####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 83 ( 622), selected 83 , name T0572TS420_1-D1 # Molecule2: number of CA atoms 86 ( 1315), selected 83 , name T0572-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0572TS420_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 83 11 - 93 4.30 4.30 LCS_AVERAGE: 96.51 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 34 - 57 1.93 6.22 LONGEST_CONTINUOUS_SEGMENT: 24 35 - 58 1.99 5.77 LONGEST_CONTINUOUS_SEGMENT: 24 36 - 59 1.99 5.32 LCS_AVERAGE: 17.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 37 - 52 0.99 7.36 LONGEST_CONTINUOUS_SEGMENT: 16 38 - 53 0.81 8.18 LCS_AVERAGE: 9.83 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 83 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 11 S 11 8 10 83 4 6 10 10 12 16 30 41 58 64 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 12 V 12 8 10 83 4 6 10 10 12 16 26 41 58 63 72 74 77 80 81 83 83 83 83 83 LCS_GDT P 13 P 13 8 10 83 4 6 10 10 12 19 32 41 58 64 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 14 V 14 8 10 83 4 6 10 10 11 17 26 40 51 63 72 74 77 80 81 83 83 83 83 83 LCS_GDT K 15 K 15 8 10 83 3 6 10 10 12 19 34 47 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT L 16 L 16 8 10 83 3 6 10 10 12 19 32 48 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT E 17 E 17 8 10 83 4 6 10 19 29 39 47 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT L 18 L 18 8 10 83 4 6 11 21 29 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT T 19 T 19 7 10 83 4 9 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT G 20 G 20 7 10 83 4 6 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT D 21 D 21 4 6 83 4 4 5 19 35 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT K 22 K 22 4 6 83 4 6 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT A 23 A 23 6 6 83 4 6 15 21 31 40 48 56 59 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 24 S 24 6 6 83 4 6 15 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT N 25 N 25 6 7 83 4 4 6 10 15 27 48 55 59 66 69 74 77 80 81 83 83 83 83 83 LCS_GDT V 26 V 26 6 7 83 4 4 11 18 30 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 27 S 27 6 7 83 3 4 6 9 18 33 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 28 S 28 6 7 83 0 4 8 12 22 37 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT I 29 I 29 4 14 83 4 5 7 11 14 24 36 51 58 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 30 S 30 4 14 83 4 5 9 15 22 31 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT Y 31 Y 31 4 14 83 4 11 15 22 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 32 S 32 4 14 83 7 12 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT F 33 F 33 3 23 83 0 4 4 6 10 17 37 48 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT D 34 D 34 4 24 83 3 4 9 23 25 35 43 54 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT R 35 R 35 4 24 83 3 3 8 13 21 29 43 52 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT G 36 G 36 8 24 83 7 12 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT H 37 H 37 16 24 83 7 12 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 38 V 38 16 24 83 5 15 20 23 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT T 39 T 39 16 24 83 6 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT I 40 I 40 16 24 83 7 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 41 V 41 16 24 83 8 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT G 42 G 42 16 24 83 8 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 43 S 43 16 24 83 8 16 20 25 36 41 48 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT Q 44 Q 44 16 24 83 8 16 20 23 36 41 48 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT E 45 E 45 16 24 83 8 16 20 25 36 41 48 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT A 46 A 46 16 24 83 8 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT M 47 M 47 16 24 83 8 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT D 48 D 48 16 24 83 8 16 20 23 36 41 48 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT K 49 K 49 16 24 83 8 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT I 50 I 50 16 24 83 8 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT D 51 D 51 16 24 83 3 13 20 23 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 52 S 52 16 24 83 4 11 20 23 31 40 48 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT I 53 I 53 16 24 83 4 15 20 23 31 40 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT T 54 T 54 10 24 83 4 7 16 21 27 40 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 55 V 55 10 24 83 4 7 16 21 27 40 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT P 56 P 56 10 24 83 4 9 14 19 25 35 47 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 57 V 57 10 24 83 4 9 14 21 32 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT D 58 D 58 10 24 83 4 9 14 20 31 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT I 59 I 59 10 24 83 4 7 14 22 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 60 S 60 10 17 83 4 9 14 19 33 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT Q 61 Q 61 10 17 83 3 6 15 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 62 V 62 10 16 83 3 7 14 23 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT T 63 T 63 10 16 83 3 6 9 13 22 33 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT E 64 E 64 7 16 83 3 6 9 12 22 33 41 52 59 63 69 74 77 80 81 83 83 83 83 83 LCS_GDT D 65 D 65 7 16 83 3 6 8 12 15 19 34 46 53 60 64 71 77 80 81 83 83 83 83 83 LCS_GDT T 66 T 66 7 16 83 3 5 8 12 15 19 29 46 51 59 64 71 77 80 81 83 83 83 83 83 LCS_GDT S 67 S 67 7 16 83 4 6 8 12 15 19 31 46 52 59 64 71 77 80 81 83 83 83 83 83 LCS_GDT K 68 K 68 5 15 83 4 5 6 11 15 19 26 40 45 53 64 70 76 80 81 83 83 83 83 83 LCS_GDT T 69 T 69 5 15 83 4 5 8 12 14 18 24 31 36 52 60 64 73 79 81 83 83 83 83 83 LCS_GDT L 70 L 70 5 15 83 4 5 8 10 15 19 29 43 47 57 64 70 76 80 81 83 83 83 83 83 LCS_GDT E 71 E 71 5 15 83 3 5 8 12 14 18 24 31 36 48 58 63 67 73 80 83 83 83 83 83 LCS_GDT L 72 L 72 5 15 83 3 4 8 10 15 19 25 31 36 44 53 63 67 73 76 83 83 83 83 83 LCS_GDT K 73 K 73 5 7 83 3 4 6 14 21 28 38 46 51 58 67 71 77 80 81 83 83 83 83 83 LCS_GDT A 74 A 74 5 8 83 3 9 18 23 32 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT E 75 E 75 5 9 83 4 4 7 21 