####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 86 ( 645), selected 86 , name T0572TS113_1-D1 # Molecule2: number of CA atoms 86 ( 1315), selected 86 , name T0572-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0572TS113_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 86 8 - 93 3.79 3.79 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 65 - 90 1.95 5.02 LONGEST_CONTINUOUS_SEGMENT: 26 66 - 91 1.97 4.97 LCS_AVERAGE: 25.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 38 - 52 0.94 6.75 LCS_AVERAGE: 11.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 86 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 8 L 8 3 15 86 0 5 9 16 21 28 38 46 56 62 77 83 85 86 86 86 86 86 86 86 LCS_GDT S 9 S 9 12 16 86 3 10 20 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 10 K 10 12 16 86 7 10 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 11 S 11 12 16 86 6 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 12 V 12 12 16 86 7 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT P 13 P 13 12 16 86 7 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 14 V 14 12 16 86 7 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 15 K 15 12 16 86 7 9 22 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT L 16 L 16 12 16 86 7 9 19 29 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT E 17 E 17 12 16 86 7 9 12 29 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT L 18 L 18 12 16 86 4 9 15 29 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT T 19 T 19 12 16 86 3 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT G 20 G 20 12 16 86 3 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT D 21 D 21 12 16 86 3 5 9 14 16 32 43 55 69 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 22 K 22 5 16 86 3 5 10 23 34 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT A 23 A 23 5 16 86 3 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 24 S 24 5 16 86 3 5 7 13 25 37 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT N 25 N 25 5 13 86 3 4 6 9 19 22 38 46 67 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 26 V 26 5 13 86 3 5 7 9 16 23 40 57 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 27 S 27 6 22 86 3 4 6 8 18 32 40 48 62 75 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 28 S 28 6 24 86 3 5 13 18 24 32 42 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT I 29 I 29 7 24 86 3 7 13 20 24 32 42 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 30 S 30 7 24 86 3 7 13 20 24 32 42 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT Y 31 Y 31 7 24 86 3 7 13 20 24 32 49 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 32 S 32 7 24 86 5 6 13 20 24 32 42 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT F 33 F 33 7 24 86 2 8 13 20 24 36 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT D 34 D 34 7 24 86 3 8 13 20 24 37 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT R 35 R 35 7 24 86 3 6 13 18 24 32 42 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT G 36 G 36 5 24 86 3 5 13 18 23 32 42 61 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT H 37 H 37 5 24 86 2 5 13 18 24 32 42 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 38 V 38 15 24 86 4 10 14 20 24 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT T 39 T 39 15 24 86 7 11 14 20 24 39 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT I 40 