####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 86 ( 644), selected 86 , name T0572TS117_1-D1 # Molecule2: number of CA atoms 86 ( 1315), selected 86 , name T0572-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0572TS117_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 55 - 92 4.98 6.71 LCS_AVERAGE: 36.48 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 28 - 45 1.99 7.68 LCS_AVERAGE: 13.91 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 13 - 21 0.90 9.45 LONGEST_CONTINUOUS_SEGMENT: 9 14 - 22 0.86 12.18 LONGEST_CONTINUOUS_SEGMENT: 9 34 - 42 1.00 11.12 LONGEST_CONTINUOUS_SEGMENT: 9 35 - 43 0.94 10.40 LONGEST_CONTINUOUS_SEGMENT: 9 37 - 45 0.81 7.92 LCS_AVERAGE: 7.44 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 86 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 8 L 8 8 14 24 3 7 10 13 15 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT S 9 S 9 8 14 24 4 7 10 13 15 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT K 10 K 10 8 14 24 4 7 10 13 15 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT S 11 S 11 8 14 24 4 7 10 13 15 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 12 V 12 8 14 24 3 6 9 13 20 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT P 13 P 13 9 14 24 4 7 10 13 20 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 14 V 14 9 14 24 7 9 12 15 20 21 25 29 34 48 57 64 69 74 76 77 78 80 82 84 LCS_GDT K 15 K 15 9 14 24 7 9 12 15 20 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT L 16 L 16 9 14 24 7 9 12 15 20 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT E 17 E 17 9 14 24 4 9 12 15 20 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT L 18 L 18 9 14 24 7 9 12 15 20 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT T 19 T 19 9 14 24 7 9 12 15 20 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT G 20 G 20 9 14 24 7 9 12 15 20 21 27 31 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT D 21 D 21 9 14 26 7 9 12 15 20 21 26 31 36 47 59 64 69 74 76 77 78 80 82 84 LCS_GDT K 22 K 22 9 12 26 3 4 9 13 20 21 25 29 36 47 59 64 69 74 76 77 78 80 82 84 LCS_GDT A 23 A 23 3 12 26 3 4 6 11 14 20 22 23 28 33 36 39 49 65 73 77 78 80 82 84 LCS_GDT S 24 S 24 3 12 26 3 3 4 4 9 11 18 22 24 26 29 34 37 43 50 55 65 77 80 83 LCS_GDT N 25 N 25 3 12 26 3 3 3 14 20 21 24 29 32 36 42 55 68 74 76 77 78 80 82 84 LCS_GDT V 26 V 26 4 5 26 3 3 5 8 14 21 27 31 36 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT S 27 S 27 4 8 26 3 5 6 10 13 26 31 40 45 47 59 64 69 74 76 77 78 80 82 84 LCS_GDT S 28 S 28 4 18 26 3 3 10 17 22 31 33 40 45 46 54 63 69 74 76 77 77 80 82 84 LCS_GDT I 29 I 29 7 18 26 3 6 8 17 21 31 33 40 45 47 59 64 69 74 76 77 77 80 82 84 LCS_GDT S 30 S 30 7 18 26 3 6 8 17 22 31 33 40 45 49 59 64 69 74 76 77 78 80 82 84 LCS_GDT Y 31 Y 31 7 18 26 3 6 14 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT S 32 S 32 7 18 26 3 6 14 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT F 33 F 33 7 18 26 5 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT D 34 D 34 9 18 26 3 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT R 35 R 35 9 18 26 3 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT G 36 G 36 9 18 26 3 5 9 14 21 25 31 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT H 37 H 37 9 18 26 3 10 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 38 V 38 9 18 26 3 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT T 39 T 39 9 18 26 5 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT I 40 I 40 9 18 26 5 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 41 V 41 9 18 26 5 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT G 42 G 42 9 18 26 5 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT S 43 S 43 9 18 26 5 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT Q 44 Q 44 9 18 26 4 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT E 45 E 45 9 18 26 4 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT A 46 A 46 3 17 26 3 3 4 4 11 20 29 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT M 47 M 47 4 5 26 3 3 4 5 5 9 10 11 14 16 27 27 37 49 68 75 78 80 82 84 LCS_GDT D 48 D 48 4 5 26 3 3 4 5 5 8 11 15 18 21 25 32 40 48 58 72 78 80 82 84 LCS_GDT K 49 K 49 4 5 26 3 3 4 5 8 9 11 15 21 26 33 39 44 61 71 74 78 80 82 84 LCS_GDT I 50 I 50 4 8 26 3 3 4 4 8 9 11 15 19 22 28 31 38 45 51 64 76 79 82 84 LCS_GDT D 51 D 51 4 10 26 3 5 6 6 8 9 10 14 19 22 28 31 38 42 51 52 75 79 81 84 LCS_GDT S 52 S 52 4 10 26 3 5 6 6 8 9 12 15 19 26 33 38 44 58 69 74 78 80 82 84 LCS_GDT I 53 I 53 5 11 37 3 5 6 8 9 14 20 29 31 35 41 54 66 73 76 77 78 80 82 84 LCS_GDT T 54 T 54 5 11 37 3 5 7 8 10 17 27 31 33 35 42 55 69 74 76 77 78 80 82 84 LCS_GDT V 55 V 55 7 11 38 3 6 9 15 20 21 27 31 33 36 48 60 69 74 76 77 78 80 82 84 LCS_GDT P 56 P 56 7 11 38 3 6 12 15 20 21 27 31 33 37 48 61 69 74 76 77 78 80 82 84 LCS_GDT V 57 V 57 7 11 38 3 5 7 15 20 21 27 31 33 37 43 57 68 74 76 77 78 80 82 84 LCS_GDT D 58 D 58 7 11 38 3 6 7 15 20 21 27 31 33 37 43 57 68 74 76 77 78 80 82 84 LCS_GDT I 59 I 59 7 11 38 3 6 12 15 20 21 27 31 33 37 43 59 69 74 76 77 78 80 82 84 LCS_GDT S 60 S 60 7 11 38 3 6 12 15 20 21 27 31 33 37 48 60 69 74 76 77 78 80 82 84 LCS_GDT Q 61 Q 61 7 11 38 3 9 12 15 20 21 27 31 33 41 56 64 69 74 76 77 78 80 82 84 LCS_GDT V 62 V 62 4 11 38 3 4 10 14 20 21 27 31 36 47 59 64 69 74 76 77 78 80 82 84 LCS_GDT T 63 T 63 4 11 38 3 4 7 12 20 21 25 31 37 46 57 64 69 74 76 77 78 80 82 84 LCS_GDT E 64 E 64 6 10 38 3 5 6 11 20 22 31 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT D 65 D 65 6 10 38 3 5 9 16 21 22 31 40 45 49 59 64 69 74 76 77 78 80 82 84 LCS_GDT T 66 T 66 6 10 38 4 5 9 17 21 23 31 40 45 49 59 64 69 74 76 77 78 80 82 84 LCS_GDT S 67 S 67 6 10 38 3 5 10 17 21 26 32 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT K 68 K 68 6 9 38 3 7 10 17 21 22 27 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT T 69 T 69 6 9 38 3 5 9 13 21 26 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT L 70 L 70 3 8 38 3 4 6 11 15 23 31 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT E 71 E 71 5 11 38 5 10 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT L 72 L 72 5 11 38 3 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT K 73 K 73 6 11 38 4 5 7 13 23 28 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT A 74 A 74 6 11 38 4 8 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT E 75 E 75 6 11 38 4 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT G 76 G 