25 30 43 54 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT G 76 G 76 5 9 83 4 5 10 15 27 34 43 53 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 77 V 77 5 9 83 4 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT T 78 T 78 5 9 83 4 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 79 V 79 5 9 83 4 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT Q 80 Q 80 5 9 83 8 16 20 23 35 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT P 81 P 81 5 9 83 3 4 10 23 24 29 40 51 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT S 82 S 82 5 12 83 3 4 5 6 17 22 32 48 58 64 72 74 76 80 81 83 83 83 83 83 LCS_GDT T 83 T 83 5 12 83 3 14 18 21 25 30 39 51 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 84 V 84 7 12 83 4 12 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT K 85 K 85 7 12 83 4 5 12 24 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 86 V 86 7 12 83 7 12 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT N 87 N 87 7 12 83 7 12 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT L 88 L 88 7 12 83 7 12 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT K 89 K 89 7 12 83 3 9 19 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT V 90 V 90 7 12 83 3 9 14 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT T 91 T 91 6 12 83 3 5 12 18 24 37 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT Q 92 Q 92 6 12 83 3 4 8 15 25 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_GDT K 93 K 93 4 12 83 3 6 13 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 LCS_AVERAGE LCS_A: 41.44 ( 9.83 17.96 96.51 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 16 20 25 36 41 49 56 60 67 72 74 77 80 81 83 83 83 83 83 GDT PERCENT_AT 9.30 18.60 23.26 29.07 41.86 47.67 56.98 65.12 69.77 77.91 83.72 86.05 89.53 93.02 94.19 96.51 96.51 96.51 96.51 96.51 GDT RMS_LOCAL 0.18 0.61 0.85 1.40 1.76 1.93 2.40 2.57 2.82 3.16 3.47 3.54 3.78 3.97 4.06 4.30 4.30 4.30 4.30 4.30 GDT RMS_ALL_AT 11.31 7.88 7.69 4.61 4.58 4.58 4.43 4.48 4.45 4.43 4.45 4.43 4.34 4.33 4.32 4.30 4.30 4.30 4.30 4.30 # Checking swapping # possible swapping detected: E 17 E 17 # possible swapping detected: D 21 D 21 # possible swapping detected: Y 31 Y 31 # possible swapping detected: D 34 D 34 # possible swapping detected: E 45 E 45 # possible swapping detected: E 71 E 71 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA S 11 S 11 7.432 0 0.133 0.778 7.910 9.286 10.952 LGA V 12 V 12 7.357 0 0.254 1.343 9.443 9.286 6.735 LGA P 13 P 13 7.242 0 0.098 0.257 7.342 10.833 10.476 LGA V 14 V 14 7.265 0 0.037 1.163 10.743 11.667 9.116 LGA K 15 K 15 5.915 0 0.064 0.888 8.693 20.357 13.862 LGA L 16 L 16 5.719 0 0.175 0.196 6.887 22.619 18.929 LGA E 17 E 17 3.670 0 0.593 0.886 5.266 37.500 53.862 LGA L 18 L 18 3.297 0 0.193 0.216 3.763 51.786 48.393 LGA T 19 T 19 2.016 0 0.072 0.144 2.325 64.762 65.918 LGA G 20 G 20 1.953 0 0.630 0.630 4.229 61.905 61.905 LGA D 21 D 21 2.717 0 0.065 1.437 8.130 75.476 43.750 LGA K 22 K 22 2.409 0 0.038 1.072 13.248 73.571 37.831 LGA A 23 A 23 4.042 0 0.593 0.578 6.746 56.071 47.524 LGA S 24 S 24 1.289 0 0.054 0.639 2.650 69.048 71.746 LGA N 25 N 25 4.402 0 0.279 1.299 6.033 41.905 35.417 LGA V 26 V 26 2.851 0 0.168 1.129 4.132 55.357 51.293 LGA S 27 S 27 3.801 0 0.631 0.738 6.449 36.905 37.302 LGA S 28 S 28 3.618 0 0.249 0.754 4.196 48.333 49.206 LGA I 29 I 29 5.198 0 0.576 1.004 9.245 25.714 15.893 LGA S 30 S 30 3.983 0 0.025 0.662 5.407 52.143 45.317 LGA Y 31 Y 31 2.274 0 0.122 1.163 6.592 59.167 42.063 LGA S 32 S 32 1.059 0 0.160 0.263 4.872 61.071 60.079 LGA F 33 F 33 6.504 0 0.598 1.394 11.312 23.333 9.481 LGA D 34 D 34 6.099 0 0.635 0.807 8.924 19.286 13.155 LGA R 35 R 35 5.975 0 0.575 1.023 18.307 34.762 13.290 LGA G 36 G 36 1.153 0 0.644 0.644 3.161 73.571 73.571 LGA H 37 H 37 1.082 0 0.034 1.333 5.427 81.548 66.905 LGA V 38 V 38 2.529 0 0.120 0.199 3.777 66.905 58.707 LGA T 39 T 39 1.947 0 0.041 1.062 4.145 70.833 63.197 LGA I 40 I 40 1.329 0 0.067 0.136 1.460 81.429 81.429 LGA V 41 V 41 1.386 0 0.070 0.077 1.813 77.143 76.531 LGA G 42 G 42 2.042 0 0.042 0.042 2.208 66.786 66.786 LGA S 43 S 43 2.875 0 0.040 0.695 3.147 60.952 57.302 LGA Q 44 Q 44 3.134 0 0.045 0.903 8.505 51.786 31.958 LGA E 45 E 45 3.230 0 0.044 1.056 4.641 57.381 51.270 LGA A 46 A 46 1.292 0 0.026 0.038 2.033 77.262 78.095 LGA M 47 M 47 1.632 0 0.033 0.814 2.120 70.952 69.881 LGA D 48 D 48 2.497 0 0.085 1.163 5.553 64.762 52.262 LGA K 49 K 49 1.899 0 0.034 0.886 4.169 68.810 60.476 LGA I 50 I 50 1.782 0 0.029 0.155 2.229 68.810 69.821 LGA D 51 D 51 2.581 0 0.610 0.557 3.211 59.048 57.202 LGA S 52 S 52 3.690 0 0.040 0.709 4.914 45.000 42.460 LGA I 53 I 53 3.791 0 0.168 0.160 4.416 41.786 41.012 LGA T 54 T 54 3.860 0 0.104 1.076 5.860 45.000 40.408 LGA V 55 V 55 3.623 0 0.057 1.041 4.805 43.333 41.701 LGA P 56 P 56 4.210 0 0.101 0.415 6.011 40.238 34.422 LGA V 57 V 57 3.105 0 0.034 1.096 4.520 53.571 54.898 LGA D 58 D 58 2.924 0 0.123 0.919 3.571 60.952 56.429 LGA I 59 I 59 2.024 0 0.332 1.291 7.064 64.762 51.190 LGA S 60 S 60 2.499 0 0.151 0.634 3.742 62.857 58.651 LGA Q 61 Q 61 1.210 0 0.374 0.822 6.512 77.262 56.878 LGA V 62 V 62 2.113 0 0.092 1.172 4.371 65.119 62.313 LGA T 63 T 63 3.917 0 0.222 1.129 6.010 40.476 37.211 LGA E 64 E 64 4.964 0 0.151 0.813 10.139 34.286 19.524 LGA D 65 D 65 6.174 0 0.029 0.657 7.672 16.429 12.857 LGA T 66 T 66 6.609 0 0.074 0.191 7.736 17.262 14.694 LGA S 67 S 67 6.553 0 0.083 0.651 9.453 11.190 8.492 LGA K 68 K 68 7.720 0 0.039 1.008 12.194 10.952 5.185 LGA T 69 T 69 9.119 0 0.080 1.045 13.066 1.905 1.088 LGA L 70 L 70 8.081 0 0.109 0.901 9.935 3.452 6.071 LGA E 71 E 71 10.914 0 0.087 0.793 16.080 0.119 0.053 LGA L 72 L 72 10.874 0 0.626 0.570 13.024 0.000 0.000 LGA K 73 K 73 7.827 0 0.046 1.358 8.936 20.357 10.847 LGA A 74 A 74 3.003 0 0.023 0.038 5.139 44.167 45.333 LGA E 75 E 75 4.770 0 0.597 1.228 8.009 32.024 20.952 LGA G 76 G 76 4.944 0 0.091 0.091 5.741 30.357 30.357 LGA V 77 V 77 2.267 0 0.039 1.125 3.117 62.857 65.102 LGA T 78 T 78 1.859 0 0.034 1.054 3.381 75.000 72.177 LGA V 79 V 79 1.637 0 0.022 0.958 2.655 66.905 66.054 LGA Q 80 Q 80 2.901 0 0.112 1.331 4.758 53.810 48.942 LGA P 81 P 81 5.877 0 0.650 0.521 6.964 25.357 23.946 LGA S 82 S 82 7.422 0 