####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 86 ( 645), selected 86 , name T0572TS245_1-D1 # Molecule2: number of CA atoms 86 ( 1315), selected 86 , name T0572-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0572TS245_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 86 8 - 93 4.76 4.76 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 64 - 90 1.97 6.51 LONGEST_CONTINUOUS_SEGMENT: 27 65 - 91 1.94 6.25 LCS_AVERAGE: 19.89 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 75 - 88 0.99 7.11 LONGEST_CONTINUOUS_SEGMENT: 14 76 - 89 0.95 7.37 LCS_AVERAGE: 10.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 86 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 8 L 8 7 12 86 5 5 7 9 12 33 35 43 46 55 62 64 75 82 84 85 86 86 86 86 LCS_GDT S 9 S 9 7 12 86 5 10 17 25 30 33 41 51 54 60 65 73 79 82 84 85 86 86 86 86 LCS_GDT K 10 K 10 7 12 86 5 6 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT S 11 S 11 8 12 86 5 7 16 24 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 12 V 12 8 12 86 5 9 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT P 13 P 13 8 12 86 3 9 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 14 V 14 8 12 86 3 11 19 24 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT K 15 K 15 8 12 86 4 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT L 16 L 16 8 12 86 4 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT E 17 E 17 8 12 86 4 10 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT L 18 L 18 8 12 86 4 10 17 24 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 19 T 19 4 12 86 3 4 10 15 24 31 38 43 52 58 63 73 79 82 84 85 86 86 86 86 LCS_GDT G 20 G 20 4 10 86 3 4 6 9 17 24 34 36 44 53 58 68 74 81 84 85 86 86 86 86 LCS_GDT D 21 D 21 4 7 86 1 3 5 7 8 17 20 28 39 47 57 65 71 78 83 85 86 86 86 86 LCS_GDT K 22 K 22 4 7 86 2 3 5 12 13 18 34 36 44 53 58 68 72 79 84 85 86 86 86 86 LCS_GDT A 23 A 23 4 7 86 0 3 4 6 12 17 27 36 46 57 63 70 78 81 84 85 86 86 86 86 LCS_GDT S 24 S 24 5 7 86 3 4 11 14 17 21 23 44 54 58 65 73 79 82 84 85 86 86 86 86 LCS_GDT N 25 N 25 5 7 86 3 4 5 11 15 21 22 26 43 58 66 72 76 82 83 85 86 86 86 86 LCS_GDT V 26 V 26 5 7 86 3 4 13 15 17 21 22 39 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT S 27 S 27 5 7 86 2 4 5 10 12 21 22 24 36 48 60 72 79 82 84 85 86 86 86 86 LCS_GDT S 28 S 28 5 7 86 0 7 9 11 16 21 22 24 36 48 60 70 79 82 84 85 86 86 86 86 LCS_GDT I 29 I 29 4 7 86 4 4 15 19 21 29 36 41 47 57 63 71 79 82 84 85 86 86 86 86 LCS_GDT S 30 S 30 4 8 86 4 10 15 19 21 29 32 41 49 57 63 72 79 82 84 85 86 86 86 86 LCS_GDT Y 31 Y 31 4 8 86 4 9 15 19 21 29 38 44 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT S 32 S 32 4 8 86 4 7 13 18 21 27 36 44 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT F 33 F 33 4 8 86 3 6 12 19 23 32 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT D 34 D 34 4 8 86 3 4 6 18 20 33 35 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT R 35 R 35 4 17 86 3 5 14 18 27 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT G 36 G 36 10 17 86 4 8 15 19 21 29 38 45 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT H 37 H 37 10 17 86 4 6 11 15 18 29 36 44 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 38 V 38 12 17 86 4 10 15 19 23 32 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 39 T 39 12 17 86 4 8 15 19 23 32 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT I 40 I 40 12 17 86 5 11 15 22 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 41 V 41 12 17 86 5 11 15 23 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT G 42 G 42 12 17 86 4 11 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT S 43 S 43 12 17 86 6 11 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT Q 44 Q 44 12 17 86 6 11 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT E 45 E 45 12 17 86 6 11 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT A 46 A 46 12 17 86 6 11 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT M 47 M 47 12 17 86 6 11 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT D 48 D 48 12 17 86 6 11 16 25 30 33 39 51 52 60 65 73 79 82 84 85 86 86 86 86 LCS_GDT K 49 K 49 12 17 86 6 11 17 25 30 33 41 51 54 60 65 73 79 82 84 85 86 86 86 86 LCS_GDT I 50 I 50 12 17 86 5 11 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT D 51 D 51 12 17 86 3 9 16 20 27 33 38 43 51 56 64 72 79 82 84 85 86 86 86 86 LCS_GDT S 52 S 52 5 15 86 3 4 6 12 15 22 28 43 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT I 53 I 53 5 14 86 3 4 8 12 15 25 33 43 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 54 T 54 10 13 86 4 7 13 15 17 21 32 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 55 V 55 10 13 86 4 9 13 15 17 21 32 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT P 56 P 56 10 13 86 7 9 13 15 17 21 32 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 57 V 57 10 13 86 7 9 13 15 17 21 32 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT D 58 D 58 10 13 86 7 9 13 15 17 21 32 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT I 59 I 59 10 13 86 5 9 13 15 17 21 29 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT S 60 S 60 10 13 86 7 9 13 15 17 21 32 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT Q 61 Q 61 10 13 86 7 9 13 15 17 21 32 44 54 58 66 72 78 82 84 85 86 86 86 86 LCS_GDT V 62 V 62 10 13 86 7 9 13 15 17 21 32 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 63 T 63 10 13 86 7 9 13 15 17 21 28 39 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT E 64 E 64 10 27 86 2 5 10 14 17 30 38 44 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT D 65 D 65 10 27 86 2 6 10 13 16 21 35 44 54 58 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 66 T 66 8 27 86 4 6 11 21 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT S 67 S 67 8 27 86 4 10 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT K 68 K 68 9 27 86 5 10 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 69 T 69 9 27 86 5 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT L 70 L 70 9 27 86 5 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT E 71 E 71 9 27 86 4 10 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT L 72 L 72 9 27 86 5 10 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT K 73 K 73 9 27 86 4 10 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT A 74 A 74 9 27 86 4 10 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT E 75 E 75 14 27 86 4 10 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT G 76 G 76 14 27 86 3 9 17 25 30 33 41 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 77 V 77 14 27 86 3 9 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 78 T 78 14 27 86 3 11 19 25 30 33 40 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 79 V 79 14 27 86 3 9 19 25 30 33 39 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT Q 80 Q 80 14 27 86 3 9 15 23 29 33 39 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT P 81 P 81 14 27 86 3 9 17 24 30 33 41 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT S 82 S 82 14 27 86 3 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 83 T 83 14 27 86 3 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 84 V 84 14 27 86 3 9 17 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT K 85 K 85 14 27 86 4 10 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 86 V 86 14 27 86 4 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT N 87 N 87 14 27 86 4 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT L 88 L 88 14 27 86 4 10 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT K 89 K 89 14 27 86 3 8 16 25 30 33 39 48 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT V 90 V 90 9 27 86 3 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT T 91 T 91 4 27 86 3 3 14 22 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT Q 92 Q 92 4 5 86 3 4 11 17 25 32 43 51 54 60 66 73 79 82 84 85 86 86 86 86 LCS_GDT K 93 K 93 4 5 86 0 3 3 14 21 27 36 41 47 55 63 71 79 82 84 85 86 86 86 86 LCS_AVERAGE LCS_A: 43.51 ( 10.63 19.89 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 11 19 25 30 33 43 51 54 60 66 73 79 82 84 85 86 86 86 86 GDT PERCENT_AT 8.14 12.79 22.09 29.07 34.88 38.37 50.00 59.30 62.79 69.77 76.74 84.88 91.86 95.35 97.67 98.84 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.30 0.67 0.99 1.31 1.52 1.69 2.52 2.81 3.01 3.27 3.89 4.06 4.36 4.50 4.63 4.68 4.76 4.76 4.76 4.76 GDT RMS_ALL_AT 8.66 7.14 6.41 6.82 6.92 7.00 5.15 5.40 5.47 5.23 5.08 4.91 4.84 4.84 4.77 4.77 4.76 4.76 4.76 4.76 # Checking swapping # possible swapping detected: D 21 D 21 # possible swapping detected: Y 31 Y 31 # possible swapping detected: F 33 F 33 # possible swapping detected: D 34 D 34 # possible swapping detected: E 45 E 45 # possible swapping detected: D 65 D 65 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 8 L 8 5.718 0 0.080 1.321 7.891 27.857 23.571 LGA S 9 S 9 3.591 0 0.116 0.153 4.508 40.476 40.397 LGA K 10 K 10 1.678 0 0.019 0.864 8.931 79.405 48.730 LGA S 11 S 11 1.514 0 0.149 0.534 2.472 72.976 71.587 LGA V 12 V 12 3.536 0 0.105 0.928 5.747 42.024 40.544 LGA P 13 P 13 3.182 0 0.133 0.117 3.503 48.333 53.197 LGA V 14 V 14 3.742 0 0.087 1.164 3.954 46.667 45.238 LGA K 15 K 15 3.146 0 0.104 0.764 3.366 51.786 56.508 LGA L 16 L 16 2.367 0 0.051 1.063 4.384 60.952 58.452 LGA E 17 E 17 2.673 0 0.030 0.098 3.831 59.048 54.074 LGA L 18 L 18 3.327 0 0.171 0.214 4.724 42.143 46.250 LGA T 19 T 19 6.336 0 0.056 0.070 8.054 14.405 14.558 LGA G 20 G 20 10.372 0 0.319 0.319 10.663 0.833 0.833 LGA D 21 D 21 13.353 0 0.569 1.205 17.438 0.000 0.000 LGA K 22 K 22 11.329 0 0.569 1.090 12.043 0.000 0.741 LGA A 23 A 23 10.038 0 0.117 0.138 10.228 1.905 1.619 LGA S 24 S 24 8.871 0 0.529 0.735 11.603 4.048 2.698 LGA N 25 N 25 9.119 0 0.291 0.985 11.125 5.357 2.738 LGA V 26 V 26 6.812 0 0.186 1.135 7.955 9.405 11.905 LGA S 27 S 27 8.700 0 0.637 0.593 9.960 3.333 3.254 LGA S 28 S 28 8.945 0 0.146 0.212 10.661 5.000 3.333 LGA I 29 I 29 7.478 0 0.577 0.999 11.203 6.429 5.298 LGA S 30 S 30 7.403 0 0.027 0.631 8.623 14.643 11.032 LGA Y 31 Y 31 5.379 0 0.069 0.139 9.044 18.690 15.952 LGA S 32 S 32 6.045 0 0.056 0.698 10.207 28.214 20.000 LGA F 33 F 33 3.895 0 0.059 1.174 8.770 43.810 24.286 LGA D 34 D 34 4.758 0 0.043 1.088 9.807 36.190 20.119 LGA R 35 R 35 2.663 0 0.593 1.140 13.071 53.571 28.355 LGA G 36 G 36 5.031 0 0.609 0.609 5.912 27.738 27.738 LGA H 37 H 37 5.485 0 0.029 0.858 10.934 30.238 14.429 LGA V 38 V 38 3.670 0 0.065 1.033 4.245 41.786 45.374 LGA T 39 T 39 3.420 0 0.082 1.073 5.852 46.667 45.170 LGA I 40 I 40 2.140 0 0.178 1.205 4.206 62.857 64.583 LGA V 41 V 41 2.251 0 0.089 0.095 3.171 66.786 60.612 LGA G 42 G 42 2.029 0 0.117 0.117 2.183 64.762 64.762 LGA S 43 S 43 1.966 0 0.073 0.106 2.260 70.833 68.810 LGA Q 44 Q 44 2.514 0 0.040 1.098 7.446 60.952 46.190 LGA E 45 E 45 2.254 0 0.029 1.178 4.816 64.762 51.217 LGA A 46 A 46 1.754 0 0.055 0.056 2.236 68.810 71.333 LGA M 47 M 47 2.501 0 0.051 1.323 7.861 55.476 43.690 LGA D 48 D 48 3.922 0 0.082 1.140 8.291 43.452 31.250 LGA K 49 K 49 3.610 0 0.055 1.470 5.589 46.667 43.333 LGA I 50 I 50 2.676 0 0.152 0.129 4.913 47.262 59.286 LGA D 51 D 51 5.345 0 0.144 0.125 6.951 24.524 23.214 LGA S 52 S 52 5.341 0 0.177 0.237 6.518 31.548 26.825 LGA I 53 I 53 5.272 0 0.156 1.405 7.278 19.881 27.202 LGA T 54 T 54 8.021 0 0.326 1.083 9.911 8.095 5.102 LGA V 55 V 55 7.534 0 0.071 0.098 7.805 7.143 8.844 LGA P 56 P 56 7.978 0 0.098 0.402 9.516 7.143 5.238 LGA V 57 V 57 7.176 0 0.075 1.187 7.758 8.571 9.796 LGA D 58 D 58 8.370 0 0.148 0.908 9.326 6.548 5.298 LGA I 59 I 59 7.410 0 0.109 1.555 9.821 7.857 10.238 LGA S 60 S 60 8.559 0 0.017 0.630 9.264 3.333 2.937 LGA Q 61 Q 61 9.106 0 0.159 0.653 10.422 2.976 1.587 LGA V 62 V 62 7.409 0 0.112 0.152 7.877 9.286 11.565 LGA T 63 T 63 7.590 0 0.681 1.336 9.232 5.714 7.619 LGA E 64 E 64 5.792 0 0.073 1.096 7.289 21.429 18.413 LGA D 65 D 65 6.821 0 0.096 1.259 12.445 26.310 13.333 LGA T 66 T 66 3.141 0 0.532 1.221 5.135 47.143 44.966 LGA S 67 S 67 2.147 0 0.050 0.626 2.871 64.881 63.571 LGA K 68 K 68 1.845 0 0.058 1.105 3.301 77.143 66.243 LGA T 69 T 69 2.044 0 0.028 1.063 3.804 66.786 60.748 LGA L 70 L 70 1.494 0 0.141 0.225 2.603 79.286 71.131 LGA E 71 E 71 1.839 0 0.076 0.279 2.372 72.857 71.058 LGA L 72 L 72 1.700 0 0.103 1.425 5.357 77.143 57.857 LGA K 73 K 73 1.117 0 0.131 0.747 2.299 77.262 76.772 LGA A 74 A 74 1.503 0 0.105 0.120 1.919 81.548 79.810 LGA E 75 E 75 2.330 0 0.583 0.660 5.546 50.238 43.386 LGA G 76 G 76 3.528 0 0.688 0.688 3.780 50.357 50.357 LGA V 77 V 77 3.209 0 0.102 1.220 6.025 45.119 41.565 LGA T 78 T 78 3.624 0 0.236 1.158 6.467 50.119 42.585 LGA V 79 V 79 3.704 0 0.035 0.141 4.437 40.238 41.565 LGA Q 80 Q 80 3.938 0 0.193 1.307 8.145 46.667 30.317 LGA P 81 P 81 3.380 0 0.530 0.436 4.826 45.357 49.388 LGA S 82 S 82 2.444 0 0.298 0.414 2.810 60.952 59.683 LGA T 83 T 83 2.466 0 0.075 1.157 5.176 60.952 52.925 LGA