76 6 11 38 4 8 12 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 77 V 77 6 11 38 4 5 12 16 25 31 33 38 45 50 59 64 68 74 76 77 78 80 82 84 LCS_GDT T 78 T 78 6 11 38 3 8 12 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 79 V 79 5 11 38 3 4 12 16 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT Q 80 Q 80 5 11 38 0 3 6 16 25 28 33 38 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT P 81 P 81 4 11 38 2 4 6 12 20 26 31 36 44 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT S 82 S 82 4 6 38 3 4 5 5 7 9 10 14 17 31 41 47 56 61 72 76 77 80 82 84 LCS_GDT T 83 T 83 4 6 38 3 4 6 6 19 26 31 36 45 46 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 84 V 84 4 7 38 3 4 12 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT K 85 K 85 6 7 38 4 6 10 17 21 22 27 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 86 V 86 6 7 38 4 6 10 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT N 87 N 87 6 7 38 4 6 10 17 22 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT L 88 L 88 6 7 38 4 6 11 17 22 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 LCS_GDT K 89 K 89 6 7 38 4 6 11 17 22 31 33 40 45 49 59 64 69 74 76 77 78 80 82 84 LCS_GDT V 90 V 90 6 7 38 4 6 11 17 22 31 33 40 45 49 59 64 69 74 76 77 78 80 82 84 LCS_GDT T 91 T 91 5 7 38 3 5 5 8 12 19 23 36 40 46 49 59 66 73 76 77 77 80 82 84 LCS_GDT Q 92 Q 92 5 6 38 3 5 5 10 13 19 23 29 37 46 50 61 69 74 76 77 78 80 82 84 LCS_GDT K 93 K 93 5 6 36 3 5 5 6 11 16 20 24 29 33 39 43 50 56 63 70 77 78 82 84 LCS_AVERAGE LCS_A: 19.28 ( 7.44 13.91 36.48 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 13 15 20 25 31 33 40 45 50 59 64 69 74 76 77 78 80 82 84 GDT PERCENT_AT 8.14 15.12 17.44 23.26 29.07 36.05 38.37 46.51 52.33 58.14 68.60 74.42 80.23 86.05 88.37 89.53 90.70 93.02 95.35 97.67 GDT RMS_LOCAL 0.32 0.77 0.89 1.33 1.63 2.20 2.28 2.82 3.01 3.90 4.18 4.38 4.69 4.88 4.99 5.06 5.49 5.40 5.64 5.88 GDT RMS_ALL_AT 10.56 7.84 7.81 7.71 7.67 7.56 7.60 7.14 7.18 6.73 6.44 6.35 6.27 6.27 6.25 6.24 6.11 6.14 6.09 6.08 # Checking swapping # possible swapping detected: D 21 D 21 # possible swapping detected: Y 31 Y 31 # possible swapping detected: F 33 F 33 # possible swapping detected: E 45 E 45 # possible swapping detected: D 51 D 51 # possible swapping detected: E 64 E 64 # possible swapping detected: E 71 E 71 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 8 L 8 10.184 0 0.038 1.268 15.406 1.667 0.833 LGA S 9 S 9 8.852 0 0.028 0.705 10.931 1.310 1.349 LGA K 10 K 10 8.871 0 0.128 0.864 11.122 5.119 2.487 LGA S 11 S 11 8.524 0 0.031 0.709 11.501 2.262 1.746 LGA V 12 V 12 8.187 0 0.259 0.348 8.688 6.548 6.735 LGA P 13 P 13 7.683 0 0.036 0.395 8.715 6.071 5.510 LGA V 14 V 14 8.329 0 0.073 1.113 11.654 5.952 4.014 LGA K 15 K 15 8.379 0 0.060 0.611 8.409 4.762 7.937 LGA L 16 L 16 8.285 0 0.109 0.977 8.467 4.762 7.143 LGA E 17 E 17 8.580 0 0.024 0.875 8.611 3.333 4.127 LGA L 18 L 18 8.836 0 0.053 0.146 9.868 2.500 2.024 LGA T 19 T 19 8.818 0 0.069 1.019 10.612 2.857 4.762 LGA G 20 G 20 9.192 0 0.073 0.073 9.405 1.429 1.429 LGA D 21 D 21 9.606 0 0.255 1.406 13.574 3.452 1.726 LGA K 22 K 22 7.163 0 0.307 0.708 11.125 4.048 6.931 LGA A 23 A 23 11.476 0 0.496 0.537 12.367 0.357 0.286 LGA S 24 S 24 13.876 0 0.171 0.210 15.757 0.000 0.000 LGA N 25 N 25 9.760 0 0.296 0.874 11.005 3.810 4.286 LGA V 26 V 26 6.818 0 0.653 0.949 7.810 18.214 14.286 LGA S 27 S 27 3.307 0 0.167 0.565 6.409 56.190 44.683 LGA S 28 S 28 2.925 0 0.539 0.543 6.906 65.119 50.000 LGA I 29 I 29 3.820 0 0.143 1.050 6.797 51.905 35.893 LGA S 30 S 30 3.321 0 0.050 0.610 3.570 55.476 52.540 LGA Y 31 Y 31 2.982 0 0.081 1.279 3.985 55.357 58.135 LGA S 32 S 32 2.490 0 0.109 0.157 2.671 59.048 62.302 LGA F 33 F 33 2.988 0 0.057 1.181 3.584 62.976 61.861 LGA D 34 D 34 2.387 0 0.094 0.193 3.309 64.881 59.226 LGA R 35 R 35 1.668 0 0.400 0.984 3.559 66.786 62.338 LGA G 36 G 36 3.925 0 0.117 0.117 3.925 50.119 50.119 LGA H 37 H 37 1.740 0 0.124 1.388 6.060 68.810 54.048 LGA V 38 V 38 1.513 0 0.093 1.113 4.338 86.190 77.891 LGA T 39 T 39 1.697 0 0.059 0.095 3.064 75.000 68.503 LGA I 40 I 40 1.874 0 0.042 0.062 2.436 68.810 71.905 LGA V 41 V 41 2.483 0 0.087 0.073 3.154 66.786 61.633 LGA G 42 G 42 2.163 0 0.019 0.019 2.376 64.762 64.762 LGA S 43 S 43 2.385 0 0.065 0.685 2.761 68.810 67.540 LGA Q 44 Q 44 1.699 0 0.140 1.450 6.514 72.857 54.868 LGA E 45 E 45 1.924 0 0.612 0.892 5.205 58.571 51.217 LGA A 46 A 46 3.973 0 0.311 0.321 7.365 30.952 33.429 LGA M 47 M 47 10.517 0 0.603 0.838 15.634 1.786 0.893 LGA D 48 D 48 13.427 0 0.129 0.139 15.582 0.000 0.000 LGA K 49 K 49 13.712 0 0.646 1.099 16.393 0.000 0.000 LGA I 50 I 50 14.902 0 0.066 0.116 16.070 0.000 0.000 LGA D 51 D 51 15.626 0 0.691 1.098 16.613 0.000 0.000 LGA S 52 S 52 13.217 0 0.079 0.587 14.409 0.000 0.000 LGA I 53 I 53 10.427 0 0.126 1.102 12.129 0.000 1.190 LGA T 54 T 54 10.299 0 0.230 0.975 10.670 0.357 0.612 LGA V 55 V 55 9.374 0 0.062 0.075 10.649 0.595 1.633 LGA P 56 P 56 9.984 0 0.062 0.087 9.984 0.714 0.884 LGA V 57 V 57 10.310 0 0.195 1.041 12.823 0.000 0.068 LGA D 58 D 58 10.658 0 0.032 0.967 11.171 0.000 0.833 LGA I 59 I 59 10.089 0 0.074 0.085 10.254 0.000 0.060 LGA S 60 S 60 10.128 0 0.122 0.687 10.226 0.357 0.476 LGA Q 61 Q 61 8.734 0 0.136 0.846 9.474 4.643 3.810 LGA V 62 V 62 6.604 0 0.213 0.258 7.234 14.405 16.871 LGA T 63 T 63 6.475 0 0.696 0.611 8.239 13.095 11.769 LGA E 64 E 64 3.783 0 0.141 0.854 4.259 45.119 43.492 LGA D 65 D 65 4.050 0 0.635 0.792 5.965 35.714 33.155 LGA T 66 T 66 4.125 0 0.045 1.003 4.498 46.905 43.605 LGA S 67 S 67 3.271 0 0.029 0.035 4.627 42.024 42.540 LGA K 68 K 68 4.305 0 0.134 0.867 8.876 45.119 24.709 LGA T 69 T 69 2.602 0 0.265 1.034 3.669 51.905 57.687 LGA L 70 L 70 3.704 0 0.560 1.432 10.093 52.024 31.071 LGA E 71 E 71 2.350 0 0.280 0.907 5.699 71.190 53.651 LGA L 72 L 72 2.291 0 0.158 0.178 3.878 55.714 68.631 LGA K 73 K 73 3.643 0 0.137 0.180 9.269 53.690 31.534 LGA A 74 A 74 2.001 0 0.105 0.126 2.587 64.881 66.476 LGA E 75 E 75 0.883 0 0.127 0.888 5.708 77.381 62.540 LGA G 76 G 76 3.248 0 0.090 0.090 4.646 47.381 47.381 LGA V 77 V 77 4.257 0 0.102 1.141 7.004 40.238 37.075 LGA T 78 T 78 3.969 0 0.105 0.113 4.451 43.452 42.517 LGA V 79 V 79 3.607 0 0.185 0.989 4.848 43.333 49.320 LGA Q 80 Q 80 4.677 0 0.104 0.948 11.240 24.286 13.492 LGA P 81 P 81 5.792 0 0.089 0.088 6.570 20.357 18.435 LGA S 82 S 82 8.314 0 0.322 0.901 9.878 8.810 6.190 LGA T 83 T 83 4.606 0 