I 40 15 24 86 4 11 14 16 22 37 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 41 V 41 15 24 86 4 11 14 16 22 31 47 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT G 42 G 42 15 24 86 3 9 14 18 24 32 49 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 43 S 43 15 24 86 7 11 14 20 24 39 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT Q 44 Q 44 15 24 86 7 11 14 20 24 39 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT E 45 E 45 15 24 86 7 11 14 20 24 39 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT A 46 A 46 15 24 86 7 11 14 20 24 39 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT M 47 M 47 15 24 86 7 11 14 20 25 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT D 48 D 48 15 24 86 7 11 14 20 24 39 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 49 K 49 15 24 86 7 11 14 19 24 32 49 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT I 50 I 50 15 24 86 7 11 14 19 24 32 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT D 51 D 51 15 24 86 4 8 13 16 24 32 46 61 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 52 S 52 15 22 86 7 11 14 16 24 32 49 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT I 53 I 53 11 22 86 5 7 12 17 24 32 46 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT T 54 T 54 9 22 86 5 6 12 16 24 32 44 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 55 V 55 9 20 86 5 7 10 16 24 32 42 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT P 56 P 56 9 20 86 5 6 10 16 24 32 42 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 57 V 57 9 20 86 5 7 10 16 24 32 42 60 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT D 58 D 58 7 20 86 5 6 10 16 23 32 40 56 68 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT I 59 I 59 7 20 86 5 7 10 12 19 32 42 49 68 75 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 60 S 60 7 20 86 5 6 10 12 16 22 36 43 51 66 79 81 85 86 86 86 86 86 86 86 LCS_GDT Q 61 Q 61 4 20 86 3 7 13 20 24 35 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 62 V 62 4 20 86 3 8 13 20 24 37 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT T 63 T 63 3 20 86 3 6 13 20 24 32 48 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT E 64 E 64 5 18 86 4 5 16 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT D 65 D 65 5 26 86 4 7 20 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT T 66 T 66 7 26 86 5 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 67 S 67 9 26 86 5 7 14 29 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 68 K 68 9 26 86 5 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT T 69 T 69 9 26 86 5 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT L 70 L 70 9 26 86 5 12 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT E 71 E 71 9 26 86 5 12 20 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT L 72 L 72 9 26 86 5 12 22 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 73 K 73 9 26 86 3 5 14 22 29 37 44 53 68 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT A 74 A 74 9 26 86 3 5 14 17 28 32 40 46 61 75 79 83 85 86 86 86 86 86 86 86 LCS_GDT E 75 E 75 9 26 86 3 5 14 17 24 32 36 46 62 75 79 83 85 86 86 86 86 86 86 86 LCS_GDT G 76 G 76 5 26 86 4 5 8 15 21 32 35 43 53 61 71 81 85 86 86 86 86 86 86 86 LCS_GDT V 77 V 77 5 26 86 4 5 13 20 29 35 40 46 57 72 79 83 85 86 86 86 86 86 86 86 LCS_GDT T 78 T 78 6 26 86 4 7 19 29 36 40 50 60 