330 1.465 1.00 4.75 C ATOM 77 O LYS 10 15.527 3.265 1.163 1.00 4.75 O ATOM 78 CB LYS 10 17.627 4.636 -0.395 1.00 4.75 C ATOM 79 CG LYS 10 16.931 5.831 -1.051 1.00 4.75 C ATOM 80 CD LYS 10 17.129 5.940 -2.564 1.00 4.75 C ATOM 81 CE LYS 10 16.354 7.105 -3.186 1.00 4.75 C ATOM 82 NZ LYS 10 16.640 7.199 -4.633 1.00 4.75 N ATOM 83 N SER 11 15.406 5.312 2.108 1.00 4.27 N ATOM 84 CA SER 11 14.056 5.085 2.518 1.00 4.27 C ATOM 85 C SER 11 13.180 5.707 1.496 1.00 4.27 C ATOM 86 O SER 11 13.364 6.861 1.114 1.00 4.27 O ATOM 87 CB SER 11 13.712 5.719 3.877 1.00 4.27 C ATOM 88 OG SER 11 14.475 5.112 4.909 1.00 4.27 O ATOM 89 N VAL 12 12.196 4.931 1.011 1.00 3.63 N ATOM 90 CA VAL 12 11.324 5.453 0.012 1.00 3.63 C ATOM 91 C VAL 12 9.955 5.475 0.585 1.00 3.63 C ATOM 92 O VAL 12 9.480 4.481 1.132 1.00 3.63 O ATOM 93 CB VAL 12 11.256 4.584 -1.210 1.00 3.63 C ATOM 94 CG1 VAL 12 12.659 4.484 -1.827 1.00 3.63 C ATOM 95 CG2 VAL 12 10.758 3.191 -0.792 1.00 3.63 C ATOM 96 N PRO 13 9.321 6.606 0.511 1.00 3.60 N ATOM 97 CA PRO 13 7.947 6.647 0.894 1.00 3.60 C ATOM 98 C PRO 13 7.260 6.039 -0.273 1.00 3.60 C ATOM 99 O PRO 13 7.626 6.361 -1.401 1.00 3.60 O ATOM 100 CB PRO 13 7.611 8.117 1.155 1.00 3.60 C ATOM 101 CG PRO 13 8.579 8.905 0.246 1.00 3.60 C ATOM 102 CD PRO 13 9.850 8.041 0.231 1.00 3.60 C ATOM 103 N VAL 14 6.269 5.169 -0.057 1.00 3.47 N ATOM 104 CA VAL 14 5.678 4.602 -1.222 1.00 3.47 C ATOM 105 C VAL 14 4.219 4.810 -1.098 1.00 3.47 C ATOM 106 O VAL 14 3.657 4.728 -0.006 1.00 3.47 O ATOM 107 CB VAL 14 5.900 3.123 -1.347 1.00 3.47 C ATOM 108 CG1 VAL 14 7.413 2.864 -1.452 1.00 3.47 C ATOM 109 CG2 VAL 14 5.324 2.432 -0.099 1.00 3.47 C ATOM 110 N LYS 15 3.572 5.110 -2.233 1.00 3.49 N ATOM 111 CA LYS 15 2.160 5.270 -2.194 1.00 3.49 C ATOM 112 C LYS 15 1.610 3.893 -2.140 1.00 3.49 C ATOM 113 O LYS 15 2.229 2.943 -2.617 1.00 3.49 O ATOM 114 CB LYS 15 1.571 5.976 -3.427 1.00 3.49 C ATOM 115 CG LYS 15 1.971 7.447 -3.550 1.00 3.49 C ATOM 116 CD LYS 15 1.362 8.141 -4.770 1.00 3.49 C ATOM 117 CE LYS 15 1.745 9.618 -4.893 1.00 3.49 C ATOM 118 NZ LYS 15 1.126 10.203 -6.103 1.00 3.49 N ATOM 119 N LEU 16 0.436 3.739 -1.516 1.00 3.50 N ATOM 120 CA LEU 16 -0.100 2.422 -1.442 1.00 3.50 C ATOM 121 C LEU 16 -1.157 2.326 -2.494 1.00 3.50 C ATOM 122 O LEU 16 -2.059 3.160 -2.558 1.00 3.50 O ATOM 123 CB LEU 16 -0.747 2.112 -0.080 1.00 3.50 C ATOM 124 CG LEU 16 -0.978 0.612 0.173 1.00 3.50 C ATOM 125 CD1 LEU 16 -1.612 0.384 1.555 1.00 3.50 C ATOM 126 CD2 LEU 16 -1.918 0.004 -0.880 1.00 3.50 C ATOM 127 N GLU 17 -1.048 1.302 -3.364 1.00 3.65 N ATOM 128 CA GLU 17 -2.008 1.105 -4.410 1.00 3.65 C ATOM 129 C GLU 17 -2.883 -0.018 -3.973 1.00 3.65 C ATOM 130 O GLU 17 -2.429 -0.966 -3.336 1.00 3.65 O ATOM 131 CB GLU 17 -1.385 0.706 -5.758 1.00 3.65 C ATOM 132 CG GLU 17 -0.499 1.796 -6.366 1.00 3.65 C ATOM 133 CD GLU 17 0.046 1.273 -7.687 1.00 3.65 C ATOM 134 OE1 GLU 17 -0.211 0.080 -8.002 1.00 3.65 O ATOM 135 OE2 GLU 17 0.726 2.058 -8.400 1.00 3.65 O ATOM 136 N LEU 18 -4.183 0.071 -4.298 1.00 3.78 N ATOM 137 CA LEU 18 -5.081 -0.939 -3.838 1.00 3.78 C ATOM 138 C LEU 18 -5.548 -1.657 -5.068 1.00 3.78 C ATOM 139 O LEU 18 -5.968 -1.025 -6.036 1.00 3.78 O ATOM 140 CB LEU 18 -6.256 -0.279 -3.095 1.00 3.78 C ATOM 141 CG LEU 18 -7.342 -1.228 -2.589 1.00 3.78 C ATOM 142 CD1 LEU 18 -6.800 -2.151 -1.485 1.00 3.78 C ATOM 143 CD2 LEU 18 -8.534 -0.456 -2.006 1.00 3.78 C ATOM 144 N THR 19 -5.466 -3.005 -5.080 1.00 4.00 N ATOM 145 CA THR 19 -5.839 -3.700 -6.280 1.00 4.00 C ATOM 146 C THR 19 -6.859 -4.747 -5.962 1.00 4.00 C ATOM 147 O THR 19 -6.956 -5.227 -4.835 1.00 4.00 O ATOM 148 CB THR 19 -4.687 -4.399 -6.944 1.00 4.00 C ATOM 149 OG1 THR 19 -4.158 -5.398 -6.085 1.00 4.00 O ATOM 150 CG2 THR 19 -3.596 -3.360 -7.257 1.00 4.00 C ATOM 151 N GLY 20 -7.669 -5.123 -6.974 1.00 4.14 N ATOM 152 CA GLY 20 -8.645 -6.158 -6.792 1.00 4.14 C ATOM 153 C GLY 20 -9.771 -5.635 -5.962 1.00 4.14 C ATOM 154 O GLY 20 -10.403 -6.383 -5.218 1.00 4.14 O ATOM 155 N ASP 21 -10.063 -4.329 -6.069 1.00 4.17 N ATOM 156 CA ASP 21 -11.131 -3.806 -5.271 1.00 4.17 C ATOM 157 C ASP 21 -12.386 -4.519 -5.654 1.00 4.17 C ATOM 158 O ASP 21 -12.647 -4.768 -6.830 1.00 4.17 O ATOM 159 CB ASP 21 -11.361 -2.294 -5.454 1.00 4.17 C ATOM 160 CG ASP 21 -10.174 -1.549 -4.859 1.00 4.17 C ATOM 161 OD1 ASP 21 -9.810 -1.856 -3.694 1.00 4.17 O ATOM 162 OD2 ASP 21 -9.615 -0.663 -5.560 1.00 4.17 O ATOM 163 N LYS 22 -13.205 -4.869 -4.643 1.00 4.14 N ATOM 164 CA LYS 22 -14.427 -5.571 -4.897 1.00 4.14 C ATOM 165 C LYS 22 -15.307 -4.660 -5.683 1.00 4.14 C ATOM 166 O LYS 22 -15.246 -3.440 -5.543 1.00 4.14 O ATOM 167 CB LYS 22 -15.185 -5.973 -3.621 1.00 4.14 C ATOM 168 CG LYS 22 -14.437 -6.994 -2.762 1.00 4.14 C ATOM 169 CD LYS 22 -14.297 -8.365 -3.429 1.00 4.14 C ATOM 170 CE LYS 22 -15.626 -9.110 -3.578 1.00 4.14 C ATOM 171 NZ LYS 22 -15.400 -10.424 -4.222 1.00 4.14 N ATOM 172 N ALA 23 -16.144 -5.244 -6.557 1.00 4.34 N ATOM 173 CA ALA 23 -17.001 -4.449 -7.383 1.00 4.34 C ATOM 174 C ALA 23 -18.056 -3.827 -6.528 1.00 4.34 C ATOM 175 O ALA 23 -18.401 -4.337 -5.463 1.00 4.34 O ATOM 176 CB ALA 23 -17.707 -5.250 -8.490 1.00 4.34 C ATOM 177 N SER 24 -18.573 -2.672 -6.989 1.00 4.00 N ATOM 178 CA SER 24 -19.619 -1.962 -6.315 1.00 4.00 C ATOM 179 C SER 24 -19.144 -1.568 -4.957 1.00 4.00 C ATOM 180 O SER 24 -19.946 -1.360 -4.048 1.00 4.00 O ATOM 181 CB SER 24 -20.905 -2.790 -6.157 1.00 4.00 C ATOM 182 OG SER 24 -21.405 -3.162 -7.433 1.00 4.00 O ATOM 183 N ASN 25 -17.816 -1.440 -4.788 1.00 4.12 N ATOM 184 CA ASN 25 -17.302 -1.033 -3.516 1.00 4.12 C ATOM 185 C ASN 25 -16.240 -0.017 -3.780 1.00 4.12 C ATOM 186 O ASN 25 -15.638 0.004 -4.852 1.00 4.12 O ATOM 187 CB ASN 25 -16.652 -2.175 -2.716 1.00 4.12 C ATOM 188 CG ASN 25 -17.743 -3.173 -2.359 1.00 4.12 C ATOM 189 OD1 ASN 25 -18.543 -2.943 -1.452 1.00 4.12 O ATOM 190 ND2 ASN 25 -17.780 -4.318 -3.092 1.00 4.12 N ATOM 191 N VAL 26 -16.006 0.884 -2.808 1.00 4.31 N ATOM 192 CA VAL 26 -14.977 1.867 -2.973 1.00 4.31 C ATOM 193 C VAL 26 -14.247 1.951 -1.674 1.00 4.31 C ATOM 194 O VAL 26 -14.809 1.653 -0.621 1.00 4.31 O ATOM 195 CB VAL 26 -15.497 3.241 -3.270 1.00 4.31 C ATOM 196 CG1 VAL 26 -16.337 3.718 -2.074 1.00 4.31 C ATOM 197 CG2 VAL 26 -14.301 4.183 -3.491 1.00 4.31 C ATOM 198 N SER 27 -12.957 2.341 -1.714 1.00 4.57 N ATOM 199 CA SER 27 -12.244 2.457 -0.475 1.00 4.57 C ATOM 200 C SER 27 -12.894 3.571 0.267 1.00 4.57 C ATOM 201 O SER 27 -12.803 4.734 -0.125 1.00 4.57 O ATOM 202 CB SER 27 -10.757 2.809 -0.648 1.00 4.57 C ATOM 203 OG SER 27 -10.108 1.813 -1.425 1.00 4.57 O ATOM 204 N SER 28 -13.589 3.227 1.364 1.00 4.12 N ATOM 205 CA SER 28 -14.304 4.217 2.103 1.00 4.12 C ATOM 206 C SER 28 -13.382 5.197 2.735 1.00 4.12 C ATOM 207 O SER 28 -13.199 6.304 2.231 1.00 4.12 O ATOM 208 CB SER 28 -15.214 3.603 3.186 1.00 4.12 C ATOM 209 OG SER 28 -15.918 4.613 3.897 1.00 4.12 O ATOM 210 N ILE 29 -12.761 4.807 3.862 1.00 3.97 N ATOM 211 CA ILE 29 -11.935 5.761 4.524 1.00 3.97 C ATOM 212 C ILE 29 -10.762 6.027 3.662 1.00 3.97 C ATOM 213 O ILE 29 -10.532 7.170 3.272 1.00 3.97 O ATOM 214 CB ILE 29 -11.414 5.270 5.842 1.00 3.97 C ATOM 215 CG1 ILE 29 -12.564 5.087 6.844 1.00 3.97 C ATOM 216 CG2 ILE 29 -10.420 6.315 6.379 1.00 3.97 C ATOM 217 CD1 ILE 29 -12.155 4.334 8.109 1.00 3.97 C ATOM 218 N SER 30 -10.044 4.941 3.307 1.00 4.10 N ATOM 219 CA SER 30 -8.859 4.976 2.501 1.00 4.10 C ATOM 220 C SER 30 -7.919 3.988 3.091 1.00 4.10 C ATOM 221 O SER 30 -8.312 3.077 3.819 1.00 4.10 O ATOM 222 CB SER 30 -8.080 6.305 2.484 1.00 4.10 C ATOM 223 OG SER 30 -6.926 6.182 1.666 1.00 4.10 O ATOM 224 N TYR 31 -6.628 4.153 2.757 1.00 4.19 N ATOM 225 CA TYR 31 -5.602 3.335 3.316 1.00 4.19 C ATOM 226 C TYR 31 -5.305 3.999 4.613 1.00 4.19 C ATOM 227 O TYR 31 -5.200 5.224 4.664 1.00 4.19 O ATOM 228 CB TYR 31 -4.285 3.383 2.526 1.00 4.19 C ATOM 229 CG TYR 31 -4.465 2.633 1.251 1.00 4.19 C ATOM 230 CD1 TYR 31 -4.774 3.270 0.071 1.00 4.19 C ATOM 231 CD2 TYR 31 -4.322 1.266 1.252 1.00 4.19 C ATOM 232 CE1 TYR 31 -4.936 2.548 -1.088 1.00 4.19 C ATOM 233 CE2 TYR 31 -4.482 0.537 0.100 1.00 4.19 C ATOM 234 CZ TYR 31 -4.790 1.179 -1.074 1.00 4.19 C ATOM 235 OH TYR 31 -4.955 0.427 -2.255 1.00 4.19 H ATOM 236 N SER 32 -5.186 3.221 5.703 1.00 4.58 N ATOM 237 CA SER 32 -4.901 3.840 6.961 1.00 4.58 C ATOM 238 C SER 32 -3.604 4.532 6.777 1.00 4.58 C ATOM 239 O SER 32 -3.411 5.658 7.236 1.00 4.58 O ATOM 240 CB SER 32 -4.711 2.845 8.114 1.00 4.58 C ATOM 241 OG SER 32 -4.417 3.542 9.317 1.00 4.58 O ATOM 242 N PHE 33 -2.678 3.872 6.064 1.00 3.99 N ATOM 243 CA PHE 33 -1.429 4.521 5.842 1.00 3.99 C ATOM 244 C PHE 33 -1.428 5.020 4.440 1.00 3.99 C ATOM 245 O PHE 33 -1.507 4.249 3.486 1.00 3.99 O ATOM 246 CB PHE 33 -0.209 3.606 6.028 1.00 3.99 C ATOM 247 CG PHE 33 -0.154 3.265 7.476 1.00 3.99 C ATOM 248 CD1 PHE 33 -0.780 2.140 7.958 1.00 3.99 C ATOM 249 CD2 PHE 33 0.520 4.081 8.356 1.00 3.99 C ATOM 250 CE1 PHE 33 -0.730 1.829 9.297 1.00 3.99 C ATOM 251 CE2 PHE 33 0.573 3.776 9.696 1.00 3.99 C ATOM 252 CZ PHE 33 -0.053 2.649 10.168 1.00 3.99 C ATOM 253 N ASP 