0.113 0.182 6.316 39.405 36.599 LGA V 84 V 84 2.623 0 0.103 1.068 6.807 57.976 41.429 LGA K 85 K 85 3.995 0 0.609 1.020 14.790 52.024 25.132 LGA V 86 V 86 1.603 0 0.053 1.112 3.560 68.810 66.327 LGA N 87 N 87 1.673 0 0.108 1.139 5.230 77.143 63.333 LGA L 88 L 88 1.344 0 0.194 0.250 3.336 79.286 69.345 LGA K 89 K 89 2.416 0 0.648 0.746 5.827 52.262 53.545 LGA V 90 V 90 2.626 0 0.174 1.044 5.263 54.286 49.116 LGA T 91 T 91 6.236 0 0.134 1.069 10.378 30.952 18.776 LGA Q 92 Q 92 6.686 0 0.132 1.220 10.442 7.857 4.021 LGA K 93 K 93 9.167 0 0.676 0.976 11.327 2.143 2.381 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 86 344 344 100.00 644 644 100.00 86 SUMMARY(RMSD_GDC): 6.070 6.056 6.504 32.040 28.641 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 86 86 4.0 40 2.82 43.605 37.424 1.371 LGA_LOCAL RMSD: 2.818 Number of atoms: 40 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.139 Number of assigned atoms: 86 Std_ASGN_ATOMS RMSD: 6.070 Standard rmsd on all 86 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.249445 * X + -0.507929 * Y + -0.824491 * Z + 41.307766 Y_new = -0.891227 * X + -0.453454 * Y + 0.009715 * Z + -10.433470 Z_new = -0.378803 * X + 0.732385 * Y + -0.565792 * Z + 9.048999 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.297890 0.388502 2.228564 [DEG: -74.3636 22.2596 127.6873 ] ZXZ: -1.582579 2.172190 -0.477327 [DEG: -90.6751 124.4573 -27.3488 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0572TS117_1-D1 REMARK 2: T0572-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0572TS117_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 86 86 4.0 40 2.82 37.424 6.07 REMARK ---------------------------------------------------------- MOLECULE T0572TS117_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0572 REMARK MODEL 1 REMARK PARENT N/A ATOM 60 N LEU 8 26.442 -5.813 10.314 1.00 0.00 N ATOM 61 CA LEU 8 25.727 -4.585 10.564 1.00 0.00 C ATOM 62 C LEU 8 24.761 -4.384 9.428 1.00 0.00 C ATOM 63 O LEU 8 25.082 -4.707 8.286 1.00 0.00 O ATOM 64 CB LEU 8 26.698 -3.405 10.640 1.00 0.00 C ATOM 65 CG LEU 8 27.727 -3.445 11.771 1.00 0.00 C ATOM 66 CD1 LEU 8 28.737 -2.318 11.620 1.00 0.00 C ATOM 67 CD2 LEU 8 27.046 -3.295 13.123 1.00 0.00 C ATOM 68 N SER 9 23.549 -3.863 9.739 1.00 0.00 N ATOM 69 CA SER 9 22.490 -3.643 8.794 1.00 0.00 C ATOM 70 C SER 9 22.183 -2.167 8.647 1.00 0.00 C ATOM 71 O SER 9 22.251 -1.425 9.626 1.00 0.00 O ATOM 72 CB SER 9 21.212 -4.350 9.247 1.00 0.00 C ATOM 73 OG SER 9 21.380 -5.757 9.249 1.00 0.00 O ATOM 74 N LYS 10 21.851 -1.714 7.406 1.00 0.00 N ATOM 75 CA LYS 10 21.552 -0.331 7.105 1.00 0.00 C ATOM 76 C LYS 10 20.115 -0.159 6.672 1.00 0.00 C ATOM 77 O LYS 10 19.626 -0.938 5.860 1.00 0.00 O ATOM 78 CB LYS 10 22.449 0.177 5.975 1.00 0.00 C ATOM 79 CG LYS 10 23.923 0.255 6.340 1.00 0.00 C ATOM 80 CD LYS 10 24.748 0.805 5.188 1.00 0.00 C ATOM 81 CE LYS 10 26.221 0.884 5.552 1.00 0.00 C ATOM 82 NZ LYS 10 27.042 1.431 4.436 1.00 0.00 N ATOM 83 N SER 11 19.432 0.905 7.157 1.00 0.00 N ATOM 84 CA SER 11 18.010 1.088 6.964 1.00 0.00 C ATOM 85 C SER 11 17.794 2.371 6.188 1.00 0.00 C ATOM 86 O SER 11 18.465 3.363 6.473 1.00 0.00 O ATOM 87 CB SER 11 17.293 1.180 8.313 1.00 0.00 C ATOM 88 OG SER 11 17.386 -0.042 9.024 1.00 0.00 O ATOM 89 N VAL 12 16.854 2.371 5.199 1.00 0.00 N ATOM 90 CA VAL 12 16.657 3.459 4.265 1.00 0.00 C ATOM 91 C VAL 12 15.162 3.577 3.974 1.00 0.00 C ATOM 92 O VAL 12 14.459 2.582 4.127 1.00 0.00 O ATOM 93 CB VAL 12 17.408 3.212 2.944 1.00 0.00 C ATOM 94 CG1 VAL 12 18.909 3.154 3.186 1.00 0.00 C ATOM 95 CG2 VAL 12 16.971 1.894 2.321 1.00 0.00 C ATOM 96 N PRO 13 14.628 4.736 3.590 1.00 0.00 N ATOM 97 CA PRO 13 13.233 4.803 3.114 1.00 0.00 C ATOM 98 C PRO 13 13.160 4.862 1.605 1.00 0.00 C ATOM 99 O PRO 13 13.929 5.606 0.999 1.00 0.00 O ATOM 100 CB PRO 13 12.688 6.086 3.743 1.00 0.00 C ATOM 101 CG PRO 13 13.872 6.989 3.838 1.00 0.00 C ATOM 102 CD PRO 13 15.066 6.094 4.016 1.00 0.00 C ATOM 103 N VAL 14 12.189 4.140 0.996 1.00 0.00 N ATOM 104 CA VAL 14 11.951 4.184 -0.431 1.00 0.00 C ATOM 105 C VAL 14 10.493 4.545 -0.541 1.00 0.00 C ATOM 106 O VAL 14 9.684 4.126 0.289 1.00 0.00 O ATOM 107 CB VAL 14 12.244 2.827 -1.095 1.00 0.00 C ATOM 108 CG1 VAL 14 11.940 2.885 -2.584 1.00 0.00 C ATOM 109 CG2 VAL 14 13.708 2.452 -0.918 1.00 0.00 C ATOM 110 N LYS 15 10.148 5.370 -1.555 1.00 0.00 N ATOM 111 CA LYS 15 8.862 5.992 -1.681 1.00 0.00 C ATOM 112 C LYS 15 7.852 5.015 -2.224 1.00 0.00 C ATOM 113 O LYS 15 8.081 4.335 -3.222 1.00 0.00 O ATOM 114 CB LYS 15 8.936 7.188 -2.633 1.00 0.00 C ATOM 115 CG LYS 15 7.629 7.948 -2.780 1.00 0.00 C ATOM 116 CD LYS 15 7.791 9.155 -3.689 1.00 0.00 C ATOM 117 CE LYS 15 6.483 9.917 -3.833 1.00 0.00 C ATOM 118 NZ LYS 15 6.626 11.101 -4.724 1.00 0.00 N ATOM 119 N LEU 16 6.696 4.932 -1.531 1.00 0.00 N ATOM 120 CA LEU 16 5.520 4.228 -1.958 1.00 0.00 C ATOM 121 C LEU 16 4.814 4.697 -3.182 1.00 0.00 C ATOM 122 O LEU 16 4.375 5.843 -3.269 1.00 0.00 O ATOM 123 CB LEU 16 4.446 4.269 -0.870 1.00 0.00 C ATOM 124 CG LEU 16 4.759 3.509 0.421 1.00 0.00 C ATOM 125 CD1 LEU 16 3.673 3.743 1.460 1.00 0.00 C ATOM 126 CD2 LEU 16 4.852 2.014 0.157 1.00 0.00 C ATOM 127 N GLU 17 4.626 3.758 -4.133 1.00 0.00 N ATOM 128 CA GLU 17 3.843 3.982 -5.314 1.00 0.00 C ATOM 129 C GLU 17 2.505 3.327 -5.115 1.00 0.00 C ATOM 130 O GLU 17 2.425 2.107 -4.998 1.00 0.00 O ATOM 131 CB GLU 17 4.534 3.379 -6.538 1.00 0.00 C ATOM 132 CG GLU 17 3.766 3.562 -7.837 1.00 0.00 C ATOM 133 CD GLU 17 4.474 2.940 -9.025 1.00 0.00 C ATOM 134 OE1 GLU 17 5.566 2.364 -8.831 1.00 0.00 O ATOM 135 OE2 GLU 17 3.938 3.029 -10.149 1.00 0.00 O ATOM 136 N LEU 18 1.426 4.138 -5.067 1.00 0.00 N ATOM 137 CA LEU 18 0.078 3.651 -4.927 1.00 0.00 C ATOM 138 C LEU 18 -0.535 3.471 -6.289 1.00 0.00 C ATOM 139 O LEU 18 -0.738 4.463 -6.989 1.00 0.00 O ATOM 140 CB LEU 18 -0.770 4.643 -4.129 1.00 0.00 C ATOM 141 CG LEU 18 -0.308 4.933 -2.699 1.00 0.00 C ATOM 142 CD1 LEU 18 -1.190 5.991 -2.053 1.00 0.00 C ATOM 143 CD2 LEU 18 -0.373 3.675 -1.848 1.00 0.00 C ATOM 144 N THR 19 -0.834 2.206 -6.699 1.00 0.00 N ATOM 145 CA THR 19 -1.491 1.950 -7.950 1.00 0.00 C ATOM 146 C THR 19 -2.900 1.411 -7.779 1.00 0.00 C ATOM 147 O THR 19 -3.241 0.762 -6.786 1.00 0.00 O ATOM 148 CB THR 19 -0.723 0.912 -8.788 1.00 0.00 C ATOM 149 OG1 THR 19 -0.659 -0.331 -8.077 1.00 0.00 O ATOM 150 CG2 THR 19 0.694 1.393 -9.064 1.00 0.00 C ATOM 151 N GLY 20 -3.744 1.676 -8.809 1.00 0.00 N ATOM 152 CA GLY 20 -5.049 1.092 -8.979 