V 84 V 84 2.242 0 0.055 1.027 4.389 64.762 63.401 LGA K 85 K 85 2.063 0 0.082 0.891 3.355 64.762 64.921 LGA V 86 V 86 2.011 0 0.058 0.984 3.454 62.857 61.633 LGA N 87 N 87 3.335 0 0.049 0.999 7.269 51.786 36.369 LGA L 88 L 88 3.126 0 0.084 0.895 4.275 45.119 53.571 LGA K 89 K 89 4.887 0 0.189 0.846 5.781 40.476 35.926 LGA V 90 V 90 2.984 0 0.070 0.082 4.426 57.500 53.469 LGA T 91 T 91 2.193 0 0.129 1.060 3.478 72.976 69.728 LGA Q 92 Q 92 4.006 0 0.207 1.006 6.915 31.429 32.698 LGA K 93 K 93 8.822 0 0.461 1.300 11.578 3.214 1.640 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 86 344 344 100.00 644 644 100.00 86 SUMMARY(RMSD_GDC): 4.762 4.744 5.377 39.486 36.018 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 86 86 4.0 51 2.81 50.000 44.227 1.755 LGA_LOCAL RMSD: 2.807 Number of atoms: 51 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.396 Number of assigned atoms: 86 Std_ASGN_ATOMS RMSD: 4.762 Standard rmsd on all 86 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.062352 * X + -0.994433 * Y + 0.084937 * Z + 5.370583 Y_new = -0.991381 * X + 0.071535 * Y + 0.109753 * Z + 7.986637 Z_new = -0.115218 * X + -0.077362 * Y + -0.990323 * Z + 3.294489 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.633608 0.115475 -3.063633 [DEG: -93.5988 6.6162 -175.5333 ] ZXZ: 2.482977 3.002362 -2.162092 [DEG: 142.2641 172.0227 -123.8787 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0572TS245_1-D1 REMARK 2: T0572-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0572TS245_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 86 86 4.0 51 2.81 44.227 4.76 REMARK ---------------------------------------------------------- MOLECULE T0572TS245_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0572 REMARK MODEL 1 REMARK PARENT 2kq1A ATOM 60 N LEU 8 22.652 2.269 -1.029 1.00 0.00 N ATOM 61 CA LEU 8 21.457 2.812 -1.607 1.00 0.00 C ATOM 62 CB LEU 8 21.100 2.158 -2.956 1.00 0.00 C ATOM 63 CG LEU 8 19.891 2.788 -3.677 1.00 0.00 C ATOM 64 CD1 LEU 8 18.562 2.495 -2.959 1.00 0.00 C ATOM 65 CD2 LEU 8 20.127 4.288 -3.928 1.00 0.00 C ATOM 66 C LEU 8 20.363 2.535 -0.624 1.00 0.00 C ATOM 67 O LEU 8 20.249 1.407 -0.149 1.00 0.00 O ATOM 68 N SER 9 19.542 3.558 -0.282 1.00 0.00 N ATOM 69 CA SER 9 18.497 3.372 0.697 1.00 0.00 C ATOM 70 CB SER 9 18.932 3.695 2.133 1.00 0.00 C ATOM 71 OG SER 9 19.166 5.091 2.250 1.00 0.00 O ATOM 72 C SER 9 17.359 4.308 0.385 1.00 0.00 C ATOM 73 O SER 9 17.431 5.069 -0.580 1.00 0.00 O ATOM 74 N LYS 10 16.259 4.256 1.188 1.00 0.00 N ATOM 75 CA LYS 10 15.116 5.096 0.921 1.00 0.00 C ATOM 76 CB LYS 10 14.240 4.518 -0.210 1.00 0.00 C ATOM 77 CG LYS 10 13.014 5.369 -0.543 1.00 0.00 C ATOM 78 CD LYS 10 12.329 5.003 -1.857 1.00 0.00 C ATOM 79 CE LYS 10 13.224 5.218 -3.079 1.00 0.00 C ATOM 80 NZ LYS 10 12.401 5.405 -4.297 1.00 0.00 N ATOM 81 C LYS 10 14.231 5.220 2.142 1.00 0.00 C ATOM 82 O LYS 10 14.353 4.475 3.113 1.00 0.00 O ATOM 83 N SER 11 13.312 6.212 2.121 1.00 0.00 N ATOM 84 CA SER 11 12.302 6.379 3.132 1.00 0.00 C ATOM 85 CB SER 11 12.240 7.793 3.728 1.00 0.00 C ATOM 86 OG SER 11 11.884 8.732 2.725 1.00 0.00 O ATOM 87 C SER 11 11.020 6.127 2.405 1.00 0.00 C ATOM 88 O SER 11 11.003 6.159 1.175 1.00 0.00 O ATOM 89 N VAL 12 9.903 5.852 3.103 1.00 0.00 N ATOM 90 CA VAL 12 8.808 5.486 2.260 1.00 0.00 C ATOM 91 CB VAL 12 8.536 4.012 2.340 1.00 0.00 C ATOM 92 CG1 VAL 12 7.356 3.663 1.428 1.00 0.00 C ATOM 93 CG2 VAL 12 9.823 3.253 1.993 1.00 0.00 C ATOM 94 C VAL 12 7.538 6.186 2.629 1.00 0.00 C ATOM 95 O VAL 12 7.054 6.135 3.760 1.00 0.00 O ATOM 96 N PRO 13 7.007 6.858 1.649 1.00 0.00 N ATOM 97 CA PRO 13 5.676 7.367 1.798 1.00 0.00 C ATOM 98 CD PRO 13 7.843 7.744 0.853 1.00 0.00 C ATOM 99 CB PRO 13 5.531 8.476 0.762 1.00 0.00 C ATOM 100 CG PRO 13 6.973 8.979 0.570 1.00 0.00 1 ATOM 101 C PRO 13 4.832 6.162 1.521 1.00 0.00 1 ATOM 102 O PRO 13 5.281 5.319 0.748 1.00 0.00 1 ATOM 103 N VAL 14 3.622 6.032 2.100 1.00 0.00 1 ATOM 104 CA VAL 14 2.898 4.820 1.836 1.00 0.00 1 ATOM 105 CB VAL 14 2.205 4.277 3.052 1.00 0.00 1 ATOM 106 CG1 VAL 14 1.376 3.047 2.654 1.00 0.00 1 ATOM 107 CG2 VAL 14 3.276 3.981 4.117 1.00 0.00 1 ATOM 108 C VAL 14 1.878 5.107 0.786 1.00 0.00 1 ATOM 109 O VAL 14 0.986 5.932 0.973 1.00 0.00 1 ATOM 110 N LYS 15 1.980 4.414 -0.362 1.00 0.00 1 ATOM 111 CA LYS 15 1.042 4.716 -1.392 1.00 0.00 1 ATOM 112 CB LYS 15 1.686 5.100 -2.732 1.00 0.00 1 ATOM 113 CG LYS 15 2.597 4.018 -3.306 1.00 0.00 1 ATOM 114 CD LYS 15 2.881 4.205 -4.795 1.00 0.00 1 ATOM 115 CE LYS 15 3.359 5.612 -5.160 1.00 0.00 1 ATOM 116 NZ LYS 15 3.587 5.702 -6.619 1.00 0.00 1 ATOM 117 C LYS 15 0.164 3.536 -1.613 1.00 0.00 1 ATOM 118 O LYS 15 0.593 2.383 -1.608 1.00 0.00 1 ATOM 119 N LEU 16 -1.129 3.831 -1.793 1.00 0.00 1 ATOM 120 CA LEU 16 -2.122 2.835 -2.014 1.00 0.00 1 ATOM 121 CB LEU 16 -3.265 2.990 -0.985 1.00 0.00 1 ATOM 122 CG LEU 16 -4.441 2.002 -1.074 1.00 0.00 1 ATOM 123 CD1 LEU 16 -5.381 2.180 0.128 1.00 0.00 1 ATOM 124 CD2 LEU 16 -5.205 2.129 -2.402 1.00 0.00 1 ATOM 125 C LEU 16 -2.628 3.085 -3.394 1.00 0.00 1 ATOM 126 O LEU 16 -3.020 4.204 -3.714 1.00 0.00 1 ATOM 127 N GLU 17 -2.632 2.058 -4.268 1.00 0.00 1 ATOM 128 CA GLU 17 -3.186 2.376 -5.549 1.00 0.00 1 ATOM 129 CB GLU 17 -2.422 1.860 -6.780 1.00 0.00 1 ATOM 130 CG GLU 17 -3.001 2.453 -8.070 1.00 0.00 1 ATOM 131 CD GLU 17 -2.839 3.970 -7.998 1.00 0.00 1 ATOM 132 OE1 GLU 17 -1.884 4.436 -7.322 1.00 0.00 1 ATOM 133 OE2 GLU 17 -3.671 4.685 -8.620 1.00 0.00 1 ATOM 134 C GLU 17 -4.571 1.827 -5.596 1.00 0.00 1 ATOM 135 O GLU 17 -4.789 0.619 -5.496 1.00 0.00 1 ATOM 136 N LEU 18 -5.542 2.748 -5.741 1.00 0.00 1 ATOM 137 CA LEU 18 -6.942 2.445 -5.797 1.00 0.00 1 ATOM 138 CB LEU 18 -7.843 3.463 -5.068 1.00 0.00 1 ATOM 139 CG LEU 18 -7.775 3.502 -3.530 1.00 0.00 1 ATOM 140 CD1 LEU 18 -8.719 4.586 -2.981 1.00 0.00 1 ATOM 141 CD2 LEU 18 -8.096 2.130 -2.917 1.00 0.00 1 ATOM 142 C LEU 18 -7.357 2.598 -7.215 1.00 0.00 1 ATOM 143 O LEU 18 -6.640 3.176 -8.031 1.00 0.00 1 ATOM 144 N THR 19 -8.544 2.058 -7.538 1.00 0.00 1 ATOM 145 CA THR 19 -9.069 2.229 -8.853 1.00 0.00 1 ATOM 146 CB THR 19 -9.377 0.940 -9.548 1.00 0.00 1 ATOM 147 OG1 THR 19 -8.207 0.142 -9.627 1.00 0.00 1 ATOM 148 CG2 THR 19 -9.876 1.266 -10.964 1.00 0.00 1 ATOM 149 C THR 19 -10.352 2.968 -8.689 1.00 0.00 1 ATOM 150 O THR 19 -11.139 2.670 -7.791 1.00 0.00 1 ATOM 151 N GLY 20 -10.580 3.978 -9.545 1.00 0.00 1 ATOM 152 CA GLY 20 -11.777 4.753 -9.451 1.00 0.00 1 ATOM 153 C GLY 20 -11.469 5.881 -8.528 1.00 0.00 1 ATOM 154 O GLY 20 -11.730 5.804 -7.328 1.00 0.00 1 ATOM 155 N ASP 21 -10.899 6.973 -9.076 1.00 0.00 1 ATOM 156 CA ASP 21 -10.574 8.075 -8.226 1.00 0.00 1 ATOM 157 CB ASP 21 -9.928 9.259 -8.967 1.00 0.00 1 ATOM 158 CG ASP 21 -8.487 8.909 -9.315 1.00 0.00 1 ATOM 159 OD1 ASP 21 -7.859 8.136 -8.544 1.00 0.00 1 ATOM 160 OD2 ASP 21 -7.995 9.414 -10.360 1.00 0.00 1 ATOM 161 C ASP 21 -11.856 8.561 -7.653 1.00 0.00 1 ATOM 162 O ASP 21 -11.985 8.718 -6.441 1.00 0.00 1 ATOM 163 N LYS 22 -12.861 8.784 -8.519 1.00 0.00 1 ATOM 164 CA LYS 22 -14.118 9.219 -8.002 1.00 0.00 1 ATOM 165 CB LYS 22 -15.177 9.413 -9.097 1.00 0.00 1 ATOM 166 CG LYS 22 -16.515 9.927 -8.558 1.00 0.00 1 ATOM 167 CD LYS 22 -17.571 10.196 -9.634 1.00 0.00 1 ATOM 168 CE LYS 22 -17.015 10.810 -10.919 1.00 0.00 1 ATOM 169 NZ LYS 22 -16.562 9.730 -11.822 1.00 0.00 1 ATOM 170 C LYS 22 -14.600 8.111 -7.133 1.00 0.00 1 ATOM 171 O LYS 22 -14.996 8.327 -5.990 1.00 0.00 1 ATOM 172 N ALA 23 -14.561 6.877 -7.669 1.00 0.00 1 ATOM 173 CA ALA 23 -14.969 5.737 -6.907 1.00 0.00 1 ATOM 174 CB ALA 23 -16.392 5.841 -6.335 1.00 0.00 1 ATOM 175 C ALA 23 -14.960 4.571 -7.836 1.00 0.00 1 ATOM 176 O ALA 23 -14.839 4.733 -9.049 1.00 0.00 1 ATOM 177 N SER 24 -15.068 3.355 -7.271 1.00 0.00 1 ATOM 178 CA SER 24 -15.099 2.163 -8.060 1.00 0.00 1 ATOM 179 CB SER 24 -13.741 1.770 -8.672 1.00 0.00 1 ATOM 180 OG SER 24 -13.884 0.637 -9.519 1.00 0.00 1 ATOM 181 C SER 24 -15.527 1.075 -7.134 1.00 0.00 1 ATOM 182 O SER 24 -16.547 1.194 -6.456 1.00 0.00 1 ATOM 183 N ASN 25 -14.758 -0.031 -7.099 1.00 0.00 1 ATOM 184 CA ASN 25 -15.109 -1.136 -6.261 1.00 0.00 1 ATOM 185 CB ASN 25 -14.040 -2.239 -6.219 1.00 0.00 1 ATOM 186 CG ASN 25 -13.904 -2.830 -7.605 1.00 0.00 1 ATOM 187 OD1 ASN 25 -14.504 -2.338 -8.559 1.00 0.00 1 ATOM 188 ND2 ASN 25 -13.093 -3.914 -7.722 1.00 0.00 1 ATOM 189 C ASN 25 -15.179 -0.647 -4.861 1.00 0.00 1 ATOM 190 O ASN 25 -16.186 -0.843 -4.182 1.00 0.00 1 ATOM 191 N VAL 26 -14.118 0.035 -4.394 1.00 0.00 1 ATOM 192 CA VAL 26 -14.152 0.420 -3.017 1.00 0.00 1 ATOM 193 CB VAL 26 -13.376 -0.499 -2.119 1.00 0.00 1 ATOM 194 CG1 VAL 26 -13.983 -1.911 -2.192 1.00 0.00 1 ATOM 195 CG2 VAL 26 -11.892 -0.418 -2.519 1.00 0.00 1 ATOM 196 C VAL 26 -13.494 1.744 -2.860 1.00 0.00 1 ATOM 197 O VAL 26 -12.887 2.285 -3.783 1.00 0.00 1 ATOM 198 N SER 27 -13.649 2.316 -1.655 1.00 0.00 1 ATOM 199 CA SER 27 -12.972 3.519 -1.290 1.00 0.00 1 ATOM 200 CB SER 27 -13.904 4.700 -0.954 1.00 0.00 2 ATOM 201 OG SER 27 -13.141 5.845 -0.597 1.00 0.00 2 ATOM 202 C SER 27 -12.223 3.133 -0.058 1.00 0.00 2 ATOM 203 O SER 27 -12.561 2.147 0.595 1.00 0.00 2 ATOM 204 N SER 28 -11.159 3.870 0.300 1.00 0.00 2 ATOM 205 CA SER 28 -10.453 3.410 1.458 1.00 0.00 2 ATOM 206 CB SER 28 -8.930 3.649 1.405 1.00 0.00 2 ATOM 207 OG SER 28 -8.309 3.188 2.599 1.00 0.00 2 ATOM 208 C SER 28 -10.986 4.118 2.651 1.00 0.00 2 ATOM 209 O SER 28 -11.002 5.349 2.703 1.00 0.00 2 ATOM 210 N ILE 29 -11.485 3.338 3.634 1.00 0.00 2 ATOM 211 CA ILE 29 -11.946 3.974 4.827 1.00 0.00 2 ATOM 212 CB ILE 29 -12.671 3.078 5.801 1.00 0.00 2 ATOM 213 CG2 ILE 29 -13.921 2.535 5.089 1.00 0.00 2 ATOM 214 CG1 ILE 29 -11.760 1.987 6.383 1.00 0.00 2 ATOM 215 CD1 ILE 29 -12.363 1.261 7.585 1.00 0.00 2 ATOM 216 C ILE 29 -10.735 4.515 5.503 1.00 0.00 2 ATOM 217 O ILE 29 -10.710 5.664 5.935 1.00 0.00 2 ATOM 218 N SER 30 -9.668 3.697 5.589 1.00 0.00 2 ATOM 219 CA SER 30 -8.499 4.184 6.247 1.00 0.00 2 ATOM 220 CB SER 30 -8.565 4.079 7.780 1.00 0.00 2 ATOM 221 OG SER 30 -9.514 5.003 8.293 1.00 0.00 2 ATOM 222 C SER 30 -7.325 3.395 5.780 1.00 0.00 2 ATOM 223 O SER 30 -7.461 2.304 5.230 1.00 0.00 2 ATOM 224 N TYR 31 -6.125 3.970 5.985 1.00 0.00 2 ATOM 225 CA TYR 31 -4.898 3.350 5.592 1.00 0.00 2 ATOM 226 CB TYR 31 -4.390 3.852 4.229 1.00 0.00 2 ATOM 227 CG TYR 31 -4.324 5.339 4.287 1.00 0.00 2 ATOM 228 CD1 TYR 31 -5.471 6.072 4.123 1.00 0.00 2 ATOM 229 CD2 TYR 31 -3.142 6.007 4.520 1.00 0.00 2 ATOM 230 CE1 TYR 31 -5.433 7.442 4.175 1.00 0.00 2 ATOM 231 CE2 TYR 31 -3.096 7.383 4.572 1.00 0.00 2 ATOM 232 CZ TYR 31 -4.252 8.106 4.402 1.00 0.00 2 ATOM 233 OH TYR 31 -4.248 9.517 4.450 1.00 0.00 2 ATOM 234 C TYR 31 -3.874 3.633 6.643 1.00 0.00 2 ATOM 235 O TYR 31 -4.085 4.442 7.544 1.00 0.00 2 ATOM 236 N SER 32 -2.724 2.944 6.554 1.00 0.00 2 ATOM 237 CA SER 32 -1.717 3.104 7.556 1.00 0.00 2 ATOM 238 CB SER 32 -0.554 2.110 7.419 1.00 0.00 2 ATOM 239 OG SER 32 0.382 2.318 8.465 1.00 0.00 2 ATOM 240 C SER 32 -1.171 4.475 7.412 1.00 0.00 2 ATOM 241 O SER 32 -1.344 5.108 6.372 1.00 0.00 2 ATOM 242 N PHE 33 -0.503 4.964 8.474 1.00 0.00 2 ATOM 243 CA PHE 33 0.042 6.282 8.423 1.00 0.00 2 ATOM 244 CB PHE 33 0.833 6.654 9.692 1.00 0.00 2 ATOM 245 CG PHE 33 1.189 8.099 9.619 1.00 0.00 2 ATOM 246 CD1 PHE 33 0.285 9.057 10.022 1.00 0.00 2 ATOM 247 CD2 PHE 33 2.414 8.503 9.146 1.00 0.00 2 ATOM 248 CE1 PHE 33 0.598 10.394 9.958 1.00 0.00 2 ATOM 249 CE2 PHE 33 2.735 9.839 9.078 1.00 0.00 2 ATOM 250 CZ PHE 33 1.826 10.787 9.484 1.00 0.00 2 ATOM 251 C PHE 33 0.949 6.283 7.243 1.00 0.00 2 ATOM 252 O PHE 33 1.655 5.309 6.985 1.00 0.00 2 ATOM 253 N ASP 34 0.922 7.379 6.471 1.00 0.00 2 ATOM 254 CA ASP 34 1.661 7.404 5.248 1.00 0.00 2 ATOM 255 CB ASP 34 1.495 8.708 4.447 1.00 0.00 2 ATOM 256 CG ASP 34 1.976 9.874 5.293 1.00 0.00 2 ATOM 257 OD1 ASP 34 1.380 10.102 6.378 1.00 0.00 2 ATOM 258 OD2 ASP 34 2.934 10.568 4.856 1.00 0.00 2 ATOM 259 C ASP 34 3.104 7.203 5.556 1.00 0.00 2 ATOM 260 O ASP 34 3.825 6.588 4.773 1.00 0.00 2 ATOM 261 N ARG 35 3.579 7.719 6.700 1.00 0.00 2 ATOM 262 CA ARG 35 4.959 7.526 7.026 1.00 0.00 2 ATOM 263 CB ARG 35 5.404 8.293 8.285 1.00 0.00 2 ATOM 264 CG ARG 35 5.538 9.808 8.113 1.00 0.00 2 ATOM 265 CD ARG 35 5.763 10.510 9.452 1.00 0.00 2 ATOM 266 NE ARG 35 6.243 11.893 9.180 1.00 0.00 2 ATOM 267 CZ ARG 35 6.951 12.544 10.148 1.00 0.00 2 ATOM 268 NH1 ARG 35 7.122 11.956 11.368 1.00 0.00 2 ATOM 269 NH2 ARG 35 7.502 13.766 9.895 1.00 0.00 2 ATOM 270 C ARG 35 5.172 6.077 7.313 1.00 0.00 2 ATOM 271 O ARG 35 4.374 5.438 7.998 1.00 0.00 2 ATOM 272 N GLY 36 6.269 5.517 6.770 1.00 0.00 2 ATOM 273 CA GLY 36 6.632 4.154 7.018 1.00 0.00 2 ATOM 274 C GLY 36 8.121 4.163 7.064 1.00 0.00 2 ATOM 275 O GLY 36 8.764 4.895 6.313 1.00 0.00 2 ATOM 276 N HIS 37 8.715 3.338 7.946 1.00 0.00 2 ATOM 277 CA HIS 37 10.141 3.355 8.034 1.00 0.00 2 ATOM 278 ND1 HIS 37 10.826 5.017 11.442 1.00 0.00 2 ATOM 279 CG HIS 37 10.380 4.735 10.171 1.00 0.00 2 ATOM 280 CB HIS 37 