####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 86 ( 645), selected 86 , name T0572TS114_1-D1 # Molecule2: number of CA atoms 86 ( 1315), selected 86 , name T0572-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0572TS114_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 74 19 - 92 4.94 5.76 LONGEST_CONTINUOUS_SEGMENT: 74 20 - 93 4.99 5.73 LCS_AVERAGE: 78.34 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 64 - 90 1.87 7.69 LONGEST_CONTINUOUS_SEGMENT: 27 65 - 91 1.88 7.34 LCS_AVERAGE: 19.15 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 36 - 47 0.90 7.30 LCS_AVERAGE: 9.21 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 86 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 8 L 8 5 8 17 4 4 6 10 14 18 22 26 31 37 44 53 63 68 75 78 83 85 86 86 LCS_GDT S 9 S 9 5 8 21 4 4 5 7 14 18 22 26 31 37 50 58 66 72 75 78 83 85 86 86 LCS_GDT K 10 K 10 6 8 21 4 4 6 9 14 18 22 26 32 49 58 65 70 73 75 78 83 85 86 86 LCS_GDT S 11 S 11 6 8 21 4 5 6 9 14 18 22 26 31 44 58 65 70 73 75 78 83 85 86 86 LCS_GDT V 12 V 12 6 8 22 3 5 6 9 14 18 22 26 31 48 57 65 70 73 75 78 83 85 86 86 LCS_GDT P 13 P 13 6 8 22 3 5 6 8 13 18 22 26 31 42 57 65 70 73 75 78 83 85 86 86 LCS_GDT V 14 V 14 7 8 24 4 5 6 7 13 18 21 26 31 35 40 43 55 64 74 78 83 85 86 86 LCS_GDT K 15 K 15 7 8 24 4 5 6 9 14 18 21 25 31 35 39 45 55 64 69 78 83 85 86 86 LCS_GDT L 16 L 16 7 8 24 5 5 6 7 9 15 20 25 31 35 40 43 55 64 74 78 83 85 86 86 LCS_GDT E 17 E 17 7 8 24 5 5 6 7 12 18 21 25 31 38 41 47 55 61 68 78 83 85 86 86 LCS_GDT L 18 L 18 7 8 24 5 5 6 7 7 10 16 23 27 34 38 44 50 59 65 77 83 85 86 86 LCS_GDT T 19 T 19 7 8 74 5 5 6 9 13 20 23 26 30 35 41 45 55 60 67 77 83 85 86 86 LCS_GDT G 20 G 20 7 9 74 5 5 6 9 13 17 20 25 28 33 37 39 45 55 60 71 83 85 86 86 LCS_GDT D 21 D 21 7 9 74 4 6 7 12 16 19 21 26 30 34 38 44 55 59 72 78 83 85 86 86 LCS_GDT K 22 K 22 7 9 74 5 6 8 13 16 20 23 26 32 42 53 65 70 73 75 78 83 85 86 86 LCS_GDT A 23 A 23 7 9 74 5 6 8 13 16 20 23 31 38 48 54 65 70 73 75 78 83 85 86 86 LCS_GDT S 24 S 24 7 9 74 5 6 7 8 12 17 22 27 33 41 48 57 69 73 75 78 83 85 86 86 LCS_GDT N 25 N 25 7 9 74 5 6 8 13 16 20 23 31 38 47 54 63 69 73 75 78 83 85 86 86 LCS_GDT V 26 V 26 7 9 74 5 6 7 12 17 21 25 37 48 53 60 65 70 73 75 78 83 84 86 86 LCS_GDT S 27 S 27 7 9 74 3 6 7 7 9 13 20 23 28 51 57 65 69 73 75 78 83 85 86 86 LCS_GDT S 28 S 28 5 9 74 3 6 10 13 16 20 24 34 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT I 29 I 29 5 7 74 3 4 10 13 16 23 29 36 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT S 30 S 30 5 7 74 4 4 8 13 16 20 27 32 41 54 62 65 70 73 75 78 83 85 86 86 LCS_GDT Y 31 Y 31 5 7 74 4 4 8 13 16 20 29 36 44 54 62 65 70 73 75 78 83 85 86 86 LCS_GDT S 32 S 32 5 7 74 4 4 5 14 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT F 33 F 33 5 16 74 4 5 8 19 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT D 34 D 34 5 16 74 3 4 5 6 20 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT R 35 R 35 4 16 74 3 4 4 9 20 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT G 36 G 36 12 16 74 4 7 12 16 19 26 32 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT H 37 H 37 12 16 74 4 6 13 16 18 26 31 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 38 V 38 12 16 74 7 11 13 16 19 26 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT T 39 T 39 12 16 74 7 11 13 16 19 26 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT I 40 I 40 12 16 74 5 11 13 16 23 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 41 V 41 12 16 74 7 11 13 16 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT G 42 G 42 12 16 74 7 11 13 16 25 33 35 39 47 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT S 43 S 43 12 16 74 5 11 13 16 23 33 35 39 42 54 62 65 70 73 75 78 83 85 86 86 LCS_GDT Q 44 Q 44 12 16 74 7 11 13 16 19 33 35 39 42 54 62 65 70 73 75 78 83 85 86 86 LCS_GDT E 45 E 45 12 16 74 7 11 13 16 23 33 35 39 42 54 62 65 70 73 75 78 83 85 86 86 LCS_GDT A 46 A 46 12 16 74 7 11 13 16 25 33 35 39 45 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT M 47 M 47 12 16 74 7 11 13 16 25 33 35 39 47 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT D 48 D 48 11 16 74 7 11 13 20 25 33 35 39 42 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT K 49 K 49 3 14 74 3 12 19 22 25 28 31 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT I 50 I 50 3 4 74 3 3 7 17 25 28 30 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT D 51 D 51 3 10 74 3 3 4 17 25 28 31 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT S 52 S 52 4 11 74 3 4 6 7 11 15 21 29 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT I 53 I 53 5 12 74 3 4 6 11 13 18 23 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT T 54 T 54 9 14 74 4 8 10 13 18 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 55 V 55 9 14 74 4 8 10 13 15 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT P 56 P 56 9 14 74 4 8 9 13 17 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 57 V 57 9 14 74 4 8 10 13 17 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT D 58 D 58 9 14 74 4 8 10 13 17 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT I 59 I 59 9 14 74 4 8 9 13 17 21 25 35 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT S 60 S 60 9 14 74 3 8 10 13 17 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT Q 61 Q 61 9 14 74 4 8 10 13 17 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 62 V 62 9 14 74 4 7 9 13 17 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT T 63 T 63 9 14 74 4 7 9 13 17 21 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT E 64 E 64 9 27 74 3 7 9 13 17 25 29 38 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT D 65 D 65 9 27 74 3 7 12 20 25 28 33 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT T 66 T 66 10 27 74 3 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT S 67 S 67 10 27 74 4 12 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT K 68 K 68 10 27 74 6 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT T 69 T 69 10 27 74 6 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT L 70 L 70 10 27 74 6 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT E 71 E 71 10 27 74 5 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT L 72 L 72 10 27 74 5 12 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT K 73 K 73 10 27 74 4 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT A 74 A 74 10 27 74 6 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT E 75 E 75 10 27 74 4 13 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT G 76 G 76 6 27 74 4 6 9 21 25 28 33 39 42 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 77 V 77 6 27 74 4 6 14 23 25 28 33 39 44 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT T 78 T 78 6 27 74 4 8 19 23 25 28 32 39 47 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 79 V 79 6 27 74 4 9 17 23 25 28 32 39 48 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT Q 80 Q 80 6 27 74 4 6 14 23 25 26 30 37 45 52 60 65 66 73 75 77 81 85 86 86 LCS_GDT P 81 P 81 6 27 74 4 5 13 23 25 28 33 39 45 52 60 65 66 73 75 77 81 85 86 86 LCS_GDT S 82 S 82 9 27 74 4 13 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT T 83 T 83 9 27 74 7 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 84 V 84 9 27 74 7 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT K 85 K 85 9 27 74 7 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 86 V 86 9 27 74 7 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT N 87 N 87 9 27 74 5 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT L 88 L 88 9 27 74 7 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT K 89 K 89 9 27 74 7 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT V 90 V 90 9 27 74 4 10 19 22 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT T 91 T 91 4 27 74 4 5 11 17 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 LCS_GDT Q 92 Q 92 4 4 74 4 4 4 4 4 5 11 24 35 44 57 65 70 73 75 78 83 85 86 86 LCS_GDT K 93 K 93 4 4 74 4 4 4 4 4 8 10 20 28 36 44 50 57 62 71 78 83 85 86 86 LCS_AVERAGE LCS_A: 35.56 ( 9.21 19.15 78.34 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 14 19 23 25 33 35 39 49 56 62 65 70 73 75 78 83 85 86 86 GDT PERCENT_AT 8.14 16.28 22.09 26.74 29.07 38.37 40.70 45.35 56.98 65.12 72.09 75.58 81.40 84.88 87.21 90.70 96.51 98.84 100.00 100.00 GDT RMS_LOCAL 0.27 0.69 0.98 1.33 1.54 2.17 2.27 2.57 3.53 3.76 3.98 4.10 4.48 4.58 4.70 5.08 5.47 5.59 5.61 5.61 GDT RMS_ALL_AT 8.56 7.65 7.28 7.95 7.70 7.03 6.92 7.07 6.10 6.07 6.00 6.08 5.77 5.86 5.78 5.66 5.62 5.61 5.61 5.61 # Checking swapping # possible swapping detected: E 17 E 17 # possible swapping detected: Y 31 Y 31 # possible swapping detected: D 48 D 48 # possible swapping detected: D 58 D 58 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 8 L 8 9.200 0 0.049 1.343 13.130 3.690 2.202 LGA S 9 S 9 8.746 0 0.028 0.694 12.195 3.333 2.222 LGA K 10 K 10 8.014 0 0.073 1.247 12.407 3.929 2.222 LGA S 11 S 11 8.855 0 0.114 0.541 10.026 3.810 2.778 LGA V 12 V 12 9.786 0 0.113 0.921 11.449 0.595 0.340 LGA P 13 P 13 9.662 0 0.607 0.661 11.121 0.476 0.884 LGA V 14 V 14 12.854 0 0.202 0.277 14.418 0.000 0.000 LGA K 15 K 15 13.889 0 0.120 0.822 20.508 0.000 0.000 LGA L 16 L 16 13.305 0 0.085 1.065 15.310 0.000 0.000 LGA E 17 E 17 14.226 0 0.148 1.477 16.608 0.000 0.000 LGA L 18 L 18 14.185 0 0.042 0.984 14.818 0.000 0.000 LGA T 19 T 19 14.034 0 0.044 0.072 14.250 0.000 0.000 LGA G 20 G 20 14.098 0 0.113 0.113 14.176 0.000 0.000 LGA D 21 D 21 13.639 0 0.117 0.974 15.144 0.000 0.000 LGA K 22 K 22 10.162 0 0.129 1.018 12.329 0.000 1.429 LGA A 23 A 23 10.626 0 0.060 0.068 10.626 0.476 0.381 LGA S 24 S 24 11.920 0 0.105 0.653 16.000 0.000 0.000 LGA N 25 N 25 9.916 0 0.239 1.021 12.439 2.024 1.012 LGA V 26 V 26 7.377 0 0.563 0.591 8.817 11.310 9.728 LGA S 27 S 27 7.927 0 0.554 0.757 12.002 7.857 5.317 LGA S 28 S 28 6.014 0 0.069 0.665 6.460 17.143 22.222 LGA I 29 I 29 6.059 0 0.131 0.197 9.281 16.190 11.667 LGA S 30 S 30 6.281 0 0.533 0.528 8.397 18.214 14.603 LGA Y 31 Y 31 6.056 0 0.044 1.396 17.730 20.476 7.222 LGA S 32 S 32 3.364 0 0.044 0.741 3.880 48.452 47.857 LGA F 33 F 33 2.441 0 0.059 1.331 9.595 63.095 31.818 LGA D 34 D 34 2.718 0 0.558 0.458 6.170 56.071 42.679 LGA R 35 R 35 2.517 0 0.586 1.127 14.773 57.262 26.190 LGA G 36 G 36 5.046 0 0.640 0.640 5.511 29.286 29.286 LGA H 37 H 37 5.247 0 0.045 1.314 12.210 31.667 15.000 LGA V 38 V 38 3.746 0 0.073 0.162 5.105 40.238 37.347 LGA T 39 T 39 3.546 0 0.076 0.079 4.005 48.452 45.374 LGA I 40 I 40 2.781 0 0.048 1.099 4.712 53.571 59.345 LGA V 41 V 41 2.568 0 0.086 1.109 4.614 64.881 61.361 LGA G 42 G 42 2.308 0 0.043 0.043 3.252 59.167 59.167 LGA S 43 S 43 3.063 0 0.036 0.057 3.709 57.262 53.730 LGA Q 44 Q 44 3.226 0 0.062 1.204 8.656 55.476 37.302 LGA E 45 E 45 1.961 0 0.037 0.111 3.857 75.119 62.857 LGA A 46 A 46 1.229 0 0.030 0.038 1.512 79.286 79.714 LGA M 47 M 47 1.793 0 0.611 0.977 3.790 65.476 68.214 LGA D 48 D 48 1.153 0 0.651 1.198 6.773 63.333 44.702 LGA K 49 K 49 7.304 0 0.647 1.041 16.510 15.357 6.878 LGA I 50 I 50 8.087 0 0.584 1.008 10.606 11.667 6.250 LGA D 51 D 51 6.924 0 0.098 0.284 11.802 19.762 10.536 LGA S 52 S 52 6.491 0 0.599 0.930 8.893 17.143 13.571 LGA I 53 I 53 7.114 0 0.060 0.680 8.418 7.976 8.631 LGA T 54 T 54 8.089 0 0.167 1.064 10.685 7.262 6.463 LGA V 55 V 55 7.716 0 0.072 1.029 9.531 7.143 7.483 LGA P 56 P 56 7.939 0 0.087 0.172 8.696 7.143 5.578 LGA V 57 V 57 7.309 0 0.091 1.135 8.881 10.000 10.476 LGA D 58 D 58 7.910 0 0.157 1.303 8.790 8.571 8.095 LGA I 59 I 59 7.217 0 0.066 0.105 7.488 10.000 10.000 LGA S 60 S 60 7.880 0 0.033 0.072 8.604 7.143 6.032 LGA Q 61 Q 61 8.039 0 0.217 0.486 9.377 7.976 4.709 LGA V 62 V 62 6.123 0 0.115 0.185 6.735 16.190 19.116 LGA T 63 T 63 7.048 0 0.198 0.176 7.825 11.667 10.544 LGA E 64 E 64 6.448 0 0.029 0.387 10.470 22.976 12.963 LGA D 65 D 65 4.404 0 0.219 0.790 8.117 39.167 26.786 LGA T 66 T 66 2.974 0 0.091 0.973 3.631 51.905 52.109 LGA S 67 S 67 1.618 0 0.052 0.621 2.355 75.000 74.365 LGA K 68 K 68 0.895 0 0.075 1.103 4.619 90.476 78.413 LGA T 69 T 69 0.887 0 0.036 1.081 3.093 88.214 78.639 LGA L 70 L 70 0.653 0 0.136 0.162 1.328 90.476 88.214 LGA E 71 E 71 1.862 0 0.026 0.399 3.361 70.952 65.026 LGA L 72 L 72 2.640 0 0.097 0.101 3.169 60.952 59.107 LGA K 73 K 73 2.806 0 0.076 0.588 6.140 53.690 41.270 LGA A 74 A 74 2.569 0 0.128 0.154 2.569 64.881 63.333 LGA E 75 E 75 2.481 0 0.570 1.087 7.644 57.500 37.249 LGA G 76 G 76 3.795 0 0.702 0.702 4.426 43.452 43.452 LGA V 77 V 77 3.635 0 0.076 1.201 5.992 41.786 38.435 LGA T 78 T 78 4.378 0 0.138 0.130 5.251 38.690 34.830 LGA V 79 V 79 4.462 0 0.116 1.145 6.608 32.857 34.150 LGA Q 80 Q 80 4.949 0 0.060 0.892 9.085 31.429 19.048 LGA P 81 P 81 4.180 0 0.700 0.612 4.897 37.500 36.531 LGA S 82 S 82 1.809 0 0.323 0.882 2.812 75.119 69.127 LGA T 83 T 83 1.335 0 0.032 0.107 2.957 75.119 70.748 LGA V 84 V 84 1.547 0 0.028 0.096 1.717 75.000 74.082 LGA K 85 K 85 1.957 0 0.036 0.991 6.063 72.857 56.878 LGA V 86 V 86 1.755 0 0.101 0.109 1.956 72.857 75.306 