0.139 0.784 11.012 10.000 6.667 LGA T 83 T 83 6.407 0 0.575 1.359 9.427 21.786 13.878 LGA V 84 V 84 1.150 0 0.159 1.248 5.104 73.095 58.163 LGA K 85 K 85 2.195 0 0.093 0.954 9.837 75.119 45.714 LGA V 86 V 86 0.732 0 0.123 0.142 2.070 88.214 80.476 LGA N 87 N 87 0.611 0 0.037 1.147 3.597 88.214 75.179 LGA L 88 L 88 1.366 0 0.153 1.160 4.911 90.595 76.607 LGA K 89 K 89 1.366 0 0.045 0.559 5.308 81.429 59.048 LGA V 90 V 90 1.382 0 0.033 0.146 3.514 65.833 68.844 LGA T 91 T 91 3.924 0 0.181 1.008 7.131 57.619 43.401 LGA Q 92 Q 92 3.164 0 0.051 1.409 7.190 53.810 34.233 LGA K 93 K 93 1.633 0 0.215 1.051 6.971 66.905 45.556 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 83 332 332 100.00 621 621 100.00 86 SUMMARY(RMSD_GDC): 4.303 4.245 5.323 47.087 40.999 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 83 86 4.0 56 2.57 52.326 46.692 2.098 LGA_LOCAL RMSD: 2.569 Number of atoms: 56 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.479 Number of assigned atoms: 83 Std_ASGN_ATOMS RMSD: 4.303 Standard rmsd on all 83 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.432940 * X + -0.809729 * Y + 0.396108 * Z + 2.565091 Y_new = -0.700840 * X + 0.578721 * Y + 0.417021 * Z + 1.822015 Z_new = -0.566910 * X + -0.097063 * Y + -0.818042 * Z + 6.273401 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.124162 0.602750 -3.023492 [DEG: -121.7055 34.5350 -173.2333 ] ZXZ: 2.381908 2.528794 -1.740366 [DEG: 136.4733 144.8892 -99.7156 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0572TS420_1-D1 REMARK 2: T0572-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0572TS420_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 83 86 4.0 56 2.57 46.692 4.30 REMARK ---------------------------------------------------------- MOLECULE T0572TS420_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0572 REMARK MODEL 1 REMARK PARENT 2kq1_A ATOM 1 N SER 11 6.982 8.977 0.844 1.00 0.00 N ATOM 2 CA SER 11 5.722 8.237 1.074 1.00 0.00 C ATOM 3 CB SER 11 4.754 9.083 1.919 1.00 0.00 C ATOM 4 OG SER 11 5.337 9.381 3.180 1.00 0.00 O ATOM 5 C SER 11 5.063 7.934 -0.231 1.00 0.00 C ATOM 6 O SER 11 5.470 8.441 -1.275 1.00 0.00 O ATOM 7 N VAL 12 4.022 7.083 -0.202 1.00 0.00 N ATOM 8 CA VAL 12 3.355 6.745 -1.423 1.00 0.00 C ATOM 9 CB VAL 12 3.396 5.279 -1.737 1.00 0.00 C ATOM 10 CG1 VAL 12 2.748 4.519 -0.569 1.00 0.00 C ATOM 11 CG2 VAL 12 2.689 5.049 -3.085 1.00 0.00 C ATOM 12 C VAL 12 1.919 7.123 -1.279 1.00 0.00 C ATOM 13 O VAL 12 1.378 7.211 -0.177 1.00 0.00 O ATOM 14 N PRO 13 1.309 7.396 -2.395 1.00 0.00 N ATOM 15 CA PRO 13 -0.088 7.723 -2.396 1.00 0.00 C ATOM 16 CD PRO 13 2.016 8.037 -3.490 1.00 0.00 C ATOM 17 CB PRO 13 -0.355 8.448 -3.720 1.00 0.00 C ATOM 18 CG PRO 13 0.926 8.245 -4.550 1.00 0.00 C ATOM 19 C PRO 13 -0.875 6.466 -2.219 1.00 0.00 C ATOM 20 O PRO 13 -0.344 5.393 -2.495 1.00 0.00 O ATOM 21 N VAL 14 -2.134 6.565 -1.749 1.00 0.00 N ATOM 22 CA VAL 14 -2.920 5.380 -1.581 1.00 0.00 C ATOM 23 CB VAL 14 -3.924 5.447 -0.471 1.00 0.00 C ATOM 24 CG1 VAL 14 -4.911 6.593 -0.764 1.00 0.00 C ATOM 25 CG2 VAL 14 -4.606 4.072 -0.365 1.00 0.00 C ATOM 26 C VAL 14 -3.699 5.193 -2.837 1.00 0.00 C ATOM 27 O VAL 14 -4.249 6.144 -3.386 1.00 0.00 O ATOM 28 N LYS 15 -3.755 3.950 -3.338 1.00 0.00 N ATOM 29 CA LYS 15 -4.459 3.747 -4.566 1.00 0.00 C ATOM 30 CB LYS 15 -3.516 3.316 -5.703 1.00 0.00 C ATOM 31 CG LYS 15 -4.168 3.208 -7.084 1.00 0.00 C ATOM 32 CD LYS 15 -4.457 4.562 -7.732 1.00 0.00 C ATOM 33 CE LYS 15 -4.963 4.448 -9.171 1.00 0.00 C ATOM 34 NZ LYS 15 -5.029 5.790 -9.794 1.00 0.00 N ATOM 35 C LYS 15 -5.432 2.630 -4.367 1.00 0.00 C ATOM 36 O LYS 15 -5.059 1.549 -3.918 1.00 0.00 O ATOM 37 N LEU 16 -6.722 2.865 -4.676 1.00 0.00 N ATOM 38 CA LEU 16 -7.643 1.772 -4.607 1.00 0.00 C ATOM 39 CB LEU 16 -8.958 2.110 -3.887 1.00 0.00 C ATOM 40 CG LEU 16 -8.736 2.273 -2.371 1.00 0.00 C ATOM 41 CD1 LEU 16 -7.699 3.366 -2.074 1.00 0.00 C ATOM 42 CD2 LEU 16 -10.057 2.492 -1.620 1.00 0.00 C ATOM 43 C LEU 16 -7.923 1.416 -6.023 1.00 0.00 C ATOM 44 O LEU 16 -8.800 1.988 -6.669 1.00 0.00 O ATOM 45 N GLU 17 -7.154 0.442 -6.538 1.00 0.00 N ATOM 46 CA GLU 17 -7.242 0.071 -7.916 1.00 0.00 C ATOM 47 CB GLU 17 -6.185 -0.973 -8.317 1.00 0.00 C ATOM 48 CG GLU 17 -4.759 -0.415 -8.391 1.00 0.00 C ATOM 49 CD GLU 17 -4.603 0.272 -9.739 1.00 0.00 C ATOM 50 OE1 GLU 17 -5.593 0.261 -10.518 1.00 0.00 O ATOM 51 OE2 GLU 17 -3.497 0.814 -10.011 1.00 0.00 O ATOM 52 C GLU 17 -8.580 -0.506 -8.186 1.00 0.00 C ATOM 53 O GLU 17 -9.206 -0.202 -9.199 1.00 0.00 O ATOM 54 N LEU 18 -9.079 -1.340 -7.265 1.00 0.00 N ATOM 55 CA LEU 18 -10.338 -1.960 -7.524 1.00 0.00 C ATOM 56 CB LEU 18 -11.447 -0.924 -7.790 1.00 0.00 C ATOM 57 CG LEU 18 -11.587 0.149 -6.687 1.00 0.00 C ATOM 58 CD1 LEU 18 -12.760 1.103 -6.977 1.00 0.00 C ATOM 59 CD2 LEU 18 -11.642 -0.481 -5.287 1.00 0.00 C ATOM 60 C LEU 18 -10.153 -2.740 -8.786 1.00 0.00 C ATOM 61 O LEU 18 -10.493 -2.277 -9.873 1.00 0.00 O ATOM 62 N THR 19 -9.602 -3.961 -8.675 1.00 0.00 N ATOM 63 CA THR 19 -9.441 -4.760 -9.853 1.00 0.00 C ATOM 64 CB THR 19 -8.107 -5.430 -9.968 1.00 0.00 C ATOM 65 OG1 THR 19 -7.064 -4.464 -9.993 1.00 0.00 O ATOM 66 CG2 THR 19 -8.098 -6.259 -11.264 1.00 0.00 C ATOM 67 C THR 19 -10.448 -5.838 -9.725 1.00 0.00 C ATOM 68 O THR 19 -10.396 -6.644 -8.798 1.00 0.00 O ATOM 69 N GLY 20 -11.409 -5.878 -10.658 1.00 0.00 N ATOM 70 CA GLY 20 -12.434 -6.861 -10.514 1.00 0.00 C ATOM 71 C GLY 20 -13.329 -6.322 -9.452 1.00 0.00 C ATOM 72 O GLY 20 -14.235 -7.005 -8.973 1.00 0.00 O ATOM 73 N ASP 21 -13.075 -5.058 -9.051 1.00 0.00 N ATOM 74 CA ASP 21 -13.884 -4.434 -8.049 1.00 0.00 C ATOM 75 CB ASP 21 -13.203 -3.247 -7.352 1.00 0.00 C ATOM 76 CG ASP 21 -14.170 -2.737 -6.294 1.00 0.00 C ATOM 77 OD1 ASP 21 -15.007 -3.556 -5.828 1.00 0.00 O ATOM 78 OD2 ASP 21 -14.092 -1.529 -5.944 1.00 0.00 O ATOM 79 C ASP 21 -15.085 -3.905 -8.752 1.00 0.00 C ATOM 80 O ASP 21 -14.972 -3.116 -9.690 1.00 0.00 O ATOM 81 N LYS 22 -16.278 -4.349 -8.308 1.00 0.00 N ATOM 82 CA LYS 22 -17.502 -3.946 -8.939 1.00 0.00 C ATOM 83 CB LYS 22 -18.705 -4.830 -8.557 1.00 0.00 C ATOM 84 CG LYS 22 -20.016 -4.413 -9.234 1.00 0.00 C ATOM 85 CD LYS 22 -21.157 -5.420 -9.051 1.00 0.00 C ATOM 86 CE LYS 22 -22.512 -4.928 -9.567 1.00 0.00 C ATOM 87 NZ LYS 22 -23.552 -5.945 -9.291 1.00 0.00 N ATOM 88 C LYS 22 -17.810 -2.563 -8.487 1.00 0.00 C ATOM 89 O LYS 22 -17.719 -2.251 -7.302 1.00 0.00 O ATOM 90 N ALA 23 -18.168 -1.691 -9.448 1.00 0.00 N ATOM 91 CA ALA 23 -18.489 -0.334 -9.128 1.00 0.00 C ATOM 92 CB ALA 23 -18.809 0.511 -10.369 1.00 0.00 C ATOM 93 C ALA 23 -19.711 -0.343 -8.276 1.00 0.00 C ATOM 94 O ALA 23 -19.801 0.386 -7.290 1.00 0.00 O ATOM 95 N SER 24 -20.699 -1.174 -8.650 1.00 0.00 N ATOM 96 CA SER 24 -21.920 -1.226 -7.908 1.00 0.00 C ATOM 97 CB SER 24 -23.017 -2.038 -8.620 1.00 0.00 C ATOM 98 OG SER 24 -24.206 -2.052 -7.837 1.00 0.00 O ATOM 99 C SER 24 -21.654 -1.858 -6.584 1.00 0.00 C ATOM 100 O SER 24 -22.323 -1.562 -5.597 1.00 0.00 O ATOM 101 N ASN 25 -20.642 -2.743 -6.525 1.00 0.00 N ATOM 102 CA ASN 25 -20.383 -3.469 -5.316 1.00 0.00 C ATOM 103 CB ASN 25 -19.184 -4.418 -5.446 1.00 0.00 C ATOM 104 CG ASN 25 -19.080 -5.293 -4.202 1.00 0.00 C ATOM 105 OD1 ASN 25 -19.594 -4.996 -3.123 1.00 0.00 O ATOM 106 ND2 ASN 25 -18.367 -6.440 -4.362 1.00 0.00 N ATOM 107 C ASN 25 -20.068 -2.528 -4.200 1.00 0.00 C ATOM 108 O ASN 25 -20.677 -2.614 -3.135 1.00 0.00 O ATOM 109 N VAL 26 -19.125 -1.595 -4.404 1.00 0.00 N ATOM 110 CA VAL 26 -18.754 -0.800 -3.274 1.00 0.00 C ATOM 111 CB VAL 26 -17.515 -1.325 -2.622 1.00 0.00 C ATOM 112 CG1 VAL 26 -17.800 -2.756 -2.130 1.00 0.00 C ATOM 113 CG2 VAL 26 -16.361 -1.249 -3.636 1.00 0.00 C ATOM 114 C VAL 26 -18.454 0.586 -3.730 1.00 0.00 C ATOM 115 O VAL 26 -18.273 0.841 -4.920 1.00 0.00 O ATOM 116 N SER 27 -18.415 1.525 -2.762 1.00 0.00 N ATOM 117 CA SER 27 -18.059 2.885 -3.026 1.00 0.00 C ATOM 118 CB SER 27 -19.155 3.905 -2.672 1.00 0.00 C ATOM 119 OG SER 27 -19.315 3.985 -1.262 1.00 0.00 O ATOM 120 C SER 27 -16.917 3.163 -2.108 1.00 0.00 C ATOM 121 O SER 27 -16.733 2.466 -1.112 1.00 0.00 O ATOM 122 N SER 28 -16.091 4.178 -2.426 1.00 0.00 N ATOM 123 CA SER 28 -15.018 4.430 -1.517 1.00 0.00 C ATOM 124 CB SER 28 -13.663 4.682 -2.201 1.00 0.00 C ATOM 125 OG SER 28 -13.729 5.828 -3.040 1.00 0.00 O ATOM 126 C SER 28 -15.388 5.636 -0.732 1.00 0.00 C ATOM 127 O SER 28 -15.247 6.771 -1.187 1.00 0.00 O ATOM 128 N ILE 29 -15.911 5.392 0.481 1.00 0.00 N ATOM 129 CA ILE 29 -16.290 6.460 1.343 1.00 0.00 C ATOM 130 CB ILE 29 -17.011 5.983 2.566 1.00 0.00 C ATOM 131 CG2 ILE 29 -17.206 7.192 3.494 1.00 0.00 C ATOM 132 CG1 ILE 29 -18.322 5.288 2.162 1.00 0.00 C ATOM 133 CD1 ILE 29 -19.274 6.193 1.378 1.00 0.00 C ATOM 134 C ILE 29 -15.047 7.151 1.783 1.00 0.00 C ATOM 135 O ILE 29 -14.956 8.375 1.720 1.00 0.00 O ATOM 136 N SER 30 -14.038 6.371 2.219 1.00 0.00 N ATOM 137 CA SER 30 -12.844 6.997 2.695 1.00 0.00 C ATOM 138 CB SER 30 -12.826 7.172 4.222 1.00 0.00 C ATOM 139 OG SER 30 -13.895 8.018 4.618 1.00 0.00 O ATOM 140 C SER 30 -11.671 6.147 2.324 1.00 0.00 C ATOM 141 O SER 30 -11.813 4.974 1.984 1.00 0.00 O ATOM 142 N TYR 31 -10.471 6.759 2.385 1.00 0.00 N ATOM 143 CA TYR 31 -9.215 6.131 2.091 1.00 0.00 C ATOM 144 CB TYR 31 -8.408 6.777 0.941 1.00 0.00 C ATOM 145 CG TYR 31 -9.137 6.862 -0.359 1.00 0.00 C ATOM 146 CD1 TYR 31 -9.077 5.839 -1.274 1.00 0.00 C ATOM 147 CD2 TYR 31 -9.870 7.981 -0.676 1.00 0.00 C ATOM 148 CE1 TYR 31 -9.734 5.928 -2.480 1.00 0.00 C ATOM 149 CE2 TYR 31 -10.531 8.082 -1.877 1.00 0.00 C ATOM 150 CZ TYR 31 -10.466 7.050 -2.781 1.00 0.00 C ATOM 151 OH TYR 31 -11.144 7.152 -4.013 1.00 0.00 O ATOM 152 C TYR 31 -8.366 6.480 3.267 1.00 0.00 C ATOM 153 O TYR 31 -8.800 7.226 4.144 1.00 0.00 O ATOM 154 N SER 32 -7.140 5.924 3.345 1.00 0.00 N ATOM 155 CA SER 32 -6.294 6.407 4.392 1.00 0.00 C ATOM 156 CB SER 32 -4.887 5.793 4.432 1.00 0.00 C ATOM 157 OG SER 32 -4.911 4.527 5.074 1.00 0.00 O ATOM 158 C SER 32 -6.121 7.843 4.076 1.00 0.00 C ATOM 159 O SER 32 -5.779 8.210 2.953 1.00 0.00 O ATOM 160 N PHE 33 -6.363 8.692 5.082 1.00 0.00 N ATOM 161 CA PHE 33 -6.323 10.105 4.898 1.00 0.00 C ATOM 162 CB PHE 33 -6.776 10.834 6.165 1.00 0.00 C ATOM 163 CG PHE 33 -8.161 10.340 6.413 1.00 0.00 C ATOM 164 CD1 PHE 33 -8.360 9.206 7.168 1.00 0.00 C ATOM 165 CD2 PHE 33 -9.257 10.982 5.880 1.00 0.00 C ATOM 166 CE1 PHE 33 -9.628 8.732 7.406 1.00 0.00 C ATOM 167 CE2 PHE 33 -10.527 10.511 6.114 1.00 0.00 C ATOM 168 CZ PHE 33 -10.715 9.386 6.881 1.00 0.00 C ATOM 169 C PHE 33 -4.920 10.477 4.570 1.00 0.00 C ATOM 170 O PHE 33 -4.680 11.315 3.703 1.00 0.00 O ATOM 171 N ASP 34 -3.951 9.851 5.258 1.00 0.00 N ATOM 172 CA ASP 34 -2.585 10.190 5.004 1.00 0.00 C ATOM 173 CB ASP 34 -1.723 10.260 6.278 1.00 0.00 C ATOM 174 CG ASP 34 -2.196 11.456 7.097 1.00 0.00 C ATOM 175 OD1 ASP 34 -3.368 11.433 7.559 1.00 0.00 O ATOM 176 OD2 ASP 34 -1.389 12.406 7.275 1.00 0.00 O ATOM 177 C ASP 34 -1.995 9.159 4.099 1.00 0.00 C ATOM 178 O ASP 34 -2.593 8.115 3.840 1.00 0.00 O ATOM 179 N ARG 35 -0.802 9.469 3.552 1.00 0.00 N ATOM 180 CA ARG 35 -0.067 8.568 2.714 1.00 0.00 C ATOM 181 CB ARG 35 1.041 9.231 1.868 1.00 0.00 C ATOM 182 CG ARG 35 0.580 10.077 0.676 1.00 0.00 C ATOM 183 CD ARG 35 1.760 10.674 -0.105 1.00 0.00 C ATOM 184 NE ARG 35 1.220 11.475 -1.239 1.00 0.00 N ATOM 185 CZ ARG 35 2.035 12.320 -1.944 1.00 0.00 C ATOM 186 NH1 ARG 35 3.357 12.432 -1.618 1.00 0.00 N ATOM 187 NH2 ARG 35 1.524 13.071 -2.960 1.00 0.00 N ATOM 188 C ARG 35 0.644 7.620 3.625 1.00 0.00 C ATOM 189 O ARG 35 0.661 7.802 4.841 1.00 0.00 O ATOM 190 N GLY 36 1.221 6.548 3.050 1.00 0.00 N ATOM 191 CA GLY 36 1.971 5.618 3.839 1.00 0.00 C ATOM 192 C GLY 36 3.390 5.736 3.389 1.00 0.00 C ATOM 193 O GLY 36 3.660 6.202 2.284 1.00 0.00 O ATOM 194 N HIS 37 4.346 5.318 4.242 1.00 0.00 N ATOM 195 CA HIS 37 5.718 5.442 3.850 1.00 0.00 C ATOM 196 ND1 HIS 37 8.972 6.102 4.172 1.00 0.00 N ATOM 197 CG HIS 37 7.823 6.859 4.189 1.00 0.00 C ATOM 198 CB HIS 37 6.506 6.407 4.752 1.00 0.00 C ATOM 199 NE2 HIS 37 9.494 8.065 3.267 1.00 0.00 N ATOM 200 CD2 HIS 37 8.159 8.055 3.629 1.00 0.00 C ATOM 201 CE1 HIS 37 9.941 6.871 3.611 1.00 0.00 C ATOM 202 C HIS 37 6.343 4.089 3.981 1.00 0.00 C ATOM 203 O HIS 37 6.112 3.384 4.962 1.00 0.00 O ATOM 204 N VAL 38 7.145 3.687 2.980 1.00 0.00 N ATOM 205 CA VAL 38 7.781 2.407 3.026 1.00 0.00 C ATOM 206 CB VAL 38 7.483 1.552 1.820 1.00 0.00 C ATOM 207 CG1 VAL 38 8.023 2.253 0.562 1.00 0.00 C ATOM 208 CG2 VAL 38 8.058 0.142 2.044 1.00 0.00 C ATOM 209 C VAL 38 9.256 2.623 3.113 1.00 0.00 C ATOM 210 O VAL 