10.698 3.456 9.460 1.00 0.00 2 ATOM 281 NE2 HIS 37 9.629 6.770 10.782 1.00 0.00 2 ATOM 282 CD2 HIS 37 9.650 5.813 9.780 1.00 0.00 2 ATOM 283 CE1 HIS 37 10.348 6.247 11.757 1.00 0.00 2 ATOM 284 C HIS 37 10.656 2.058 7.529 1.00 0.00 2 ATOM 285 O HIS 37 10.144 0.990 7.854 1.00 0.00 2 ATOM 286 N VAL 38 11.692 2.127 6.683 1.00 0.00 2 ATOM 287 CA VAL 38 12.308 0.922 6.242 1.00 0.00 2 ATOM 288 CB VAL 38 11.770 0.403 4.938 1.00 0.00 2 ATOM 289 CG1 VAL 38 10.279 0.060 5.096 1.00 0.00 2 ATOM 290 CG2 VAL 38 12.049 1.453 3.854 1.00 0.00 2 ATOM 291 C VAL 38 13.721 1.283 5.975 1.00 0.00 2 ATOM 292 O VAL 38 14.015 2.410 5.580 1.00 0.00 2 ATOM 293 N THR 39 14.658 0.360 6.225 1.00 0.00 2 ATOM 294 CA THR 39 15.969 0.687 5.773 1.00 0.00 2 ATOM 295 CB THR 39 17.053 0.650 6.816 1.00 0.00 2 ATOM 296 OG1 THR 39 17.237 -0.661 7.323 1.00 0.00 2 ATOM 297 CG2 THR 39 16.662 1.609 7.952 1.00 0.00 2 ATOM 298 C THR 39 16.263 -0.319 4.717 1.00 0.00 2 ATOM 299 O THR 39 16.346 -1.518 4.987 1.00 0.00 2 ATOM 300 N ILE 40 16.401 0.163 3.467 1.00 0.00 3 ATOM 301 CA ILE 40 16.662 -0.714 2.372 1.00 0.00 3 ATOM 302 CB ILE 40 16.106 -0.261 1.046 1.00 0.00 3 ATOM 303 CG2 ILE 40 16.596 -1.251 -0.024 1.00 0.00 3 ATOM 304 CG1 ILE 40 14.581 -0.097 1.075 1.00 0.00 3 ATOM 305 CD1 ILE 40 14.129 1.169 1.792 1.00 0.00 3 ATOM 306 C ILE 40 18.122 -0.642 2.179 1.00 0.00 3 ATOM 307 O ILE 40 18.640 0.353 1.677 1.00 0.00 3 ATOM 308 N VAL 41 18.826 -1.702 2.589 1.00 0.00 3 ATOM 309 CA VAL 41 20.226 -1.707 2.362 1.00 0.00 3 ATOM 310 CB VAL 41 21.018 -2.361 3.450 1.00 0.00 3 ATOM 311 CG1 VAL 41 22.480 -2.449 2.982 1.00 0.00 3 ATOM 312 CG2 VAL 41 20.824 -1.569 4.755 1.00 0.00 3 ATOM 313 C VAL 41 20.394 -2.537 1.152 1.00 0.00 3 ATOM 314 O VAL 41 19.694 -3.532 0.966 1.00 0.00 3 ATOM 315 N GLY 42 21.307 -2.118 0.268 1.00 0.00 3 ATOM 316 CA GLY 42 21.517 -2.901 -0.899 1.00 0.00 3 ATOM 317 C GLY 42 22.322 -2.075 -1.828 1.00 0.00 3 ATOM 318 O GLY 42 22.548 -0.884 -1.606 1.00 0.00 3 ATOM 319 N SER 43 22.780 -2.710 -2.914 1.00 0.00 3 ATOM 320 CA SER 43 23.557 -1.971 -3.846 1.00 0.00 3 ATOM 321 CB SER 43 24.424 -2.851 -4.763 1.00 0.00 3 ATOM 322 OG SER 43 25.402 -3.529 -3.986 1.00 0.00 3 ATOM 323 C SER 43 22.612 -1.157 -4.660 1.00 0.00 3 ATOM 324 O SER 43 21.404 -1.395 -4.675 1.00 0.00 3 ATOM 325 N GLN 44 23.163 -0.141 -5.338 1.00 0.00 3 ATOM 326 CA GLN 44 22.396 0.773 -6.121 1.00 0.00 3 ATOM 327 CB GLN 44 23.268 1.920 -6.666 1.00 0.00 3 ATOM 328 CG GLN 44 22.482 3.131 -7.174 1.00 0.00 3 ATOM 329 CD GLN 44 22.312 3.021 -8.681 1.00 0.00 3 ATOM 330 OE1 GLN 44 23.173 2.493 -9.382 1.00 0.00 3 ATOM 331 NE2 GLN 44 21.175 3.557 -9.202 1.00 0.00 3 ATOM 332 C GLN 44 21.784 0.013 -7.257 1.00 0.00 3 ATOM 333 O GLN 44 20.659 0.296 -7.664 1.00 0.00 3 ATOM 334 N GLU 45 22.506 -0.994 -7.787 1.00 0.00 3 ATOM 335 CA GLU 45 22.020 -1.736 -8.916 1.00 0.00 3 ATOM 336 CB GLU 45 22.974 -2.857 -9.365 1.00 0.00 3 ATOM 337 CG GLU 45 22.512 -3.567 -10.638 1.00 0.00 3 ATOM 338 CD GLU 45 22.733 -2.606 -11.795 1.00 0.00 3 ATOM 339 OE1 GLU 45 23.150 -1.448 -11.523 1.00 0.00 3 ATOM 340 OE2 GLU 45 22.490 -3.013 -12.962 1.00 0.00 3 ATOM 341 C GLU 45 20.727 -2.387 -8.550 1.00 0.00 3 ATOM 342 O GLU 45 19.787 -2.399 -9.342 1.00 0.00 3 ATOM 343 N ALA 46 20.635 -2.936 -7.328 1.00 0.00 3 ATOM 344 CA ALA 46 19.415 -3.580 -6.946 1.00 0.00 3 ATOM 345 CB ALA 46 19.448 -4.114 -5.507 1.00 0.00 3 ATOM 346 C ALA 46 18.345 -2.549 -6.995 1.00 0.00 3 ATOM 347 O ALA 46 17.253 -2.797 -7.502 1.00 0.00 3 ATOM 348 N MET 47 18.661 -1.333 -6.514 1.00 0.00 3 ATOM 349 CA MET 47 17.681 -0.291 -6.496 1.00 0.00 3 ATOM 350 CB MET 47 18.234 1.048 -5.986 1.00 0.00 3 ATOM 351 CG MET 47 17.181 2.158 -5.964 1.00 0.00 3 ATOM 352 SD MET 47 15.876 1.928 -4.717 1.00 0.00 3 ATOM 353 CE MET 47 14.881 3.348 -5.256 1.00 0.00 3 ATOM 354 C MET 47 17.265 -0.086 -7.911 1.00 0.00 3 ATOM 355 O MET 47 16.092 0.152 -8.190 1.00 0.00 3 ATOM 356 N ASP 48 18.238 -0.205 -8.834 1.00 0.00 3 ATOM 357 CA ASP 48 18.031 -0.014 -10.239 1.00 0.00 3 ATOM 358 CB ASP 48 19.330 -0.180 -11.043 1.00 0.00 3 ATOM 359 CG ASP 48 19.091 0.362 -12.442 1.00 0.00 3 ATOM 360 OD1 ASP 48 18.147 -0.124 -13.118 1.00 0.00 3 ATOM 361 OD2 ASP 48 19.847 1.283 -12.851 1.00 0.00 3 ATOM 362 C ASP 48 17.042 -1.023 -10.738 1.00 0.00 3 ATOM 363 O ASP 48 16.209 -0.706 -11.587 1.00 0.00 3 ATOM 364 N LYS 49 17.093 -2.273 -10.238 1.00 0.00 3 ATOM 365 CA LYS 49 16.115 -3.209 -10.708 1.00 0.00 3 ATOM 366 CB LYS 49 16.297 -4.644 -10.187 1.00 0.00 3 ATOM 367 CG LYS 49 17.572 -5.239 -10.785 1.00 0.00 3 ATOM 368 CD LYS 49 17.594 -5.065 -12.308 1.00 0.00 3 ATOM 369 CE LYS 49 18.986 -5.040 -12.947 1.00 0.00 3 ATOM 370 NZ LYS 49 18.932 -4.275 -14.217 1.00 0.00 3 ATOM 371 C LYS 49 14.784 -2.674 -10.312 1.00 0.00 3 ATOM 372 O LYS 49 13.818 -2.781 -11.065 1.00 0.00 3 ATOM 373 N ILE 50 14.690 -2.073 -9.111 1.00 0.00 3 ATOM 374 CA ILE 50 13.459 -1.408 -8.816 1.00 0.00 3 ATOM 375 CB ILE 50 13.456 -0.694 -7.495 1.00 0.00 3 ATOM 376 CG2 ILE 50 12.207 0.202 -7.420 1.00 0.00 3 ATOM 377 CG1 ILE 50 13.578 -1.696 -6.342 1.00 0.00 3 ATOM 378 CD1 ILE 50 13.905 -1.023 -5.014 1.00 0.00 3 ATOM 379 C ILE 50 13.415 -0.347 -9.854 1.00 0.00 3 ATOM 380 O ILE 50 14.427 0.304 -10.095 1.00 0.00 3 ATOM 381 N ASP 51 12.273 -0.166 -10.539 1.00 0.00 3 ATOM 382 CA ASP 51 12.261 0.848 -11.553 1.00 0.00 3 ATOM 383 CB ASP 51 10.885 0.997 -12.231 1.00 0.00 3 ATOM 384 CG ASP 51 10.571 -0.303 -12.958 1.00 0.00 3 ATOM 385 OD1 ASP 51 11.539 -1.052 -13.255 1.00 0.00 3 ATOM 386 OD2 ASP 51 9.366 -0.570 -13.220 1.00 0.00 3 ATOM 387 C ASP 51 12.534 2.117 -10.828 1.00 0.00 3 ATOM 388 O ASP 51 13.375 2.924 -11.221 1.00 0.00 3 ATOM 389 N SER 52 11.811 2.283 -9.716 1.00 0.00 3 ATOM 390 CA SER 52 11.986 3.359 -8.800 1.00 0.00 3 ATOM 391 CB SER 52 12.188 4.725 -9.473 1.00 0.00 3 ATOM 392 OG SER 52 11.062 5.040 -10.278 1.00 0.00 3 ATOM 393 C SER 52 10.714 3.371 -8.039 1.00 0.00 3 ATOM 394 O SER 52 9.648 3.621 -8.598 1.00 0.00 3 ATOM 395 N ILE 53 10.767 3.089 -6.730 1.00 0.00 3 ATOM 396 CA ILE 53 9.487 3.026 -6.107 1.00 0.00 3 ATOM 397 CB ILE 53 8.875 1.655 -6.116 1.00 0.00 3 ATOM 398 CG2 ILE 53 8.616 1.236 -7.569 1.00 0.00 3 ATOM 399 CG1 ILE 53 9.761 0.671 -5.335 1.00 0.00 3 ATOM 400 CD1 ILE 53 9.077 -0.666 -5.054 1.00 0.00 4 ATOM 401 C ILE 53 9.576 3.409 -4.681 1.00 0.00 4 ATOM 402 O ILE 53 10.631 3.354 -4.052 1.00 0.00 4 ATOM 403 N THR 54 8.420 3.841 -4.157 1.00 0.00 4 ATOM 404 CA THR 54 8.253 4.041 -2.756 1.00 0.00 4 ATOM 405 CB THR 54 7.239 5.103 -2.422 1.00 0.00 4 ATOM 406 OG1 THR 54 7.180 5.319 -1.018 1.00 0.00 4 ATOM 407 CG2 THR 54 5.864 4.673 -2.960 1.00 0.00 4 ATOM 408 C THR 54 7.727 2.705 -2.347 1.00 0.00 4 ATOM 409 O THR 54 8.114 1.700 -2.941 1.00 0.00 4 ATOM 410 N VAL 55 6.877 2.619 -1.306 1.00 0.00 4 ATOM 411 CA VAL 55 6.322 1.323 -1.036 1.00 0.00 4 ATOM 412 CB VAL 55 6.433 0.894 0.393 1.00 0.00 4 ATOM 413 CG1 VAL 55 5.718 -0.458 0.538 1.00 0.00 4 ATOM 414 CG2 VAL 55 7.919 0.833 0.776 1.00 0.00 4 ATOM 415 C VAL 55 4.863 1.378 -1.362 1.00 0.00 4 ATOM 416 O VAL 55 4.048 1.908 -0.611 1.00 0.00 4 ATOM 417 N PRO 56 4.548 0.851 -2.510 1.00 0.00 4 ATOM 418 CA PRO 56 3.173 0.824 -2.937 1.00 0.00 4 ATOM 419 CD PRO 56 5.448 1.089 -3.627 1.00 0.00 4 ATOM 420 CB PRO 56 3.193 0.943 -4.460 1.00 0.00 4 ATOM 421 CG PRO 56 4.562 1.555 -4.784 1.00 0.00 4 ATOM 422 C PRO 56 2.494 -0.440 -2.515 1.00 0.00 4 ATOM 423 O PRO 56 3.167 -1.364 -2.063 1.00 0.00 4 ATOM 424 N VAL 57 1.156 -0.485 -2.653 1.00 0.00 4 ATOM 425 CA VAL 57 0.408 -1.690 -2.457 1.00 0.00 4 ATOM 426 CB VAL 57 -0.395 -1.702 -1.193 1.00 0.00 4 ATOM 427 CG1 VAL 57 0.563 -1.804 0.003 1.00 0.00 4 ATOM 428 CG2 VAL 57 -1.249 -0.424 -1.166 1.00 0.00 4 ATOM 429 C VAL 57 -0.549 -1.747 -3.602 1.00 0.00 4 ATOM 430 O VAL 57 -1.086 -0.718 -4.012 1.00 0.00 4 ATOM 431 N ASP 58 -0.765 -2.954 -4.160 1.00 0.00 4 ATOM 432 CA ASP 58 -1.653 -3.099 -5.272 1.00 0.00 4 ATOM 433 CB ASP 58 -1.226 -4.201 -6.253 1.00 0.00 4 ATOM 434 CG ASP 58 -2.043 -4.029 -7.522 1.00 0.00 4 ATOM 435 OD1 ASP 58 -2.770 -3.005 -7.619 1.00 0.00 4 ATOM 436 OD2 ASP 58 -1.954 -4.917 -8.411 1.00 0.00 4 ATOM 437 C ASP 58 -2.966 -3.494 -4.698 1.00 0.00 4 ATOM 438 O ASP 58 -3.255 -4.671 -4.499 1.00 0.00 4 ATOM 439 N ILE 59 -3.766 -2.462 -4.405 1.00 0.00 4 ATOM 440 CA ILE 59 -5.057 -2.482 -3.795 1.00 0.00 4 ATOM 441 CB ILE 59 -5.447 -1.121 -3.318 1.00 0.00 4 ATOM 442 CG2 ILE 59 -6.911 -1.139 -2.861 1.00 0.00 4 ATOM 443 CG1 ILE 59 -4.450 -0.708 -2.221 1.00 0.00 4 ATOM 444 CD1 ILE 59 -4.417 -1.670 -1.035 1.00 0.00 4 ATOM 445 C ILE 59 -6.128 -3.051 -4.675 1.00 0.00 4 ATOM 446 O ILE 59 -7.091 -3.620 -4.166 1.00 0.00 4 ATOM 447 N SER 60 -6.009 -2.901 -6.006 1.00 0.00 4 ATOM 448 CA SER 60 -7.069 -3.262 -6.911 1.00 0.00 4 ATOM 449 CB SER 60 -6.620 -3.185 -8.382 1.00 0.00 4 ATOM 450 OG SER 60 -5.521 -4.056 -8.603 1.00 0.00 4 ATOM 451 C SER 60 -7.566 -4.655 -6.657 1.00 0.00 4 ATOM 452 O SER 60 -8.767 -4.906 -6.736 1.00 0.00 4 ATOM 453 N GLN 61 -6.669 -5.608 -6.365 1.00 0.00 4 ATOM 454 CA GLN 61 -7.103 -6.952 -6.117 1.00 0.00 4 ATOM 455 CB GLN 61 -5.950 -7.968 -6.154 1.00 0.00 4 ATOM 456 CG GLN 61 -4.887 -7.779 -5.076 1.00 0.00 4 ATOM 457 CD GLN 61 -3.825 -8.843 -5.322 1.00 0.00 4 ATOM 458 OE1 GLN 61 -3.332 -9.485 -4.396 1.00 0.00 4 ATOM 459 NE2 GLN 61 -3.453 -9.031 -6.618 1.00 0.00 4 ATOM 460 C GLN 61 -7.853 -7.056 -4.814 1.00 0.00 4 ATOM 461 O GLN 61 -8.807 -7.826 -4.713 1.00 0.00 4 ATOM 462 N VAL 62 -7.456 -6.280 -3.781 1.00 0.00 4 ATOM 463 CA VAL 62 -8.084 -6.388 -2.488 1.00 0.00 4 ATOM 464 CB VAL 62 -7.420 -5.586 -1.408 1.00 0.00 4 ATOM 465 CG1 VAL 62 -8.291 -5.669 -0.142 1.00 0.00 4 ATOM 466 CG2 VAL 62 -5.989 -6.114 -1.205 1.00 0.00 4 ATOM 467 C VAL 62 -9.512 -5.948 -2.558 1.00 0.00 4 ATOM 468 O VAL 62 -9.866 -4.983 -3.234 1.00 0.00 4 ATOM 469 N THR 63 -10.376 -6.688 -1.833 1.00 0.00 4 ATOM 470 CA THR 63 -11.782 -6.430 -1.821 1.00 0.00 4 ATOM 471 CB THR 63 -12.585 -7.661 -2.143 1.00 0.00 4 ATOM 472 OG1 THR 63 -13.941 -7.325 -2.399 1.00 0.00 4 ATOM 473 CG2 THR 63 -12.479 -8.648 -0.968 1.00 0.00 4 ATOM 474 C THR 63 -12.158 -5.934 -0.459 1.00 0.00 4 ATOM 475 O THR 63 -11.315 -5.496 0.323 1.00 0.00 4 ATOM 476 N GLU 64 -13.468 -5.987 -0.156 1.00 0.00 4 ATOM 477 CA GLU 64 -14.018 -5.517 1.080 1.00 0.00 4 ATOM 478 CB GLU 64 -15.556 -5.611 1.068 1.00 0.00 4 ATOM 479 CG GLU 64 -16.070 -7.032 0.795 1.00 0.00 4 ATOM 480 CD GLU 64 -17.493 -6.973 0.244 1.00 0.00 4 ATOM 481 OE1 GLU 64 -17.932 -5.867 -0.169 1.00 0.00 4 ATOM 482 OE2 GLU 64 -18.155 -8.044 0.209 1.00 0.00 4 ATOM 483 C GLU 64 -13.465 -6.344 2.195 1.00 0.00 4 ATOM 484 O GLU 64 -13.363 -7.564 2.098 1.00 0.00 4 ATOM 485 N ASP 65 -13.056 -5.682 3.291 1.00 0.00 4 ATOM 486 CA ASP 65 -12.508 -6.424 4.382 1.00 0.00 4 ATOM 487 CB ASP 65 -10.993 -6.658 4.265 1.00 0.00 4 ATOM 488 CG ASP 65 -10.788 -7.743 3.217 1.00 0.00 4 ATOM 489 OD1 ASP 65 -11.065 -8.926 3.546 1.00 0.00 4 ATOM 490 OD2 ASP 65 -10.352 -7.409 2.082 1.00 0.00 4 ATOM 491 C ASP 65 -12.735 -5.649 5.625 1.00 0.00 4 ATOM 492 O ASP 65 -12.799 -4.420 5.604 1.00 0.00 4 ATOM 493 N THR 66 -12.877 -6.371 6.749 1.00 0.00 4 ATOM 494 CA THR 66 -12.991 -5.683 7.993 1.00 0.00 4 ATOM 495 CB THR 66 -13.073 -6.608 9.175 1.00 0.00 4 ATOM 496 OG1 THR 66 -11.923 -7.438 9.246 1.00 0.00 4 ATOM 497 CG2 THR 66 -14.339 -7.467 9.038 1.00 0.00 4 ATOM 498 C THR 66 -11.714 -4.931 8.080 1.00 0.00 4 ATOM 499 O THR 66 -11.676 -3.772 8.486 1.00 0.00 4 ATOM 500 N SER 67 -10.624 -5.614 7.696 1.00 0.00 5 ATOM 501 CA SER 67 -9.336 -5.008 7.598 1.00 0.00 5 ATOM 502 CB SER 67 -8.612 -4.875 8.947 1.00 0.00 5 ATOM 503 OG SER 67 -7.343 -4.264 8.761 1.00 0.00 5 ATOM 504 C SER 67 -8.531 -5.922 6.734 1.00 0.00 5 ATOM 505 O SER 67 -8.663 -7.143 6.810 1.00 0.00 5 ATOM 506 N LYS 68 -7.680 -5.343 5.868 1.00 0.00 5 ATOM 507 CA LYS 68 -6.862 -6.154 5.015 1.00 0.00 5 ATOM 508 CB LYS 68 -7.146 -5.928 3.518 1.00 0.00 5 ATOM 509 CG LYS 68 -6.525 -6.971 2.587 1.00 0.00 5 ATOM 510 CD LYS 68 -7.160 -8.358 2.711 1.00 0.00 5 ATOM 511 CE LYS 68 -6.577 -9.390 1.743 1.00 0.00 5 ATOM 512 NZ LYS 68 -5.332 -9.972 2.296 1.00 0.00 5 ATOM 513 C LYS 68 -5.447 -5.748 5.271 1.00 0.00 5 ATOM 514 O LYS 68 -5.173 -4.575 5.522 1.00 0.00 5 ATOM 515 N THR 69 -4.512 -6.723 5.229 1.00 0.00 5 ATOM 516 CA THR 69 -3.131 -6.412 5.464 1.00 0.00 5 ATOM 517 CB THR 69 -2.533 -7.103 6.653 1.00 0.00 5 ATOM 518 OG1 THR 69 -1.228 -6.594 6.885 1.00 0.00 5 ATOM 519 CG2 THR 69 -2.476 -8.618 6.390 1.00 0.00 5 ATOM 520 C THR 69 -2.320 -6.834 4.280 1.00 0.00 5 ATOM 521 O THR 69 -2.517 -7.909 3.716 1.00 0.00 5 ATOM 522 N LEU 70 -1.370 -5.969 3.875 1.00 0.00 5 ATOM 523 CA LEU 70 -0.523 -6.272 2.759 1.00 0.00 5 ATOM 524 CB LEU 70 -0.816 -5.437 1.501 1.00 0.00 5 ATOM 525 CG LEU 70 -2.098 -5.841 0.754 1.00 0.00 5 ATOM 526 CD1 LEU 70 -2.322 -4.937 -0.468 1.00 0.00 5 ATOM 527 CD2 LEU 70 -2.065 -7.327 0.359 1.00 0.00 5 ATOM 528 C LEU 70 0.891 -5.992 3.150 1.00 0.00 5 ATOM 529 O LEU 70 1.153 -5.275 4.117 1.00 0.00 5 ATOM 530 N GLU 71 1.837 -6.597 