34 -1.350 6.350 4.281 1.00 3.57 N ATOM 254 CA ASP 34 -1.340 6.888 2.959 1.00 3.57 C ATOM 255 C ASP 34 -0.103 6.379 2.305 1.00 3.57 C ATOM 256 O ASP 34 -0.143 5.862 1.190 1.00 3.57 O ATOM 257 CB ASP 34 -1.275 8.424 2.941 1.00 3.57 C ATOM 258 CG ASP 34 -2.630 8.953 3.386 1.00 3.57 C ATOM 259 OD1 ASP 34 -3.592 8.142 3.444 1.00 3.57 O ATOM 260 OD2 ASP 34 -2.720 10.177 3.673 1.00 3.57 O ATOM 261 N ARG 35 1.034 6.481 3.015 1.00 3.46 N ATOM 262 CA ARG 35 2.263 6.025 2.446 1.00 3.46 C ATOM 263 C ARG 35 2.929 5.151 3.449 1.00 3.46 C ATOM 264 O ARG 35 2.600 5.172 4.633 1.00 3.46 O ATOM 265 CB ARG 35 3.248 7.151 2.089 1.00 3.46 C ATOM 266 CG ARG 35 2.728 8.088 1.000 1.00 3.46 C ATOM 267 CD ARG 35 3.669 9.253 0.689 1.00 3.46 C ATOM 268 NE ARG 35 3.046 10.047 -0.406 1.00 3.46 N ATOM 269 CZ ARG 35 3.676 11.162 -0.880 1.00 3.46 C ATOM 270 NH1 ARG 35 3.110 11.890 -1.887 1.00 3.46 H ATOM 271 NH2 ARG 35 4.874 11.545 -0.352 1.00 3.46 H ATOM 272 N GLY 36 3.883 4.330 2.975 1.00 3.10 N ATOM 273 CA GLY 36 4.588 3.465 3.869 1.00 3.10 C ATOM 274 C GLY 36 6.032 3.806 3.737 1.00 3.10 C ATOM 275 O GLY 36 6.465 4.316 2.704 1.00 3.10 O ATOM 276 N HIS 37 6.819 3.525 4.794 1.00 2.86 N ATOM 277 CA HIS 37 8.218 3.830 4.758 1.00 2.86 C ATOM 278 C HIS 37 8.934 2.560 4.456 1.00 2.86 C ATOM 279 O HIS 37 8.649 1.516 5.041 1.00 2.86 O ATOM 280 CB HIS 37 8.770 4.353 6.096 1.00 2.86 C ATOM 281 CG HIS 37 8.155 5.651 6.527 1.00 2.86 C ATOM 282 ND1 HIS 37 8.526 6.883 6.035 1.00 2.86 N ATOM 283 CD2 HIS 37 7.166 5.896 7.431 1.00 2.86 C ATOM 284 CE1 HIS 37 7.752 7.804 6.662 1.00 2.86 C ATOM 285 NE2 HIS 37 6.911 7.252 7.519 1.00 2.86 N ATOM 286 N VAL 38 9.885 2.617 3.509 1.00 2.77 N ATOM 287 CA VAL 38 10.592 1.426 3.160 1.00 2.77 C ATOM 288 C VAL 38 12.054 1.682 3.328 1.00 2.77 C ATOM 289 O VAL 38 12.543 2.766 3.015 1.00 2.77 O ATOM 290 CB VAL 38 10.399 1.033 1.725 1.00 2.77 C ATOM 291 CG1 VAL 38 11.242 -0.216 1.448 1.00 2.77 C ATOM 292 CG2 VAL 38 8.913 0.734 1.484 1.00 2.77 C ATOM 293 N THR 39 12.786 0.677 3.848 1.00 2.99 N ATOM 294 CA THR 39 14.210 0.790 3.960 1.00 2.99 C ATOM 295 C THR 39 14.758 -0.187 2.971 1.00 2.99 C ATOM 296 O THR 39 14.348 -1.347 2.944 1.00 2.99 O ATOM 297 CB THR 39 14.752 0.455 5.323 1.00 2.99 C ATOM 298 OG1 THR 39 14.208 1.338 6.293 1.00 2.99 O ATOM 299 CG2 THR 39 16.282 0.592 5.322 1.00 2.99 C ATOM 300 N ILE 40 15.683 0.263 2.100 1.00 3.21 N ATOM 301 CA ILE 40 16.140 -0.637 1.080 1.00 3.21 C ATOM 302 C ILE 40 17.616 -0.505 0.940 1.00 3.21 C ATOM 303 O ILE 40 18.175 0.566 1.153 1.00 3.21 O ATOM 304 CB ILE 40 15.586 -0.302 -0.276 1.00 3.21 C ATOM 305 CG1 ILE 40 15.951 -1.407 -1.281 1.00 3.21 C ATOM 306 CG2 ILE 40 16.190 1.037 -0.734 1.00 3.21 C ATOM 307 CD1 ILE 40 15.182 -1.309 -2.597 1.00 3.21 C ATOM 308 N VAL 41 18.325 -1.666 1.014 1.00 3.66 N ATOM 309 CA VAL 41 19.699 -1.680 0.662 1.00 3.66 C ATOM 310 C VAL 41 19.824 -1.955 -0.827 1.00 3.66 C ATOM 311 O VAL 41 19.135 -2.813 -1.394 1.00 3.66 O ATOM 312 CB VAL 41 20.495 -2.633 1.539 1.00 3.66 C ATOM 313 CG1 VAL 41 20.439 -2.045 2.963 1.00 3.66 C ATOM 314 CG2 VAL 41 19.967 -4.085 1.532 1.00 3.66 C ATOM 315 N GLY 42 20.661 -1.158 -1.505 1.00 4.43 N ATOM 316 CA GLY 42 20.655 -1.180 -2.929 1.00 4.43 C ATOM 317 C GLY 42 21.763 -2.057 -3.411 1.00 4.43 C ATOM 318 O GLY 42 22.941 -1.794 -3.182 1.00 4.43 O ATOM 319 N SER 43 21.379 -3.112 -4.154 1.00 3.93 N ATOM 320 CA SER 43 22.179 -3.543 -5.259 1.00 3.93 C ATOM 321 C SER 43 21.870 -2.602 -6.394 1.00 3.93 C ATOM 322 O SER 43 20.957 -1.773 -6.271 1.00 3.93 O ATOM 323 CB SER 43 21.734 -4.946 -5.680 1.00 3.93 C ATOM 324 OG SER 43 20.313 -4.944 -5.832 1.00 3.93 O ATOM 325 N GLN 44 22.568 -2.709 -7.537 1.00 4.77 N ATOM 326 CA GLN 44 22.303 -1.842 -8.661 1.00 4.77 C ATOM 327 C GLN 44 20.923 -2.119 -9.221 1.00 4.77 C ATOM 328 O GLN 44 20.219 -1.200 -9.650 1.00 4.77 O ATOM 329 CB GLN 44 23.359 -1.994 -9.765 1.00 4.77 C ATOM 330 CG GLN 44 24.658 -1.221 -9.454 1.00 4.77 C ATOM 331 CD GLN 44 25.685 -2.124 -8.764 1.00 4.77 C ATOM 332 OE1 GLN 44 25.357 -3.094 -8.080 1.00 4.77 O ATOM 333 NE2 GLN 44 26.990 -1.821 -8.964 1.00 4.77 N ATOM 334 N GLU 45 20.494 -3.391 -9.159 1.00 4.38 N ATOM 335 CA GLU 45 19.177 -3.780 -9.593 1.00 4.38 C ATOM 336 C GLU 45 18.133 -3.134 -8.728 1.00 4.38 C ATOM 337 O GLU 45 17.138 -2.617 -9.241 1.00 4.38 O ATOM 338 CB GLU 45 18.944 -5.287 -9.488 1.00 4.38 C ATOM 339 CG GLU 45 19.976 -6.137 -10.217 1.00 4.38 C ATOM 340 CD GLU 45 19.223 -7.385 -10.616 1.00 4.38 C ATOM 341 OE1 GLU 45 19.161 -8.335 -9.793 1.00 4.38 O ATOM 