38 9.837 3.387 2.342 1.00 0.00 O ATOM 211 N THR 39 9.901 1.946 4.082 1.00 0.00 N ATOM 212 CA THR 39 11.316 2.089 4.240 1.00 0.00 C ATOM 213 CB THR 39 11.727 2.378 5.649 1.00 0.00 C ATOM 214 OG1 THR 39 11.336 1.308 6.494 1.00 0.00 O ATOM 215 CG2 THR 39 11.058 3.691 6.093 1.00 0.00 C ATOM 216 C THR 39 11.923 0.783 3.872 1.00 0.00 C ATOM 217 O THR 39 11.457 -0.275 4.293 1.00 0.00 O ATOM 218 N ILE 40 12.985 0.824 3.049 1.00 0.00 N ATOM 219 CA ILE 40 13.564 -0.415 2.634 1.00 0.00 C ATOM 220 CB ILE 40 13.313 -0.692 1.186 1.00 0.00 C ATOM 221 CG2 ILE 40 11.793 -0.785 0.987 1.00 0.00 C ATOM 222 CG1 ILE 40 13.973 0.390 0.320 1.00 0.00 C ATOM 223 CD1 ILE 40 13.933 0.067 -1.169 1.00 0.00 C ATOM 224 C ILE 40 15.034 -0.374 2.861 1.00 0.00 C ATOM 225 O ILE 40 15.705 0.605 2.533 1.00 0.00 O ATOM 226 N VAL 41 15.565 -1.461 3.451 1.00 0.00 N ATOM 227 CA VAL 41 16.972 -1.567 3.692 1.00 0.00 C ATOM 228 CB VAL 41 17.325 -1.581 5.148 1.00 0.00 C ATOM 229 CG1 VAL 41 18.845 -1.780 5.297 1.00 0.00 C ATOM 230 CG2 VAL 41 16.812 -0.272 5.766 1.00 0.00 C ATOM 231 C VAL 41 17.416 -2.858 3.096 1.00 0.00 C ATOM 232 O VAL 41 16.683 -3.847 3.096 1.00 0.00 O ATOM 233 N GLY 42 18.648 -2.881 2.558 1.00 0.00 N ATOM 234 CA GLY 42 19.099 -4.092 1.950 1.00 0.00 C ATOM 235 C GLY 42 20.394 -3.820 1.263 1.00 0.00 C ATOM 236 O GLY 42 21.149 -2.927 1.645 1.00 0.00 O ATOM 237 N SER 43 20.672 -4.618 0.216 1.00 0.00 N ATOM 238 CA SER 43 21.902 -4.509 -0.500 1.00 0.00 C ATOM 239 CB SER 43 22.145 -5.672 -1.476 1.00 0.00 C ATOM 240 OG SER 43 21.127 -5.688 -2.464 1.00 0.00 O ATOM 241 C SER 43 21.899 -3.240 -1.279 1.00 0.00 C ATOM 242 O SER 43 20.854 -2.669 -1.591 1.00 0.00 O ATOM 243 N GLN 44 23.117 -2.755 -1.573 1.00 0.00 N ATOM 244 CA GLN 44 23.325 -1.554 -2.320 1.00 0.00 C ATOM 245 CB GLN 44 24.805 -1.143 -2.378 1.00 0.00 C ATOM 246 CG GLN 44 25.679 -2.148 -3.131 1.00 0.00 C ATOM 247 CD GLN 44 27.034 -1.498 -3.361 1.00 0.00 C ATOM 248 OE1 GLN 44 27.811 -1.281 -2.432 1.00 0.00 O ATOM 249 NE2 GLN 44 27.325 -1.164 -4.646 1.00 0.00 N ATOM 250 C GLN 44 22.864 -1.774 -3.727 1.00 0.00 C ATOM 251 O GLN 44 22.277 -0.884 -4.340 1.00 0.00 O ATOM 252 N GLU 45 23.100 -2.986 -4.268 1.00 0.00 N ATOM 253 CA GLU 45 22.816 -3.269 -5.647 1.00 0.00 C ATOM 254 CB GLU 45 23.037 -4.755 -5.996 1.00 0.00 C ATOM 255 CG GLU 45 24.466 -5.265 -5.786 1.00 0.00 C ATOM 256 CD GLU 45 25.247 -5.126 -7.085 1.00 0.00 C ATOM 257 OE1 GLU 45 24.926 -4.194 -7.869 1.00 0.00 O ATOM 258 OE2 GLU 45 26.175 -5.949 -7.313 1.00 0.00 O ATOM 259 C GLU 45 21.363 -3.024 -5.882 1.00 0.00 C ATOM 260 O GLU 45 20.975 -2.362 -6.845 1.00 0.00 O ATOM 261 N ALA 46 20.511 -3.543 -4.986 1.00 0.00 N ATOM 262 CA ALA 46 19.098 -3.426 -5.173 1.00 0.00 C ATOM 263 CB ALA 46 18.288 -4.195 -4.111 1.00 0.00 C ATOM 264 C ALA 46 18.701 -1.985 -5.120 1.00 0.00 C ATOM 265 O ALA 46 17.846 -1.543 -5.886 1.00 0.00 O ATOM 266 N MET 47 19.337 -1.206 -4.226 1.00 0.00 N ATOM 267 CA MET 47 18.928 0.150 -3.981 1.00 0.00 C ATOM 268 CB MET 47 19.795 0.832 -2.906 1.00 0.00 C ATOM 269 CG MET 47 19.690 0.178 -1.524 1.00 0.00 C ATOM 270 SD MET 47 20.880 0.779 -0.284 1.00 0.00 S ATOM 271 CE MET 47 20.129 2.420 -0.080 1.00 0.00 C ATOM 272 C MET 47 19.023 0.982 -5.221 1.00 0.00 C ATOM 273 O MET 47 18.108 1.746 -5.526 1.00 0.00 O ATOM 274 N ASP 48 20.118 0.863 -5.991 1.00 0.00 N ATOM 275 CA ASP 48 20.243 1.746 -7.117 1.00 0.00 C ATOM 276 CB ASP 48 21.597 1.653 -7.848 1.00 0.00 C ATOM 277 CG ASP 48 21.746 0.268 -8.456 1.00 0.00 C ATOM 278 OD1 ASP 48 21.134 0.038 -9.533 1.00 0.00 O ATOM 279 OD2 ASP 48 22.467 -0.579 -7.864 1.00 0.00 O ATOM 280 C ASP 48 19.155 1.465 -8.103 1.00 0.00 C ATOM 281 O ASP 48 18.596 2.382 -8.702 1.00 0.00 O ATOM 282 N LYS 49 18.826 0.176 -8.291 1.00 0.00 N ATOM 283 CA LYS 49 17.854 -0.226 -9.266 1.00 0.00 C ATOM 284 CB LYS 49 17.704 -1.750 -9.372 1.00 0.00 C ATOM 285 CG LYS 49 18.933 -2.481 -9.911 1.00 0.00 C ATOM 286 CD LYS 49 18.820 -3.995 -9.751 1.00 0.00 C ATOM 287 CE LYS 49 20.000 -4.793 -10.306 1.00 0.00 C ATOM 288 NZ LYS 49 19.749 -6.240 -10.117 1.00 0.00 N ATOM 289 C LYS 49 16.493 0.286 -8.919 1.00 0.00 C ATOM 290 O LYS 49 15.741 0.700 -9.800 1.00 0.00 O ATOM 291 N ILE 50 16.138 0.291 -7.621 1.00 0.00 N ATOM 292 CA ILE 50 14.771 0.571 -7.287 1.00 0.00 C ATOM 293 CB ILE 50 14.470 0.512 -5.820 1.00 0.00 C ATOM 294 CG2 ILE 50 13.050 1.067 -5.595 1.00 0.00 C ATOM 295 CG1 ILE 50 14.663 -0.923 -5.311 1.00 0.00 C ATOM 296 CD1 ILE 50 14.673 -1.037 -3.792 1.00 0.00 C ATOM 297 C ILE 50 14.341 1.908 -7.772 1.00 0.00 C ATOM 298 O ILE 50 14.894 2.945 -7.411 1.00 0.00 O ATOM 299 N ASP 51 13.303 1.878 -8.625 1.00 0.00 N ATOM 300 CA ASP 51 12.671 3.040 -9.172 1.00 0.00 C ATOM 301 CB ASP 51 12.191 2.854 -10.621 1.00 0.00 C ATOM 302 CG ASP 51 13.409 2.882 -11.530 1.00 0.00 C ATOM 303 OD1 ASP 51 14.152 3.898 -11.494 1.00 0.00 O ATOM 304 OD2 ASP 51 13.616 1.881 -12.265 1.00 0.00 O ATOM 305 C ASP 51 11.460 3.313 -8.334 1.00 0.00 C ATOM 306 O ASP 51 11.385 2.890 -7.182 1.00 0.00 O ATOM 307 N SER 52 10.481 4.050 -8.898 1.00 0.00 N ATOM 308 CA SER 52 9.305 4.397 -8.153 1.00 0.00 C ATOM 309 CB SER 52 8.440 5.491 -8.807 1.00 0.00 C ATOM 310 OG SER 52 9.140 6.727 -8.813 1.00 0.00 O ATOM 311 C SER 52 8.444 3.192 -7.968 1.00 0.00 C ATOM 312 O SER 52 8.444 2.260 -8.772 1.00 0.00 O ATOM 313 N ILE 53 7.683 3.188 -6.857 1.00 0.00 N ATOM 314 CA ILE 53 6.816 2.100 -6.527 1.00 0.00 C ATOM 315 CB ILE 53 7.337 1.286 -5.385 1.00 0.00 C ATOM 316 CG2 ILE 53 6.298 0.206 -5.040 1.00 0.00 C ATOM 317 CG1 ILE 53 8.733 0.745 -5.731 1.00 0.00 C ATOM 318 CD1 ILE 53 8.763 -0.079 -7.015 1.00 0.00 C ATOM 319 C ILE 53 5.538 2.706 -6.049 1.00 0.00 C ATOM 320 O ILE 53 5.522 3.838 -5.567 1.00 0.00 O ATOM 321 N THR 54 4.418 1.975 -6.192 1.00 0.00 N ATOM 322 CA THR 54 3.181 2.496 -5.689 1.00 0.00 C ATOM 323 CB THR 54 2.195 2.852 -6.761 1.00 0.00 C ATOM 324 OG1 THR 54 1.821 1.685 -7.479 1.00 0.00 O ATOM 325 CG2 THR 54 2.834 3.882 -7.708 1.00 0.00 C ATOM 326 C THR 54 2.554 1.409 -4.883 1.00 0.00 C ATOM 327 O THR 54 2.774 0.229 -5.155 1.00 0.00 O ATOM 328 N VAL 55 1.780 1.774 -3.837 1.00 0.00 N ATOM 329 CA VAL 55 1.110 0.745 -3.097 1.00 0.00 C ATOM 330 CB VAL 55 1.398 0.770 -1.618 1.00 0.00 C ATOM 331 CG1 VAL 55 2.876 0.395 -1.412 1.00 0.00 C ATOM 332 CG2 VAL 55 1.046 2.155 -1.044 1.00 0.00 C ATOM 333 C VAL 55 -0.369 0.880 -3.318 1.00 0.00 C ATOM 334 O VAL 55 -1.060 1.718 -2.739 1.00 0.00 O ATOM 335 N PRO 56 -0.836 0.063 -4.216 1.00 0.00 N ATOM 336 CA PRO 56 -2.248 0.047 -4.511 1.00 0.00 C ATOM 337 CD PRO 56 -0.043 -0.095 -5.426 1.00 0.00 C ATOM 338 CB PRO 56 -2.377 -0.253 -6.002 1.00 0.00 C ATOM 339 CG PRO 56 -1.015 0.139 -6.587 1.00 0.00 C ATOM 340 C PRO 56 -2.962 -0.969 -3.679 1.00 0.00 C ATOM 341 O PRO 56 -2.301 -1.776 -3.023 1.00 0.00 O ATOM 342 N VAL 57 -4.312 -0.952 -3.692 1.00 0.00 N ATOM 343 CA VAL 57 -5.047 -1.949 -2.973 1.00 0.00 C ATOM 344 CB VAL 57 -5.705 -1.416 -1.736 1.00 0.00 C ATOM 345 CG1 VAL 57 -6.502 -2.551 -1.073 1.00 0.00 C ATOM 346 CG2 VAL 57 -4.617 -0.822 -0.828 1.00 0.00 C ATOM 347 C VAL 57 -6.122 -2.472 -3.872 1.00 0.00 C ATOM 348 O VAL 57 -6.818 -1.715 -4.550 1.00 0.00 O ATOM 349 N ASP 58 -6.278 -3.808 -3.893 1.00 0.00 N ATOM 350 CA ASP 58 -7.285 -4.430 -4.694 1.00 0.00 C ATOM 351 CB ASP 58 -6.870 -5.837 -5.162 1.00 0.00 C ATOM 352 CG ASP 58 -7.924 -6.322 -6.137 1.00 0.00 C ATOM 353 OD1 ASP 58 -8.552 -5.455 -6.796 1.00 0.00 O ATOM 354 OD2 ASP 58 -8.128 -7.563 -6.224 1.00 0.00 O ATOM 355 C ASP 58 -8.448 -4.608 -3.784 1.00 0.00 C ATOM 356 O ASP 58 -8.502 -5.578 -3.030 1.00 0.00 O ATOM 357 N ILE 59 -9.409 -3.665 -3.809 1.00 0.00 N ATOM 358 CA ILE 59 -10.519 -3.803 -2.915 1.00 0.00 C ATOM 359 CB ILE 59 -10.958 -2.456 -2.388 1.00 0.00 C ATOM 360 CG2 ILE 59 -12.199 -2.610 -1.490 1.00 0.00 C ATOM 361 CG1 ILE 59 -9.788 -1.786 -1.649 1.00 0.00 C ATOM 362 CD1 ILE 59 -9.366 -2.547 -0.394 1.00 0.00 C ATOM 363 C ILE 59 -11.608 -4.400 -3.737 1.00 0.00 C ATOM 364 O ILE 59 -12.712 -3.870 -3.847 1.00 0.00 O ATOM 365 N SER 60 -11.313 -5.566 -4.329 1.00 0.00 N ATOM 366 CA SER 60 -12.284 -6.195 -5.162 1.00 0.00 C ATOM 367 CB SER 60 -11.733 -7.462 -5.843 1.00 0.00 C ATOM 368 OG SER 60 -11.274 -8.383 -4.865 1.00 0.00 O ATOM 369 C SER 60 -13.443 -6.557 -4.307 1.00 0.00 C ATOM 370 O SER 60 -14.541 -6.032 -4.486 1.00 0.00 O ATOM 371 N GLN 61 -13.226 -7.446 -3.318 1.00 0.00 N ATOM 372 CA GLN 61 -14.339 -7.807 -2.496 1.00 0.00 C ATOM 373 CB GLN 61 -14.743 -9.286 -2.633 1.00 0.00 C ATOM 374 CG GLN 61 -15.185 -9.687 -4.043 1.00 0.00 C ATOM 375 CD GLN 61 -16.564 -9.100 -4.301 1.00 0.00 C ATOM 376 OE1 GLN 61 -17.408 -9.055 -3.408 1.00 0.00 O ATOM 377 NE2 GLN 61 -16.800 -8.637 -5.557 1.00 0.00 N ATOM 378 C GLN 61 -13.940 -7.630 -1.070 1.00 0.00 C ATOM 379 O GLN 61 -13.812 -8.613 -0.342 1.00 0.00 O ATOM 380 N VAL 62 -13.742 -6.383 -0.603 1.00 0.00 N ATOM 381 CA VAL 62 -13.457 -6.343 0.798 1.00 0.00 C ATOM 382 CB VAL 62 -12.167 -5.676 1.206 1.00 0.00 C ATOM 383 CG1 VAL 62 -11.007 -6.381 0.484 1.00 0.00 C ATOM 384 CG2 VAL 62 -12.255 -4.158 1.005 1.00 0.00 C ATOM 385 C VAL 62 -14.571 -5.614 1.453 1.00 0.00 C ATOM 386 O VAL 62 -14.963 -4.523 1.042 1.00 0.00 O ATOM 387 N THR 63 -15.181 -6.273 2.447 1.00 0.00 N ATOM 388 CA THR 63 -16.187 -5.640 3.234 1.00 0.00 C ATOM 389 CB THR 63 -16.941 -6.606 4.097 1.00 0.00 C ATOM 390 OG1 THR 63 -17.559 -7.599 3.293 1.00 0.00 O ATOM 391 CG2 THR 63 -18.003 -5.825 4.889 1.00 0.00 C ATOM 392 C THR 63 -15.491 -4.665 4.131 1.00 0.00 C ATOM 393 O THR 63 -15.964 -3.546 4.325 1.00 0.00 O ATOM 394 N GLU 64 -14.317 -5.066 4.675 1.00 0.00 N ATOM 395 CA GLU 64 -13.632 -4.258 5.651 1.00 0.00 C ATOM 396 CB GLU 64 -13.588 -4.873 7.066 1.00 0.00 C ATOM 397 CG GLU 64 -12.849 -6.213 7.144 1.00 0.00 C ATOM 398 CD GLU 64 -12.635 -6.581 8.610 1.00 0.00 C ATOM 399 OE1 GLU 64 -12.745 -5.678 9.481 1.00 0.00 O ATOM 400 OE2 GLU 64 -12.340 -7.778 8.873 1.00 0.00 O ATOM 401 C GLU 64 -12.203 -3.995 5.257 1.00 0.00 C ATOM 402 O GLU 64 -11.810 -4.143 4.099 1.00 0.00 O ATOM 403 N ASP 65 -11.415 -3.579 6.278 1.00 0.00 N ATOM 404 CA ASP 65 -10.041 -3.137 6.289 1.00 0.00 C ATOM 405 CB ASP 65 -9.566 -2.911 7.744 1.00 0.00 C ATOM 406 CG ASP 65 -8.225 -2.198 7.783 1.00 0.00 C ATOM 407 OD1 ASP 65 -7.282 -2.668 7.094 1.00 0.00 O ATOM 408 OD2 ASP 65 -8.125 -1.168 8.500 1.00 0.00 O ATOM 409 C ASP 65 -9.143 -4.158 5.661 1.00 0.00 C ATOM 410 O ASP 65 -9.290 -5.359 5.877 1.00 0.00 O ATOM 411 N THR 66 -8.177 -3.678 4.846 1.00 0.00 N ATOM 412 CA THR 66 -7.243 -4.544 4.182 1.00 0.00 C ATOM 413 CB THR 66 -7.503 -4.689 2.713 1.00 0.00 C ATOM 414 OG1 THR 66 -6.603 -5.634 2.154 1.00 0.00 O ATOM 415 CG2 THR 66 -7.308 -3.319 2.048 1.00 0.00 C ATOM 416 C THR 66 -5.883 -3.939 4.298 1.00 0.00 C ATOM 417 O THR 66 -5.737 -2.775 4.663 1.00 0.00 O ATOM 418 N SER 67 -4.838 -4.742 4.015 1.00 0.00 N ATOM 419 CA SER 67 -3.495 -4.243 4.055 1.00 0.00 C ATOM 420 CB SER 67 -2.433 -5.305 4.366 1.00 0.00 C ATOM 421 OG SER 67 -1.146 -4.708 4.346 1.00 0.00 O ATOM 422 C SER 67 -3.182 -3.732 2.694 1.00 0.00 C ATOM 423 O SER 67 -3.876 -4.055 1.733 1.00 0.00 O ATOM 424 N LYS 68 -2.134 -2.901 2.571 1.00 0.00 N ATOM 425 CA LYS 68 -1.807 -2.458 1.250 1.00 0.00 C ATOM 426 CB LYS 68 -1.144 -1.068 1.158 1.00 0.00 C ATOM 427 CG LYS 68 -2.076 0.114 1.438 1.00 0.00 C ATOM 428 CD LYS 68 -1.374 1.472 1.369 1.00 0.00 C ATOM 429 CE LYS 68 -2.189 2.642 1.914 1.00 0.00 C ATOM 430 NZ LYS 68 -1.289 3.787 2.178 1.00 0.00 N ATOM 431 C LYS 68 -0.846 -3.432 0.661 1.00 0.00 C ATOM 432 O LYS 68 0.042 -3.945 1.342 1.00 0.00 O ATOM 433 N THR 69 -1.022 -3.736 -0.637 1.00 0.00 N ATOM 434 CA THR 69 -0.093 -4.599 -1.288 1.00 0.00 C ATOM 435 CB THR 69 -0.682 -5.364 -2.436 1.00 0.00 C ATOM 436 OG1 THR 69 0.264 -6.285 -2.955 1.00 0.00 O ATOM 437 CG2 THR 69 -1.100 -4.360 -3.524 1.00 0.00 C ATOM 438 C THR 69 0.959 -3.714 -1.858 1.00 0.00 C ATOM 439 O THR 69 0.677 -2.603 -2.304 1.00 0.00 O ATOM 440 N LEU 70 2.217 -4.178 -1.834 1.00 0.00 N ATOM 441 CA LEU 70 3.246 -3.395 -2.439 1.00 0.00 C ATOM 442 CB LEU 70 4.581 -3.401 -1.678 1.00 0.00 C ATOM 443 CG LEU 70 4.523 -2.707 -0.306 1.00 0.00 C ATOM 444 CD1 LEU 70 3.591 -3.449 0.665 1.00 0.00 C ATOM 445 CD2 LEU 70 5.936 -2.498 0.260 1.00 0.00 C ATOM 446 C LEU 70 3.478 -4.019 -3.766 1.00 0.00 C ATOM 447 O LEU 70 3.389 -5.238 -3.906 1.00 0.00 O ATOM 448 N GLU 71 3.731 -3.192 -4.793 1.00 0.00 N ATOM 449 CA GLU 71 3.930 -3.781 -6.077 1.00 0.00 C ATOM 450 CB GLU 71 2.636 -3.884 -6.908 1.00 0.00 C ATOM 451 CG GLU 71 2.777 -4.711 -8.187 1.00 0.00 C ATOM 452 CD GLU 71 1.377 -4.991 -8.723 1.00 0.00 C ATOM 453 OE1 GLU 71 0.424 -5.010 -7.897 1.00 0.00 O ATOM 454 OE2 GLU 71 1.238 -5.197 -9.959 1.00 0.00 O ATOM 455 C GLU 71 4.910 -2.953 -6.832 1.00 0.00 C ATOM 456 O GLU 71 5.133 -1.780 -6.537 1.00 0.00 O ATOM 457 N LEU 72 5.517 -3.588 -7.848 1.00 0.00 N ATOM 458 CA LEU 72 6.480 -2.968 -8.694 1.00 0.00 C ATOM 459 CB LEU 72 6.014 -1.590 -9.198 1.00 0.00 C ATOM 460 CG LEU 72 4.761 -1.675 -10.092 1.00 0.00 C ATOM 461 CD1 LEU 72 4.387 -0.297 -10.658 1.00 0.00 C ATOM 462 CD2 LEU 72 4.924 -2.743 -11.187 1.00 0.00 C ATOM 463 C LEU 72 7.774 -2.826 -7.958 1.00 0.00 C ATOM 464 O LEU 72 8.760 -2.364 -8.529 1.00 0.00 O ATOM 465 N LYS 73 7.836 -3.254 -6.682 1.00 0.00 N ATOM 466 CA LYS 73 9.100 -3.163 -6.010 1.00 0.00 C ATOM 467 CB LYS 73 9.105 -2.304 -4.726 1.00 0.00 C ATOM 468 CG LYS 73 8.821 -3.052 -3.416 1.00 0.00 C ATOM 469 CD LYS 73 7.481 -3.782 -3.343 1.00 0.00 C ATOM 470 CE LYS 73 7.286 -4.522 -2.014 1.00 0.00 C ATOM 471 NZ LYS 73 8.400 -5.469 -1.792 1.00 0.00 N ATOM 472 C LYS 73 9.460 -4.549 -5.600 1.00 0.00 C ATOM 473 O LYS 73 8.585 -5.363 -5.309 1.00 0.00 O ATOM 474 N ALA 74 10.766 -4.871 -5.586 1.00 0.00 N ATOM 475 CA ALA 74 11.153 -6.200 -5.211 1.00 0.00 C ATOM 476 CB ALA 74 12.638 -6.510 -5.474 1.00 0.00 C ATOM 477 C ALA 74 10.906 -6.374 -3.742 1.00 0.00 C ATOM 478 O ALA 74 11.243 -5.515 -2.931 1.00 0.00 O ATOM 479 N GLU 75 10.293 -7.516 -3.386 1.00 0.00 N ATOM 480 CA GLU 75 9.957 -7.913 -2.045 1.00 0.00 C ATOM 481 CB GLU 75 9.008 -9.124 -1.991 1.00 0.00 C ATOM 482 CG GLU 75 8.682 -9.567 -0.563 1.00 0.00 C ATOM 483 CD GLU 75 7.751 -10.770 -0.622 1.00 0.00 C ATOM 484 OE1 GLU 75 7.330 -11.145 -1.749 1.00 0.00 O ATOM 485 OE2 GLU 75 7.451 -11.334 0.464 1.00 0.00 O ATOM 486 C GLU 75 11.182 -8.308 -1.279 1.00 0.00 C ATOM 487 O GLU 75 11.175 -8.290 -0.050 1.00 0.00 O ATOM 488 N GLY 76 12.255 -8.702 -1.988 1.00 0.00 N ATOM 489 CA GLY 76 13.431 -9.283 -1.391 1.00 0.00 C ATOM 490 C GLY 76 14.055 -8.383 -0.368 1.00 0.00 C ATOM 491 O GLY 76 14.548 -8.865 0.651 1.00 0.00 O ATOM 492 N VAL 77 14.083 -7.063 -0.616 1.00 0.00 N ATOM 493 CA VAL 77 14.667 -6.133 0.311 1.00 0.00 C ATOM 494 CB VAL 77 14.594 -4.719 -0.203 1.00 0.00 C ATOM 495 CG1 VAL 77 15.061 -3.744 0.889 1.00 0.00 C ATOM 496 CG2 VAL 77 15.401 -4.632 -1.511 1.00 0.00 C ATOM 497 C VAL 77 13.881 -6.214 1.582 1.00 0.00 C ATOM 498 O VAL 77 12.744 -6.680 1.585 1.00 0.00 O ATOM 499 N THR 78 14.484 -5.811 2.721 1.00 0.00 N ATOM 500 CA THR 78 13.732 -5.853 3.938 1.00 0.00 C ATOM 501 CB THR 78 14.594 -5.895 5.168 1.00 0.00 C ATOM 502 OG1 THR 78 15.397 -4.727 5.255 1.00 0.00 O ATOM 503 CG2 THR 78 15.492 -7.142 5.091 1.00 0.00 C ATOM 504 C THR 78 12.926 -4.593 3.951 1.00 0.00 C ATOM 505 O THR 78 13.464 -3.494 4.071 1.00 0.00 O ATOM 506 N VAL 79 11.593 -4.729 3.807 1.00 0.00 N ATOM 507 CA VAL 79 10.766 -3.566 3.711 1.00 0.00 C ATOM 508 CB VAL 79 9.831 -3.597 2.538 1.00 0.00 C ATOM 509 CG1 VAL 79 10.650 -3.491 1.244 1.00 0.00 C ATOM 510 CG2 VAL 79 9.015 -4.896 2.621 1.00 0.00 C ATOM 511 C VAL 79 9.935 -3.447 4.935 1.00 0.00 C ATOM 512 O VAL 79 9.255 -4.388 5.340 1.00 0.00 O ATOM 513 N GLN 80 9.984 -2.264 5.573 1.00 0.00 N ATOM 514 CA GLN 80 9.153 -2.052 6.712 1.00 0.00 C ATOM 515 CB GLN 80 9.932 -1.671 7.985 1.00 0.00 C ATOM 516 CG GLN 80 10.794 -2.806 8.552 1.00 0.00 C ATOM 517 CD GLN 80 12.051 -2.951 7.706 1.00 0.00 C ATOM 518 OE1 GLN 80 12.363 -2.101 6.874 1.00 0.00 O ATOM 519 NE2 GLN 80 12.803 -4.061 7.931 1.00 0.00 N ATOM 520 C GLN 80 8.255 -0.915 6.353 1.00 0.00 C ATOM 521 O GLN 80 8.704 0.211 6.146 1.00 0.00 O ATOM 522 N PRO 81 6.994 -1.225 6.198 1.00 0.00 N ATOM 523 CA PRO 81 6.050 -0.196 5.854 1.00 0.00 C ATOM 524 CD PRO 81 6.655 -2.490 5.569 1.00 0.00 C ATOM 525 CB PRO 81 5.020 -0.839 4.928 1.00 0.00 C ATOM 526 CG PRO 81 5.181 -2.348 5.167 1.00 0.00 C ATOM 527 C PRO 81 5.399 0.503 7.003 1.00 0.00 C ATOM 528 O PRO 81 5.136 -0.125 8.029 1.00 0.00 O ATOM 529 N SER 82 5.156 1.816 6.833 1.00 0.00 N ATOM 530 CA SER 82 4.372 2.632 7.711 1.00 0.00 C ATOM 531 CB SER 82 4.716 4.123 7.597 1.00 0.00 C ATOM 532 OG SER 82 6.063 4.339 7.987 1.00 0.00 O ATOM 533 C SER 82 2.959 2.473 7.249 1.00 0.00 C ATOM 534 O SER 82 2.026 3.007 7.841 1.00 0.00 O ATOM 535 N THR 83 2.786 1.773 6.117 1.00 0.00 N ATOM 536 CA THR 83 1.510 1.603 5.491 1.00 0.00 C ATOM 537 CB THR 83 1.619 0.827 4.218 1.00 0.00 C ATOM 538 OG1 THR 83 2.423 1.521 3.275 1.00 0.00 O ATOM 539 CG2 THR 83 0.201 0.589 3.686 1.00 0.00 C ATOM 540 C THR 83 0.575 0.855 6.354 1.00 0.00 C ATOM 541 O THR 83 -0.534 1.322 6.598 1.00 0.00 O ATOM 542 N VAL 84 1.004 -0.326 6.834 1.00 0.00 N ATOM 543 CA VAL 84 0.198 -1.157 7.670 1.00 0.00 C ATOM 544 CB VAL 84 0.073 -0.681 9.102 1.00 0.00 C ATOM 545 CG1 VAL 84 -0.910 0.495 9.176 1.00 0.00 C ATOM 546 CG2 VAL 84 -0.307 -1.867 10.005 1.00 0.00 C ATOM 547 C VAL 84 -1.151 -1.322 7.047 1.00 0.00 C ATOM 548 O VAL 84 -1.366 -1.027 5.871 1.00 0.00 O ATOM 549 N LYS 85 -2.095 -1.875 7.823 1.00 0.00 N ATOM 550 CA LYS 85 -3.407 -2.056 7.298 1.00 0.00 C ATOM 551 CB LYS 85 -4.352 -2.806 8.249 1.00 0.00 C ATOM 552 CG LYS 85 -4.024 -4.296 8.365 1.00 0.00 C ATOM 553 CD LYS 85 -4.251 -5.099 7.077 1.00 0.00 C ATOM 554 CE LYS 85 -5.626 -5.776 7.040 1.00 0.00 C ATOM 555 NZ LYS 85 -5.764 -6.628 5.836 1.00 0.00 N ATOM 556 C LYS 85 -3.956 -0.699 7.042 1.00 0.00 C ATOM 557 O LYS 85 -3.582 0.277 7.690 1.00 0.00 O ATOM 558 N VAL 86 -4.845 -0.606 6.044 1.00 0.00 N ATOM 559 CA VAL 86 -5.378 0.667 5.690 1.00 0.00 C ATOM 560 CB VAL 86 -5.184 0.988 4.240 1.00 0.00 C ATOM 561 CG1 VAL 86 -5.994 2.248 3.908 1.00 0.00 C ATOM 562 CG2 VAL 86 -3.674 1.117 3.964 1.00 0.00 C ATOM 563 C VAL 86 -6.836 0.600 5.938 1.00 0.00 C ATOM 564 O VAL 86 -7.450 -0.460 5.829 1.00 0.00 O ATOM 565 N ASN 87 -7.431 1.751 6.293 1.00 0.00 N ATOM 566 CA ASN 87 -8.828 1.762 6.568 1.00 0.00 C ATOM 567 CB ASN 87 -9.180 2.578 7.819 1.00 0.00 C ATOM 568 CG ASN 87 -8.664 3.989 7.599 1.00 0.00 C ATOM 569 OD1 ASN 87 -7.488 4.177 7.289 1.00 0.00 O ATOM 570 ND2 ASN 87 -9.554 5.007 7.760 1.00 0.00 N ATOM 571 C ASN 87 -9.524 2.372 5.404 1.00 0.00 C ATOM 572 O ASN 87 -9.171 3.452 4.932 1.00 0.00 O ATOM 573 N LEU 88 -10.530 1.651 4.888 1.00 0.00 N ATOM 574 CA LEU 88 -11.305 2.158 3.803 1.00 0.00 C ATOM 575 CB LEU 88 -11.116 1.377 2.494 1.00 0.00 C ATOM 576 CG LEU 88 -9.645 1.222 2.076 1.00 