2.400 1.00 0.00 5 ATOM 531 CA GLU 71 3.244 -6.433 2.637 1.00 0.00 5 ATOM 532 CB GLU 71 3.885 -7.660 3.306 1.00 0.00 5 ATOM 533 CG GLU 71 3.752 -8.956 2.497 1.00 0.00 5 ATOM 534 CD GLU 71 4.450 -10.049 3.293 1.00 0.00 5 ATOM 535 OE1 GLU 71 5.114 -9.697 4.305 1.00 0.00 5 ATOM 536 OE2 GLU 71 4.338 -11.243 2.905 1.00 0.00 5 ATOM 537 C GLU 71 3.936 -6.255 1.310 1.00 0.00 5 ATOM 538 O GLU 71 3.425 -6.678 0.275 1.00 0.00 5 ATOM 539 N LEU 72 5.123 -5.600 1.318 1.00 0.00 5 ATOM 540 CA LEU 72 5.937 -5.374 0.148 1.00 0.00 5 ATOM 541 CB LEU 72 6.280 -3.892 -0.088 1.00 0.00 5 ATOM 542 CG LEU 72 7.150 -3.643 -1.335 1.00 0.00 5 ATOM 543 CD1 LEU 72 6.373 -3.909 -2.636 1.00 0.00 5 ATOM 544 CD2 LEU 72 7.801 -2.252 -1.289 1.00 0.00 5 ATOM 545 C LEU 72 7.241 -6.072 0.400 1.00 0.00 5 ATOM 546 O LEU 72 7.599 -6.308 1.552 1.00 0.00 5 ATOM 547 N LYS 73 7.991 -6.437 -0.662 1.00 0.00 5 ATOM 548 CA LYS 73 9.221 -7.134 -0.409 1.00 0.00 5 ATOM 549 CB LYS 73 9.240 -8.620 -0.813 1.00 0.00 5 ATOM 550 CG LYS 73 8.445 -9.547 0.105 1.00 0.00 5 ATOM 551 CD LYS 73 8.467 -11.004 -0.369 1.00 0.00 5 ATOM 552 CE LYS 73 9.665 -11.814 0.138 1.00 0.00 5 ATOM 553 NZ LYS 73 9.375 -12.328 1.495 1.00 0.00 5 ATOM 554 C LYS 73 10.342 -6.524 -1.170 1.00 0.00 5 ATOM 555 O LYS 73 10.220 -5.505 -1.848 1.00 0.00 5 ATOM 556 N ALA 74 11.511 -7.156 -0.995 1.00 0.00 5 ATOM 557 CA ALA 74 12.689 -6.799 -1.709 1.00 0.00 5 ATOM 558 CB ALA 74 13.268 -5.436 -1.306 1.00 0.00 5 ATOM 559 C ALA 74 13.701 -7.831 -1.354 1.00 0.00 5 ATOM 560 O ALA 74 13.605 -8.484 -0.316 1.00 0.00 5 ATOM 561 N GLU 75 14.689 -8.026 -2.239 1.00 0.00 5 ATOM 562 CA GLU 75 15.737 -8.954 -1.956 1.00 0.00 5 ATOM 563 CB GLU 75 16.641 -9.196 -3.172 1.00 0.00 5 ATOM 564 CG GLU 75 15.915 -9.984 -4.264 1.00 0.00 5 ATOM 565 CD GLU 75 16.785 -10.022 -5.510 1.00 0.00 5 ATOM 566 OE1 GLU 75 17.571 -9.058 -5.711 1.00 0.00 5 ATOM 567 OE2 GLU 75 16.672 -11.014 -6.279 1.00 0.00 5 ATOM 568 C GLU 75 16.533 -8.384 -0.830 1.00 0.00 5 ATOM 569 O GLU 75 16.973 -9.107 0.062 1.00 0.00 5 ATOM 570 N GLY 76 16.734 -7.055 -0.836 1.00 0.00 5 ATOM 571 CA GLY 76 17.452 -6.439 0.241 1.00 0.00 5 ATOM 572 C GLY 76 16.526 -5.423 0.824 1.00 0.00 5 ATOM 573 O GLY 76 15.817 -4.740 0.086 1.00 0.00 5 ATOM 574 N VAL 77 16.497 -5.320 2.171 1.00 0.00 5 ATOM 575 CA VAL 77 15.638 -4.362 2.805 1.00 0.00 5 ATOM 576 CB VAL 77 14.229 -4.410 2.287 1.00 0.00 5 ATOM 577 CG1 VAL 77 13.568 -5.695 2.811 1.00 0.00 5 ATOM 578 CG2 VAL 77 13.497 -3.104 2.637 1.00 0.00 5 ATOM 579 C VAL 77 15.568 -4.690 4.267 1.00 0.00 5 ATOM 580 O VAL 77 16.252 -5.594 4.741 1.00 0.00 5 ATOM 581 N THR 78 14.779 -3.893 5.019 1.00 0.00 5 ATOM 582 CA THR 78 14.432 -4.137 6.393 1.00 0.00 5 ATOM 583 CB THR 78 15.270 -3.423 7.397 1.00 0.00 5 ATOM 584 OG1 THR 78 15.016 -2.031 7.322 1.00 0.00 5 ATOM 585 CG2 THR 78 16.747 -3.718 7.093 1.00 0.00 5 ATOM 586 C THR 78 13.074 -3.532 6.505 1.00 0.00 5 ATOM 587 O THR 78 12.716 -2.686 5.686 1.00 0.00 5 ATOM 588 N VAL 79 12.259 -3.925 7.503 1.00 0.00 5 ATOM 589 CA VAL 79 10.971 -3.317 7.442 1.00 0.00 5 ATOM 590 CB VAL 79 9.964 -4.257 6.833 1.00 0.00 5 ATOM 591 CG1 VAL 79 8.580 -3.597 6.784 1.00 0.00 5 ATOM 592 CG2 VAL 79 10.487 -4.675 5.450 1.00 0.00 5 ATOM 593 C VAL 79 10.509 -2.941 8.814 1.00 0.00 5 ATOM 594 O VAL 79 10.430 -3.784 9.705 1.00 0.00 5 ATOM 595 N GLN 80 10.207 -1.641 9.006 1.00 0.00 5 ATOM 596 CA GLN 80 9.562 -1.198 10.207 1.00 0.00 5 ATOM 597 CB GLN 80 9.679 0.315 10.465 1.00 0.00 5 ATOM 598 CG GLN 80 11.069 0.728 10.959 1.00 0.00 5 ATOM 599 CD GLN 80 11.156 0.359 12.433 1.00 0.00 5 ATOM 600 OE1 GLN 80 10.274 0.720 13.212 1.00 0.00 6 ATOM 601 NE2 GLN 80 12.229 -0.380 12.827 1.00 0.00 6 ATOM 602 C GLN 80 8.163 -1.576 9.895 1.00 0.00 6 ATOM 603 O GLN 80 7.932 -1.758 8.702 1.00 0.00 6 ATOM 604 N PRO 81 7.235 -1.638 10.839 1.00 0.00 6 ATOM 605 CA PRO 81 5.968 -2.327 10.659 1.00 0.00 6 ATOM 606 CD PRO 81 7.106 -0.552 11.799 1.00 0.00 6 ATOM 607 CB PRO 81 4.992 -1.730 11.671 1.00 0.00 6 ATOM 608 CG PRO 81 5.592 -0.349 11.984 1.00 0.00 6 ATOM 609 C PRO 81 5.404 -2.424 9.281 1.00 0.00 6 ATOM 610 O PRO 81 4.859 -1.463 8.736 1.00 0.00 6 ATOM 611 N SER 82 5.590 -3.634 8.724 1.00 0.00 6 ATOM 612 CA SER 82 5.209 -4.037 7.414 1.00 0.00 6 ATOM 613 CB SER 82 5.774 -5.418 7.065 1.00 0.00 6 ATOM 614 OG SER 82 5.234 -6.380 7.960 1.00 0.00 6 ATOM 615 C SER 82 3.730 -4.150 7.366 1.00 0.00 6 ATOM 616 O SER 82 3.119 -3.829 6.350 1.00 0.00 6 ATOM 617 N THR 83 3.116 -4.614 8.471 1.00 0.00 6 ATOM 618 CA THR 83 1.700 -4.789 8.451 1.00 0.00 6 ATOM 619 CB THR 83 1.135 -5.332 9.738 1.00 0.00 6 ATOM 620 OG1 THR 83 -0.276 -5.477 9.639 1.00 0.00 6 ATOM 621 CG2 THR 83 1.505 -4.393 10.898 1.00 0.00 6 ATOM 622 C THR 83 1.094 -3.462 8.184 1.00 0.00 6 ATOM 623 O THR 83 1.298 -2.501 8.924 1.00 0.00 6 ATOM 624 N VAL 84 0.336 -3.377 7.079 1.00 0.00 6 ATOM 625 CA VAL 84 -0.307 -2.144 6.761 1.00 0.00 6 ATOM 626 CB VAL 84 -0.080 -1.702 5.345 1.00 0.00 6 ATOM 627 CG1 VAL 84 -0.869 -0.407 5.085 1.00 0.00 6 ATOM 628 CG2 VAL 84 1.435 -1.579 5.117 1.00 0.00 6 ATOM 629 C VAL 84 -1.758 -2.418 6.900 1.00 0.00 6 ATOM 630 O VAL 84 -2.233 -3.479 6.499 1.00 0.00 6 ATOM 631 N LYS 85 -2.495 -1.467 7.492 1.00 0.00 6 ATOM 632 CA LYS 85 -3.895 -1.667 7.681 1.00 0.00 6 ATOM 633 CB LYS 85 -4.355 -1.185 9.069 1.00 0.00 6 ATOM 634 CG LYS 85 -5.847 -1.364 9.342 1.00 0.00 6 ATOM 635 CD LYS 85 -6.208 -1.264 10.824 1.00 0.00 6 ATOM 636 CE LYS 85 -6.110 -2.606 11.555 1.00 0.00 6 ATOM 637 NZ LYS 85 -4.798 -2.735 12.229 1.00 0.00 6 ATOM 638 C LYS 85 -4.595 -0.864 6.641 1.00 0.00 6 ATOM 639 O LYS 85 -4.528 0.365 6.640 1.00 0.00 6 ATOM 640 N VAL 86 -5.267 -1.548 5.698 1.00 0.00 6 ATOM 641 CA VAL 86 -5.994 -0.810 4.722 1.00 0.00 6 ATOM 642 CB VAL 86 -5.330 -0.821 3.371 1.00 0.00 6 ATOM 643 CG1 VAL 86 -5.513 -2.197 2.712 1.00 0.00 6 ATOM 644 CG2 VAL 86 -5.824 0.382 2.558 1.00 0.00 6 ATOM 645 C VAL 86 -7.346 -1.445 4.661 1.00 0.00 6 ATOM 646 O VAL 86 -7.484 -2.664 4.552 1.00 0.00 6 ATOM 647 N ASN 87 -8.400 -0.625 4.770 1.00 0.00 6 ATOM 648 CA ASN 87 -9.710 -1.189 4.774 1.00 0.00 6 ATOM 649 CB ASN 87 -10.571 -0.666 5.934 1.00 0.00 6 ATOM 650 CG ASN 87 -11.900 -1.403 5.966 1.00 0.00 6 ATOM 651 OD1 ASN 87 -12.451 -1.788 4.936 1.00 0.00 6 ATOM 652 ND2 ASN 87 -12.447 -1.585 7.196 1.00 0.00 6 ATOM 653 C ASN 87 -10.349 -0.767 3.504 1.00 0.00 6 ATOM 654 O ASN 87 -10.372 0.417 3.171 1.00 0.00 6 ATOM 655 N LEU 88 -10.863 -1.746 2.743 1.00 0.00 6 ATOM 656 CA LEU 88 -11.538 -1.408 1.535 1.00 0.00 6 