1.00 0.00 C ATOM 153 C GLY 20 -6.067 1.952 -8.297 1.00 0.00 C ATOM 154 O GLY 20 -5.718 2.992 -7.736 1.00 0.00 O ATOM 155 N ASP 21 -7.362 1.543 -8.388 1.00 0.00 N ATOM 156 CA ASP 21 -8.440 2.306 -7.826 1.00 0.00 C ATOM 157 C ASP 21 -9.489 1.360 -7.319 1.00 0.00 C ATOM 158 O ASP 21 -10.493 1.079 -7.975 1.00 0.00 O ATOM 159 CB ASP 21 -9.055 3.224 -8.885 1.00 0.00 C ATOM 160 CG ASP 21 -10.068 4.189 -8.302 1.00 0.00 C ATOM 161 OD1 ASP 21 -10.289 4.147 -7.074 1.00 0.00 O ATOM 162 OD2 ASP 21 -10.640 4.987 -9.073 1.00 0.00 O ATOM 163 N LYS 22 -9.291 0.866 -6.096 1.00 0.00 N ATOM 164 CA LYS 22 -10.055 -0.229 -5.569 1.00 0.00 C ATOM 165 C LYS 22 -9.806 0.043 -4.140 1.00 0.00 C ATOM 166 O LYS 22 -9.608 1.200 -3.780 1.00 0.00 O ATOM 167 CB LYS 22 -9.500 -1.562 -6.077 1.00 0.00 C ATOM 168 CG LYS 22 -9.664 -1.773 -7.573 1.00 0.00 C ATOM 169 CD LYS 22 -9.114 -3.122 -8.005 1.00 0.00 C ATOM 170 CE LYS 22 -9.269 -3.329 -9.502 1.00 0.00 C ATOM 171 NZ LYS 22 -8.729 -4.645 -9.940 1.00 0.00 N ATOM 172 N ALA 23 -9.817 -0.958 -3.267 1.00 0.00 N ATOM 173 CA ALA 23 -9.208 -0.801 -2.009 1.00 0.00 C ATOM 174 C ALA 23 -10.333 -0.324 -1.092 1.00 0.00 C ATOM 175 O ALA 23 -10.807 -1.036 -0.208 1.00 0.00 O ATOM 176 CB ALA 23 -8.085 0.221 -2.088 1.00 0.00 C ATOM 177 N SER 24 -10.853 0.897 -1.276 1.00 0.00 N ATOM 178 CA SER 24 -11.773 1.446 -0.334 1.00 0.00 C ATOM 179 C SER 24 -13.159 0.956 -0.598 1.00 0.00 C ATOM 180 O SER 24 -14.105 1.469 -0.006 1.00 0.00 O ATOM 181 CB SER 24 -11.780 2.973 -0.421 1.00 0.00 C ATOM 182 OG SER 24 -12.263 3.411 -1.679 1.00 0.00 O ATOM 183 N ASN 25 -13.302 -0.073 -1.448 1.00 0.00 N ATOM 184 CA ASN 25 -14.535 -0.369 -2.101 1.00 0.00 C ATOM 185 C ASN 25 -15.055 0.848 -2.812 1.00 0.00 C ATOM 186 O ASN 25 -16.143 1.338 -2.516 1.00 0.00 O ATOM 187 CB ASN 25 -15.584 -0.822 -1.085 1.00 0.00 C ATOM 188 CG ASN 25 -15.231 -2.145 -0.433 1.00 0.00 C ATOM 189 OD1 ASN 25 -14.521 -2.965 -1.016 1.00 0.00 O ATOM 190 ND2 ASN 25 -15.728 -2.358 0.780 1.00 0.00 N ATOM 191 N VAL 26 -14.306 1.319 -3.826 1.00 0.00 N ATOM 192 CA VAL 26 -14.302 2.648 -4.391 1.00 0.00 C ATOM 193 C VAL 26 -15.624 3.183 -4.896 1.00 0.00 C ATOM 194 O VAL 26 -15.780 4.386 -5.099 1.00 0.00 O ATOM 195 CB VAL 26 -13.362 2.741 -5.607 1.00 0.00 C ATOM 196 CG1 VAL 26 -11.929 2.436 -5.197 1.00 0.00 C ATOM 197 CG2 VAL 26 -13.778 1.747 -6.680 1.00 0.00 C ATOM 198 N SER 27 -16.651 2.333 -5.016 1.00 0.00 N ATOM 199 CA SER 27 -17.858 2.709 -5.682 1.00 0.00 C ATOM 200 C SER 27 -18.653 3.555 -4.696 1.00 0.00 C ATOM 201 O SER 27 -19.666 4.159 -5.056 1.00 0.00 O ATOM 202 CB SER 27 -18.656 1.467 -6.085 1.00 0.00 C ATOM 203 OG SER 27 -19.137 0.777 -4.944 1.00 0.00 O ATOM 204 N SER 28 -18.170 3.628 -3.430 1.00 0.00 N ATOM 205 CA SER 28 -18.771 4.387 -2.387 1.00 0.00 C ATOM 206 C SER 28 -17.849 5.493 -1.906 1.00 0.00 C ATOM 207 O SER 28 -18.295 6.638 -1.955 1.00 0.00 O ATOM 208 CB SER 28 -19.097 3.490 -1.191 1.00 0.00 C ATOM 209 OG SER 28 -19.668 4.241 -0.132 1.00 0.00 O ATOM 210 N ILE 29 -16.608 5.230 -1.380 1.00 0.00 N ATOM 211 CA ILE 29 -16.070 6.090 -0.325 1.00 0.00 C ATOM 212 C ILE 29 -14.635 6.543 -0.498 1.00 0.00 C ATOM 213 O ILE 29 -13.980 6.292 -1.505 1.00 0.00 O ATOM 214 CB ILE 29 -16.098 5.389 1.045 1.00 0.00 C ATOM 215 CG1 ILE 29 -15.248 4.116 1.011 1.00 0.00 C ATOM 216 CG2 ILE 29 -17.523 5.006 1.418 1.00 0.00 C ATOM 217 CD1 ILE 29 -15.030 3.491 2.372 1.00 0.00 C ATOM 218 N SER 30 -14.106 7.149 0.591 1.00 0.00 N ATOM 219 CA SER 30 -12.915 7.912 0.696 1.00 0.00 C ATOM 220 C SER 30 -11.769 6.946 0.682 1.00 0.00 C ATOM 221 O SER 30 -11.893 5.793 1.095 1.00 0.00 O ATOM 222 CB SER 30 -12.907 8.718 1.996 1.00 0.00 C ATOM 223 OG SER 30 -12.826 7.865 3.125 1.00 0.00 O ATOM 224 N TYR 31 -10.605 7.431 0.208 1.00 0.00 N ATOM 225 CA TYR 31 -9.323 6.833 0.433 1.00 0.00 C ATOM 226 C TYR 31 -8.595 7.712 1.430 1.00 0.00 C ATOM 227 O TYR 31 -8.600 8.935 1.283 1.00 0.00 O ATOM 228 CB TYR 31 -8.533 6.749 -0.875 1.00 0.00 C ATOM 229 CG TYR 31 -7.138 6.190 -0.713 1.00 0.00 C ATOM 230 CD1 TYR 31 -6.933 4.825 -0.551 1.00 0.00 C ATOM 231 CD2 TYR 31 -6.030 7.028 -0.723 1.00 0.00 C ATOM 232 CE1 TYR 31 -5.661 4.305 -0.402 1.00 0.00 C ATOM 233 CE2 TYR 31 -4.751 6.524 -0.577 1.00 0.00 C ATOM 234 CZ TYR 31 -4.574 5.151 -0.415 1.00 0.00 C ATOM 235 OH TYR 31 -3.307 4.635 -0.268 1.00 0.00 H ATOM 236 N SER 32 -7.984 7.123 2.496 1.00 0.00 N ATOM 237 CA SER 32 -7.019 7.813 3.312 1.00 0.00 C ATOM 238 C SER 32 -5.840 6.888 3.486 1.00 0.00 C ATOM 239 O SER 32 -6.013 5.677 3.622 1.00 0.00 O ATOM 240 CB SER 32 -7.621 8.162 4.676 1.00 0.00 C ATOM 241 OG SER 32 -8.716 9.051 4.537 1.00 0.00 O ATOM 242 N PHE 33 -4.615 7.463 3.412 1.00 0.00 N ATOM 243 CA PHE 33 -3.372 6.751 3.492 1.00 0.00 C ATOM 244 C PHE 33 -2.697 7.031 4.819 1.00 0.00 C ATOM 245 O PHE 33 -2.611 8.175 5.264 1.00 0.00 O ATOM 246 CB PHE 33 -2.433 7.185 2.365 1.00 0.00 C ATOM 247 CG PHE 33 -1.093 6.508 2.399 1.00 0.00 C ATOM 248 CD1 PHE 33 -0.950 5.201 1.965 1.00 0.00 C ATOM 249 CD2 PHE 33 0.027 7.177 2.863 1.00 0.00 C ATOM 250 CE1 PHE 33 0.283 4.578 1.996 1.00 0.00 C ATOM 251 CE2 PHE 33 1.259 6.554 2.894 1.00 0.00 C ATOM 252 CZ PHE 33 1.389 5.260 2.463 1.00 0.00 C ATOM 253 N ASP 34 -2.226 5.947 5.485 1.00 0.00 N ATOM 254 CA ASP 34 -1.504 5.953 6.741 1.00 0.00 C ATOM 255 C ASP 34 -0.171 6.677 6.812 1.00 0.00 C ATOM 256 O ASP 34 0.018 7.468 7.733 1.00 0.00 O ATOM 257 CB ASP 34 -1.173 4.524 7.176 1.00 0.00 C ATOM 258 CG ASP 34 -2.393 3.765 7.660 1.00 0.00 C ATOM 259 OD1 ASP 34 -3.441 4.407 7.884 1.00 0.00 O ATOM 260 OD2 ASP 34 -2.302 2.529 7.814 1.00 0.00 O ATOM 261 N ARG 35 0.778 6.478 5.867 1.00 0.00 N ATOM 262 CA ARG 35 2.142 6.953 6.074 1.00 0.00 C ATOM 263 C ARG 35 2.493 7.749 4.847 1.00 0.00 C ATOM 264 O ARG 35 1.756 8.648 4.456 1.00 0.00 O ATOM 265 CB ARG 35 3.100 5.773 6.247 1.00 0.00 C ATOM 266 CG ARG 35 2.855 4.952 7.504 1.00 0.00 C ATOM 267 CD ARG 35 3.967 3.943 7.730 1.00 0.00 C ATOM 268 NE ARG 35 3.761 3.165 8.950 1.00 0.00 N ATOM 269 CZ ARG 35 3.127 1.997 8.993 1.00 0.00 C ATOM 270 NH1 ARG 35 2.988 1.362 10.148 1.00 0.00 H ATOM 271 NH2 ARG 35 2.636 1.468 7.881 1.00 0.00 H ATOM 272 N GLY 36 3.610 7.402 4.171 1.00 0.00 N ATOM 273 CA GLY 36 4.152 8.202 3.113 1.00 0.00 C ATOM 274 C GLY 36 5.280 7.445 2.464 1.00 0.00 C ATOM 275 O GLY 36 5.845 7.923 1.479 1.00 0.00 O ATOM 276 N HIS 37 5.674 6.274 3.029 1.00 0.00 N ATOM 277 CA HIS 37 7.026 5.788 2.924 1.00 0.00 C ATOM 278 C HIS 37 7.014 4.385 3.485 1.00 0.00 C ATOM 279 O HIS 