342 OE2 GLU 45 18.647 -7.367 -11.741 1.00 4.38 O ATOM 343 N ALA 46 18.347 -3.140 -7.407 1.00 4.03 N ATOM 344 CA ALA 46 17.383 -2.602 -6.481 1.00 4.03 C ATOM 345 C ALA 46 17.278 -1.113 -6.663 1.00 4.03 C ATOM 346 O ALA 46 16.185 -0.539 -6.622 1.00 4.03 O ATOM 347 CB ALA 46 17.774 -2.872 -5.027 1.00 4.03 C ATOM 348 N MET 47 18.411 -0.467 -6.948 1.00 3.63 N ATOM 349 CA MET 47 18.460 0.954 -7.120 1.00 3.63 C ATOM 350 C MET 47 17.721 1.346 -8.370 1.00 3.63 C ATOM 351 O MET 47 17.048 2.377 -8.393 1.00 3.63 O ATOM 352 CB MET 47 19.895 1.485 -7.226 1.00 3.63 C ATOM 353 CG MET 47 20.021 2.944 -6.792 1.00 3.63 C ATOM 354 SD MET 47 21.062 3.977 -7.866 1.00 3.63 S ATOM 355 CE MET 47 19.693 5.032 -8.422 1.00 3.63 C ATOM 356 N ASP 48 17.789 0.521 -9.433 1.00 4.08 N ATOM 357 CA ASP 48 17.019 0.803 -10.629 1.00 4.08 C ATOM 358 C ASP 48 15.539 0.682 -10.321 1.00 4.08 C ATOM 359 O ASP 48 14.725 1.510 -10.748 1.00 4.08 O ATOM 360 CB ASP 48 17.372 -0.142 -11.799 1.00 4.08 C ATOM 361 CG ASP 48 16.218 -0.108 -12.799 1.00 4.08 C ATOM 362 OD1 ASP 48 15.386 -1.058 -12.750 1.00 4.08 O ATOM 363 OD2 ASP 48 16.141 0.879 -13.576 1.00 4.08 O ATOM 364 N LYS 49 15.194 -0.353 -9.545 1.00 4.87 N ATOM 365 CA LYS 49 13.831 -0.729 -9.315 1.00 4.87 C ATOM 366 C LYS 49 13.120 0.277 -8.457 1.00 4.87 C ATOM 367 O LYS 49 11.892 0.312 -8.497 1.00 4.87 O ATOM 368 CB LYS 49 13.772 -2.075 -8.610 1.00 4.87 C ATOM 369 CG LYS 49 13.799 -3.299 -9.514 1.00 4.87 C ATOM 370 CD LYS 49 13.597 -4.571 -8.694 1.00 4.87 C ATOM 371 CE LYS 49 12.834 -5.679 -9.415 1.00 4.87 C ATOM 372 NZ LYS 49 13.793 -6.711 -9.857 1.00 4.87 N ATOM 373 N ILE 50 13.862 1.078 -7.672 1.00 4.21 N ATOM 374 CA ILE 50 13.392 2.231 -6.926 1.00 4.21 C ATOM 375 C ILE 50 12.397 3.085 -7.676 1.00 4.21 C ATOM 376 O ILE 50 11.387 3.468 -7.084 1.00 4.21 O ATOM 377 CB ILE 50 14.584 2.992 -6.355 1.00 4.21 C ATOM 378 CG1 ILE 50 15.004 2.242 -5.089 1.00 4.21 C ATOM 379 CG2 ILE 50 14.352 4.487 -6.066 1.00 4.21 C ATOM 380 CD1 ILE 50 13.787 1.779 -4.317 1.00 4.21 C ATOM 381 N ASP 51 12.580 3.279 -8.991 1.00 3.82 N ATOM 382 CA ASP 51 11.688 4.078 -9.805 1.00 3.82 C ATOM 383 C ASP 51 10.248 3.598 -9.794 1.00 3.82 C ATOM 384 O ASP 51 9.325 4.406 -9.852 1.00 3.82 O ATOM 385 CB ASP 51 12.131 4.070 -11.269 1.00 3.82 C ATOM 386 CG ASP 51 11.268 5.047 -12.049 1.00 3.82 C ATOM 387 OD1 ASP 51 11.494 6.276 -11.877 1.00 3.82 O ATOM 388 OD2 ASP 51 10.432 4.584 -12.869 1.00 3.82 O ATOM 389 N SER 52 10.057 2.282 -9.704 1.00 3.40 N ATOM 390 CA SER 52 8.772 1.666 -9.821 1.00 3.40 C ATOM 391 C SER 52 8.229 1.278 -8.474 1.00 3.40 C ATOM 392 O SER 52 7.239 0.535 -8.448 1.00 3.40 O ATOM 393 CB SER 52 8.851 0.351 -10.619 1.00 3.40 C ATOM 394 OG SER 52 10.187 -0.140 -10.665 1.00 3.40 O ATOM 395 N ILE 53 8.829 1.698 -7.335 1.00 2.74 N ATOM 396 CA ILE 53 8.294 1.145 -6.112 1.00 2.74 C ATOM 397 C ILE 53 6.981 1.833 -5.722 1.00 2.74 C ATOM 398 O ILE 53 6.889 2.963 -5.226 1.00 2.74 O ATOM 399 CB ILE 53 9.278 0.858 -4.962 1.00 2.74 C ATOM 400 CG1 ILE 53 8.632 -0.014 -3.863 1.00 2.74 C ATOM 401 CG2 ILE 53 9.941 2.121 -4.413 1.00 2.74 C ATOM 402 CD1 ILE 53 9.566 -0.353 -2.691 1.00 2.74 C ATOM 403 N THR 54 5.898 1.124 -6.026 1.00 2.61 N ATOM 404 CA THR 54 4.675 1.270 -5.297 1.00 2.61 C ATOM 405 C THR 54 4.470 0.054 -4.458 1.00 2.61 C ATOM 406 O THR 54 5.026 -1.010 -4.729 1.00 2.61 O ATOM 407 CB THR 54 3.471 1.396 -6.181 1.00 2.61 C ATOM 408 OG1 THR 54 3.304 0.218 -6.954 1.00 2.61 O ATOM 409 CG2 THR 54 3.672 2.601 -7.117 1.00 2.61 C ATOM 410 N VAL 55 3.671 0.205 -3.383 1.00 2.36 N ATOM 411 CA VAL 55 3.355 -0.909 -2.542 1.00 2.36 C ATOM 412 C VAL 55 1.902 -1.218 -2.758 1.00 2.36 C ATOM 413 O VAL 55 1.029 -0.370 -2.582 1.00 2.36 O ATOM 414 CB VAL 55 3.582 -0.627 -1.082 1.00 2.36 C ATOM 415 CG1 VAL 55 3.175 -1.875 -0.280 1.00 2.36 C ATOM 416 CG2 VAL 55 5.071 -0.312 -0.859 1.00 2.36 C ATOM 417 N PRO 56 1.658 -2.417 -3.216 1.00 2.35 N ATOM 418 CA PRO 56 0.298 -2.843 -3.468 1.00 2.35 C ATOM 419 C PRO 56 -0.378 -3.479 -2.290 1.00 2.35 C ATOM 420 O PRO 56 0.302 -3.834 -1.328 1.00 2.35 O ATOM 421 CB PRO 56 0.362 -3.812 -4.648 1.00 2.35 C ATOM 422 CG PRO 56 1.688 -4.560 -4.456 1.00 2.35 C ATOM 423 CD PRO 56 2.645 -3.475 -3.941 1.00 2.35 C ATOM 424 N VAL 57 -1.720 -3.632 -2.359 1.00 2.24 N ATOM 425 CA VAL 57 -2.487 -4.317 -1.354 1.00 2.24 C ATOM 426 C VAL 57 -3.527 -5.110 -2.089 1.00 2.24 C ATOM 427 O VAL 57 -4.016 -4.676 -3.131 1.00 2.24 O ATOM 428 CB VAL 57 -3.203 -3.386 -0.419 1.00 2.24 C ATOM 429 CG1 VAL 57 -4.065 -4.210 0.548 1.00 2.24 C ATOM 