LGA N 87 N 87 2.579 0 0.083 1.049 6.561 62.857 45.298 LGA L 88 L 88 1.923 0 0.109 0.930 3.791 70.833 69.345 LGA K 89 K 89 2.117 0 0.105 0.978 5.502 73.095 54.392 LGA V 90 V 90 1.583 0 0.590 0.614 3.832 73.214 62.381 LGA T 91 T 91 3.158 0 0.072 1.071 7.559 33.929 34.626 LGA Q 92 Q 92 9.895 0 0.077 1.195 14.938 2.619 1.164 LGA K 93 K 93 14.950 0 0.054 1.347 20.744 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 86 344 344 100.00 644 644 100.00 86 SUMMARY(RMSD_GDC): 5.612 5.530 6.505 33.744 29.277 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 86 86 4.0 39 2.57 44.767 40.486 1.461 LGA_LOCAL RMSD: 2.569 Number of atoms: 39 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.073 Number of assigned atoms: 86 Std_ASGN_ATOMS RMSD: 5.612 Standard rmsd on all 86 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.902594 * X + -0.355838 * Y + 0.242288 * Z + 38.720684 Y_new = 0.003652 * X + -0.556465 * Y + -0.830863 * Z + -11.254350 Z_new = 0.430478 * X + 0.750816 * Y + -0.500963 * Z + -4.555283 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.004046 -0.445022 2.159184 [DEG: 0.2318 -25.4979 123.7122 ] ZXZ: 0.283742 2.095507 0.520591 [DEG: 16.2572 120.0637 29.8276 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0572TS114_1-D1 REMARK 2: T0572-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0572TS114_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 86 86 4.0 39 2.57 40.486 5.61 REMARK ---------------------------------------------------------- MOLECULE T0572TS114_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0572 REMARK MODEL 1 REMARK PARENT 2kq1A 3lywA ATOM 60 N LEU 8 28.085 -4.924 0.112 1.00 27.00 N ATOM 61 CA LEU 8 26.674 -4.715 0.001 1.00 25.07 C ATOM 62 C LEU 8 26.455 -3.278 0.333 1.00 23.80 C ATOM 63 O LEU 8 27.203 -2.693 1.114 1.00 25.35 O ATOM 64 CB LEU 8 25.847 -5.553 0.992 1.00 27.05 C ATOM 65 CG LEU 8 25.997 -7.072 0.793 1.00 31.57 C ATOM 66 CD1 LEU 8 25.146 -7.849 1.812 1.00 45.46 C ATOM 67 CD2 LEU 8 25.721 -7.478 -0.664 1.00 42.06 C ATOM 68 N SER 9 25.433 -2.656 -0.282 1.00 22.42 N ATOM 69 CA SER 9 25.208 -1.267 -0.018 1.00 22.16 C ATOM 70 C SER 9 23.941 -1.153 0.769 1.00 21.93 C ATOM 71 O SER 9 23.004 -1.925 0.579 1.00 22.31 O ATOM 72 CB SER 9 25.028 -0.420 -1.292 1.00 22.45 C ATOM 73 OG SER 9 26.213 -0.452 -2.074 1.00 35.83 O ATOM 74 N LYS 10 23.907 -0.189 1.711 1.00 21.91 N ATOM 75 CA LYS 10 22.727 0.024 2.496 1.00 21.95 C ATOM 76 C LYS 10 22.570 1.500 2.653 1.00 21.77 C ATOM 77 O LYS 10 23.553 2.238 2.694 1.00 23.01 O ATOM 78 CB LYS 10 22.805 -0.586 3.909 1.00 24.52 C ATOM 79 CG LYS 10 23.922 0.007 4.772 1.00 39.85 C ATOM 80 CD LYS 10 23.847 -0.376 6.253 1.00 46.17 C ATOM 81 CE LYS 10 22.801 0.413 7.045 1.00 82.65 C ATOM 82 NZ LYS 10 22.800 -0.023 8.460 1.00 85.26 N ATOM 83 N SER 11 21.313 1.977 2.712 1.00 21.62 N ATOM 84 CA SER 11 21.090 3.379 2.900 1.00 21.85 C ATOM 85 C SER 11 19.749 3.523 3.538 1.00 21.82 C ATOM 86 O SER 11 18.920 2.617 3.460 1.00 21.75 O ATOM 87 CB SER 11 21.061 4.178 1.585 1.00 22.30 C ATOM 88 OG SER 11 19.976 3.746 0.778 1.00 36.46 O ATOM 89 N VAL 12 19.503 4.664 4.211 1.00 21.96 N ATOM 90 CA VAL 12 18.215 4.860 4.806 1.00 22.08 C ATOM 91 C VAL 12 17.476 5.779 3.890 1.00 22.35 C ATOM 92 O VAL 12 17.871 6.924 3.671 1.00 22.78 O ATOM 93 CB VAL 12 18.270 5.505 6.160 1.00 22.51 C ATOM 94 CG1 VAL 12 16.833 5.747 6.652 1.00 22.91 C ATOM 95 CG2 VAL 12 19.098 4.603 7.090 1.00 22.54 C ATOM 96 N PRO 13 16.418 5.277 3.322 1.00 22.19 N ATOM 97 CA PRO 13 15.660 6.059 2.393 1.00 22.48 C ATOM 98 C PRO 13 15.035 7.284 2.965 1.00 22.69 C ATOM 99 O PRO 13 15.114 8.316 2.303 1.00 23.03 O ATOM 100 CB PRO 13 14.667 5.091 1.752 1.00 22.30 C ATOM 101 CG PRO 13 15.397 3.736 1.817 1.00 22.09 C ATOM 102 CD PRO 13 16.316 3.852 3.047 1.00 21.90 C ATOM 103 N VAL 14 14.419 7.168 4.163 1.00 22.54 N ATOM 104 CA VAL 14 13.724 8.190 4.908 1.00 22.73 C ATOM 105 C VAL 14 12.300 7.749 4.972 1.00 22.42 C ATOM 106 O VAL 14 11.979 6.619 4.607 1.00 22.16 O ATOM 107 CB VAL 14 13.707 9.602 4.370 1.00 23.24 C ATOM 108 CG1 VAL 14 15.142 10.156 4.311 1.00 23.61 C ATOM 109 CG2 VAL 14 12.876 9.660 3.076 1.00 23.27 C ATOM 110 N LYS 15 11.406 8.628 5.464 1.00 22.50 N ATOM 111 CA LYS 15 10.015 8.281 5.506 1.00 22.44 C ATOM 112 C LYS 15 9.519 8.296 4.096 1.00 22.34 C ATOM 113 O LYS 15 9.883 9.168 3.307 1.00 22.58 O ATOM 114 CB LYS 15 9.147 9.264 6.315 1.00 23.50 C ATOM 115 CG LYS 15 9.425 9.251 7.822 1.00 27.63 C ATOM 116 CD LYS 15 8.803 10.435 8.568 1.00 43.56 C ATOM 117 CE LYS 15 9.072 10.439 10.076 1.00 85.79 C ATOM 118 NZ LYS 15 8.315 9.353 10.738 1.00 92.86 N ATOM 119 N LEU 16 8.682 7.305 3.735 1.00 22.22 N ATOM 120 CA LEU 16 8.151 7.236 2.406 1.00 22.29 C ATOM 121 C LEU 16 6.665 7.324 2.520 1.00 22.10 C ATOM 122 O LEU 16 6.082 6.915 3.523 1.00 21.92 O ATOM 123 CB LEU 16 8.472 5.911 1.690 1.00 22.51 C ATOM 124 CG LEU 16 9.974 5.683 1.446 1.00 23.19 C ATOM 125 CD1 LEU 16 10.226 4.351 0.725 1.00 23.89 C ATOM 126 CD2 LEU 16 10.610 6.874 0.714 1.00 23.77 C ATOM 127 N GLU 17 6.010 7.888 1.488 1.00 22.27 N ATOM 128 CA GLU 17 4.585 7.995 1.527 1.00 22.35 C ATOM 129 C GLU 17 4.038 6.631 1.275 1.00 21.66 C ATOM 130 O GLU 17 4.629 5.841 0.540 1.00 21.88 O ATOM 131 CB GLU 17 3.998 8.921 0.448 1.00 24.57 C ATOM 132 CG GLU 17 4.445 10.378 0.575 1.00 38.10 C ATOM 133 CD GLU 17 5.820 10.495 -0.062 1.00 51.88 C ATOM 134 OE1 GLU 17 6.275 9.491 -0.673 1.00 64.12 O ATOM 135 OE2 GLU 17 6.432 11.591 0.049 1.00 67.85 O ATOM 136 N LEU 18 2.888 6.315 1.895 1.00 21.28 N ATOM 137 CA LEU 18 2.313 5.026 1.673 1.00 20.91 C ATOM 138 C LEU 18 1.310 5.214 0.587 1.00 20.81 C ATOM 139 O LEU 18 0.411 6.047 0.692 1.00 20.70 O ATOM 140 CB LEU 18 1.606 4.459 2.922 1.00 21.05 C ATOM 141 CG LEU 18 1.006 3.047 2.758 1.00 21.37 C ATOM 142 CD1 LEU 18 -0.225 3.037 1.838 1.00 21.90 C ATOM 143 CD2 LEU 18 2.082 2.039 2.328 1.00 22.51 C ATOM 144 N THR 19 1.450 4.443 -0.508 1.00 20.95 N ATOM 145 CA THR 19 0.535 4.603 -1.595 1.00 20.92 C ATOM 146 C THR 19 -0.255 3.343 -1.696 1.00 20.70 C ATOM 147 O THR 19 0.290 2.245 -1.596 1.00 21.03 O ATOM 148 CB THR 19 1.215 4.811 -2.915 1.00 21.44 C ATOM 149 OG1 THR 19 2.053 5.957 -2.861 1.00 21.84 O ATOM 150 CG2 THR 19 0.140 4.992 -3.999 1.00 21.53 C ATOM 151 N GLY 20 -1.580 3.478 -1.891 1.00 20.35 N ATOM 152 CA GLY 20 -2.395 2.309 -2.001 1.00 20.35 C ATOM 153 C GLY 20 -2.927 2.281 -3.393 1.00 20.94 C ATOM 154 O GLY 20 -3.399 3.292 -3.913 1.00 21.20 O ATOM 155 N ASP 21 -2.863 1.098 -4.033 1.00 21.42 N ATOM 156 CA ASP 21 -3.346 0.966 -5.374 1.00 