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 79 V 79 13 26 86 4 10 23 30 36 40 50 60 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT Q 80 Q 80 13 26 86 5 13 23 30 36 40 50 61 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT P 81 P 81 13 26 86 3 13 23 30 36 40 50 60 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT S 82 S 82 13 26 86 3 13 23 30 36 40 50 62 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT T 83 T 83 13 26 86 3 13 23 30 36 40 50 61 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 84 V 84 13 26 86 3 7 20 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 85 K 85 13 26 86 3 12 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 86 V 86 13 26 86 3 12 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT N 87 N 87 13 26 86 3 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT L 88 L 88 13 26 86 3 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 89 K 89 13 26 86 5 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT V 90 V 90 13 26 86 5 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT T 91 T 91 13 26 86 3 6 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT Q 92 Q 92 9 17 86 3 6 17 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_GDT K 93 K 93 4 17 86 3 4 11 18 27 38 50 63 72 76 80 83 85 86 86 86 86 86 86 86 LCS_AVERAGE LCS_A: 45.73 ( 11.56 25.62 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 13 23 30 36 40 50 63 72 76 80 83 85 86 86 86 86 86 86 86 GDT PERCENT_AT 8.14 15.12 26.74 34.88 41.86 46.51 58.14 73.26 83.72 88.37 93.02 96.51 98.84 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.20 0.68 1.02 1.26 1.51 1.86 2.49 3.12 3.28 3.39 3.53 3.65 3.74 3.79 3.79 3.79 3.79 3.79 3.79 3.79 GDT RMS_ALL_AT 5.97 4.69 4.63 4.56 4.52 4.37 4.03 3.83 3.80 3.80 3.81 3.80 3.80 3.79 3.79 3.79 3.79 3.79 3.79 3.79 # Checking swapping # possible swapping detected: Y 31 Y 31 # possible swapping detected: E 45 E 45 # possible swapping detected: D 65 D 65 # possible swapping detected: E 71 E 71 # possible swapping detected: E 75 E 75 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 8 L 8 6.338 0 0.655 0.599 7.585 19.405 14.762 LGA S 9 S 9 2.730 0 0.502 0.467 3.785 50.238 60.714 LGA K 10 K 10 2.837 0 0.227 1.040 6.256 55.357 40.370 LGA S 11 S 11 2.729 0 0.087 0.122 3.656 53.690 52.460 LGA V 12 V 12 2.068 0 0.031 0.945 3.660 66.786 65.170 LGA P 13 P 13 2.422 0 0.073 0.394 3.291 64.762 59.456 LGA V 14 V 14 2.214 0 0.064 1.134 3.517 59.167 58.571 LGA K 15 K 15 3.012 0 0.226 0.616 4.803 55.357 46.720 LGA L 16 L 16 3.028 0 0.067 0.939 5.645 46.786 43.155 LGA E 17 E 17 3.187 0 0.096 0.933 3.591 53.571 52.487 LGA L 18 L 18 3.570 0 0.105 0.198 5.418 50.119 40.833 LGA T 19 T 19 1.883 0 0.691 0.659 2.888 66.905 69.456 LGA G 20 G 20 2.171 0 0.089 0.089 4.919 51.071 51.071 LGA D 21 D 21 5.591 0 0.459 0.796 9.180 33.214 18.571 LGA K 22 K 22 3.006 0 0.590 1.292 5.913 48.810 40.847 LGA A 23 A 23 1.762 0 0.179 0.202 2.309 70.833 69.619 LGA S 24 S 24 3.006 0 0.615 0.551 3.400 55.476 53.651 LGA N 25 N 25 5.511 0 0.092 1.029 8.007 25.119 19.167 LGA V 26 V 26 4.692 0 0.299 1.069 6.765 37.500 30.136 LGA S 27 S 27 5.923 0 0.624 0.951 8.936 20.595 15.397 LGA S 28 S 28 4.706 0 0.306 0.372 5.052 30.119 30.556 LGA I 29 I 29 4.333 0 0.094 0.522 5.703 35.714 33.155 LGA S 30 S 30 4.429 0 0.291 0.721 5.595 35.714 32.619 LGA Y 31 Y 31 3.530 0 0.106 1.276 9.602 41.786 26.667 LGA S 32 S 