0.00 C ATOM 577 CD1 LEU 88 -8.959 2.591 1.947 1.00 0.00 C ATOM 578 CD2 LEU 88 -8.898 0.236 2.991 1.00 0.00 C ATOM 579 C LEU 88 -12.716 1.918 4.209 1.00 0.00 C ATOM 580 O LEU 88 -13.042 0.828 4.678 1.00 0.00 O ATOM 581 N LYS 89 -13.595 2.924 4.064 1.00 0.00 N ATOM 582 CA LYS 89 -14.963 2.674 4.408 1.00 0.00 C ATOM 583 CB LYS 89 -15.696 3.918 4.947 1.00 0.00 C ATOM 584 CG LYS 89 -17.115 3.673 5.479 1.00 0.00 C ATOM 585 CD LYS 89 -17.189 2.975 6.842 1.00 0.00 C ATOM 586 CE LYS 89 -18.621 2.845 7.376 1.00 0.00 C ATOM 587 NZ LYS 89 -18.618 2.190 8.704 1.00 0.00 N ATOM 588 C LYS 89 -15.614 2.269 3.131 1.00 0.00 C ATOM 589 O LYS 89 -15.569 2.999 2.142 1.00 0.00 O ATOM 590 N VAL 90 -16.228 1.072 3.112 1.00 0.00 N ATOM 591 CA VAL 90 -16.808 0.612 1.891 1.00 0.00 C ATOM 592 CB VAL 90 -16.250 -0.713 1.471 1.00 0.00 C ATOM 593 CG1 VAL 90 -17.063 -1.233 0.283 1.00 0.00 C ATOM 594 CG2 VAL 90 -14.744 -0.548 1.195 1.00 0.00 C ATOM 595 C VAL 90 -18.272 0.424 2.097 1.00 0.00 C ATOM 596 O VAL 90 -18.698 -0.284 3.006 1.00 0.00 O ATOM 597 N THR 91 -19.089 1.081 1.252 1.00 0.00 N ATOM 598 CA THR 91 -20.506 0.884 1.317 1.00 0.00 C ATOM 599 CB THR 91 -21.240 1.913 2.132 1.00 0.00 C ATOM 600 OG1 THR 91 -22.599 1.535 2.302 1.00 0.00 O ATOM 601 CG2 THR 91 -21.157 3.262 1.403 1.00 0.00 C ATOM 602 C THR 91 -21.015 1.033 -0.075 1.00 0.00 C ATOM 603 O THR 91 -20.347 1.629 -0.917 1.00 0.00 O ATOM 604 N GLN 92 -22.205 0.471 -0.364 1.00 0.00 N ATOM 605 CA GLN 92 -22.775 0.669 -1.667 1.00 0.00 C ATOM 606 CB GLN 92 -23.962 -0.271 -1.965 1.00 0.00 C ATOM 607 CG GLN 92 -24.602 -0.095 -3.347 1.00 0.00 C ATOM 608 CD GLN 92 -25.738 -1.104 -3.451 1.00 0.00 C ATOM 609 OE1 GLN 92 -25.581 -2.157 -4.065 1.00 0.00 O ATOM 610 NE2 GLN 92 -26.906 -0.793 -2.822 1.00 0.00 N ATOM 611 C GLN 92 -23.278 2.074 -1.649 1.00 0.00 C ATOM 612 O GLN 92 -24.048 2.442 -0.764 1.00 0.00 O ATOM 613 N LYS 93 -22.850 2.910 -2.614 1.00 0.00 N ATOM 614 CA LYS 93 -23.287 4.274 -2.569 1.00 0.00 C ATOM 615 CB LYS 93 -22.194 5.307 -2.923 1.00 0.00 C ATOM 616 CG LYS 93 -21.733 5.305 -4.380 1.00 0.00 C ATOM 617 CD LYS 93 -21.158 3.969 -4.839 1.00 0.00 C ATOM 618 CE LYS 93 -20.354 4.065 -6.137 1.00 0.00 C ATOM 619 NZ LYS 93 -18.952 4.423 -5.829 1.00 0.00 N ATOM 620 C LYS 93 -24.442 4.456 -3.548 1.00 0.00 C ATOM 621 O LYS 93 -24.986 3.423 -4.023 1.00 0.00 O ATOM 622 OXT LYS 93 -24.801 5.631 -3.826 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 621 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 61.81 62.8 164 96.5 170 ARMSMC SECONDARY STRUCTURE . . 50.62 67.3 101 95.3 106 ARMSMC SURFACE . . . . . . . . 59.16 61.8 110 94.8 116 ARMSMC BURIED . . . . . . . . 66.89 64.8 54 100.0 54 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.75 34.2 76 96.2 79 ARMSSC1 RELIABLE SIDE CHAINS . 93.39 34.9 63 95.5 66 ARMSSC1 SECONDARY STRUCTURE . . 93.70 34.7 49 96.1 51 ARMSSC1 SURFACE . . . . . . . . 98.31 26.4 53 94.6 56 ARMSSC1 BURIED . . . . . . . . 85.98 52.2 23 100.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.09 44.2 43 95.6 45 ARMSSC2 RELIABLE SIDE CHAINS . 77.23 42.9 35 97.2 36 ARMSSC2 SECONDARY STRUCTURE . . 79.49 44.0 25 96.2 26 ARMSSC2 SURFACE . . . . . . . . 78.20 39.4 33 94.3 35 ARMSSC2 BURIED . . . . . . . . 77.75 60.0 10 100.0 10 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 63.53 57.9 19 95.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 69.86 60.0 15 93.8 16 ARMSSC3 SECONDARY STRUCTURE . . 71.10 50.0 12 92.3 13 ARMSSC3 SURFACE . . . . . . . . 58.98 61.1 18 94.7 19 ARMSSC3 BURIED . . . . . . . . 118.62 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.86 55.6 9 90.0 10 ARMSSC4 RELIABLE SIDE CHAINS . 75.86 55.6 9 90.0 10 ARMSSC4 SECONDARY STRUCTURE . . 65.43 60.0 5 83.3 6 ARMSSC4 SURFACE . . . . . . . . 75.86 55.6 9 90.0 10 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.30 (Number of atoms: 83) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.30 83 96.5 86 CRMSCA CRN = ALL/NP . . . . . 0.0518 CRMSCA SECONDARY STRUCTURE . . 4.25 51 96.2 53 CRMSCA SURFACE . . . . . . . . 4.40 56 94.9 59 CRMSCA BURIED . . . . . . . . 4.10 27 100.0 27 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.42 411 96.5 426 CRMSMC SECONDARY STRUCTURE . . 4.34 254 96.2 264 CRMSMC SURFACE . . . . . . . . 4.47 277 94.9 292 CRMSMC BURIED . . . . . . . . 4.30 134 100.0 134 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.35 289 29.8 971 CRMSSC RELIABLE SIDE CHAINS . 6.51 237 25.8 917 CRMSSC SECONDARY STRUCTURE . . 5.90 184 29.4 625 CRMSSC SURFACE . . . . . . . . 6.68 208 32.0 651 CRMSSC BURIED . . . . . . . . 5.39 81 25.3 320 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.33 621 47.2 1315 CRMSALL SECONDARY STRUCTURE . . 5.08 388 46.4 837 CRMSALL SURFACE . . . . . . . . 5.57 432 48.7 887 CRMSALL BURIED . . . . . . . . 4.74 189 44.2 428 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.778 1.000 0.500 83 96.5 86 ERRCA SECONDARY STRUCTURE . . 3.728 1.000 0.500 51 96.2 53 ERRCA SURFACE . . . . . . . . 3.942 1.000 0.500 56 94.9 59 ERRCA BURIED . . . . . . . . 3.438 1.000 0.500 27 100.0 27 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.865 1.000 0.500 411 96.5 426 ERRMC SECONDARY STRUCTURE . . 3.805 1.000 0.500 254 96.2 264 ERRMC SURFACE . . . . . . . . 3.993 1.000 0.500 277 94.9 292 ERRMC BURIED . . . . . . . . 3.600 1.000 0.500 134 100.0 134 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.544 1.000 0.500 289 29.8 971 ERRSC RELIABLE SIDE CHAINS . 5.697 1.000 0.500 237 25.8 917 ERRSC SECONDARY STRUCTURE . . 5.100 1.000 0.500 184 29.4 625 ERRSC SURFACE . . . . . . . . 5.931 1.000 0.500 208 32.0 651 ERRSC BURIED . . . . . . . . 4.548 1.000 0.500 81 25.3 320 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.566 1.000 0.500 621 47.2 1315 ERRALL SECONDARY STRUCTURE . . 4.362 1.000 0.500 388 46.4 837 ERRALL SURFACE . . . . . . . . 4.837 1.000 0.500 432 48.7 887 ERRALL BURIED . . . . . . . . 3.945 1.000 0.500 189 44.2 428 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 4 18 35 59 83 83 86 DISTCA CA (P) 4.65 20.93 40.70 68.60 96.51 86 DISTCA CA (RMS) 0.78 1.42 2.04 2.94 4.30 DISTCA ALL (N) 14 102 220 386 592 621 1315 DISTALL ALL (P) 1.06 7.76 16.73 29.35 45.02 1315 DISTALL ALL (RMS) 0.79 1.50 2.12 3.03 4.76 DISTALL END of the results output