22.31 C ATOM 157 C ASP 21 -4.736 0.436 -5.278 1.00 22.22 C ATOM 158 O ASP 21 -4.944 -0.720 -4.915 1.00 22.20 O ATOM 159 CB ASP 21 -2.520 -0.014 -6.226 1.00 23.52 C ATOM 160 CG ASP 21 -3.018 0.041 -7.664 1.00 25.17 C ATOM 161 OD1 ASP 21 -4.040 0.734 -7.915 1.00 25.24 O ATOM 162 OD2 ASP 21 -2.382 -0.614 -8.532 1.00 28.73 O ATOM 163 N LYS 22 -5.729 1.282 -5.607 1.00 22.44 N ATOM 164 CA LYS 22 -7.099 0.884 -5.482 1.00 22.69 C ATOM 165 C LYS 22 -7.845 1.327 -6.695 1.00 23.59 C ATOM 166 O LYS 22 -7.332 2.074 -7.526 1.00 24.09 O ATOM 167 CB LYS 22 -7.790 1.541 -4.278 1.00 22.41 C ATOM 168 CG LYS 22 -7.675 3.067 -4.281 1.00 23.48 C ATOM 169 CD LYS 22 -8.554 3.760 -3.237 1.00 24.93 C ATOM 170 CE LYS 22 -8.327 5.272 -3.160 1.00 28.22 C ATOM 171 NZ LYS 22 -9.221 5.869 -2.142 1.00 31.69 N ATOM 172 N ALA 23 -9.093 0.837 -6.821 1.00 23.94 N ATOM 173 CA ALA 23 -9.947 1.215 -7.905 1.00 24.96 C ATOM 174 C ALA 23 -11.058 1.998 -7.288 1.00 24.86 C ATOM 175 O ALA 23 -11.496 1.705 -6.177 1.00 24.14 O ATOM 176 CB ALA 23 -10.573 0.019 -8.641 1.00 25.63 C ATOM 177 N SER 24 -11.528 3.039 -7.996 1.00 25.78 N ATOM 178 CA SER 24 -12.565 3.871 -7.462 1.00 26.04 C ATOM 179 C SER 24 -13.800 3.048 -7.295 1.00 26.03 C ATOM 180 O SER 24 -14.507 3.170 -6.297 1.00 25.88 O ATOM 181 CB SER 24 -12.920 5.049 -8.387 1.00 27.49 C ATOM 182 OG SER 24 -11.811 5.928 -8.507 1.00 74.76 O ATOM 183 N ASN 25 -14.085 2.170 -8.272 1.00 26.46 N ATOM 184 CA ASN 25 -15.292 1.399 -8.230 1.00 26.74 C ATOM 185 C ASN 25 -15.283 0.483 -7.049 1.00 25.59 C ATOM 186 O ASN 25 -16.287 0.362 -6.349 1.00 25.51 O ATOM 187 CB ASN 25 -15.483 0.511 -9.472 1.00 27.90 C ATOM 188 CG ASN 25 -15.759 1.409 -10.668 1.00 36.97 C ATOM 189 OD1 ASN 25 -14.985 1.441 -11.624 1.00 57.06 O ATOM 190 ND2 ASN 25 -16.894 2.156 -10.622 1.00 60.30 N ATOM 191 N VAL 26 -14.143 -0.181 -6.781 1.00 24.87 N ATOM 192 CA VAL 26 -14.127 -1.180 -5.752 1.00 24.06 C ATOM 193 C VAL 26 -14.485 -0.604 -4.417 1.00 23.54 C ATOM 194 O VAL 26 -15.449 -1.052 -3.796 1.00 23.52 O ATOM 195 CB VAL 26 -12.783 -1.832 -5.604 1.00 23.75 C ATOM 196 CG1 VAL 26 -12.844 -2.817 -4.424 1.00 23.37 C ATOM 197 CG2 VAL 26 -12.401 -2.483 -6.944 1.00 24.66 C ATOM 198 N SER 27 -13.750 0.420 -3.937 1.00 23.36 N ATOM 199 CA SER 27 -14.082 0.914 -2.630 1.00 23.41 C ATOM 200 C SER 27 -13.228 2.102 -2.320 1.00 23.12 C ATOM 201 O SER 27 -12.523 2.623 -3.182 1.00 23.18 O ATOM 202 CB SER 27 -13.843 -0.113 -1.515 1.00 23.49 C ATOM 203 OG SER 27 -12.454 -0.382 -1.413 1.00 25.10 O ATOM 204 N SER 28 -13.294 2.565 -1.052 1.00 23.38 N ATOM 205 CA SER 28 -12.535 3.698 -0.599 1.00 23.69 C ATOM 206 C SER 28 -11.738 3.247 0.584 1.00 22.47 C ATOM 207 O SER 28 -11.916 2.133 1.073 1.00 22.21 O ATOM 208 CB SER 28 -13.402 4.883 -0.135 1.00 28.34 C ATOM 209 OG SER 28 -14.145 5.401 -1.228 1.00 78.00 O ATOM 210 N ILE 29 -10.812 4.099 1.071 1.00 22.28 N ATOM 211 CA ILE 29 -10.010 3.653 2.170 1.00 21.49 C ATOM 212 C ILE 29 -10.412 4.374 3.410 1.00 22.18 C ATOM 213 O ILE 29 -10.260 5.589 3.529 1.00 22.93 O ATOM 214 CB ILE 29 -8.543 3.844 1.938 1.00 21.67 C ATOM 215 CG1 ILE 29 -8.116 2.972 0.747 1.00 22.56 C ATOM 216 CG2 ILE 29 -7.788 3.518 3.237 1.00 22.08 C ATOM 217 CD1 ILE 29 -6.681 3.209 0.298 1.00 32.42 C ATOM 218 N SER 30 -10.995 3.610 4.355 1.00 22.24 N ATOM 219 CA SER 30 -11.407 4.133 5.621 1.00 22.95 C ATOM 220 C SER 30 -10.189 4.472 6.420 1.00 22.78 C ATOM 221 O SER 30 -10.015 5.610 6.855 1.00 23.80 O ATOM 222 CB SER 30 -12.238 3.123 6.433 1.00 23.84 C ATOM 223 OG SER 30 -12.623 3.688 7.678 1.00 28.69 O ATOM 224 N TYR 31 -9.295 3.480 6.607 1.00 22.01 N ATOM 225 CA TYR 31 -8.120 3.691 7.405 1.00 22.40 C ATOM 226 C TYR 31 -6.941 3.248 6.603 1.00 20.89 C ATOM 227 O TYR 31 -7.031 2.313 5.810 1.00 21.45 O ATOM 228 CB TYR 31 -8.078 2.838 8.685 1.00 26.31 C ATOM 229 CG TYR 31 -9.189 3.241 9.593 1.00 31.42 C ATOM 230 CD1 TYR 31 -10.458 2.740 9.417 1.00 34.73 C ATOM 231 CD2 TYR 31 -8.951 4.108 10.633 1.00 42.87 C ATOM 232 CE1 TYR 31 -11.479 3.108 10.262 1.00 40.49 C ATOM 233 CE2 TYR 31 -9.966 4.480 11.481 1.00 50.92 C ATOM 234 CZ TYR 31 -11.230 3.975 11.298 1.00 46.23 C ATOM 235 OH TYR 31 -12.274 4.353 12.168 1.00 54.73 H ATOM 236 N SER 32 -5.798 3.931 6.790 1.00 20.61 N ATOM 237 CA SER 32 -4.606 3.549 6.092 1.00 20.00 C ATOM 238 C SER 32 -3.449 3.972 6.934 1.00 20.07 C ATOM 239 O SER 32 -3.604 4.746 7.878 1.00 20.61 O ATOM 240 CB SER 32 -4.449 4.226 4.720 1.00 21.51 C ATOM 241 OG SER 32 -4.286 5.628 4.877 1.00 29.75 O ATOM 242 N PHE 33 -2.249 3.449 6.621 1.00 20.11 N ATOM 243 CA PHE 33 -1.082 3.799 7.372 1.00 20.46 C ATOM 244 C PHE 33 -0.532 5.052 6.775 1.00 20.39 C ATOM 245 O PHE 33 -0.760 5.350 5.603 1.00 20.46 O ATOM 246 CB PHE 33 0.014 2.715 7.328 1.00 20.91 C ATOM 247 CG PHE 33 1.080 3.054 8.317 1.00 22.05 C ATOM 248 CD1 PHE 33 0.916 2.742 9.648 1.00 23.02 C ATOM 249 CD2 PHE 33 2.246 3.664 7.920 1.00 23.43 C ATOM 250 CE1 PHE 33 1.889 3.046 10.571 1.00 24.40 C ATOM 251 CE2 PHE 33 3.224 3.970 8.839 1.00 24.74 C ATOM 252 CZ PHE 33 3.051 3.661 10.167 1.00 24.91 C ATOM 253 N ASP 34 0.193 5.833 7.595 1.00 20.78 N ATOM 254 CA ASP 34 0.778 7.057 7.140 1.00 21.45 C ATOM 255 C ASP 34 2.102 6.714 6.548 1.00 21.08 C ATOM 256 O ASP 34 2.288 5.628 6.000 1.00 20.97 O ATOM 257 CB ASP 34 1.000 8.091 8.257 1.00 23.39 C ATOM 258 CG ASP 34 -0.356 8.665 8.645 1.00 26.88 C ATOM 259 OD1 ASP 34 -1.273 8.665 7.781 1.00 32.23 O ATOM 260 OD2 ASP 34 -0.493 9.116 9.813 1.00 32.09 O ATOM 261 N ARG 35 3.052 7.664 6.612 1.00 21.45 N ATOM 262 CA ARG 35 4.356 7.455 6.060 1.00 21.76 C ATOM 263 C ARG 35 5.046 6.416 6.887 1.00 21.49 C ATOM 264 O ARG 35 4.737 6.233 8.064 1.00 21.39 O ATOM 265 CB ARG 35 5.224 8.725 6.090 1.00 23.24 C ATOM 266 CG ARG 35 4.641 9.886 5.278 1.00 27.76 C ATOM 267 CD ARG 35 5.355 11.220 5.514 1.00 32.98 C ATOM 268 NE ARG 35 4.688 12.252 4.672 1.00 45.02 N ATOM 269 CZ ARG 35 5.273 12.689 3.518 1.00 56.89 C ATOM 270 NH1 ARG 35 6.485 12.195 3.134 1.00 75.91 H ATOM 271 NH2 ARG 35 4.647 13.633 2.759 1.00 71.50 H ATOM 272 N GLY 36 5.991 5.684 6.264 1.00 21.60 N ATOM 273 CA GLY 36 6.724 4.675 6.969 1.00 21.45 C ATOM 274 C GLY 36 8.173 4.995 6.798 1.00 21.54 C ATOM 275 O GLY 36 8.555 5.700 5.866 1.00 21.72 O ATOM 276 N HIS 37 9.021 4.471 7.704 1.00 21.48 N ATOM 277 CA HIS 37 10.431 4.731 7.646 1.00 21.70 C ATOM 278 C HIS 37 11.074 3.513 7.077 1.00 21.62 C ATOM 279 O HIS 37 10.687 2.392 7.404 1.00 21.50 O ATOM 280 CB HIS 37 11.048 4.971 9.035 1.00 22.16 C ATOM 281 CG HIS 37 12.500 5.337 9.013 1.00 23.42 C ATOM 282 ND1 HIS 37 