32 4.037 0 0.326 0.748 6.231 40.238 35.873 LGA F 33 F 33 2.727 0 0.206 0.983 8.517 55.357 35.974 LGA D 34 D 34 2.675 0 0.623 0.509 4.827 48.929 55.000 LGA R 35 R 35 4.343 0 0.481 0.957 9.319 31.310 25.152 LGA G 36 G 36 4.806 0 0.536 0.536 6.190 27.976 27.976 LGA H 37 H 37 4.443 0 0.628 1.156 11.701 42.143 19.238 LGA V 38 V 38 1.792 0 0.408 0.376 4.083 70.833 65.442 LGA T 39 T 39 2.209 0 0.192 1.016 4.554 62.857 60.204 LGA I 40 I 40 2.854 0 0.063 1.130 4.154 59.048 54.702 LGA V 41 V 41 3.541 0 0.053 0.070 3.832 45.000 44.286 LGA G 42 G 42 3.339 0 0.042 0.042 3.433 53.571 53.571 LGA S 43 S 43 2.207 0 0.055 0.661 3.569 62.857 59.921 LGA Q 44 Q 44 2.089 0 0.065 0.915 6.135 66.786 50.529 LGA E 45 E 45 2.210 0 0.051 0.856 3.756 64.762 59.048 LGA A 46 A 46 2.219 0 0.063 0.076 2.408 64.762 64.762 LGA M 47 M 47 1.892 0 0.049 0.704 4.005 72.857 65.357 LGA D 48 D 48 2.308 0 0.107 0.125 2.642 62.976 64.881 LGA K 49 K 49 3.330 0 0.114 0.539 3.695 48.333 49.312 LGA I 50 I 50 3.282 0 0.015 0.711 4.457 48.333 47.560 LGA D 51 D 51 4.250 0 0.142 0.192 4.537 37.262 37.202 LGA S 52 S 52 3.881 0 0.117 0.680 4.144 48.452 45.714 LGA I 53 I 53 3.751 0 0.042 0.077 4.627 41.786 39.524 LGA T 54 T 54 3.826 0 0.114 0.970 6.817 43.333 39.320 LGA V 55 V 55 4.189 0 0.085 0.974 7.039 35.714 32.517 LGA P 56 P 56 4.252 0 0.059 0.422 5.112 37.262 35.646 LGA V 57 V 57 4.659 0 0.052 1.229 6.664 32.857 27.619 LGA D 58 D 58 5.291 0 0.072 0.944 5.958 25.000 33.988 LGA I 59 I 59 5.768 0 0.539 1.248 10.074 22.619 18.155 LGA S 60 S 60 7.024 0 0.062 0.080 9.303 16.548 12.460 LGA Q 61 Q 61 3.428 0 0.506 0.925 4.676 40.476 55.873 LGA V 62 V 62 2.803 0 0.604 1.300 5.549 44.762 54.626 LGA T 63 T 63 3.681 0 0.389 1.078 5.910 48.690 38.367 LGA E 64 E 64 2.211 0 0.258 0.711 3.856 70.952 60.159 LGA D 65 D 65 2.019 0 0.118 0.702 3.146 66.786 62.976 LGA T 66 T 66 2.053 0 0.136 1.101 4.406 73.095 64.490 LGA S 67 S 67 3.640 0 0.193 0.592 4.072 48.333 47.937 LGA K 68 K 68 3.457 0 0.122 1.362 5.855 48.333 50.423 LGA T 69 T 69 3.417 0 0.133 1.071 4.553 50.000 48.503 LGA L 70 L 70 3.608 0 0.118 1.165 5.188 43.333 41.250 LGA E 71 E 71 3.454 0 0.050 0.717 4.014 50.000 47.090 LGA L 72 L 72 3.274 0 0.340 0.395 3.451 51.786 53.571 LGA K 73 K 73 4.990 0 0.228 0.923 9.847 29.048 17.566 LGA A 74 A 74 5.831 0 0.200 0.290 6.188 21.548 21.524 LGA E 75 E 75 5.917 0 0.587 0.708 8.585 21.429 16.296 LGA G 76 G 76 6.933 0 0.592 0.592 7.493 12.500 12.500 LGA V 77 V 77 5.892 0 0.091 1.076 7.981 23.810 20.272 LGA T 78 T 78 4.500 0 0.063 0.162 5.022 34.405 36.463 LGA V 79 V 79 4.649 0 0.027 0.080 5.404 34.286 31.565 LGA Q 80 Q 80 4.266 0 0.479 1.229 9.422 31.786 20.053 LGA P 81 P 81 4.662 0 0.624 0.604 5.606 30.357 34.218 LGA S 82 S 82 3.975 0 0.123 0.202 4.089 40.238 42.381 LGA T 83 T 83 4.014 0 0.102 1.096 7.149 40.238 34.218 LGA V 84 V 84 3.389 0 0.037 1.198 6.380 50.000 47.619 LGA K 85 K 85 3.336 0 0.254 0.326 4.105 46.786 48.571 LGA V 86 V 86 3.068 0 0.122 0.155 3.100 51.786 54.082 LGA N 87 N 87 3.149 0 0.205 1.037 6.822 48.333 38.036 LGA L 88 L 88 2.904 0 0.249 1.464 6.032 51.905 41.786 LGA K 89 K 89 2.795 0 0.126 0.834 3.834 57.143 56.508 LGA V 90 V 90 2.700 0 0.118 0.148 3.675 55.357 52.109 LGA T 91 T 91 2.620 0 0.152 0.195 3.454 55.476 57.347 LGA Q 92 Q 92 3.653 0 0.194 1.322 7.465 53.810 38.254 LGA K 93 K 93 3.297 0 0.643 0.985 9.579 37.143 24.497 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 