430 CG2 VAL 57 -2.153 -2.584 0.359 1.00 2.24 C ATOM 431 N ASP 58 -3.895 -6.300 -1.567 1.00 2.56 N ATOM 432 CA ASP 58 -4.838 -7.138 -2.259 1.00 2.56 C ATOM 433 C ASP 58 -6.191 -7.004 -1.620 1.00 2.56 C ATOM 434 O ASP 58 -6.434 -7.503 -0.523 1.00 2.56 O ATOM 435 CB ASP 58 -4.459 -8.630 -2.225 1.00 2.56 C ATOM 436 CG ASP 58 -3.177 -8.812 -3.025 1.00 2.56 C ATOM 437 OD1 ASP 58 -3.116 -8.294 -4.172 1.00 2.56 O ATOM 438 OD2 ASP 58 -2.242 -9.472 -2.500 1.00 2.56 O ATOM 439 N ILE 59 -7.097 -6.308 -2.330 1.00 2.27 N ATOM 440 CA ILE 59 -8.456 -5.989 -1.982 1.00 2.27 C ATOM 441 C ILE 59 -9.327 -7.199 -1.982 1.00 2.27 C ATOM 442 O ILE 59 -10.320 -7.239 -1.256 1.00 2.27 O ATOM 443 CB ILE 59 -9.086 -5.042 -2.955 1.00 2.27 C ATOM 444 CG1 ILE 59 -8.314 -3.728 -2.939 1.00 2.27 C ATOM 445 CG2 ILE 59 -10.547 -4.800 -2.537 1.00 2.27 C ATOM 446 CD1 ILE 59 -8.251 -3.041 -1.577 1.00 2.27 C ATOM 447 N SER 60 -9.017 -8.176 -2.853 1.00 2.92 N ATOM 448 CA SER 60 -9.859 -9.318 -3.060 1.00 2.92 C ATOM 449 C SER 60 -10.269 -9.913 -1.754 1.00 2.92 C ATOM 450 O SER 60 -9.489 -10.013 -0.809 1.00 2.92 O ATOM 451 CB SER 60 -9.185 -10.426 -3.885 1.00 2.92 C ATOM 452 OG SER 60 -8.921 -9.960 -5.200 1.00 2.92 O ATOM 453 N GLN 61 -11.553 -10.306 -1.691 1.00 3.00 N ATOM 454 CA GLN 61 -12.140 -10.903 -0.532 1.00 3.00 C ATOM 455 C GLN 61 -12.185 -9.916 0.591 1.00 3.00 C ATOM 456 O GLN 61 -12.324 -10.307 1.749 1.00 3.00 O ATOM 457 CB GLN 61 -11.356 -12.129 -0.035 1.00 3.00 C ATOM 458 CG GLN 61 -11.300 -13.275 -1.047 1.00 3.00 C ATOM 459 CD GLN 61 -10.529 -14.427 -0.414 1.00 3.00 C ATOM 460 OE1 GLN 61 -9.954 -14.289 0.665 1.00 3.00 O ATOM 461 NE2 GLN 61 -10.517 -15.598 -1.104 1.00 3.00 N ATOM 462 N VAL 62 -12.091 -8.606 0.297 1.00 2.59 N ATOM 463 CA VAL 62 -12.213 -7.673 1.380 1.00 2.59 C ATOM 464 C VAL 62 -13.661 -7.404 1.593 1.00 2.59 C ATOM 465 O VAL 62 -14.452 -7.357 0.651 1.00 2.59 O ATOM 466 CB VAL 62 -11.485 -6.368 1.196 1.00 2.59 C ATOM 467 CG1 VAL 62 -12.079 -5.635 -0.018 1.00 2.59 C ATOM 468 CG2 VAL 62 -11.677 -5.536 2.479 1.00 2.59 C ATOM 469 N THR 63 -14.031 -7.217 2.870 1.00 2.94 N ATOM 470 CA THR 63 -15.389 -6.993 3.246 1.00 2.94 C ATOM 471 C THR 63 -15.870 -5.804 2.501 1.00 2.94 C ATOM 472 O THR 63 -15.136 -4.840 2.295 1.00 2.94 O ATOM 473 CB THR 63 -15.521 -6.679 4.698 1.00 2.94 C ATOM 474 OG1 THR 63 -15.003 -7.736 5.492 1.00 2.94 O ATOM 475 CG2 THR 63 -17.021 -6.494 4.979 1.00 2.94 C ATOM 476 N GLU 64 -17.145 -5.855 2.076 1.00 4.23 N ATOM 477 CA GLU 64 -17.675 -4.763 1.329 1.00 4.23 C ATOM 478 C GLU 64 -17.605 -3.566 2.209 1.00 4.23 C ATOM 479 O GLU 64 -17.194 -2.495 1.767 1.00 4.23 O ATOM 480 CB GLU 64 -19.151 -4.948 0.932 1.00 4.23 C ATOM 481 CG GLU 64 -19.381 -6.019 -0.136 1.00 4.23 C ATOM 482 CD GLU 64 -20.884 -6.173 -0.326 1.00 4.23 C ATOM 483 OE1 GLU 64 -21.649 -5.506 0.421 1.00 4.23 O ATOM 484 OE2 GLU 64 -21.289 -6.960 -1.223 1.00 4.23 O ATOM 485 N ASP 65 -17.993 -3.715 3.490 1.00 3.88 N ATOM 486 CA ASP 65 -17.944 -2.558 4.333 1.00 3.88 C ATOM 487 C ASP 65 -17.468 -2.941 5.698 1.00 3.88 C ATOM 488 O ASP 65 -18.272 -3.230 6.581 1.00 3.88 O ATOM 489 CB ASP 65 -19.317 -1.877 4.500 1.00 3.88 C ATOM 490 CG ASP 65 -19.175 -0.595 5.320 1.00 3.88 C ATOM 491 OD1 ASP 65 -18.048 -0.284 5.789 1.00 3.88 O ATOM 492 OD2 ASP 65 -20.216 0.098 5.486 1.00 3.88 O ATOM 493 N THR 66 -16.139 -2.963 5.908 1.00 3.28 N ATOM 494 CA THR 66 -15.620 -3.184 7.227 1.00 3.28 C ATOM 495 C THR 66 -14.215 -2.673 7.192 1.00 3.28 C ATOM 496 O THR 66 -13.678 -2.408 6.118 1.00 3.28 O ATOM 497 CB THR 66 -15.597 -4.632 7.648 1.00 3.28 C ATOM 498 OG1 THR 66 -15.283 -4.731 9.028 1.00 3.28 O ATOM 499 CG2 THR 66 -14.535 -5.391 6.834 1.00 3.28 C ATOM 500 N SER 67 -13.581 -2.496 8.366 1.00 3.01 N ATOM 501 CA SER 67 -12.220 -2.054 8.368 1.00 3.01 C ATOM 502 C SER 67 -11.396 -3.280 8.567 1.00 3.01 C ATOM 503 O SER 67 -11.657 -4.074 9.469 1.00 3.01 O ATOM 504 CB SER 67 -11.891 -1.080 9.512 1.00 3.01 C ATOM 505 OG SER 67 -12.627 0.124 9.358 1.00 3.01 O ATOM 506 N LYS 68 -10.380 -3.478 7.706 1.00 2.86 N ATOM 507 CA LYS 68 -9.582 -4.660 7.824 1.00 2.86 C ATOM 508 C LYS 68 -8.148 -4.274 7.674 1.00 2.86 C ATOM 509 O LYS 68 -7.830 -3.182 7.207 1.00 2.86 O ATOM 510 CB LYS 68 -9.883 -5.710 6.739 1.00 2.86 C ATOM 511 CG LYS 68 -11.308 -6.262 6.804 1.00 2.86 C ATOM 512 CD LYS 68 -11.611 -7.313 5.737 1.00 2.86 C ATOM 513 CE LYS 68 -10.893 -8.643 5.975 1.00 2.86 C ATOM 514 NZ LYS 68 -11.472 -9.693 5.108 1.00 2.86 N ATOM 515 N THR 69 -7.237 -5.174 8.095 1.00 2.70 N ATOM 516 CA THR 69 -5.837 -4.909 7.961 1.00 2.70 C ATOM 517 C THR 69 -5.307 -5.857 6.933 1.00 2.70 C ATOM 518 O THR 69 -5.659 -7.037 6.920 1.00 2.70 O ATOM 519 CB THR 69 -5.060 -5.127 9.226 1.00 2.70 C ATOM 520 OG1 THR 69 -5.185 -6.475 9.654 1.00 2.70 O ATOM 521 CG2 THR 69 -5.611 -4.194 10.318 1.00 2.70 C ATOM 522 N LEU 70 -4.457 -5.346 6.020 1.00 2.90 N ATOM 523 CA LEU 70 -3.915 -6.168 4.978 1.00 2.90 C ATOM 524 C LEU 70 -2.428 -6.035 5.007 1.00 2.90 C ATOM 525 O LEU 70 -1.891 -5.017 5.442 1.00 2.90 O ATOM 526 CB LEU 70 -4.379 -5.758 3.569 1.00 2.90 C ATOM 527 CG LEU 70 -5.903 -5.869 3.372 1.00 2.90 C ATOM 528 CD1 LEU 70 -6.338 -5.284 2.020 1.00 2.90 C ATOM 529 CD2 LEU 70 -6.364 -7.334 3.414 1.00 2.90 C ATOM 530 N GLU 71 -1.724 -7.094 4.560 1.00 3.01 N ATOM 531 CA GLU 71 -0.293 -7.068 4.526 1.00 3.01 C ATOM 532 C GLU 71 0.120 -6.207 3.377 1.00 3.01 C ATOM 533 O GLU 71 -0.447 -6.287 2.288 1.00 3.01 O ATOM 534 CB GLU 71 0.333 -8.454 4.304 1.00 3.01 C ATOM 535 CG GLU 71 0.073 -9.436 5.447 1.00 3.01 C ATOM 536 CD GLU 71 0.775 -10.744 5.112 1.00 3.01 C ATOM 537 OE1 GLU 71 1.380 -10.828 4.010 1.00 3.01 O ATOM 538 OE2 GLU 71 0.714 -11.676 5.956 1.00 3.01 O ATOM 539 N LEU 72 1.129 -5.345 3.604 1.00 3.08 N ATOM 540 CA LEU 72 1.607 -4.496 2.556 1.00 3.08 C ATOM 541 C LEU 72 2.496 -5.343 1.711 1.00 3.08 C ATOM 542 O LEU 72 3.311 -6.112 2.219 1.00 3.08 O ATOM 543 CB LEU 72 2.411 -3.289 3.095 1.00 3.08 C ATOM 544 CG LEU 72 2.883 -2.217 2.079 1.00 3.08 C ATOM 545 CD1 LEU 72 1.667 -1.505 1.465 1.00 3.08 C ATOM 546 CD2 LEU 72 3.777 -1.129 2.695 1.00 3.08 C ATOM 547 N LYS 73 2.360 -5.216 0.380 1.00 3.69 N ATOM 548 CA LYS 73 3.186 -5.978 -0.501 1.00 3.69 C ATOM 549 C LYS 73 3.820 -4.999 -1.426 1.00 3.69 C ATOM 550 O LYS 73 3.359 -3.867 -1.562 1.00 3.69 O ATOM 551 CB LYS 73 2.400 -7.000 -1.337 1.00 3.69 C ATOM 552 CG LYS 73 1.777 -8.097 -0.468 1.00 3.69 C ATOM 553 CD LYS 73 1.003 -9.156 -1.253 1.00 3.69 C ATOM 554 CE LYS 73 0.384 -10.235 -0.360 1.00 3.69 C ATOM 555 NZ LYS 73 -0.322 -11.236 -1.189 1.00 3.69 N ATOM 556 N ALA 74 4.934 -5.396 -2.063 1.00 4.43 N ATOM 557 CA ALA 74 5.571 -4.469 -2.942 1.00 4.43 C ATOM 558 C ALA 74 6.823 -5.109 -3.409 1.00 4.43 C ATOM 559 O ALA 74 7.046 -6.299 -3.195 1.00 4.43 O ATOM 560 CB ALA 74 5.962 -3.145 -2.263 1.00 4.43 C ATOM 561 N GLU 75 7.663 -4.326 -4.102 1.00 4.78 N ATOM 562 CA GLU 75 8.918 -4.864 -4.511 1.00 4.78 C ATOM 563 C GLU 75 9.589 -5.245 -3.230 1.00 4.78 C ATOM 564 O GLU 75 9.354 -4.620 -2.198 1.00 4.78 O ATOM 565 CB GLU 75 9.798 -3.842 -5.248 1.00 4.78 C ATOM 566 CG GLU 75 9.282 -3.450 -6.632 1.00 4.78 C ATOM 567 CD GLU 75 10.235 -2.403 -7.192 1.00 4.78 C ATOM 568 OE1 GLU 75 11.183 -2.017 -6.456 1.00 4.78 O ATOM 569 OE2 GLU 75 10.028 -1.975 -8.359 1.00 4.78 O ATOM 570 N GLY 76 10.425 -6.302 -3.262 1.00 4.27 N ATOM 571 CA GLY 76 11.009 -6.828 -2.059 1.00 4.27 C ATOM 572 C GLY 76 11.973 -5.850 -1.452 1.00 4.27 C ATOM 573 O GLY 76 12.654 -5.102 -2.151 1.00 4.27 O ATOM 574 N VAL 77 12.024 -5.850 -0.100 1.00 3.62 N ATOM 575 CA VAL 77 12.907 -5.041 0.687 1.00 3.62 C ATOM 576 C VAL 77 12.302 -4.986 2.061 1.00 3.62 C ATOM 577 O VAL 77 11.445 -5.804 2.388 1.00 3.62 O ATOM 578 CB VAL 77 13.089 -3.657 0.156 1.00 3.62 C ATOM 579 CG1 VAL 77 13.714 -3.743 -1.243 1.00 3.62 C ATOM 580 CG2 VAL 77 11.706 -2.995 0.092 1.00 3.62 C ATOM 581 N THR 78 12.733 -4.036 2.920 1.00 3.50 N ATOM 582 CA THR 78 12.181 -3.972 4.248 1.00 3.50 C ATOM 583 C THR 78 11.168 -2.869 4.271 1.00 3.50 C ATOM 584 O THR 78 11.374 -1.818 3.665 1.00 3.50 O ATOM 585 CB THR 78 13.204 -3.668 5.301 1.00 3.50 C ATOM 586 OG1 THR 78 14.191 -4.689 5.332 1.00 3.50 O ATOM 587 CG2 THR 78 12.502 -3.593 6.668 1.00 3.50 C ATOM 588 N VAL 79 10.026 -3.079 4.964 1.00 3.37 N ATOM 589 CA VAL 79 9.027 -2.049 4.931 1.00 3.37 C ATOM 590 C VAL 79 8.301 -1.967 6.234 1.00 3.37 C ATOM 591 O VAL 79 8.279 -2.910 7.025 1.00 3.37 O ATOM 592 CB VAL 79 7.974 -2.282 3.889 1.00 3.37 C ATOM 593 CG1 VAL 79 8.649 -2.255 2.507 1.00 3.37 C ATOM 594 CG2 VAL 79 7.323 -3.652 4.142 1.00 3.37 C ATOM 595 N GLN 80 7.700 -0.787 6.485 1.00 3.50 N ATOM 596 CA GLN 80 6.883 -0.572 7.641 1.00 3.50 C ATOM 597 C GLN 80 5.926 0.517 7.276 1.00 3.50 C ATOM 598 O GLN 80 6.268 1.412 6.506 1.00 3.50 O ATOM 599 CB GLN 80 7.668 -0.089 8.872 1.00 3.50 C ATOM 600 CG GLN 80 8.295 1.291 8.678 1.00 3.50 C ATOM 601 CD GLN 80 9.061 1.645 9.942 1.00 3.50 C ATOM 602 OE1 GLN 80 9.047 0.894 10.915 1.00 3.50 O ATOM 603 NE2 GLN 80 9.749 2.819 9.932 1.00 3.50 N ATOM 604 N PRO 81 4.720 0.466 7.766 1.00 3.23 N ATOM 605 