13.527 4.420 8.993 1.00 25.24 N ATOM 283 CD2 HIS 37 13.097 6.561 9.027 1.00 25.98 C ATOM 284 CE1 HIS 37 14.685 5.127 8.999 1.00 26.23 C ATOM 285 NE2 HIS 37 14.473 6.432 9.020 1.00 26.99 N ATOM 286 N VAL 38 12.070 3.695 6.187 1.00 21.83 N ATOM 287 CA VAL 38 12.658 2.526 5.610 1.00 21.77 C ATOM 288 C VAL 38 14.144 2.667 5.579 1.00 21.80 C ATOM 289 O VAL 38 14.685 3.748 5.351 1.00 22.01 O ATOM 290 CB VAL 38 12.207 2.284 4.202 1.00 21.81 C ATOM 291 CG1 VAL 38 12.644 3.475 3.334 1.00 22.14 C ATOM 292 CG2 VAL 38 12.785 0.941 3.730 1.00 21.78 C ATOM 293 N THR 39 14.837 1.542 5.841 1.00 21.64 N ATOM 294 CA THR 39 16.263 1.463 5.740 1.00 21.69 C ATOM 295 C THR 39 16.481 0.334 4.794 1.00 21.58 C ATOM 296 O THR 39 15.825 -0.700 4.915 1.00 21.52 O ATOM 297 CB THR 39 16.936 1.112 7.033 1.00 21.82 C ATOM 298 OG1 THR 39 16.651 2.098 8.015 1.00 22.08 O ATOM 299 CG2 THR 39 18.452 1.018 6.795 1.00 21.99 C ATOM 300 N ILE 40 17.386 0.481 3.812 1.00 21.69 N ATOM 301 CA ILE 40 17.476 -0.595 2.873 1.00 21.68 C ATOM 302 C ILE 40 18.881 -1.086 2.783 1.00 21.56 C ATOM 303 O ILE 40 19.837 -0.311 2.797 1.00 21.56 O ATOM 304 CB ILE 40 17.062 -0.203 1.485 1.00 21.94 C ATOM 305 CG1 ILE 40 15.604 0.286 1.474 1.00 22.34 C ATOM 306 CG2 ILE 40 17.312 -1.404 0.560 1.00 22.37 C ATOM 307 CD1 ILE 40 15.203 0.972 0.169 1.00 22.73 C ATOM 308 N VAL 41 19.023 -2.422 2.715 1.00 21.60 N ATOM 309 CA VAL 41 20.297 -3.045 2.523 1.00 21.70 C ATOM 310 C VAL 41 20.120 -3.919 1.329 1.00 21.80 C ATOM 311 O VAL 41 19.049 -4.489 1.130 1.00 22.06 O ATOM 312 CB VAL 41 20.717 -3.921 3.665 1.00 22.44 C ATOM 313 CG1 VAL 41 20.922 -3.038 4.906 1.00 23.03 C ATOM 314 CG2 VAL 41 19.654 -5.018 3.851 1.00 22.98 C ATOM 315 N GLY 42 21.159 -4.042 0.481 1.00 21.92 N ATOM 316 CA GLY 42 20.985 -4.859 -0.681 1.00 22.30 C ATOM 317 C GLY 42 22.061 -4.517 -1.655 1.00 22.41 C ATOM 318 O GLY 42 23.055 -3.882 -1.308 1.00 22.05 O ATOM 319 N SER 43 21.878 -4.943 -2.919 1.00 23.22 N ATOM 320 CA SER 43 22.869 -4.686 -3.919 1.00 23.46 C ATOM 321 C SER 43 22.858 -3.224 -4.217 1.00 22.99 C ATOM 322 O SER 43 21.832 -2.556 -4.098 1.00 23.24 O ATOM 323 CB SER 43 22.622 -5.437 -5.242 1.00 24.85 C ATOM 324 OG SER 43 22.715 -6.840 -5.035 1.00 28.80 O ATOM 325 N GLN 44 24.033 -2.689 -4.598 1.00 22.69 N ATOM 326 CA GLN 44 24.155 -1.296 -4.909 1.00 22.70 C ATOM 327 C GLN 44 23.351 -1.008 -6.133 1.00 23.39 C ATOM 328 O GLN 44 22.656 0.004 -6.207 1.00 23.55 O ATOM 329 CB GLN 44 25.597 -0.867 -5.220 1.00 23.44 C ATOM 330 CG GLN 44 25.709 0.620 -5.559 1.00 28.43 C ATOM 331 CD GLN 44 27.166 0.944 -5.850 1.00 31.04 C ATOM 332 OE1 GLN 44 27.705 1.918 -5.330 1.00 51.96 O ATOM 333 NE2 GLN 44 27.824 0.112 -6.704 1.00 50.85 N ATOM 334 N GLU 45 23.419 -1.915 -7.123 1.00 24.14 N ATOM 335 CA GLU 45 22.743 -1.716 -8.370 1.00 25.27 C ATOM 336 C GLU 45 21.279 -1.661 -8.092 1.00 25.02 C ATOM 337 O GLU 45 20.552 -0.846 -8.657 1.00 25.64 O ATOM 338 CB GLU 45 22.956 -2.888 -9.340 1.00 27.32 C ATOM 339 CG GLU 45 24.411 -3.074 -9.768 1.00 37.95 C ATOM 340 CD GLU 45 24.496 -4.359 -10.581 1.00 83.39 C ATOM 341 OE1 GLU 45 23.426 -4.984 -10.812 1.00 96.82 O ATOM 342 OE2 GLU 45 25.631 -4.735 -10.980 1.00 90.50 O ATOM 343 N ALA 46 20.821 -2.533 -7.181 1.00 24.39 N ATOM 344 CA ALA 46 19.427 -2.653 -6.892 1.00 24.52 C ATOM 345 C ALA 46 18.903 -1.356 -6.365 1.00 24.08 C ATOM 346 O ALA 46 17.812 -0.929 -6.740 1.00 24.43 O ATOM 347 CB ALA 46 19.136 -3.734 -5.834 1.00 24.36 C ATOM 348 N MET 47 19.674 -0.672 -5.501 1.00 23.39 N ATOM 349 CA MET 47 19.143 0.510 -4.891 1.00 23.05 C ATOM 350 C MET 47 18.832 1.525 -5.942 1.00 23.18 C ATOM 351 O MET 47 19.686 1.914 -6.736 1.00 23.38 O ATOM 352 CB MET 47 20.106 1.155 -3.879 1.00 22.93 C ATOM 353 CG MET 47 19.518 2.365 -3.153 1.00 25.12 C ATOM 354 SD MET 47 18.217 1.959 -1.952 1.00 31.25 S ATOM 355 CE MET 47 19.342 1.114 -0.804 1.00 38.26 C ATOM 356 N ASP 48 17.558 1.962 -5.965 1.00 23.31 N ATOM 357 CA ASP 48 17.092 2.975 -6.864 1.00 23.71 C ATOM 358 C ASP 48 17.159 4.262 -6.111 1.00 23.45 C ATOM 359 O ASP 48 17.712 4.321 -5.014 1.00 23.20 O ATOM 360 CB ASP 48 15.626 2.783 -7.290 1.00 24.91 C ATOM 361 CG ASP 48 15.534 1.541 -8.165 1.00 27.95 C ATOM 362 OD1 ASP 48 16.609 1.002 -8.541 1.00 28.05 O ATOM 363 OD2 ASP 48 14.388 1.118 -8.473 1.00 38.09 O ATOM 364 N LYS 49 16.607 5.345 -6.691 1.00 23.81 N ATOM 365 CA LYS 49 16.606 6.586 -5.976 1.00 23.98 C ATOM 366 C LYS 49 15.560 6.484 -4.917 1.00 23.57 C ATOM 367 O LYS 49 14.518 5.862 -5.114 1.00 23.50 O ATOM 368 CB LYS 49 16.346 7.820 -6.855 1.00 25.24 C ATOM 369 CG LYS 49 17.550 8.141 -7.742 1.00 40.77 C ATOM 370 CD LYS 49 17.283 9.181 -8.829 1.00 56.34 C ATOM 371 CE LYS 49 18.512 9.474 -9.693 1.00 76.92 C ATOM 372 NZ LYS 49 18.190 10.495 -10.715 1.00 92.91 N ATOM 373 N ILE 50 15.841 7.080 -3.741 1.00 23.47 N ATOM 374 CA ILE 50 14.946 6.988 -2.625 1.00 23.25 C ATOM 375 C ILE 50 13.663 7.669 -2.968 1.00 23.30 C ATOM 376 O ILE 50 12.584 7.115 -2.762 1.00 23.13 O ATOM 377 CB ILE 50 15.487 7.664 -1.399 1.00 23.52 C ATOM 378 CG1 ILE 50 16.809 7.012 -0.968 1.00 23.97 C ATOM 379 CG2 ILE 50 14.396 7.618 -0.313 1.00 23.49 C ATOM 380 CD1 ILE 50 16.674 5.532 -0.613 1.00 24.11 C ATOM 381 N ASP 51 13.746 8.890 -3.525 1.00 23.66 N ATOM 382 CA ASP 51 12.547 9.614 -3.831 1.00 23.91 C ATOM 383 C ASP 51 11.802 8.844 -4.866 1.00 23.90 C ATOM 384 O ASP 51 10.579 8.722 -4.810 1.00 23.91 O ATOM 385 CB ASP 51 12.805 11.021 -4.403 1.00 24.80 C ATOM 386 CG ASP 51 13.322 11.917 -3.283 1.00 28.58 C ATOM 387 OD1 ASP 51 13.604 11.384 -2.178 1.00 35.38 O ATOM 388 OD2 ASP 51 13.432 13.148 -3.520 1.00 38.27 O ATOM 389 N SER 52 12.542 8.282 -5.835 1.00 24.00 N ATOM 390 CA SER 52 11.934 7.561 -6.911 1.00 24.16 C ATOM 391 C SER 52 11.202 6.395 -6.329 1.00 23.66 C ATOM 392 O SER 52 10.115 6.043 -6.783 1.00 23.64 O ATOM 393 CB SER 52 12.976 7.009 -7.901 1.00 24.75 C ATOM 394 OG SER 52 13.713 8.077 -8.480 1.00 35.50 O ATOM 395 N ILE 53 11.777 5.780 -5.280 1.00 23.38 N ATOM 396 CA ILE 53 11.183 4.610 -4.709 1.00 23.03 C ATOM 397 C ILE 53 10.117 5.015 -3.744 1.00 22.73 C ATOM 398 O ILE 53 10.318 5.876 -2.891 1.00 22.79 O ATOM 399 CB ILE 53 12.167 3.760 -3.958 1.00 23.41 C ATOM 400 CG1 ILE 53 13.273 3.262 -4.904 1.00 24.63 C ATOM 401 CG2 ILE 53 11.397 2.625 -3.264 1.00 22.98 C ATOM 402 CD1 ILE 53 14.477 2.655 -4.182 1.00 28.17 C ATOM 403 N THR 54 8.932 4.392 -3.889 1.00 22.60 N ATOM 404 CA THR 54 7.829 4.630 -3.009 1.00 22.48 C ATOM 405 C THR 54 7.384 3.276 -2.570 1.00 22.36 C ATOM 406 O THR 54 7.777 2.274 -3.162 1.00 22.58 O ATOM 407 