86 344 344 100.00 644 644 100.00 86 SUMMARY(RMSD_GDC): 3.795 3.828 4.394 46.067 42.531 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 86 86 4.0 63 3.12 55.814 52.040 1.956 LGA_LOCAL RMSD: 3.121 Number of atoms: 63 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.825 Number of assigned atoms: 86 Std_ASGN_ATOMS RMSD: 3.795 Standard rmsd on all 86 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.084962 * X + 0.521489 * Y + -0.849018 * Z + 37.064766 Y_new = 0.786720 * X + -0.558004 * Y + -0.264013 * Z + -4.713957 Z_new = -0.611435 * X + -0.645508 * Y + -0.457675 * Z + -0.297845 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.463218 0.657872 -2.187547 [DEG: 83.8362 37.6933 -125.3372 ] ZXZ: -1.269313 2.046175 -2.383296 [DEG: -72.7263 117.2372 -136.5528 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0572TS113_1-D1 REMARK 2: T0572-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0572TS113_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 86 86 4.0 63 3.12 52.040 3.79 REMARK ---------------------------------------------------------- MOLECULE T0572TS113_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0572 REMARK MODEL 1 REFINED REMARK PARENT N/A ATOM 60 N LEU 8 19.002 3.259 0.532 1.00 0.00 N ATOM 61 CA LEU 8 17.558 3.181 0.283 1.00 0.00 C ATOM 62 C LEU 8 16.663 3.120 1.585 1.00 0.00 C ATOM 63 O LEU 8 15.470 2.795 1.415 1.00 0.00 O ATOM 64 CB LEU 8 17.043 2.094 -0.673 1.00 0.00 C ATOM 65 CG LEU 8 17.062 2.428 -2.151 1.00 0.00 C ATOM 66 CD1 LEU 8 18.298 3.226 -2.550 1.00 0.00 C ATOM 67 CD2 LEU 8 16.957 1.158 -2.985 1.00 0.00 C ATOM 68 N SER 9 17.144 3.533 2.792 1.00 0.00 N ATOM 69 CA SER 9 16.252 3.554 3.934 1.00 0.00 C ATOM 70 C SER 9 15.514 4.952 3.931 1.00 0.00 C ATOM 71 O SER 9 15.335 5.560 4.997 1.00 0.00 O ATOM 72 CB SER 9 17.058 3.254 5.177 1.00 0.00 C ATOM 73 OG SER 9 18.046 4.090 5.648 1.00 0.00 O ATOM 74 N LYS 10 14.651 5.045 2.946 1.00 0.00 N ATOM 75 CA LYS 10 13.860 6.165 2.626 1.00 0.00 C ATOM 76 C LYS 10 12.441 5.656 2.623 1.00 0.00 C ATOM 77 O LYS 10 12.066 4.906 1.707 1.00 0.00 O ATOM 78 CB LYS 10 14.322 6.795 1.293 1.00 0.00 C ATOM 79 CG LYS 10 13.793 8.213 1.127 1.00 0.00 C ATOM 80 CD LYS 10 14.155 8.755 -0.250 1.00 0.00 C ATOM 81 CE LYS 10 14.272 10.274 -0.243 1.00 0.00 C ATOM 82 NZ LYS 10 14.167 10.841 -1.618 1.00 0.00 N ATOM 83 N SER 11 11.634 6.271 3.492 1.00 0.00 N ATOM 84 CA SER 11 10.293 5.756 3.602 1.00 0.00 C ATOM 85 C SER 11 9.527 5.842 2.247 1.00 0.00 C ATOM 86 O SER 11 9.349 6.924 1.692 1.00 0.00 O ATOM 87 CB SER 11 9.564 6.624 4.606 1.00 0.00 C ATOM 88 OG SER 11 8.169 6.400 4.853 1.00 0.00 O ATOM 89 N VAL 12 9.098 4.687 1.686 1.00 0.00 N ATOM 90 CA VAL 12 8.408 4.502 0.347 1.00 0.00 C ATOM 91 C VAL 12 6.871 4.244 0.668 1.00 0.00 C ATOM 92 O VAL 12 6.565 3.085 0.997 1.00 0.00 O ATOM 93 CB VAL 12 9.007 3.259 -0.263 1.00 0.00 C ATOM 94 CG1 VAL 12 8.274 2.993 -1.641 1.00 0.00 C ATOM 95 CG2 VAL 12 10.486 3.451 -0.567 1.00 0.00 C ATOM 96 N PRO 13 5.832 5.147 0.438 1.00 0.00 N ATOM 97 CA PRO 13 4.548 4.794 0.882 1.00 0.00 C ATOM 98 C PRO 13 3.911 3.596 0.122 1.00 0.00 C ATOM 99 O PRO 13 4.379 3.271 -0.975 1.00 0.00 O ATOM 100 CB PRO 13 3.597 6.020 0.724 1.00 0.00 C ATOM 101 CG PRO 13 4.256 6.552 -0.581 1.00 0.00 C ATOM 102 CD PRO 13 5.728 6.329 -0.469 1.00 0.00 C ATOM 103 N VAL 14 2.727 3.120 0.583 1.00 0.00 N ATOM 104 CA VAL 14 1.997 