CA PRO 81 4.301 -0.651 8.557 1.00 3.23 C ATOM 606 C PRO 81 4.012 -1.787 7.639 1.00 3.23 C ATOM 607 O PRO 81 3.716 -1.550 6.469 1.00 3.23 O ATOM 608 CB PRO 81 3.076 -0.185 9.340 1.00 3.23 C ATOM 609 CG PRO 81 2.439 0.871 8.424 1.00 3.23 C ATOM 610 CD PRO 81 3.642 1.569 7.768 1.00 3.23 C ATOM 611 N SER 82 4.124 -3.027 8.143 1.00 3.00 N ATOM 612 CA SER 82 3.848 -4.185 7.350 1.00 3.00 C ATOM 613 C SER 82 2.377 -4.263 7.084 1.00 3.00 C ATOM 614 O SER 82 1.961 -4.587 5.973 1.00 3.00 O ATOM 615 CB SER 82 4.264 -5.491 8.047 1.00 3.00 C ATOM 616 OG SER 82 5.676 -5.536 8.192 1.00 3.00 O ATOM 617 N THR 83 1.543 -3.946 8.097 1.00 2.77 N ATOM 618 CA THR 83 0.126 -4.092 7.911 1.00 2.77 C ATOM 619 C THR 83 -0.518 -2.746 7.974 1.00 2.77 C ATOM 620 O THR 83 -0.077 -1.863 8.707 1.00 2.77 O ATOM 621 CB THR 83 -0.530 -4.942 8.959 1.00 2.77 C ATOM 622 OG1 THR 83 -0.359 -4.356 10.242 1.00 2.77 O ATOM 623 CG2 THR 83 0.116 -6.338 8.943 1.00 2.77 C ATOM 624 N VAL 84 -1.593 -2.565 7.181 1.00 2.48 N ATOM 625 CA VAL 84 -2.290 -1.312 7.139 1.00 2.48 C ATOM 626 C VAL 84 -3.750 -1.594 7.277 1.00 2.48 C ATOM 627 O VAL 84 -4.216 -2.680 6.935 1.00 2.48 O ATOM 628 CB VAL 84 -2.097 -0.585 5.841 1.00 2.48 C ATOM 629 CG1 VAL 84 -0.603 -0.252 5.690 1.00 2.48 C ATOM 630 CG2 VAL 84 -2.565 -1.500 4.694 1.00 2.48 C ATOM 631 N LYS 85 -4.518 -0.620 7.803 1.00 2.50 N ATOM 632 CA LYS 85 -5.924 -0.858 7.942 1.00 2.50 C ATOM 633 C LYS 85 -6.635 -0.042 6.917 1.00 2.50 C ATOM 634 O LYS 85 -6.380 1.149 6.760 1.00 2.50 O ATOM 635 CB LYS 85 -6.494 -0.491 9.325 1.00 2.50 C ATOM 636 CG LYS 85 -5.971 -1.360 10.469 1.00 2.50 C ATOM 637 CD LYS 85 -6.552 -0.995 11.836 1.00 2.50 C ATOM 638 CE LYS 85 -5.992 -1.837 12.985 1.00 2.50 C ATOM 639 NZ LYS 85 -6.588 -1.405 14.267 1.00 2.50 N ATOM 640 N VAL 86 -7.550 -0.680 6.167 1.00 2.46 N ATOM 641 CA VAL 86 -8.264 0.051 5.169 1.00 2.46 C ATOM 642 C VAL 86 -9.702 -0.272 5.349 1.00 2.46 C ATOM 643 O VAL 86 -10.058 -1.389 5.720 1.00 2.46 O ATOM 644 CB VAL 86 -7.887 -0.339 3.769 1.00 2.46 C ATOM 645 CG1 VAL 86 -6.395 -0.036 3.549 1.00 2.46 C ATOM 646 CG2 VAL 86 -8.154 -1.844 3.594 1.00 2.46 C ATOM 647 N ASN 87 -10.575 0.719 5.104 1.00 2.60 N ATOM 648 CA ASN 87 -11.970 0.459 5.246 1.00 2.60 C ATOM 649 C ASN 87 -12.557 0.524 3.882 1.00 2.60 C ATOM 650 O ASN 87 -12.405 1.523 3.178 1.00 2.60 O ATOM 651 CB ASN 87 -12.712 1.502 6.100 1.00 2.60 C ATOM 652 CG ASN 87 -14.153 1.046 6.273 1.00 2.60 C ATOM 653 OD1 ASN 87 -14.891 0.893 5.300 1.00 2.60 O ATOM 654 ND2 ASN 87 -14.568 0.820 7.548 1.00 2.60 N ATOM 655 N LEU 88 -13.225 -0.564 3.462 1.00 2.65 N ATOM 656 CA LEU 88 -13.858 -0.536 2.184 1.00 2.65 C ATOM 657 C LEU 88 -15.318 -0.546 2.451 1.00 2.65 C ATOM 658 O LEU 88 -15.773 -1.176 3.402 1.00 2.65 O ATOM 659 CB LEU 88 -13.529 -1.741 1.288 1.00 2.65 C ATOM 660 CG LEU 88 -12.190 -1.589 0.544 1.00 2.65 C ATOM 661 CD1 LEU 88 -11.020 -1.396 1.522 1.00 2.65 C ATOM 662 CD2 LEU 88 -11.881 -2.829 -0.303 1.00 2.65 C ATOM 663 N LYS 89 -16.085 0.203 1.640 1.00 3.21 N ATOM 664 CA LYS 89 -17.501 0.247 1.832 1.00 3.21 C ATOM 665 C LYS 89 -18.120 0.266 0.479 1.00 3.21 C ATOM 666 O LYS 89 -17.449 0.512 -0.522 1.00 3.21 O ATOM 667 CB LYS 89 -17.990 1.520 2.546 1.00 3.21 C ATOM 668 CG LYS 89 -19.506 1.596 2.716 1.00 3.21 C ATOM 669 CD LYS 89 -19.984 2.875 3.409 1.00 3.21 C ATOM 670 CE LYS 89 -21.502 2.945 3.590 1.00 3.21 C ATOM 671 NZ LYS 89 -21.876 4.225 4.230 1.00 3.21 N ATOM 672 N VAL 90 -19.436 -0.005 0.417 1.00 3.97 N ATOM 673 CA VAL 90 -20.101 0.059 -0.845 1.00 3.97 C ATOM 674 C VAL 90 -19.958 1.476 -1.279 1.00 3.97 C ATOM 675 O VAL 90 -19.759 2.357 -0.444 1.00 3.97 O ATOM 676 CB VAL 90 -21.566 -0.262 -0.774 1.00 3.97 C ATOM 677 CG1 VAL 90 -21.726 -1.702 -0.259 1.00 3.97 C ATOM 678 CG2 VAL 90 -22.237 0.731 0.190 1.00 3.97 C ATOM 679 N THR 91 -20.016 1.727 -2.602 1.00 4.52 N ATOM 680 CA THR 91 -19.825 3.067 -3.071 1.00 4.52 C ATOM 681 C THR 91 -20.824 3.945 -2.398 1.00 4.52 C ATOM 682 O THR 91 -22.031 3.719 -2.473 1.00 4.52 O ATOM 683 CB THR 91 -19.968 3.212 -4.563 1.00 4.52 C ATOM 684 OG1 THR 91 -19.041 2.368 -5.227 1.00 4.52 O ATOM 685 CG2 THR 91 -19.699 4.671 -4.970 1.00 4.52 C ATOM 686 N GLN 92 -20.316 4.965 -1.678 1.00 5.37 N ATOM 687 CA GLN 92 -21.171 5.859 -0.957 1.00 5.37 C ATOM 688 C GLN 92 -20.393 7.107 -0.711 1.00 5.37 C ATOM 689 O GLN 92 -19.373 7.357 -1.350 1.00 5.37 O ATOM 690 CB GLN 92 -21.607 5.318 0.415 1.00 5.37 C ATOM 691 CG GLN 92 -20.440 5.084 1.379 1.00 5.37 C ATOM 692 CD GLN 92 -20.990 4.478 2.664 1.00 5.37 C ATOM 693 OE1 