CB THR 54 6.666 5.298 -3.682 1.00 22.72 C ATOM 408 OG1 THR 54 6.171 4.478 -4.728 1.00 22.93 O ATOM 409 CG2 THR 54 7.132 6.653 -4.243 1.00 23.19 C ATOM 410 N VAL 55 6.588 3.198 -1.486 1.00 22.14 N ATOM 411 CA VAL 55 6.135 1.903 -1.072 1.00 22.04 C ATOM 412 C VAL 55 4.665 1.803 -1.341 1.00 21.87 C ATOM 413 O VAL 55 3.828 2.359 -0.633 1.00 21.67 O ATOM 414 CB VAL 55 6.393 1.633 0.386 1.00 21.97 C ATOM 415 CG1 VAL 55 7.912 1.488 0.584 1.00 22.25 C ATOM 416 CG2 VAL 55 5.799 2.784 1.220 1.00 21.93 C ATOM 417 N PRO 56 4.355 1.116 -2.406 1.00 22.00 N ATOM 418 CA PRO 56 2.975 0.912 -2.757 1.00 21.85 C ATOM 419 C PRO 56 2.448 -0.368 -2.196 1.00 21.84 C ATOM 420 O PRO 56 3.236 -1.204 -1.755 1.00 22.10 O ATOM 421 CB PRO 56 2.908 0.948 -4.284 1.00 22.27 C ATOM 422 CG PRO 56 4.345 0.651 -4.734 1.00 26.25 C ATOM 423 CD PRO 56 5.195 1.218 -3.588 1.00 22.47 C ATOM 424 N VAL 57 1.111 -0.527 -2.201 1.00 21.63 N ATOM 425 CA VAL 57 0.484 -1.754 -1.807 1.00 21.74 C ATOM 426 C VAL 57 -0.616 -1.957 -2.801 1.00 21.78 C ATOM 427 O VAL 57 -1.209 -0.986 -3.266 1.00 21.52 O ATOM 428 CB VAL 57 -0.136 -1.692 -0.444 1.00 21.47 C ATOM 429 CG1 VAL 57 -0.792 -3.047 -0.143 1.00 22.49 C ATOM 430 CG2 VAL 57 0.950 -1.289 0.568 1.00 21.66 C ATOM 431 N ASP 58 -0.914 -3.219 -3.176 1.00 22.38 N ATOM 432 CA ASP 58 -1.949 -3.426 -4.152 1.00 22.79 C ATOM 433 C ASP 58 -3.153 -3.985 -3.456 1.00 22.47 C ATOM 434 O ASP 58 -3.301 -5.197 -3.302 1.00 22.86 O ATOM 435 CB ASP 58 -1.544 -4.397 -5.276 1.00 24.27 C ATOM 436 CG ASP 58 -2.560 -4.272 -6.405 1.00 25.33 C ATOM 437 OD1 ASP 58 -3.675 -3.746 -6.140 1.00 24.86 O ATOM 438 OD2 ASP 58 -2.236 -4.692 -7.547 1.00 28.25 O ATOM 439 N ILE 59 -4.036 -3.073 -3.011 1.00 21.81 N ATOM 440 CA ILE 59 -5.260 -3.311 -2.296 1.00 21.47 C ATOM 441 C ILE 59 -6.332 -3.903 -3.156 1.00 22.04 C ATOM 442 O ILE 59 -7.271 -4.492 -2.628 1.00 21.95 O ATOM 443 CB ILE 59 -5.817 -2.111 -1.580 1.00 20.68 C ATOM 444 CG1 ILE 59 -6.273 -1.009 -2.539 1.00 21.15 C ATOM 445 CG2 ILE 59 -4.748 -1.641 -0.579 1.00 20.50 C ATOM 446 CD1 ILE 59 -7.090 0.069 -1.830 1.00 21.91 C ATOM 447 N SER 60 -6.253 -3.718 -4.490 1.00 22.71 N ATOM 448 CA SER 60 -7.314 -4.064 -5.401 1.00 23.32 C ATOM 449 C SER 60 -7.834 -5.442 -5.126 1.00 23.66 C ATOM 450 O SER 60 -9.025 -5.696 -5.298 1.00 23.81 O ATOM 451 CB SER 60 -6.858 -4.040 -6.869 1.00 24.47 C ATOM 452 OG SER 60 -6.418 -2.739 -7.223 1.00 30.92 O ATOM 453 N GLN 61 -6.974 -6.366 -4.668 1.00 24.07 N ATOM 454 CA GLN 61 -7.434 -7.701 -4.410 1.00 24.80 C ATOM 455 C GLN 61 -8.490 -7.653 -3.348 1.00 23.83 C ATOM 456 O GLN 61 -9.544 -8.274 -3.484 1.00 24.08 O ATOM 457 CB GLN 61 -6.316 -8.603 -3.866 1.00 26.90 C ATOM 458 CG GLN 61 -5.152 -8.812 -4.834 1.00 44.44 C ATOM 459 CD GLN 61 -4.066 -9.574 -4.086 1.00 59.37 C ATOM 460 OE1 GLN 61 -3.723 -9.231 -2.956 1.00 76.13 O ATOM 461 NE2 GLN 61 -3.513 -10.638 -4.725 1.00 81.99 N ATOM 462 N VAL 62 -8.257 -6.884 -2.266 1.00 22.94 N ATOM 463 CA VAL 62 -9.206 -6.876 -1.191 1.00 22.45 C ATOM 464 C VAL 62 -10.326 -5.963 -1.549 1.00 22.11 C ATOM 465 O VAL 62 -10.296 -4.771 -1.252 1.00 21.52 O ATOM 466 CB VAL 62 -8.627 -6.385 0.104 1.00 22.06 C ATOM 467 CG1 VAL 62 -9.747 -6.311 1.156 1.00 22.00 C ATOM 468 CG2 VAL 62 -7.460 -7.307 0.497 1.00 22.87 C ATOM 469 N THR 63 -11.345 -6.521 -2.225 1.00 22.67 N ATOM 470 CA THR 63 -12.523 -5.789 -2.579 1.00 22.63 C ATOM 471 C THR 63 -13.332 -5.572 -1.341 1.00 22.22 C ATOM 472 O THR 63 -13.933 -4.516 -1.153 1.00 22.10 O ATOM 473 CB THR 63 -13.392 -6.518 -3.560 1.00 23.43 C ATOM 474 OG1 THR 63 -13.862 -7.731 -2.991 1.00 23.76 O ATOM 475 CG2 THR 63 -12.568 -6.815 -4.822 1.00 24.13 C ATOM 476 N GLU 64 -13.336 -6.583 -0.448 1.00 22.39 N ATOM 477 CA GLU 64 -14.175 -6.585 0.715 1.00 22.65 C ATOM 478 C GLU 64 -13.856 -5.427 1.596 1.00 22.08 C ATOM 479 O GLU 64 -12.731 -4.932 1.632 1.00 21.64 O ATOM 480 CB GLU 64 -14.051 -7.854 1.580 1.00 24.22 C ATOM 481 CG GLU 64 -14.597 -9.120 0.917 1.00 28.95 C ATOM 482 CD GLU 64 -14.414 -10.275 1.893 1.00 38.21 C ATOM 483 OE1 GLU 64 -14.924 -10.167 3.040 1.00 58.03 O ATOM 484 OE2 GLU 64 -13.754 -11.279 1.510 1.00 71.91 O ATOM 485 N ASP 65 -14.892 -4.955 2.317 1.00 22.51 N ATOM 486 CA ASP 65 -14.736 -3.853 3.215 1.00 22.63 C ATOM 487 C ASP 65 -14.425 -4.429 4.556 1.00 22.80 C ATOM 488 O ASP 65 -15.307 -4.592 5.398 1.00 23.55 O ATOM 489 CB ASP 65 -16.017 -3.016 3.373 1.00 23.66 C ATOM 490 CG ASP 65 -16.294 -2.320 2.050 1.00 24.78 C ATOM 491 OD1 ASP 65 -15.337 -2.184 1.242 1.00 24.22 O ATOM 492 OD2 ASP 65 -17.467 -1.914 1.830 1.00 29.79 O ATOM 493 N THR 66 -13.145 -4.774 4.775 1.00 22.33 N ATOM 494 CA THR 66 -12.739 -5.286 6.045 1.00 22.82 C ATOM 495 C THR 66 -11.365 -4.762 6.277 1.00 22.31 C ATOM 496 O THR 66 -10.720 -4.267 5.355 1.00 21.79 O ATOM 497 CB THR 66 -12.676 -6.785 6.095 1.00 23.29 C ATOM 498 OG1 THR 66 -11.720 -7.274 5.165 1.00 22.93 O ATOM 499 CG2 THR 66 -14.071 -7.339 5.765 1.00 23.87 C ATOM 500 N SER 67 -10.888 -4.816 7.534 1.00 22.57 N ATOM 501 CA SER 67 -9.551 -4.368 7.764 1.00 22.28 C ATOM 502 C SER 67 -8.662 -5.449 7.255 1.00 22.14 C ATOM 503 O SER 67 -8.927 -6.631 7.465 1.00 22.71 O ATOM 504 CB SER 67 -9.216 -4.143 9.249 1.00 22.94 C ATOM 505 OG SER 67 -7.876 -3.694 9.387 1.00 25.28 O ATOM 506 N LYS 68 -7.577 -5.076 6.554 1.00 21.61 N ATOM 507 CA LYS 68 -6.700 -6.088 6.051 1.00 21.90 C ATOM 508 C LYS 68 -5.305 -5.626 6.292 1.00 21.64 C ATOM 509 O LYS 68 -5.047 -4.429 6.386 1.00 21.40 O ATOM 510 CB LYS 68 -6.853 -6.339 4.542 1.00 22.24 C ATOM 511 CG LYS 68 -8.211 -6.935 4.166 1.00 26.60 C ATOM 512 CD LYS 68 -8.497 -8.266 4.863 1.00 34.97 C ATOM 513 CE LYS 68 -7.531 -9.382 4.463 1.00 46.68 C ATOM 514 NZ LYS 68 -7.713 -10.549 5.352 1.00 70.09 N ATOM 515 N THR 69 -4.363 -6.581 6.414 1.00 22.10 N ATOM 516 CA THR 69 -3.002 -6.200 6.638 1.00 22.27 C ATOM 517 C THR 69 -2.239 -6.556 5.407 1.00 22.30 C ATOM 518 O THR 69 -2.361 -7.663 4.886 1.00 22.96 O ATOM 519 CB THR 69 -2.359 -6.920 7.789 1.00 23.96 C ATOM 520 OG1 THR 69 -2.302 -8.315 7.528 1.00 26.14 O ATOM 521 CG2 THR 69 -3.183 -6.653 9.060 1.00 26.82 C ATOM 522 N LEU 70 -1.447 -5.597 4.895 1.00 21.95 N ATOM 523 CA LEU 70 -0.660 -5.832 3.724 1.00 22.25 C ATOM 524 C LEU 70 0.725 -5.394 4.059 1.00 22.20 C ATOM 525 O LEU 70 0.920 -4.559 4.941 1.00 22.01 O ATOM 526 CB LEU 70 -1.151 -5.030 2.507 1.00 22.47 C ATOM 527 CG LEU 70 -2.581 -5.429 2.084 1.00 23.79 C ATOM 528 CD1 LEU 70 -3.064 -4.629 0.867 1.00 25.84 C ATOM 529 CD2 LEU 70 -2.694 -6.944 1.869 1.00 24.75 C ATOM 530 N GLU 71 1.732 -5.968 3.374 1.00 22.64 