1.967 0.030 1.00 0.00 C ATOM 105 C VAL 14 0.528 2.343 -0.410 1.00 0.00 C ATOM 106 O VAL 14 -0.208 3.055 0.290 1.00 0.00 O ATOM 107 CB VAL 14 1.960 0.842 1.086 1.00 0.00 C ATOM 108 CG1 VAL 14 1.227 -0.406 0.495 1.00 0.00 C ATOM 109 CG2 VAL 14 3.340 0.455 1.570 1.00 0.00 C ATOM 110 N LYS 15 0.293 2.114 -1.702 1.00 0.00 N ATOM 111 CA LYS 15 -1.001 2.332 -2.316 1.00 0.00 C ATOM 112 C LYS 15 -1.674 1.020 -2.604 1.00 0.00 C ATOM 113 O LYS 15 -1.802 0.602 -3.770 1.00 0.00 O ATOM 114 CB LYS 15 -0.803 3.098 -3.617 1.00 0.00 C ATOM 115 CG LYS 15 -0.238 4.507 -3.435 1.00 0.00 C ATOM 116 CD LYS 15 -0.209 5.282 -4.746 1.00 0.00 C ATOM 117 CE LYS 15 0.406 6.666 -4.568 1.00 0.00 C ATOM 118 NZ LYS 15 0.373 7.452 -5.834 1.00 0.00 N ATOM 119 N LEU 16 -2.555 0.705 -1.697 1.00 0.00 N ATOM 120 CA LEU 16 -3.442 -0.436 -1.763 1.00 0.00 C ATOM 121 C LEU 16 -4.524 -0.224 -2.814 1.00 0.00 C ATOM 122 O LEU 16 -5.302 0.757 -2.737 1.00 0.00 O ATOM 123 CB LEU 16 -4.175 -0.519 -0.381 1.00 0.00 C ATOM 124 CG LEU 16 -5.126 -1.724 -0.181 1.00 0.00 C ATOM 125 CD1 LEU 16 -4.405 -3.041 -0.357 1.00 0.00 C ATOM 126 CD2 LEU 16 -5.708 -1.655 1.187 1.00 0.00 C ATOM 127 N GLU 17 -4.499 -1.061 -3.831 1.00 0.00 N ATOM 128 CA GLU 17 -5.545 -1.011 -4.817 1.00 0.00 C ATOM 129 C GLU 17 -6.396 -2.299 -4.693 1.00 0.00 C ATOM 130 O GLU 17 -5.849 -3.418 -4.502 1.00 0.00 O ATOM 131 CB GLU 17 -4.910 -0.872 -6.221 1.00 0.00 C ATOM 132 CG GLU 17 -5.985 -0.863 -7.327 1.00 0.00 C ATOM 133 CD GLU 17 -5.395 -0.600 -8.700 1.00 0.00 C ATOM 134 OE1 GLU 17 -4.297 -1.117 -9.002 1.00 0.00 O ATOM 135 OE2 GLU 17 -6.035 0.141 -9.483 1.00 0.00 O ATOM 136 N LEU 18 -7.703 -2.148 -4.978 1.00 0.00 N ATOM 137 CA LEU 18 -8.520 -3.310 -4.981 1.00 0.00 C ATOM 138 C LEU 18 -8.392 -3.860 -6.379 1.00 0.00 C ATOM 139 O LEU 18 -9.018 -3.348 -7.357 1.00 0.00 O ATOM 140 CB LEU 18 -9.935 -2.661 -4.900 1.00 0.00 C ATOM 141 CG LEU 18 -10.272 -1.961 -3.564 1.00 0.00 C ATOM 142 CD1 LEU 18 -11.699 -1.432 -3.573 1.00 0.00 C ATOM 143 CD2 LEU 18 -10.044 -2.862 -2.357 1.00 0.00 C ATOM 144 N THR 19 -7.516 -4.818 -6.490 1.00 0.00 N ATOM 145 CA THR 19 -7.262 -5.468 -7.761 1.00 0.00 C ATOM 146 C THR 19 -8.489 -6.293 -8.330 1.00 0.00 C ATOM 147 O THR 19 -8.499 -6.457 -9.558 1.00 0.00 O ATOM 148 CB THR 19 -5.981 -6.345 -7.628 1.00 0.00 C ATOM 149 OG1 THR 19 -4.778 -5.519 -7.291 1.00 0.00 O ATOM 150 CG2 THR 19 -5.633 -7.059 -9.008 1.00 0.00 C ATOM 151 N GLY 20 -9.635 -6.376 -7.666 1.00 0.00 N ATOM 152 CA GLY 20 -10.776 -7.128 -8.061 1.00 0.00 C ATOM 153 C GLY 20 -11.907 -7.052 -6.984 1.00 0.00 C ATOM 154 O GLY 20 -11.812 -6.294 -6.002 1.00 0.00 O ATOM 155 N ASP 21 -12.974 -7.861 -7.196 1.00 0.00 N ATOM 156 CA ASP 21 -14.097 -7.844 -6.285 1.00 0.00 C ATOM 157 C ASP 21 -14.612 -6.396 -5.896 1.00 0.00 C ATOM 158 O ASP 21 -14.860 -6.105 -4.733 1.00 0.00 O ATOM 159 CB ASP 21 -13.877 -8.661 -4.999 1.00 0.00 C ATOM 160 CG ASP 21 -13.299 -10.035 -5.302 1.00 0.00 C ATOM 161 OD1 ASP 21 -12.184 -10.152 -5.852 1.00 0.00 O ATOM 162 OD2 ASP 21 -13.999 -11.021 -4.976 1.00 0.00 O ATOM 163 N LYS 22 -14.849 -5.492 -6.862 1.00 0.00 N ATOM 164 CA LYS 22 -15.410 -4.147 -6.688 1.00 0.00 C ATOM 165 C LYS 22 -16.979 -4.131 -6.580 1.00 0.00 C ATOM 166 O LYS 22 -17.440 -3.587 -5.561 1.00 0.00 O ATOM 167 CB LYS 22 -14.896 -3.304 -7.841 1.00 0.00 C ATOM 168 CG LYS 22 -13.427 -3.078 -7.903 1.00 0.00 C ATOM 169 CD LYS 22 -13.021 -2.191 -9.073 1.00 0.00 C ATOM 170 CE LYS 22 -13.261 -2.880 -10.412 1.00 0.00 C ATOM 171 NZ LYS 22 -14.682 -2.765 -10.846 1.00 0.00 N ATOM 172 N ALA 23 -17.762 -4.821 -7.469 1.00 0.00 N ATOM 173 CA ALA 23 -19.210 -4.710 -7.350 1.00 0.00 C ATOM 174 C ALA 23 -19.653 -3.258 -7.661 1.00 0.00 C ATOM 175 O ALA 23 -19.463 -2.406 -6.768 1.00 0.00 O ATOM 176 CB ALA 23 -19.733 -5.244 -6.004 1.00 0.00 C ATOM 177 N SER 24 -20.025 -2.977 -8.940 1.00 0.00 N ATOM 178 CA SER 24 -20.374 -1.637 -9.444 1.00 0.00 C ATOM 179 C SER 24 -20.791 -0.738 -8.264 1.00 0.00 C ATOM 180 O SER 24 -21.865 -0.984 -7.682 1.00 0.00 O ATOM 181 CB SER 24 -21.465 -1.818 -10.511 1.00 0.00 C ATOM 182 OG SER 24 -22.729 -2.318 -10.044 1.00 0.00 O ATOM 183 N ASN 25 -20.279 0.482 -8.359 1.00 0.00 N ATOM 184 CA ASN 25 -20.328 1.558 -7.323 1.00 0.00 C ATOM 185 C ASN 25 -19.023 1.618 -6.436 1.00 0.00 C ATOM 186 O ASN 25 -18.845 2.625 -5.730 1.00 0.00 O ATOM 187 CB ASN 25 -21.573 1.505 -6.419 1.00 0.00 C ATOM 188 CG ASN 25 -22.834 1.830 -7.182 1.00 0.00 C ATOM 189 OD1 ASN 25 -22.796 2.518 -8.206 1.00 0.00 O ATOM 190 ND2 ASN 25 -23.970 1.369 -6.675 1.00 0.00 N ATOM 191 N VAL 26 -18.056 0.703 -6.613 1.00 0.00 N ATOM 192 CA VAL 26 -16.747 0.635 -5.959 1.00 0.00 C ATOM 193 C VAL 26 -16.817 1.048 -4.429 1.00 0.00 C ATOM 194 O VAL 26 -17.858 0.824 -3.777 1.00 0.00 O ATOM 195 CB VAL 26 -15.683 1.509 -6.717 1.00 0.00 C ATOM 196 CG1 VAL 26 -15.513 1.031 -8.121 1.00 0.00 C ATOM 197 CG2 VAL 26 -16.135 2.969 -6.669 1.00 0.00 C ATOM 198 N SER 27 -15.862 1.881 -3.963 1.00 0.00 N ATOM 199 CA SER 27 -15.787 2.399 -2.618 1.00 0.00 C ATOM 200 C SER 27 -14.630 3.405 -2.517 1.00 0.00 C ATOM 201 O SER 27 -13.542 3.151 -3.131 1.00 0.00 O ATOM 202 CB SER 27 -15.692 1.262 -1.570 1.00 0.00 C ATOM 203 OG SER 27 -16.634 0.209 -1.579 1.00 0.00 O ATOM 204 N SER 28 -14.693 4.269 -1.499 1.00 0.00 N ATOM 205 CA SER 28 -13.576 5.089 -1.260 1.00 0.00 C ATOM 206 C SER 28 -12.853 4.444 -0.092 1.00 0.00 C ATOM 207 O SER 28 -13.150 4.866 1.041 1.00 0.00 O ATOM 208 CB SER 28 -14.013 6.553 -0.985 1.00 0.00 C ATOM 209 OG SER 28 -12.887 7.463 -0.791 1.00 0.00 O ATOM 210 N ILE 29 -11.788 3.612 -0.290 1.00 0.00 N ATOM 211 CA ILE 29 -11.168 3.071 0.858 1.00 0.00 C ATOM 212 C ILE 29 -10.320 4.267 1.395 1.00 0.00 C ATOM 213 O ILE 29 -9.476 4.866 0.679 1.00 0.00 O ATOM 214 CB ILE 29 -10.035 2.033 0.499 1.00 0.00 C ATOM 215 CG1 ILE 29 -10.101 1.571 -0.973 1.00 0.00 C ATOM 216 CG2 ILE 29 -10.107 0.730 1.373 1.00 0.00 C ATOM 217 CD1 ILE 29 -9.281 0.229 -1.102 1.00 0.00 C ATOM 218 N SER 30 -10.249 4.343 2.756 1.00 0.00 N ATOM 219 CA SER 30 -9.456 5.254 3.520 1.00 0.00 C ATOM 220 C SER 30 -8.254 4.441 4.126 1.00 0.00 C ATOM 221 O SER 30 -8.397 3.839 5.198 1.00 0.00 O ATOM 222 CB SER 30 -10.306 6.005 4.544 1.00 0.00 C ATOM 223 OG SER 30 -10.934 5.233 5.593 1.00 0.00 O ATOM 224 N TYR 31 -7.076 4.901 3.725 1.00 0.00 N ATOM 225 CA TYR 31 -5.803 4.315 4.049 1.00 0.00 C ATOM 226 C TYR 31 -5.132 5.034 5.243 1.00 0.00 C ATOM 227 O TYR 31 -5.044 6.281 5.255 1.00 0.00 O ATOM 228 CB TYR 31 -4.896 4.486 2.793 1.00 0.00 C ATOM 229 CG TYR 31 -3.487 3.904 3.021 1.00 0.00 C ATOM 230 CD1 TYR 31 -3.261 2.530 3.009 1.00 0.00 C ATOM 231 CD2 TYR 31 -2.404 4.752 3.239 1.00 0.00 C ATOM 232 CE1 TYR 31 -1.985 2.010 3.209 1.00 0.00 C ATOM 233 CE2 TYR 31 -1.125 4.244 3.440 1.00 0.00 C ATOM 234 CZ TYR 31 -0.925 2.873 3.423 1.00 0.00 C ATOM 235 