37 6.066 4.022 4.186 1.00 0.00 O ATOM 280 CB HIS 37 7.979 6.679 3.723 1.00 0.00 C ATOM 281 CG HIS 37 7.699 6.698 5.193 1.00 0.00 C ATOM 282 ND1 HIS 37 8.232 5.774 6.064 1.00 0.00 N ATOM 283 CD2 HIS 37 6.912 7.534 6.089 1.00 0.00 C ATOM 284 CE1 HIS 37 7.803 6.047 7.310 1.00 0.00 C ATOM 285 NE2 HIS 37 7.010 7.102 7.331 1.00 0.00 N ATOM 286 N VAL 38 8.066 3.563 3.193 1.00 0.00 N ATOM 287 CA VAL 38 8.330 2.309 3.884 1.00 0.00 C ATOM 288 C VAL 38 9.721 2.367 4.414 1.00 0.00 C ATOM 289 O VAL 38 10.634 2.807 3.723 1.00 0.00 O ATOM 290 CB VAL 38 8.195 1.103 2.936 1.00 0.00 C ATOM 291 CG1 VAL 38 8.530 -0.188 3.666 1.00 0.00 C ATOM 292 CG2 VAL 38 6.773 0.999 2.405 1.00 0.00 C ATOM 293 N THR 39 9.898 1.839 5.636 1.00 0.00 N ATOM 294 CA THR 39 11.190 1.606 6.209 1.00 0.00 C ATOM 295 C THR 39 11.651 0.260 5.697 1.00 0.00 C ATOM 296 O THR 39 10.970 -0.742 5.932 1.00 0.00 O ATOM 297 CB THR 39 11.131 1.593 7.747 1.00 0.00 C ATOM 298 OG1 THR 39 10.646 2.855 8.221 1.00 0.00 O ATOM 299 CG2 THR 39 12.514 1.346 8.331 1.00 0.00 C ATOM 300 N ILE 40 12.817 0.209 5.001 1.00 0.00 N ATOM 301 CA ILE 40 13.407 -1.021 4.526 1.00 0.00 C ATOM 302 C ILE 40 14.838 -1.129 5.013 1.00 0.00 C ATOM 303 O ILE 40 15.436 -0.126 5.391 1.00 0.00 O ATOM 304 CB ILE 40 13.416 -1.085 2.987 1.00 0.00 C ATOM 305 CG1 ILE 40 14.232 0.074 2.410 1.00 0.00 C ATOM 306 CG2 ILE 40 11.998 -0.994 2.442 1.00 0.00 C ATOM 307 CD1 ILE 40 14.467 -0.028 0.919 1.00 0.00 C ATOM 308 N VAL 41 15.426 -2.346 4.961 1.00 0.00 N ATOM 309 CA VAL 41 16.798 -2.581 5.358 1.00 0.00 C ATOM 310 C VAL 41 17.400 -3.067 4.061 1.00 0.00 C ATOM 311 O VAL 41 16.830 -3.987 3.479 1.00 0.00 O ATOM 312 CB VAL 41 16.889 -3.628 6.483 1.00 0.00 C ATOM 313 CG1 VAL 41 18.341 -3.889 6.851 1.00 0.00 C ATOM 314 CG2 VAL 41 16.158 -3.140 7.725 1.00 0.00 C ATOM 315 N GLY 42 18.538 -2.498 3.561 1.00 0.00 N ATOM 316 CA GLY 42 19.418 -3.256 2.696 1.00 0.00 C ATOM 317 C GLY 42 20.418 -2.379 1.976 1.00 0.00 C ATOM 318 O GLY 42 20.610 -1.221 2.352 1.00 0.00 O ATOM 319 N SER 43 21.089 -2.954 0.940 1.00 0.00 N ATOM 320 CA SER 43 22.255 -2.423 0.270 1.00 0.00 C ATOM 321 C SER 43 21.836 -1.429 -0.803 1.00 0.00 C ATOM 322 O SER 43 20.664 -1.324 -1.142 1.00 0.00 O ATOM 323 CB SER 43 23.051 -3.549 -0.392 1.00 0.00 C ATOM 324 OG SER 43 22.325 -4.125 -1.465 1.00 0.00 O ATOM 325 N GLN 44 22.791 -0.721 -1.442 1.00 0.00 N ATOM 326 CA GLN 44 22.454 0.544 -2.059 1.00 0.00 C ATOM 327 C GLN 44 22.395 0.339 -3.563 1.00 0.00 C ATOM 328 O GLN 44 22.022 1.273 -4.271 1.00 0.00 O ATOM 329 CB GLN 44 23.511 1.600 -1.727 1.00 0.00 C ATOM 330 CG GLN 44 23.605 1.941 -0.249 1.00 0.00 C ATOM 331 CD GLN 44 24.659 2.991 0.041 1.00 0.00 C ATOM 332 OE1 GLN 44 25.226 3.585 -0.876 1.00 0.00 O ATOM 333 NE2 GLN 44 24.925 3.223 1.321 1.00 0.00 N ATOM 334 N GLU 45 22.730 -0.861 -4.101 1.00 0.00 N ATOM 335 CA GLU 45 23.059 -0.963 -5.520 1.00 0.00 C ATOM 336 C GLU 45 22.755 -2.356 -5.966 1.00 0.00 C ATOM 337 O GLU 45 22.642 -3.253 -5.135 1.00 0.00 O ATOM 338 CB GLU 45 24.541 -0.659 -5.749 1.00 0.00 C ATOM 339 CG GLU 45 25.486 -1.638 -5.075 1.00 0.00 C ATOM 340 CD GLU 45 26.944 -1.263 -5.261 1.00 0.00 C ATOM 341 OE1 GLU 45 27.215 -0.263 -5.960 1.00 0.00 O ATOM 342 OE2 GLU 45 27.814 -1.969 -4.711 1.00 0.00 O ATOM 343 N ALA 46 22.641 -2.559 -7.301 1.00 0.00 N ATOM 344 CA ALA 46 22.025 -3.743 -7.835 1.00 0.00 C ATOM 345 C ALA 46 22.556 -4.042 -9.210 1.00 0.00 C ATOM 346 O ALA 46 21.891 -4.733 -9.980 1.00 0.00 O ATOM 347 CB ALA 46 20.518 -3.560 -7.931 1.00 0.00 C ATOM 348 N MET 47 23.755 -3.530 -9.576 1.00 0.00 N ATOM 349 CA MET 47 24.243 -3.732 -10.913 1.00 0.00 C ATOM 350 C MET 47 25.340 -4.758 -10.969 1.00 0.00 C ATOM 351 O MET 47 26.156 -4.889 -10.056 1.00 0.00 O ATOM 352 CB MET 47 24.804 -2.426 -11.481 1.00 0.00 C ATOM 353 CG MET 47 23.760 -1.341 -11.688 1.00 0.00 C ATOM 354 SD MET 47 24.463 0.181 -12.353 1.00 0.00 S ATOM 355 CE MET 47 24.760 -0.297 -14.053 1.00 0.00 C ATOM 356 N ASP 48 25.412 -5.435 -12.130 1.00 0.00 N ATOM 357 CA ASP 48 26.352 -6.491 -12.454 1.00 0.00 C ATOM 358 C ASP 48 26.324 -7.758 -11.617 1.00 0.00 C ATOM 359 O ASP 48 26.294 -8.855 -12.178 1.00 0.00 O ATOM 360 CB ASP 48 27.790 -5.985 -12.326 1.00 0.00 C ATOM 361 CG ASP 48 28.165 -5.009 -13.424 1.00 0.00 C ATOM 362 OD1 ASP 48 27.413 -4.917 -14.418 1.00 0.00 O ATOM 363 OD2 ASP 48 29.209 -4.337 -13.292 1.00 0.00 O ATOM 364 N LYS 49 26.350 -7.658 -10.273 1.00 0.00 N ATOM 365 CA LYS 49 26.405 -8.803 -9.395 1.00 0.00 C ATOM 366 C LYS 49 25.006 -8.949 -8.873 1.00 0.00 C ATOM 367 O LYS 49 24.150 -8.123 -9.177 1.00 0.00 O ATOM 368 CB LYS 49 27.401 -8.560 -8.259 1.00 0.00 C ATOM 369 CG LYS 49 28.828 -8.322 -8.726 1.00 0.00 C ATOM 370 CD LYS 49 29.786 -8.232 -7.550 1.00 0.00 C ATOM 371 CE LYS 49 31.221 -8.062 -8.019 1.00 0.00 C ATOM 372 NZ LYS 49 32.173 -7.973 -6.876 1.00 0.00 N ATOM 373 N ILE 50 24.738 -10.035 -8.114 1.00 0.00 N ATOM 374 CA ILE 50 23.438 -10.328 -7.587 1.00 0.00 C ATOM 375 C ILE 50 23.155 -9.516 -6.347 1.00 0.00 C ATOM 376 O ILE 50 23.662 -9.834 -5.267 1.00 0.00 O ATOM 377 CB ILE 50 23.304 -11.815 -7.207 1.00 0.00 C ATOM 378 CG1 ILE 50 23.536 -12.701 -8.432 1.00 0.00 C ATOM 379 CG2 ILE 50 21.914 -12.102 -6.660 1.00 0.00 C ATOM 380 CD1 ILE 50 23.596 -14.179 -8.113 1.00 0.00 C ATOM 381 N ASP 51 22.317 -8.454 -6.494 1.00 0.00 N ATOM 382 CA ASP 51 21.673 -7.777 -5.391 1.00 0.00 C ATOM 383 C ASP 51 20.489 -7.044 -5.990 1.00 0.00 C ATOM 384 O ASP 51 20.514 -6.778 -7.191 1.00 0.00 O ATOM 385 CB ASP 51 22.639 -6.796 -4.726 1.00 0.00 C ATOM 386 CG ASP 51 22.216 -6.424 -3.319 1.00 0.00 C ATOM 387 OD1 ASP 51 21.115 -5.855 -3.161 1.00 0.00 O ATOM 388 OD2 ASP 51 22.984 -6.701 -2.374 1.00 0.00 O ATOM 389 N SER 52 19.452 -6.694 -5.178 1.00 0.00 N ATOM 390 CA SER 52 18.367 -5.812 -5.553 1.00 0.00 C ATOM 391 C SER 52 17.657 -5.391 -4.292 1.00 0.00 C ATOM 392 O SER 52 17.482 -6.211 -3.390 1.00 0.00 O ATOM 393 CB SER 52 17.387 -6.532 -6.481 1.00 0.00 C ATOM 394 OG SER 52 16.294 -5.695 -6.818 1.00 0.00 O ATOM 395 N ILE 53 17.176 -4.115 -4.246 1.00 0.00 N ATOM 396 CA ILE 53 16.224 -3.640 -3.274 1.00 0.00 C ATOM 397 C ILE 53 15.409 -2.554 -3.945 1.00 0.00 C ATOM 398 O ILE 53 15.928 -1.807 -4.775 1.00 0.00 O ATOM 399 CB ILE 53 16.926 -3.067 -2.029 1.00 0.00 C ATOM 400 CG1 ILE 53 15.906 -2.784 -0.925 1.00 0.00 C ATOM 401 CG2 ILE 53 17.641 -1.768 -2.370 1.00 0.00 C ATOM 402 CD1 ILE 53 16.528 -2.537 0.433 1.00 0.00 C ATOM 403 N THR 54 14.106 -2.438 -3.599 1.00 0.00 N ATOM 404 CA THR 54 