N ATOM 531 CA GLU 71 3.083 -5.630 3.697 1.00 22.76 C ATOM 532 C GLU 71 3.728 -5.014 2.499 1.00 22.60 C ATOM 533 O GLU 71 3.515 -5.445 1.366 1.00 22.90 O ATOM 534 CB GLU 71 3.914 -6.863 4.082 1.00 24.39 C ATOM 535 CG GLU 71 3.965 -7.901 2.959 1.00 28.41 C ATOM 536 CD GLU 71 4.572 -9.183 3.512 1.00 34.96 C ATOM 537 OE1 GLU 71 4.812 -9.242 4.747 1.00 46.50 O ATOM 538 OE2 GLU 71 4.794 -10.126 2.706 1.00 47.20 O ATOM 539 N LEU 72 4.526 -3.957 2.737 1.00 22.35 N ATOM 540 CA LEU 72 5.257 -3.314 1.689 1.00 22.36 C ATOM 541 C LEU 72 6.394 -4.231 1.391 1.00 22.65 C ATOM 542 O LEU 72 6.848 -4.961 2.270 1.00 22.84 O ATOM 543 CB LEU 72 5.853 -1.963 2.114 1.00 22.24 C ATOM 544 CG LEU 72 4.795 -0.917 2.510 1.00 22.29 C ATOM 545 CD1 LEU 72 5.454 0.406 2.925 1.00 22.39 C ATOM 546 CD2 LEU 72 3.746 -0.729 1.403 1.00 22.50 C ATOM 547 N LYS 73 6.880 -4.243 0.136 1.00 22.79 N ATOM 548 CA LYS 73 7.943 -5.159 -0.144 1.00 23.34 C ATOM 549 C LYS 73 9.042 -4.452 -0.864 1.00 22.74 C ATOM 550 O LYS 73 8.881 -3.330 -1.343 1.00 22.62 O ATOM 551 CB LYS 73 7.517 -6.356 -1.010 1.00 25.83 C ATOM 552 CG LYS 73 6.531 -7.280 -0.294 1.00 29.20 C ATOM 553 CD LYS 73 5.901 -8.337 -1.201 1.00 39.09 C ATOM 554 CE LYS 73 6.866 -9.463 -1.576 1.00 55.92 C ATOM 555 NZ LYS 73 6.180 -10.459 -2.428 1.00 64.55 N ATOM 556 N ALA 74 10.219 -5.108 -0.910 1.00 22.67 N ATOM 557 CA ALA 74 11.368 -4.588 -1.586 1.00 22.46 C ATOM 558 C ALA 74 12.220 -5.769 -1.916 1.00 22.58 C ATOM 559 O ALA 74 12.024 -6.854 -1.374 1.00 22.78 O ATOM 560 CB ALA 74 12.219 -3.640 -0.724 1.00 22.15 C ATOM 561 N GLU 75 13.182 -5.592 -2.842 1.00 22.67 N ATOM 562 CA GLU 75 14.046 -6.683 -3.184 1.00 23.03 C ATOM 563 C GLU 75 14.789 -7.016 -1.933 1.00 22.84 C ATOM 564 O GLU 75 14.923 -8.179 -1.558 1.00 23.17 O ATOM 565 CB GLU 75 15.070 -6.295 -4.266 1.00 24.00 C ATOM 566 CG GLU 75 15.901 -7.465 -4.794 1.00 51.20 C ATOM 567 CD GLU 75 16.845 -6.923 -5.861 1.00 53.79 C ATOM 568 OE1 GLU 75 16.899 -5.674 -6.023 1.00 42.34 O ATOM 569 OE2 GLU 75 17.523 -7.751 -6.527 1.00 80.51 O ATOM 570 N GLY 76 15.266 -5.964 -1.246 1.00 22.48 N ATOM 571 CA GLY 76 15.948 -6.095 0.005 1.00 22.32 C ATOM 572 C GLY 76 15.598 -4.843 0.729 1.00 22.09 C ATOM 573 O GLY 76 15.526 -3.778 0.120 1.00 22.05 O ATOM 574 N VAL 77 15.348 -4.922 2.049 1.00 22.03 N ATOM 575 CA VAL 77 14.977 -3.698 2.691 1.00 21.92 C ATOM 576 C VAL 77 14.676 -3.991 4.124 1.00 21.94 C ATOM 577 O VAL 77 14.706 -5.137 4.567 1.00 22.13 O ATOM 578 CB VAL 77 13.738 -3.092 2.084 1.00 22.07 C ATOM 579 CG1 VAL 77 12.536 -3.975 2.448 1.00 22.37 C ATOM 580 CG2 VAL 77 13.600 -1.628 2.533 1.00 22.17 C ATOM 581 N THR 78 14.436 -2.915 4.896 1.00 21.81 N ATOM 582 CA THR 78 13.988 -2.983 6.252 1.00 21.87 C ATOM 583 C THR 78 12.940 -1.923 6.321 1.00 21.76 C ATOM 584 O THR 78 13.147 -0.815 5.825 1.00 21.69 O ATOM 585 CB THR 78 15.052 -2.636 7.253 1.00 22.03 C ATOM 586 OG1 THR 78 16.153 -3.521 7.120 1.00 22.29 O ATOM 587 CG2 THR 78 14.455 -2.741 8.666 1.00 22.26 C ATOM 588 N VAL 79 11.768 -2.219 6.910 1.00 21.86 N ATOM 589 CA VAL 79 10.778 -1.185 6.896 1.00 21.81 C ATOM 590 C VAL 79 9.976 -1.263 8.148 1.00 21.72 C ATOM 591 O VAL 79 9.891 -2.310 8.786 1.00 21.91 O ATOM 592 CB VAL 79 9.824 -1.305 5.746 1.00 22.03 C ATOM 593 CG1 VAL 79 9.030 -2.613 5.906 1.00 22.31 C ATOM 594 CG2 VAL 79 8.950 -0.041 5.691 1.00 22.13 C ATOM 595 N GLN 80 9.385 -0.121 8.546 1.00 21.52 N ATOM 596 CA GLN 80 8.557 -0.112 9.712 1.00 21.57 C ATOM 597 C GLN 80 7.516 0.933 9.491 1.00 21.33 C ATOM 598 O GLN 80 7.830 2.060 9.113 1.00 21.31 O ATOM 599 CB GLN 80 9.325 0.283 10.985 1.00 22.12 C ATOM 600 CG GLN 80 8.480 0.269 12.259 1.00 24.35 C ATOM 601 CD GLN 80 8.291 -1.179 12.683 1.00 26.39 C ATOM 602 OE1 GLN 80 8.297 -2.087 11.854 1.00 36.75 O ATOM 603 NE2 GLN 80 8.130 -1.406 14.014 1.00 44.59 N ATOM 604 N PRO 81 6.275 0.595 9.695 1.00 21.35 N ATOM 605 CA PRO 81 5.942 -0.762 10.021 1.00 21.56 C ATOM 606 C PRO 81 5.983 -1.554 8.756 1.00 21.63 C ATOM 607 O PRO 81 5.722 -0.988 7.695 1.00 21.59 O ATOM 608 CB PRO 81 4.554 -0.712 10.654 1.00 22.02 C ATOM 609 CG PRO 81 4.471 0.704 11.248 1.00 40.87 C ATOM 610 CD PRO 81 5.379 1.544 10.337 1.00 21.47 C ATOM 611 N SER 82 6.318 -2.853 8.837 1.00 21.84 N ATOM 612 CA SER 82 6.361 -3.675 7.665 1.00 21.99 C ATOM 613 C SER 82 4.962 -3.871 7.181 1.00 21.98 C ATOM 614 O SER 82 4.694 -3.825 5.981 1.00 22.04 O ATOM 615 CB SER 82 6.959 -5.063 7.949 1.00 22.37 C ATOM 616 OG SER 82 8.316 -4.933 8.350 1.00 32.27 O ATOM 617 N THR 83 4.020 -4.072 8.120 1.00 22.00 N ATOM 618 CA THR 83 2.673 -4.338 7.715 1.00 22.04 C ATOM 619 C THR 83 1.846 -3.139 8.019 1.00 21.67 C ATOM 620 O THR 83 2.050 -2.461 9.024 1.00 21.61 O ATOM 621 CB THR 83 2.050 -5.499 8.432 1.00 22.59 C ATOM 622 OG1 THR 83 1.979 -5.234 9.825 1.00 22.82 O ATOM 623 CG2 THR 83 2.902 -6.753 8.169 1.00 23.31 C ATOM 624 N VAL 84 0.894 -2.836 7.118 1.00 21.55 N ATOM 625 CA VAL 84 0.032 -1.714 7.320 1.00 21.21 C ATOM 626 C VAL 84 -1.365 -2.232 7.290 1.00 21.04 C ATOM 627 O VAL 84 -1.659 -3.218 6.617 1.00 21.31 O ATOM 628 CB VAL 84 0.152 -0.668 6.250 1.00 21.06 C ATOM 629 CG1 VAL 84 1.569 -0.069 6.305 1.00 21.43 C ATOM 630 CG2 VAL 84 -0.202 -1.310 4.897 1.00 21.18 C ATOM 631 N LYS 85 -2.270 -1.588 8.051 1.00 20.94 N ATOM 632 CA LYS 85 -3.623 -2.050 8.045 1.00 21.16 C ATOM 633 C LYS 85 -4.414 -1.087 7.228 1.00 20.46 C ATOM 634 O LYS 85 -4.256 0.129 7.347 1.00 20.65 O ATOM 635 CB LYS 85 -4.261 -2.126 9.445 1.00 23.85 C ATOM 636 CG LYS 85 -3.651 -3.212 10.336 1.00 33.42 C ATOM 637 CD LYS 85 -4.071 -3.117 11.806 1.00 44.25 C ATOM 638 CE LYS 85 -3.466 -4.212 12.688 1.00 64.24 C ATOM 639 NZ LYS 85 -2.018 -3.970 12.877 1.00 87.79 N ATOM 640 N VAL 86 -5.273 -1.623 6.342 1.00 20.39 N ATOM 641 CA VAL 86 -6.084 -0.773 5.526 1.00 20.13 C ATOM 642 C VAL 86 -7.496 -1.232 5.678 1.00 20.37 C ATOM 643 O VAL 86 -7.764 -2.423 5.831 1.00 20.70 O ATOM 644 CB VAL 86 -5.748 -0.847 4.066 1.00 20.37 C ATOM 645 CG1 VAL 86 -6.745 0.023 3.282 1.00 20.62 C ATOM 646 CG2 VAL 86 -4.284 -0.415 3.886 1.00 21.07 C ATOM 647 N ASN 87 -8.443 -0.277 5.669 1.00 20.64 N ATOM 648 CA ASN 87 -9.825 -0.629 5.784 1.00 21.28 C ATOM 649 C ASN 87 -10.510 -0.037 4.597 1.00 21.15 C ATOM 650 O ASN 87 -10.221 1.090 4.201 1.00 21.08 O ATOM 651 CB ASN 87 -10.489 -0.054 7.051 1.00 22.40 C ATOM 652 CG ASN 87 -11.884 -0.644 7.197 1.00 23.04 C ATOM 653 OD1 ASN 87 -12.694 -0.599 6.271 1.00 23.80 O ATOM 654 ND2 ASN 87 -12.176 -1.219 8.395 1.00 25.96 N ATOM 655 N LEU 88 -11.428 -0.799 3.973 1.00 21.35 N ATOM 656 CA LEU 88 -12.118 -0.269 