ATOM 657 CB LEU 88 -11.012 -2.158 0.304 1.00 0.00 6 ATOM 658 CG LEU 88 -9.520 -1.895 0.037 1.00 0.00 6 ATOM 659 CD1 LEU 88 -8.641 -2.476 1.153 1.00 0.00 6 ATOM 660 CD2 LEU 88 -9.107 -2.395 -1.350 1.00 0.00 6 ATOM 661 C LEU 88 -12.939 -1.840 1.743 1.00 0.00 6 ATOM 662 O LEU 88 -13.216 -3.019 1.954 1.00 0.00 6 ATOM 663 N LYS 89 -13.864 -0.876 1.711 1.00 0.00 6 ATOM 664 CA LYS 89 -15.233 -1.212 1.913 1.00 0.00 6 ATOM 665 CB LYS 89 -15.788 -0.742 3.263 1.00 0.00 6 ATOM 666 CG LYS 89 -15.879 0.780 3.360 1.00 0.00 6 ATOM 667 CD LYS 89 -16.695 1.260 4.554 1.00 0.00 6 ATOM 668 CE LYS 89 -16.839 2.779 4.621 1.00 0.00 6 ATOM 669 NZ LYS 89 -17.399 3.150 5.937 1.00 0.00 6 ATOM 670 C LYS 89 -15.966 -0.462 0.871 1.00 0.00 6 ATOM 671 O LYS 89 -15.391 0.389 0.194 1.00 0.00 6 ATOM 672 N VAL 90 -17.261 -0.763 0.702 1.00 0.00 6 ATOM 673 CA VAL 90 -17.990 -0.041 -0.285 1.00 0.00 6 ATOM 674 CB VAL 90 -19.415 -0.491 -0.400 1.00 0.00 6 ATOM 675 CG1 VAL 90 -20.138 0.395 -1.424 1.00 0.00 6 ATOM 676 CG2 VAL 90 -19.409 -1.987 -0.765 1.00 0.00 6 ATOM 677 C VAL 90 -17.950 1.382 0.154 1.00 0.00 6 ATOM 678 O VAL 90 -18.075 1.682 1.341 1.00 0.00 6 ATOM 679 N THR 91 -17.747 2.296 -0.809 1.00 0.00 6 ATOM 680 CA THR 91 -17.634 3.678 -0.470 1.00 0.00 6 ATOM 681 CB THR 91 -17.396 4.566 -1.655 1.00 0.00 6 ATOM 682 OG1 THR 91 -17.210 5.908 -1.229 1.00 0.00 6 ATOM 683 CG2 THR 91 -18.604 4.458 -2.602 1.00 0.00 6 ATOM 684 C THR 91 -18.919 4.086 0.150 1.00 0.00 6 ATOM 685 O THR 91 -19.983 3.580 -0.202 1.00 0.00 6 ATOM 686 N GLN 92 -18.844 4.989 1.143 1.00 0.00 6 ATOM 687 CA GLN 92 -20.060 5.433 1.746 1.00 0.00 6 ATOM 688 CB GLN 92 -20.602 4.515 2.851 1.00 0.00 6 ATOM 689 CG GLN 92 -19.705 4.421 4.082 1.00 0.00 6 ATOM 690 CD GLN 92 -20.420 3.508 5.068 1.00 0.00 6 ATOM 691 OE1 GLN 92 -20.073 3.446 6.246 1.00 0.00 6 ATOM 692 NE2 GLN 92 -21.465 2.788 4.580 1.00 0.00 6 ATOM 693 C GLN 92 -19.823 6.768 2.358 1.00 0.00 6 ATOM 694 O GLN 92 -18.774 7.385 2.180 1.00 0.00 6 ATOM 695 N LYS 93 -20.843 7.256 3.083 1.00 0.00 6 ATOM 696 CA LYS 93 -20.783 8.534 3.720 1.00 0.00 6 ATOM 697 CB LYS 93 -22.173 9.085 4.077 1.00 0.00 6 ATOM 698 CG LYS 93 -23.152 9.093 2.903 1.00 0.00 6 ATOM 699 CD LYS 93 -22.635 9.839 1.677 1.00 0.00 6 ATOM 700 CE LYS 93 -21.622 9.022 0.872 1.00 0.00 7 ATOM 701 NZ LYS 93 -21.340 9.683 -0.421 1.00 0.00 7 ATOM 702 C LYS 93 -20.063 8.331 5.047 1.00 0.00 7 ATOM 703 O LYS 93 -18.814 8.491 5.087 1.00 0.00 7 ATOM 704 OXT LYS 93 -20.767 8.019 6.045 1.00 0.00 7 TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 644 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 55.34 62.4 170 100.0 170 ARMSMC SECONDARY STRUCTURE . . 41.69 66.0 106 100.0 106 ARMSMC SURFACE . . . . . . . . 57.64 59.5 116 100.0 116 ARMSMC BURIED . . . . . . . . 50.03 68.5 54 100.0 54 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 92.78 36.7 79 100.0 79 ARMSSC1 RELIABLE SIDE CHAINS . 92.59 36.4 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 96.23 31.4 51 100.0 51 ARMSSC1 SURFACE . . . . . . . . 91.57 37.5 56 100.0 56 ARMSSC1 BURIED . . . . . . . . 95.66 34.8 23 100.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.66 51.1 45 100.0 45 ARMSSC2 RELIABLE SIDE CHAINS . 73.82 55.6 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 83.51 42.3 26 100.0 26 ARMSSC2 SURFACE . . . . . . . . 72.50 57.1 35 100.0 35 ARMSSC2 BURIED . . . . . . . . 97.21 30.0 10 100.0 10 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.44 35.0 20 100.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 80.42 43.8 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 74.17 46.2 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 88.68 31.6 19 100.0 19 ARMSSC3 BURIED . . . . . . . . 3.15 100.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.51 40.0 10 100.0 10 ARMSSC4 RELIABLE SIDE CHAINS . 83.51 40.0 10 100.0 10 ARMSSC4 SECONDARY STRUCTURE . . 66.69 50.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 83.51 40.0 10 100.0 10 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 4.76 (Number of atoms: 86) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 4.76 86 100.0 86 CRMSCA CRN = ALL/NP . . . . . 0.0554 CRMSCA SECONDARY STRUCTURE . . 4.27 53 100.0 53 CRMSCA SURFACE . . . . . . . . 4.98 59 100.0 59 CRMSCA BURIED . . . . . . . . 4.24 27 100.0 27 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 4.85 426 100.0 426 CRMSMC SECONDARY STRUCTURE . . 4.37 264 100.0 264 CRMSMC SURFACE . . . . . . . . 5.04 292 100.0 292 CRMSMC BURIED . . . . . . . . 4.41 134 100.0 134 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.04 300 30.9 971 CRMSSC RELIABLE SIDE CHAINS . 6.07 246 26.8 917 CRMSSC SECONDARY STRUCTURE . . 5.35 191 30.6 625 CRMSSC SURFACE . . . . . . . . 6.41 219 33.6 651 CRMSSC BURIED . . . . . . . . 4.90 81 25.3 320 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.39 644 49.0 1315 CRMSALL SECONDARY STRUCTURE . . 4.82 403 48.1 837 CRMSALL SURFACE . . . . . . . . 5.67 455 51.3 887 CRMSALL BURIED . . . . . . . . 4.63 189 44.2 428 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.366 1.000 0.500 86 100.0 86 ERRCA SECONDARY STRUCTURE . . 3.937 1.000 0.500 53 100.0 53 ERRCA SURFACE . . . . . . . . 4.556 1.000 0.500 59 100.0 59 ERRCA BURIED . . . . . . . . 3.950 1.000 0.500 27 100.0 27 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.429 1.000 0.500 426 100.0 426 ERRMC SECONDARY STRUCTURE . . 4.026 1.000 0.500 264 100.0 264 ERRMC SURFACE . . . . . . . . 4.576 1.000 0.500 292 100.0 292 ERRMC BURIED . . . . . . . . 4.109 1.000 0.500 134 100.0 134 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.421 1.000 0.500 300 30.9 971 ERRSC RELIABLE SIDE CHAINS . 5.413 1.000 0.500 246 26.8 917 ERRSC SECONDARY STRUCTURE . . 4.834 1.000 0.500 191 30.6 625 ERRSC SURFACE . . . . . . . . 5.768 1.000 0.500 219 33.6 651 ERRSC BURIED . . . . . . . . 4.483 1.000 0.500 81 25.3 320 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.847 1.000 0.500 644 49.0 1315 ERRALL SECONDARY STRUCTURE . . 4.370 1.000 0.500 403 48.1 837 ERRALL SURFACE . . . . . . . . 5.082 1.000 0.500 455 51.3 887 ERRALL BURIED . . . . . . . . 4.282 1.000 0.500 189 44.2 428 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 13 22 50 86 86 86 DISTCA CA (P) 0.00 15.12 25.58 58.14 100.00 86 DISTCA CA (RMS) 0.00 1.57 1.97 3.20 4.76 DISTCA ALL (N) 4 82 156 330 626 644 1315 DISTALL ALL (P) 0.30 6.24 11.86 25.10 47.60 1315 DISTALL ALL (RMS) 0.92 1.59 2.06 3.20 5.10 DISTALL END of the results output