GLN 92 -22.177 4.166 2.750 1.00 5.37 O ATOM 694 NE2 GLN 92 -20.114 4.303 3.690 1.00 5.37 N ATOM 695 N LYS 93 -20.894 7.943 0.219 1.00 7.26 N ATOM 696 CA LYS 93 -20.228 9.160 0.567 1.00 7.26 C ATOM 697 C LYS 93 -18.790 8.799 0.911 1.00 7.26 C ATOM 698 O LYS 93 -17.869 9.332 0.238 1.00 7.26 O ATOM 699 CB LYS 93 -20.839 9.845 1.803 1.00 7.26 C ATOM 700 CG LYS 93 -20.145 11.151 2.198 1.00 7.26 C ATOM 701 CD LYS 93 -20.916 11.959 3.245 1.00 7.26 C ATOM 702 CE LYS 93 -20.227 13.265 3.645 1.00 7.26 C ATOM 703 NZ LYS 93 -21.038 13.978 4.657 1.00 7.26 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 644 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 63.03 60.0 170 100.0 170 ARMSMC SECONDARY STRUCTURE . . 47.75 67.9 106 100.0 106 ARMSMC SURFACE . . . . . . . . 66.95 57.8 116 100.0 116 ARMSMC BURIED . . . . . . . . 53.65 64.8 54 100.0 54 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.66 44.3 79 100.0 79 ARMSSC1 RELIABLE SIDE CHAINS . 84.62 45.5 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 88.51 41.2 51 100.0 51 ARMSSC1 SURFACE . . . . . . . . 82.96 46.4 56 100.0 56 ARMSSC1 BURIED . . . . . . . . 91.89 39.1 23 100.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.05 60.0 45 100.0 45 ARMSSC2 RELIABLE SIDE CHAINS . 60.01 66.7 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 64.03 65.4 26 100.0 26 ARMSSC2 SURFACE . . . . . . . . 57.62 68.6 35 100.0 35 ARMSSC2 BURIED . . . . . . . . 99.18 30.0 10 100.0 10 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.11 50.0 20 100.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 70.17 50.0 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 71.49 38.5 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 67.74 52.6 19 100.0 19 ARMSSC3 BURIED . . . . . . . . 74.72 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.64 50.0 10 100.0 10 ARMSSC4 RELIABLE SIDE CHAINS . 73.64 50.0 10 100.0 10 ARMSSC4 SECONDARY STRUCTURE . . 64.82 50.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 73.64 50.0 10 100.0 10 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.26 (Number of atoms: 86) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.26 86 100.0 86 CRMSCA CRN = ALL/NP . . . . . 0.0496 CRMSCA SECONDARY STRUCTURE . . 4.05 53 100.0 53 CRMSCA SURFACE . . . . . . . . 4.40 59 100.0 59 CRMSCA BURIED . . . . . . . . 3.95 27 100.0 27 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.37 426 100.0 426 CRMSMC SECONDARY STRUCTURE . . 4.10 264 100.0 264 CRMSMC SURFACE . . . . . . . . 4.51 292 100.0 292 CRMSMC BURIED . . . . . . . . 4.04 134 100.0 134 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.05 300 30.9 971 CRMSSC RELIABLE SIDE CHAINS . 6.26 246 26.8 917 CRMSSC SECONDARY STRUCTURE . . 5.26 191 30.6 625 CRMSSC SURFACE . . . . . . . . 6.50 219 33.6 651 CRMSSC BURIED . . . . . . . . 4.64 81 25.3 320 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.17 644 49.0 1315 CRMSALL SECONDARY STRUCTURE . . 4.64 403 48.1 837 CRMSALL SURFACE . . . . . . . . 5.49 455 51.3 887 CRMSALL BURIED . . . . . . . . 4.28 189 44.2 428 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.399 0.187 0.135 86 100.0 86 ERRCA SECONDARY STRUCTURE . . 1.384 0.194 0.145 53 100.0 53 ERRCA SURFACE . . . . . . . . 1.442 0.186 0.138 59 100.0 59 ERRCA BURIED . . . . . . . . 1.305 0.189 0.129 27 100.0 27 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.461 0.191 0.137 426 100.0 426 ERRMC SECONDARY STRUCTURE . . 1.412 0.194 0.145 264 100.0 264 ERRMC SURFACE . . . . . . . . 1.503 0.187 0.136 292 100.0 292 ERRMC BURIED . . . . . . . . 1.371 0.199 0.139 134 100.0 134 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.311 0.228 0.137 300 30.9 971 ERRSC RELIABLE SIDE CHAINS . 2.421 0.232 0.138 246 26.8 917 ERRSC SECONDARY STRUCTURE . . 1.929 0.214 0.135 191 30.6 625 ERRSC SURFACE . . . . . . . . 2.598 0.241 0.142 219 33.6 651 ERRSC BURIED . . . . . . . . 1.537 0.193 0.121 81 25.3 320 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.836 0.208 0.138 644 49.0 1315 ERRALL SECONDARY STRUCTURE . . 1.647 0.204 0.142 403 48.1 837 ERRALL SURFACE . . . . . . . . 1.991 0.211 0.139 455 51.3 887 ERRALL BURIED . . . . . . . . 1.464 0.201 0.136 189 44.2 428 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 6 20 69 86 86 86 DISTCA CA (P) 0.00 6.98 23.26 80.23 100.00 86 DISTCA CA (RMS) 0.00 1.47 2.15 3.51 4.26 DISTCA ALL (N) 2 40 132 442 621 644 1315 DISTALL ALL (P) 0.15 3.04 10.04 33.61 47.22 1315 DISTALL ALL (RMS) 0.88 1.56 2.21 3.49 4.69 DISTALL END of the results output