2.839 1.00 21.50 C ATOM 657 C LEU 88 -13.520 0.001 3.274 1.00 22.43 C ATOM 658 O LEU 88 -14.184 -0.873 3.832 1.00 23.03 O ATOM 659 CB LEU 88 -12.137 -1.238 1.647 1.00 21.42 C ATOM 660 CG LEU 88 -10.725 -1.506 1.084 1.00 21.57 C ATOM 661 CD1 LEU 88 -9.825 -2.203 2.117 1.00 22.18 C ATOM 662 CD2 LEU 88 -10.784 -2.270 -0.243 1.00 21.68 C ATOM 663 N LYS 89 -14.004 1.237 3.038 1.00 23.07 N ATOM 664 CA LYS 89 -15.315 1.582 3.501 1.00 25.32 C ATOM 665 C LYS 89 -16.050 2.274 2.398 1.00 24.57 C ATOM 666 O LYS 89 -15.450 2.885 1.514 1.00 25.43 O ATOM 667 CB LYS 89 -15.270 2.521 4.717 1.00 32.56 C ATOM 668 CG LYS 89 -16.600 2.680 5.451 1.00 38.86 C ATOM 669 CD LYS 89 -16.434 3.282 6.848 1.00 48.27 C ATOM 670 CE LYS 89 -15.550 2.431 7.765 1.00 33.99 C ATOM 671 NZ LYS 89 -15.387 3.088 9.081 1.00 63.89 N ATOM 672 N VAL 90 -17.392 2.161 2.424 1.00 25.44 N ATOM 673 CA VAL 90 -18.239 2.753 1.430 1.00 26.04 C ATOM 674 C VAL 90 -18.140 4.243 1.497 1.00 27.06 C ATOM 675 O VAL 90 -17.943 4.906 0.480 1.00 27.48 O ATOM 676 CB VAL 90 -19.683 2.399 1.633 1.00 27.29 C ATOM 677 CG1 VAL 90 -20.525 3.159 0.596 1.00 30.06 C ATOM 678 CG2 VAL 90 -19.827 0.870 1.556 1.00 29.15 C ATOM 679 N THR 91 -18.252 4.819 2.709 1.00 28.09 N ATOM 680 CA THR 91 -18.229 6.250 2.786 1.00 29.51 C ATOM 681 C THR 91 -16.973 6.656 3.467 1.00 28.81 C ATOM 682 O THR 91 -16.597 6.095 4.495 1.00 28.83 O ATOM 683 CB THR 91 -19.365 6.834 3.575 1.00 32.30 C ATOM 684 OG1 THR 91 -19.307 6.394 4.924 1.00 33.62 O ATOM 685 CG2 THR 91 -20.687 6.393 2.927 1.00 34.78 C ATOM 686 N GLN 92 -16.278 7.653 2.890 1.00 29.05 N ATOM 687 CA GLN 92 -15.068 8.099 3.503 1.00 29.51 C ATOM 688 C GLN 92 -15.417 9.210 4.429 1.00 32.37 C ATOM 689 O GLN 92 -16.355 9.972 4.196 1.00 38.91 O ATOM 690 CB GLN 92 -13.999 8.599 2.514 1.00 35.18 C ATOM 691 CG GLN 92 -14.393 9.841 1.715 1.00 47.49 C ATOM 692 CD GLN 92 -13.221 10.179 0.803 1.00 51.65 C ATOM 693 OE1 GLN 92 -13.396 10.750 -0.273 1.00 74.23 O ATOM 694 NE2 GLN 92 -11.985 9.810 1.241 1.00 60.55 N ATOM 695 N LYS 93 -14.665 9.301 5.536 1.00 34.48 N ATOM 696 CA LYS 93 -14.894 10.309 6.523 1.00 40.61 C ATOM 697 C LYS 93 -14.459 11.608 5.868 1.00 62.10 C ATOM 698 O LYS 93 -13.349 11.611 5.270 1.00 76.74 O ATOM 699 CB LYS 93 -14.020 10.095 7.769 1.00 69.09 C ATOM 700 CG LYS 93 -14.092 8.661 8.301 1.00 87.30 C ATOM 701 CD LYS 93 -15.500 8.205 8.686 1.00 96.32 C ATOM 702 CE LYS 93 -15.640 6.684 8.795 1.00 99.12 C ATOM 703 NZ LYS 93 -14.684 6.148 9.787 1.00 99.81 N ATOM 704 OXT LYS 93 -15.220 12.608 5.951 1.00 81.69 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 644 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 60.75 65.3 170 100.0 170 ARMSMC SECONDARY STRUCTURE . . 51.11 72.6 106 100.0 106 ARMSMC SURFACE . . . . . . . . 57.79 64.7 116 100.0 116 ARMSMC BURIED . . . . . . . . 66.68 66.7 54 100.0 54 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.17 46.8 79 100.0 79 ARMSSC1 RELIABLE SIDE CHAINS . 86.33 45.5 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 87.33 45.1 51 100.0 51 ARMSSC1 SURFACE . . . . . . . . 90.03 39.3 56 100.0 56 ARMSSC1 BURIED . . . . . . . . 71.99 65.2 23 100.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.62 60.0 45 100.0 45 ARMSSC2 RELIABLE SIDE CHAINS . 62.24 66.7 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 72.77 61.5 26 100.0 26 ARMSSC2 SURFACE . . . . . . . . 68.20 62.9 35 100.0 35 ARMSSC2 BURIED . . . . . . . . 86.33 50.0 10 100.0 10 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.50 35.0 20 100.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 77.87 43.8 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 95.52 30.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 84.30 36.8 19 100.0 19 ARMSSC3 BURIED . . . . . . . . 120.91 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.23 40.0 10 100.0 10 ARMSSC4 RELIABLE SIDE CHAINS . 83.23 40.0 10 100.0 10 ARMSSC4 SECONDARY STRUCTURE . . 89.96 33.3 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 83.23 40.0 10 100.0 10 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.61 (Number of atoms: 86) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.61 86 100.0 86 CRMSCA CRN = ALL/NP . . . . . 0.0653 CRMSCA SECONDARY STRUCTURE . . 5.48 53 100.0 53 CRMSCA SURFACE . . . . . . . . 5.90 59 100.0 59 CRMSCA BURIED . . . . . . . . 4.92 27 100.0 27 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.68 426 100.0 426 CRMSMC SECONDARY STRUCTURE . . 5.58 264 100.0 264 CRMSMC SURFACE . . . . . . . . 5.96 292 100.0 292 CRMSMC BURIED . . . . . . . . 5.01 134 100.0 134 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.48 300 30.9 971 CRMSSC RELIABLE SIDE CHAINS . 7.50 246 26.8 917 CRMSSC SECONDARY STRUCTURE . . 7.27 191 30.6 625 CRMSSC SURFACE . . . . . . . . 8.04 219 33.6 651 CRMSSC BURIED . . . . . . . . 5.71 81 25.3 320 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.51 644 49.0 1315 CRMSALL SECONDARY STRUCTURE . . 6.36 403 48.1 837 CRMSALL SURFACE . . . . . . . . 6.96 455 51.3 887 CRMSALL BURIED . . . . . . . . 5.27 189 44.2 428 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 17.711 0.636 0.696 86 100.0 86 ERRCA SECONDARY STRUCTURE . . 17.532 0.639 0.698 53 100.0 53 ERRCA SURFACE . . . . . . . . 17.665 0.623 0.687 59 100.0 59 ERRCA BURIED . . . . . . . . 17.814 0.665 0.717 27 100.0 27 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.013 0.636 0.696 426 100.0 426 ERRMC SECONDARY STRUCTURE . . 17.648 0.637 0.697 264 100.0 264 ERRMC SURFACE . . . . . . . . 18.119 0.626 0.689 292 100.0 292 ERRMC BURIED . . . . . . . . 17.781 0.659 0.711 134 100.0 134 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 27.061 0.650 0.707 300 30.9 971 ERRSC RELIABLE SIDE CHAINS . 27.751 0.657 0.713 246 26.8 917 ERRSC SECONDARY STRUCTURE . . 26.225 0.651 0.709 191 30.6 625 ERRSC SURFACE . . . . . . . . 30.388 0.656 0.713 219 33.6 651 ERRSC BURIED . . . . . . . . 18.065 0.633 0.693 81 25.3 320 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 22.164 0.645 0.703 644 49.0 1315 ERRALL SECONDARY STRUCTURE . . 21.665 0.645 0.704 403 48.1 837 ERRALL SURFACE . . . . . . . . 23.920 0.642 0.702 455 51.3 887 ERRALL BURIED . . . . . . . . 17.937 0.650 0.705 189 44.2 428 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 2 8 41 86 86 86 DISTCA CA (P) 1.16 2.33 9.30 47.67 100.00 86 DISTCA CA (RMS) 0.99 1.08 2.10 3.70 5.61 DISTCA ALL (N) 1 13 59 292 591 644 1315 DISTALL ALL (P) 0.08 0.99 4.49 22.21 44.94 1315 DISTALL ALL (RMS) 0.99 1.40 2.32 3.80 5.69 DISTALL END of the results output