13.201 -1.433 -4.097 1.00 0.00 C ATOM 405 C THR 54 12.030 -1.610 -3.163 1.00 0.00 C ATOM 406 O THR 54 12.093 -2.557 -2.387 1.00 0.00 O ATOM 407 CB THR 54 12.831 -1.687 -5.570 1.00 0.00 C ATOM 408 OG1 THR 54 12.134 -0.550 -6.094 1.00 0.00 O ATOM 409 CG2 THR 54 11.935 -2.911 -5.690 1.00 0.00 C ATOM 410 N VAL 55 10.942 -0.782 -3.237 1.00 0.00 N ATOM 411 CA VAL 55 9.606 -1.205 -2.827 1.00 0.00 C ATOM 412 C VAL 55 8.534 -0.380 -3.563 1.00 0.00 C ATOM 413 O VAL 55 8.325 0.772 -3.178 1.00 0.00 O ATOM 414 CB VAL 55 9.394 -1.017 -1.313 1.00 0.00 C ATOM 415 CG1 VAL 55 7.992 -1.452 -0.913 1.00 0.00 C ATOM 416 CG2 VAL 55 10.398 -1.848 -0.528 1.00 0.00 C ATOM 417 N PRO 56 7.789 -0.891 -4.543 1.00 0.00 N ATOM 418 CA PRO 56 6.500 -0.299 -4.951 1.00 0.00 C ATOM 419 C PRO 56 5.368 -1.009 -4.222 1.00 0.00 C ATOM 420 O PRO 56 5.339 -2.241 -4.216 1.00 0.00 O ATOM 421 CB PRO 56 6.448 -0.528 -6.463 1.00 0.00 C ATOM 422 CG PRO 56 7.224 -1.785 -6.677 1.00 0.00 C ATOM 423 CD PRO 56 8.275 -1.813 -5.604 1.00 0.00 C ATOM 424 N VAL 57 4.408 -0.260 -3.629 1.00 0.00 N ATOM 425 CA VAL 57 3.482 -0.811 -2.668 1.00 0.00 C ATOM 426 C VAL 57 2.131 -0.886 -3.283 1.00 0.00 C ATOM 427 O VAL 57 1.361 0.068 -3.236 1.00 0.00 O ATOM 428 CB VAL 57 3.398 0.060 -1.401 1.00 0.00 C ATOM 429 CG1 VAL 57 2.411 -0.536 -0.409 1.00 0.00 C ATOM 430 CG2 VAL 57 4.759 0.154 -0.729 1.00 0.00 C ATOM 431 N ASP 58 1.795 -2.064 -3.830 1.00 0.00 N ATOM 432 CA ASP 58 0.536 -2.251 -4.497 1.00 0.00 C ATOM 433 C ASP 58 -0.550 -2.544 -3.517 1.00 0.00 C ATOM 434 O ASP 58 -0.463 -3.540 -2.797 1.00 0.00 O ATOM 435 CB ASP 58 0.619 -3.421 -5.480 1.00 0.00 C ATOM 436 CG ASP 58 -0.665 -3.619 -6.261 1.00 0.00 C ATOM 437 OD1 ASP 58 -1.646 -2.896 -5.985 1.00 0.00 O ATOM 438 OD2 ASP 58 -0.691 -4.496 -7.149 1.00 0.00 O ATOM 439 N ILE 59 -1.602 -1.683 -3.501 1.00 0.00 N ATOM 440 CA ILE 59 -2.619 -1.591 -2.486 1.00 0.00 C ATOM 441 C ILE 59 -3.984 -2.139 -2.839 1.00 0.00 C ATOM 442 O ILE 59 -4.754 -2.390 -1.913 1.00 0.00 O ATOM 443 CB ILE 59 -2.884 -0.129 -2.083 1.00 0.00 C ATOM 444 CG1 ILE 59 -3.401 0.669 -3.281 1.00 0.00 C ATOM 445 CG2 ILE 59 -1.604 0.525 -1.584 1.00 0.00 C ATOM 446 CD1 ILE 59 -3.896 2.054 -2.923 1.00 0.00 C ATOM 447 N SER 60 -4.331 -2.308 -4.131 1.00 0.00 N ATOM 448 CA SER 60 -5.685 -2.256 -4.606 1.00 0.00 C ATOM 449 C SER 60 -6.627 -3.330 -4.081 1.00 0.00 C ATOM 450 O SER 60 -7.841 -3.170 -4.170 1.00 0.00 O ATOM 451 CB SER 60 -5.724 -2.393 -6.130 1.00 0.00 C ATOM 452 OG SER 60 -5.288 -3.678 -6.537 1.00 0.00 O ATOM 453 N GLN 61 -6.118 -4.475 -3.572 1.00 0.00 N ATOM 454 CA GLN 61 -6.959 -5.598 -3.248 1.00 0.00 C ATOM 455 C GLN 61 -7.693 -5.584 -1.907 1.00 0.00 C ATOM 456 O GLN 61 -8.111 -6.655 -1.470 1.00 0.00 O ATOM 457 CB GLN 61 -6.138 -6.890 -3.220 1.00 0.00 C ATOM 458 CG GLN 61 -5.458 -7.222 -4.537 1.00 0.00 C ATOM 459 CD GLN 61 -6.446 -7.436 -5.667 1.00 0.00 C ATOM 460 OE1 GLN 61 -7.435 -8.154 -5.511 1.00 0.00 O ATOM 461 NE2 GLN 61 -6.182 -6.814 -6.809 1.00 0.00 N ATOM 462 N VAL 62 -7.911 -4.428 -1.224 1.00 0.00 N ATOM 463 CA VAL 62 -8.485 -4.443 0.122 1.00 0.00 C ATOM 464 C VAL 62 -10.013 -4.416 -0.040 1.00 0.00 C ATOM 465 O VAL 62 -10.525 -4.081 -1.113 1.00 0.00 O ATOM 466 CB VAL 62 -8.028 -3.224 0.944 1.00 0.00 C ATOM 467 CG1 VAL 62 -8.715 -3.210 2.302 1.00 0.00 C ATOM 468 CG2 VAL 62 -6.525 -3.265 1.167 1.00 0.00 C ATOM 469 N THR 63 -10.750 -4.752 1.046 1.00 0.00 N ATOM 470 CA THR 63 -12.187 -4.785 1.081 1.00 0.00 C ATOM 471 C THR 63 -12.587 -3.919 2.280 1.00 0.00 C ATOM 472 O THR 63 -11.789 -3.138 2.797 1.00 0.00 O ATOM 473 CB THR 63 -12.716 -6.221 1.254 1.00 0.00 C ATOM 474 OG1 THR 63 -12.284 -6.744 2.516 1.00 0.00 O ATOM 475 CG2 THR 63 -12.190 -7.119 0.144 1.00 0.00 C ATOM 476 N GLU 64 -13.809 -4.122 2.811 1.00 0.00 N ATOM 477 CA GLU 64 -14.384 -3.222 3.779 1.00 0.00 C ATOM 478 C GLU 64 -13.741 -3.787 5.003 1.00 0.00 C ATOM 479 O GLU 64 -13.803 -5.003 5.178 1.00 0.00 O ATOM 480 CB GLU 64 -15.911 -3.322 3.763 1.00 0.00 C ATOM 481 CG GLU 64 -16.606 -2.361 4.715 1.00 0.00 C ATOM 482 CD GLU 64 -18.116 -2.487 4.668 1.00 0.00 C ATOM 483 OE1 GLU 64 -18.618 -3.357 3.927 1.00 0.00 O ATOM 484 OE2 GLU 64 -18.797 -1.714 5.376 1.00 0.00 O ATOM 485 N ASP 65 -13.058 -2.955 5.824 1.00 0.00 N ATOM 486 CA ASP 65 -12.773 -3.190 7.224 1.00 0.00 C ATOM 487 C ASP 65 -11.449 -3.887 7.315 1.00 0.00 C ATOM 488 O ASP 65 -10.828 -3.876 8.378 1.00 0.00 O ATOM 489 CB ASP 65 -13.861 -4.062 7.853 1.00 0.00 C ATOM 490 CG ASP 65 -15.175 -3.324 8.021 1.00 0.00 C ATOM 491 OD1 ASP 65 -15.177 -2.080 7.907 1.00 0.00 O ATOM 492 OD2 ASP 65 -16.203 -3.990 8.264 1.00 0.00 O ATOM 493 N THR 66 -10.977 -4.537 6.222 1.00 0.00 N ATOM 494 CA THR 66 -9.709 -5.206 6.208 1.00 0.00 C ATOM 495 C THR 66 -8.561 -4.242 6.076 1.00 0.00 C ATOM 496 O THR 66 -8.751 -3.044 5.863 1.00 0.00 O ATOM 497 CB THR 66 -9.605 -6.195 5.033 1.00 0.00 C ATOM 498 OG1 THR 66 -9.694 -5.480 3.794 1.00 0.00 O ATOM 499 CG2 THR 66 -10.732 -7.215 5.094 1.00 0.00 C ATOM 500 N SER 67 -7.319 -4.769 6.229 1.00 0.00 N ATOM 501 CA SER 67 -6.138 -3.981 6.133 1.00 0.00 C ATOM 502 C SER 67 -5.091 -4.738 5.370 1.00 0.00 C ATOM 503 O SER 67 -4.960 -5.954 5.504 1.00 0.00 O ATOM 504 CB SER 67 -5.597 -3.653 7.526 1.00 0.00 C ATOM 505 OG SER 67 -5.187 -4.828 8.203 1.00 0.00 O ATOM 506 N LYS 68 -4.263 -3.986 4.624 1.00 0.00 N ATOM 507 CA LYS 68 -3.025 -4.507 4.124 1.00 0.00 C ATOM 508 C LYS 68 -2.017 -4.164 5.184 1.00 0.00 C ATOM 509 O LYS 68 -1.689 -2.992 5.351 1.00 0.00 O ATOM 510 CB LYS 68 -2.672 -3.856 2.785 1.00 0.00 C ATOM 511 CG LYS 68 -1.494 -4.501 2.073 1.00 0.00 C ATOM 512 CD LYS 68 -1.337 -3.959 0.662 1.00 0.00 C ATOM 513 CE LYS 68 -0.893 -2.505 0.675 1.00 0.00 C ATOM 514 NZ LYS 68 -0.710 -1.967 -0.701 1.00 0.00 N ATOM 515 N THR 69 -1.505 -5.153 5.949 1.00 0.00 N ATOM 516 CA THR 69 -0.255 -5.037 6.661 1.00 0.00 C ATOM 517 C THR 69 0.806 -5.568 5.717 1.00 0.00 C ATOM 518 O THR 69 0.541 -5.604 4.523 1.00 0.00 O ATOM 519 CB THR 69 -0.271 -5.855 7.965 1.00 0.00 C ATOM 520 OG1 THR 69 -0.520 -7.234 7.665 1.00 0.00 O ATOM 521 CG2 THR 69 -1.361 -5.350 8.898 1.00 0.00 C ATOM 522 N LEU 70 2.012 -5.959 6.212 1.00 0.00 N ATOM 523 CA LEU 70 2.922 -6.960 5.670 1.00 0.00 C ATOM 524 C LEU 70 3.157 -7.006 4.178 1.00 0.00 C ATOM 525 O LEU 70 4.296 -6.768 3.776 1.00 0.00 O ATOM 526 CB LEU 70 2.433 -8.369 6.007 1.00 0.00 C ATOM 527 CG LEU 70 3.295 -9.526 5.500 1.00 0.00 C ATOM 528 CD1 LEU 70 4.677 -9.485 6.133 1.00 0.00 C ATOM 529 CD2 LEU 70 2.656 -10.864 5.841 1.00 0.00 C ATOM 530 N GLU 71 2.151 -7.366 3.344 1.00 0.00 N ATOM 531 CA GLU 71 2.289 -8.158 2.152 1.00 0.00 C ATOM 532 C GLU 71 2.648 -7.240 1.021 1.00 0.00 C ATOM 533 O GLU 71 1.812 -6.882 0.191 1.00 0.00 O ATOM 534 CB GLU 71 0.977 -8.878 1.833 1.00 0.00 C ATOM 535 CG GLU 71 0.514 -9.834 2.922 1.00 0.00 C ATOM 536 CD GLU 71 -0.837 -10.452 2.617 1.00 0.00 C ATOM 537 OE1 GLU 71 -1.440 -10.085 1.586 1.00 0.00 O ATOM 538 OE2 GLU 71 -1.292 -11.304 3.408 1.00 0.00 O ATOM 539 N LEU 72 3.933 -6.851 0.964 1.00 0.00 N ATOM 540 CA LEU 72 4.505 -6.173 -0.164 1.00 0.00 C ATOM 541 C LEU 72 5.392 -7.184 -0.817 1.00 0.00 C ATOM 542 O LEU 72 5.620 -8.252 -0.250 1.00 0.00 O ATOM 543 CB LEU 72 5.303 -4.951 0.293 1.00 0.00 C ATOM 544 CG LEU 72 4.540 -3.914 1.120 1.00 0.00 C ATOM 545 CD1 LEU 72 5.478 -2.820 1.608 1.00 0.00 C ATOM 546 CD2 LEU 72 3.445 -3.264 0.289 1.00 0.00 C ATOM 547 N LYS 73 5.919 -6.880 -2.024 1.00 0.00 N ATOM 548 CA LYS 73 6.626 -7.880 -2.775 1.00 0.00 C ATOM 549 C LYS 73 7.703 -7.166 -3.511 1.00 0.00 C ATOM 550 O LYS 73 7.415 -6.363 -4.399 1.00 0.00 O ATOM 551 CB LYS 73 5.681 -8.582 -3.753 1.00 0.00 C ATOM 552 CG LYS 73 6.318 -9.736 -4.511 1.00 0.00 C ATOM 553 CD LYS 73 5.305 -10.436 -5.402 1.00 0.00 C ATOM 554 CE LYS 73 5.928 -11.627 -6.114 1.00 0.00 C ATOM 555 NZ LYS 73 4.929 -12.369 -6.932 1.00 0.00 N ATOM 556 N ALA 74 8.973 -7.454 -3.143 1.00 0.00 N ATOM 557 CA ALA 74 10.111 -7.050 -3.912 1.00 0.00 C ATOM 558 C ALA 74 11.266 -7.876 -3.427 1.00 0.00 C ATOM 559 O ALA 74 11.222 -8.395 -2.312 1.00 0.00 O ATOM 560 CB ALA 74 10.391 -5.569 -3.706 1.00 0.00 C ATOM 561 N GLU 75 12.309 -8.013 -4.277 1.00 0.00 N ATOM 562 CA GLU 75 13.446 -8.857 -4.022 1.00 0.00 C ATOM 563 C GLU 75 14.223 -8.149 -2.951 1.00 0.00 C ATOM 564 O GLU 75 14.506 -6.960 -3.086 1.00 0.00 O ATOM 565 CB GLU 75 14.283 -9.026 -5.291 1.00 0.00 C ATOM 566 CG GLU 75 15.448 -9.991 -5.142 1.00 0.00 C ATOM 567 CD GLU 75 16.224 -10.172 -6.432 1.00 0.00 C ATOM 568 OE1 GLU 75 15.849 -9.542 -7.443 1.00 0.00 O ATOM 569 OE2 GLU 75 17.207 -10.942 -6.431 1.00 0.00 O ATOM 570 N GLY 76 14.511 -8.848 -1.824 1.00 0.00 N ATOM 571 CA GLY 76 15.551 -8.455 -0.919 1.00 0.00 C ATOM 572 C GLY 76 14.904 -7.766 0.260 1.00 0.00 C ATOM 573 O GLY 76 15.591 -7.403 1.213 1.00 0.00 O ATOM 574 N VAL 77 13.565 -7.547 0.228 1.00 0.00 N ATOM 575 CA VAL 77 12.906 -6.677 1.168 1.00 0.00 C ATOM 576 C VAL 77 12.409 -7.451 2.366 1.00 0.00 C ATOM 577 O VAL 77 11.809 -8.519 2.238 1.00 0.00 O ATOM 578 CB VAL 77 11.694 -5.972 0.533 1.00 0.00 C ATOM 579 CG1 VAL 77 10.957 -5.139 1.570 1.00 0.00 C ATOM 580 CG2 VAL 77 12.142 -5.052 -0.592 1.00 0.00 C ATOM 581 N THR 78 12.575 -6.840 3.563 1.00 0.00 N ATOM 582 CA THR 78 12.023 -7.335 4.798 1.00 0.00 C ATOM 583 C THR 78 11.428 -6.112 5.471 1.00 0.00 C ATOM 584 O THR 78 12.106 -5.089 5.587 1.00 0.00 O ATOM 585 CB THR 78 13.108 -7.976 5.683 1.00 0.00 C ATOM 586 OG1 THR 78 13.719 -9.066 4.982 1.00 0.00 O ATOM 587 CG2 THR 78 12.500 -8.502 6.974 1.00 0.00 C ATOM 588 N VAL 79 10.146 -6.189 5.929 1.00 0.00 N ATOM 589 CA VAL 79 9.376 -5.023 6.317 1.00 0.00 C ATOM 590 C VAL 79 8.462 -5.450 7.440 1.00 0.00 C ATOM 591 O VAL 79 8.397 -6.629 7.784 1.00 0.00 O ATOM 592 CB VAL 79 8.538 -4.484 5.143 1.00 0.00 C ATOM 593 CG1 VAL 79 9.443 -4.016 4.014 1.00 0.00 C ATOM 594 CG2 VAL 79 7.618 -5.568 4.602 1.00 0.00 C ATOM 595 N GLN 80 7.744 -4.459 8.025 1.00 0.00 N ATOM 596 CA GLN 80 6.832 -4.603 9.136 1.00 0.00 C ATOM 597 C GLN 80 5.776 -5.693 9.039 1.00 0.00 C ATOM 598 O GLN 80 5.019 -5.716 8.071 1.00 0.00 O ATOM 599 CB GLN 80 6.040 -3.312 9.349 1.00 0.00 C ATOM 600 CG GLN 80 5.062 -3.368 10.512 1.00 0.00 C ATOM 601 CD GLN 80 5.758 -3.480 11.854 1.00 0.00 C ATOM 602 OE1 GLN 80 6.852 -2.948 12.043 1.00 0.00 O ATOM 603 NE2 GLN 80 5.125 -4.174 12.792 1.00 0.00 N ATOM 604 N PRO 81 5.613 -6.533 10.054 1.00 0.00 N ATOM 605 CA PRO 81 4.503 -7.497 10.081 1.00 0.00 C ATOM 606 C PRO 81 3.200 -6.918 10.592 1.00 0.00 C ATOM 607 O PRO 81 2.163 -7.419 10.165 1.00 0.00 O ATOM 608 CB PRO 81 4.994 -8.601 11.018 1.00 0.00 C ATOM 609 CG PRO 81 5.971 -7.921 11.917 1.00 0.00 C ATOM 610 CD PRO 81 6.641 -6.866 11.084 1.00 0.00 C ATOM 611 N SER 82 3.201 -5.921 11.506 1.00 0.00 N ATOM 612 CA SER 82 2.063 -5.733 12.376 1.00 0.00 C ATOM 613 C SER 82 1.361 -4.494 11.853 1.00 0.00 C ATOM 614 O SER 82 0.134 -4.459 11.807 1.00 0.00 O ATOM 615 CB SER 82 2.521 -5.537 13.823 1.00 0.00 C ATOM 616 OG SER 82 3.210 -6.679 14.300 1.00 0.00 O ATOM 617 N THR 83 2.089 -3.465 11.365 1.00 0.00 N ATOM 618 CA THR 83 1.505 -2.139 11.415 1.00 0.00 C ATOM 619 C THR 83 0.834 -1.934 10.065 1.00 0.00 C ATOM 620 O THR 83 1.108 -2.673 9.117 1.00 0.00 O ATOM 621 CB THR 83 2.577 -1.059 11.652 1.00 0.00 C ATOM 622 OG1 THR 83 3.487 -1.034 10.546 1.00 0.00 O ATOM 623 CG2 THR 83 3.357 -1.352 12.924 1.00 0.00 C ATOM 624 N VAL 84 -0.028 -0.899 9.938 1.00 0.00 N ATOM 625 CA VAL 84 -1.043 -0.819 8.917 1.00 0.00 C ATOM 626 C VAL 84 -0.453 -0.012 7.782 1.00 0.00 C ATOM 627 O VAL 84 0.019 1.105 7.975 1.00 0.00 O ATOM 628 CB VAL 84 -2.318 -0.133 9.442 1.00 0.00 C ATOM 629 CG1 VAL 84 -3.352 -0.010 8.333 1.00 0.00 C ATOM 630 CG2 VAL 84 -2.927 -0.938 10.579 1.00 0.00 C ATOM 631 N LYS 85 -0.516 -0.558 6.552 1.00 0.00 N ATOM 632 CA LYS 85 -0.310 0.202 5.346 1.00 0.00 C ATOM 633 C LYS 85 -1.546 0.978 4.972 1.00 0.00 C ATOM 634 O LYS 85 -1.429 2.162 4.656 1.00 0.00 O ATOM 635 CB LYS 85 0.038 -0.727 4.180 1.00 0.00 C ATOM 636 CG LYS 85 1.384 -1.419 4.318 1.00 0.00 C ATOM 637 CD LYS 85 2.531 -0.435 4.152 1.00 0.00 C ATOM 638 CE LYS 85 3.876 -1.125 4.308 1.00 0.00 C ATOM 639 NZ LYS 85 5.008 -0.166 4.186 1.00 0.00 N ATOM 640 N VAL 86 -2.738 0.336 4.994 1.00 0.00 N ATOM 641 CA VAL 86 -3.970 0.950 4.559 1.00 0.00 C ATOM 642 C VAL 86 -5.086 0.117 5.130 1.00 0.00 C ATOM 643 O VAL 86 -5.063 -1.104 4.996 1.00 0.00 O ATOM 644 CB VAL 86 -4.071 0.986 3.023 1.00 0.00 C ATOM 645 CG1 VAL 86 -4.032 -0.425 2.454 1.00 0.00 C ATOM 646 CG2 VAL 86 -5.373 1.643 2.590 1.00 0.00 C ATOM 647 N ASN 87 -6.079 0.776 5.777 1.00 0.00 N ATOM 648 CA ASN 87 -7.274 0.153 6.316 1.00 0.00 C ATOM 649 C ASN 87 -8.401 1.067 5.916 1.00 0.00 C ATOM 650 O ASN 87 -8.204 2.280 5.953 1.00 0.00 O ATOM 651 CB ASN 87 -7.173 0.029 7.838 1.00 0.00 C ATOM 652 CG ASN 87 -8.349 -0.717 8.440 1.00 0.00 C ATOM 653 OD1 ASN 87 -9.468 -0.205 8.477 1.00 0.00 O ATOM 654 ND2 ASN 87 -8.095 -1.930 8.916 1.00 0.00 N ATOM 655 N LEU 88 -9.603 0.554 5.550 1.00 0.00 N ATOM 656 CA LEU 88 -10.501 1.300 4.690 1.00 0.00 C ATOM 657 C LEU 88 -11.920 0.903 5.016 1.00 0.00 C ATOM 658 O LEU 88 -12.138 -0.223 5.443 1.00 0.00 O ATOM 659 CB LEU 88 -10.212 0.992 3.219 1.00 0.00 C ATOM 660 CG LEU 88 -8.869 1.482 2.675 1.00 0.00 C ATOM 661 CD1 LEU 88 -8.605 0.904 1.293 1.00 0.00 C ATOM 662 CD2 LEU 88 -8.851 2.999 2.568 1.00 0.00 C ATOM 663 N LYS 89 -12.910 1.831 4.865 1.00 0.00 N ATOM 664 CA LYS 89 -14.036 1.886 5.769 1.00 0.00 C ATOM 665 C LYS 89 -15.332 1.172 5.417 1.00 0.00 C ATOM 666 O LYS 89 -15.877 0.579 6.341 1.00 0.00 O ATOM 667 CB LYS 89 -14.480 3.334 5.985 1.00 0.00 C ATOM 668 CG LYS 89 -15.652 3.488 6.940 1.00 0.00 C ATOM 669 CD LYS 89 -15.974 4.953 7.188 1.00 0.00 C ATOM 670 CE LYS 89 -17.092 5.108 8.204 1.00 0.00 C ATOM 671 NZ LYS 89 -17.298 6.531 8.592 1.00 0.00 N ATOM 672 N VAL 90 -15.919 1.274 4.185 1.00 0.00 N ATOM 673 CA VAL 90 -17.330 0.928 3.992 1.00 0.00 C ATOM 674 C VAL 90 -17.452 0.011 2.780 1.00 0.00 C ATOM 675 O VAL 90 -16.456 -0.243 2.103 1.00 0.00 O ATOM 676 CB VAL 90 -18.191 2.182 3.754 1.00 0.00 C ATOM 677 CG1 VAL 90 -18.142 3.100 4.965 1.00 0.00 C ATOM 678 CG2 VAL 90 -17.685 2.954 2.546 1.00 0.00 C ATOM 679 N THR 91 -18.691 -0.433 2.426 1.00 0.00 N ATOM 680 CA THR 91 -18.909 -1.554 1.568 1.00 0.00 C ATOM 681 C THR 91 -19.054 -1.065 0.157 1.00 0.00 C ATOM 682 O THR 91 -19.467 0.066 -0.113 1.00 0.00 O ATOM 683 CB THR 91 -20.183 -2.325 1.958 1.00 0.00 C ATOM 684 OG1 THR 91 -21.326 -1.476 1.801 1.00 0.00 O ATOM 685 CG2 THR 91 -20.106 -2.783 3.406 1.00 0.00 C ATOM 686 N GLN 92 -18.810 -1.997 -0.782 1.00 0.00 N ATOM 687 CA GLN 92 -19.435 -1.946 -2.068 1.00 0.00 C ATOM 688 C GLN 92 -20.181 -3.221 -2.119 1.00 0.00 C ATOM 689 O GLN 92 -19.799 -4.198 -1.473 1.00 0.00 O ATOM 690 CB GLN 92 -18.380 -1.846 -3.172 1.00 0.00 C ATOM 691 CG GLN 92 -17.452 -3.047 -3.254 1.00 0.00 C ATOM 692 CD GLN 92 -16.486 -2.959 -4.419 1.00 0.00 C ATOM 693 OE1 GLN 92 -16.653 -2.131 -5.315 1.00 0.00 O ATOM 694 NE2 GLN 92 -15.470 -3.814 -4.410 1.00 0.00 N ATOM 695 N LYS 93 -21.278 -3.226 -2.881 1.00 0.00 N ATOM 696 CA LYS 93 -22.168 -4.316 -2.750 1.00 0.00 C ATOM 697 C LYS 93 -22.202 -5.108 -3.957 1.00 0.00 C ATOM 698 O LYS 93 -22.563 -6.256 -3.741 1.00 0.00 O ATOM 699 CB LYS 93 -23.587 -3.818 -2.467 1.00 0.00 C ATOM 700 CG LYS 93 -23.735 -3.087 -1.143 1.00 0.00 C ATOM 701 CD LYS 93 -25.169 -2.634 -0.920 1.00 0.00 C ATOM 702 CE LYS 93 -25.310 -1.867 0.385 1.00 0.00 C ATOM 703 NZ LYS 93 -26.706 -1.402 0.608 1.00 0.00 N TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 644 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 61.93 55.9 170 100.0 170 ARMSMC SECONDARY STRUCTURE . . 59.39 52.8 106 100.0 106 ARMSMC SURFACE . . . . . . . . 58.86 61.2 116 100.0 116 ARMSMC BURIED . . . . . . . . 68.07 44.4 54 100.0 54 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.26 39.2 79 100.0 79 ARMSSC1 RELIABLE SIDE CHAINS . 89.75 40.9 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 94.83 35.3 51 100.0 51 ARMSSC1 SURFACE . . . . . . . . 91.04 37.5 56 100.0 56 ARMSSC1 BURIED . . . . . . . . 91.80 43.5 23 100.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 59.70 62.2 45 100.0 45 ARMSSC2 RELIABLE SIDE CHAINS . 58.21 66.7 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 69.66 61.5 26 100.0 26 ARMSSC2 SURFACE . . . . . . . . 57.32 60.0 35 100.0 35 ARMSSC2 BURIED . . . . . . . . 67.35 70.0 10 100.0 10 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 63.56 55.0 20 100.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 67.10 62.5 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 70.34 46.2 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 59.64 57.9 19 100.0 19 ARMSSC3 BURIED . . . . . . . . 114.95 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.35 50.0 10 100.0 10 ARMSSC4 RELIABLE SIDE CHAINS . 76.35 50.0 10 100.0 10 ARMSSC4 SECONDARY STRUCTURE . . 60.12 66.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 76.35 50.0 10 100.0 10 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 6.07 (Number of atoms: 86) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 6.07 86 100.0 86 CRMSCA CRN = ALL/NP . . . . . 0.0706 CRMSCA SECONDARY STRUCTURE . . 5.62 53 100.0 53 CRMSCA SURFACE . . . . . . . . 6.06 59 100.0 59 CRMSCA BURIED . . . . . . . . 6.08 27 100.0 27 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 6.17 426 100.0 426 CRMSMC SECONDARY STRUCTURE . . 5.75 264 100.0 264 CRMSMC SURFACE . . . . . . . . 6.16 292 100.0 292 CRMSMC BURIED . . . . . . . . 6.18 134 100.0 134 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 6.99 300 30.9 971 CRMSSC RELIABLE SIDE CHAINS . 7.16 246 26.8 917 CRMSSC SECONDARY STRUCTURE . . 6.77 191 30.6 625 CRMSSC SURFACE . . . . . . . . 6.96 219 33.6 651 CRMSSC BURIED . . . . . . . . 7.09 81 25.3 320 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.51 644 49.0 1315 CRMSALL SECONDARY STRUCTURE . . 6.20 403 48.1 837 CRMSALL SURFACE . . . . . . . . 6.51 455 51.3 887 CRMSALL BURIED . . . . . . . . 6.52 189 44.2 428 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.618 1.000 0.500 86 100.0 86 ERRCA SECONDARY STRUCTURE . . 5.246 1.000 0.500 53 100.0 53 ERRCA SURFACE . . . . . . . . 5.602 1.000 0.500 59 100.0 59 ERRCA BURIED . . . . . . . . 5.655 1.000 0.500 27 100.0 27 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.684 1.000 0.500 426 100.0 426 ERRMC SECONDARY STRUCTURE . . 5.332 1.000 0.500 264 100.0 264 ERRMC SURFACE . . . . . . . . 5.681 1.000 0.500 292 100.0 292 ERRMC BURIED . . . . . . . . 5.689 1.000 0.500 134 100.0 134 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.347 1.000 0.500 300 30.9 971 ERRSC RELIABLE SIDE CHAINS . 6.496 1.000 0.500 246 26.8 917 ERRSC SECONDARY STRUCTURE . . 6.190 1.000 0.500 191 30.6 625 ERRSC SURFACE . . . . . . . . 6.327 1.000 0.500 219 33.6 651 ERRSC BURIED . . . . . . . . 6.404 1.000 0.500 81 25.3 320 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.940 1.000 0.500 644 49.0 1315 ERRALL SECONDARY STRUCTURE . . 5.678 1.000 0.500 403 48.1 837 ERRALL SURFACE . . . . . . . . 5.943 1.000 0.500 455 51.3 887 ERRALL BURIED . . . . . . . . 5.933 1.000 0.500 189 44.2 428 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 4 9 38 79 86 86 DISTCA CA (P) 0.00 4.65 10.47 44.19 91.86 86 DISTCA CA (RMS) 0.00 1.73 2.35 3.94 5.39 DISTCA ALL (N) 3 21 62 252 576 644 1315 DISTALL ALL (P) 0.23 1.60 4.71 19.16 43.80 1315 DISTALL ALL (RMS) 0.73 1.57 2.29 3.82 5.55 DISTALL END of the results output