OH TYR 31 0.341 2.369 3.621 1.00 0.00 H ATOM 236 N SER 32 -4.828 4.253 6.280 1.00 0.00 N ATOM 237 CA SER 32 -4.109 4.825 7.432 1.00 0.00 C ATOM 238 C SER 32 -2.768 4.072 7.606 1.00 0.00 C ATOM 239 O SER 32 -2.700 3.030 8.274 1.00 0.00 O ATOM 240 CB SER 32 -4.976 4.907 8.682 1.00 0.00 C ATOM 241 OG SER 32 -5.774 3.762 8.999 1.00 0.00 O ATOM 242 N PHE 33 -1.707 4.782 7.157 1.00 0.00 N ATOM 243 CA PHE 33 -0.327 4.236 7.295 1.00 0.00 C ATOM 244 C PHE 33 0.430 5.219 8.235 1.00 0.00 C ATOM 245 O PHE 33 0.896 6.290 7.831 1.00 0.00 O ATOM 246 CB PHE 33 0.365 4.061 5.962 1.00 0.00 C ATOM 247 CG PHE 33 1.717 3.423 6.081 1.00 0.00 C ATOM 248 CD1 PHE 33 2.135 2.855 7.279 1.00 0.00 C ATOM 249 CD2 PHE 33 2.568 3.377 4.983 1.00 0.00 C ATOM 250 CE1 PHE 33 3.385 2.251 7.382 1.00 0.00 C ATOM 251 CE2 PHE 33 3.820 2.774 5.076 1.00 0.00 C ATOM 252 CZ PHE 33 4.228 2.211 6.278 1.00 0.00 C ATOM 253 N ASP 34 0.600 4.725 9.462 1.00 0.00 N ATOM 254 CA ASP 34 1.274 5.373 10.570 1.00 0.00 C ATOM 255 C ASP 34 2.693 4.764 10.732 1.00 0.00 C ATOM 256 O ASP 34 2.845 3.551 11.014 1.00 0.00 O ATOM 257 CB ASP 34 0.462 5.202 11.832 1.00 0.00 C ATOM 258 CG ASP 34 -0.859 5.937 11.806 1.00 0.00 C ATOM 259 OD1 ASP 34 -0.878 7.142 11.481 1.00 0.00 O ATOM 260 OD2 ASP 34 -1.895 5.301 12.104 1.00 0.00 O ATOM 261 N ARG 35 3.625 5.696 10.899 1.00 0.00 N ATOM 262 CA ARG 35 5.082 5.449 11.010 1.00 0.00 C ATOM 263 C ARG 35 5.589 4.585 9.813 1.00 0.00 C ATOM 264 O ARG 35 6.317 3.593 10.081 1.00 0.00 O ATOM 265 CB ARG 35 5.365 4.757 12.348 1.00 0.00 C ATOM 266 CG ARG 35 5.024 5.586 13.556 1.00 0.00 C ATOM 267 CD ARG 35 5.383 4.866 14.849 1.00 0.00 C ATOM 268 NE ARG 35 5.003 5.646 16.024 1.00 0.00 N ATOM 269 CZ ARG 35 5.132 5.238 17.285 1.00 0.00 C ATOM 270 NH1 ARG 35 5.809 4.131 17.578 1.00 0.00 H ATOM 271 NH2 ARG 35 4.567 5.941 18.264 1.00 0.00 H ATOM 272 N GLY 36 5.255 4.869 8.564 1.00 0.00 N ATOM 273 CA GLY 36 5.866 4.114 7.521 1.00 0.00 C ATOM 274 C GLY 36 7.376 4.342 7.371 1.00 0.00 C ATOM 275 O GLY 36 7.866 5.495 7.441 1.00 0.00 O ATOM 276 N HIS 37 8.052 3.208 7.295 1.00 0.00 N ATOM 277 CA HIS 37 9.475 3.198 7.086 1.00 0.00 C ATOM 278 C HIS 37 9.864 2.761 5.665 1.00 0.00 C ATOM 279 O HIS 37 10.749 3.411 5.135 1.00 0.00 O ATOM 280 CB HIS 37 10.083 2.269 8.134 1.00 0.00 C ATOM 281 CG HIS 37 9.830 2.650 9.541 1.00 0.00 C ATOM 282 ND1 HIS 37 10.508 3.659 10.189 1.00 0.00 N ATOM 283 CD2 HIS 37 8.924 2.160 10.427 1.00 0.00 C ATOM 284 CE1 HIS 37 10.032 3.773 11.419 1.00 0.00 C ATOM 285 NE2 HIS 37 9.071 2.878 11.588 1.00 0.00 N ATOM 286 N VAL 38 9.484 1.514 5.265 1.00 0.00 N ATOM 287 CA VAL 38 9.697 1.014 3.962 1.00 0.00 C ATOM 288 C VAL 38 11.098 1.258 3.306 1.00 0.00 C ATOM 289 O VAL 38 11.289 2.082 2.448 1.00 0.00 O ATOM 290 CB VAL 38 8.386 1.201 3.200 1.00 0.00 C ATOM 291 CG1 VAL 38 7.935 2.705 3.231 1.00 0.00 C ATOM 292 CG2 VAL 38 8.134 0.706 1.817 1.00 0.00 C ATOM 293 N THR 39 12.063 0.787 4.050 1.00 0.00 N ATOM 294 CA THR 39 13.512 0.730 3.754 1.00 0.00 C ATOM 295 C THR 39 13.816 -0.447 2.818 1.00 0.00 C ATOM 296 O THR 39 13.983 -1.615 3.223 1.00 0.00 O ATOM 297 CB THR 39 14.331 0.495 5.073 1.00 0.00 C ATOM 298 OG1 THR 39 14.148 -0.793 5.721 1.00 0.00 O ATOM 299 CG2 THR 39 14.317 1.766 5.946 1.00 0.00 C ATOM 300 N ILE 40 14.058 -0.041 1.573 1.00 0.00 N ATOM 301 CA ILE 40 14.407 -0.879 0.444 1.00 0.00 C ATOM 302 C ILE 40 15.941 -1.143 0.499 1.00 0.00 C ATOM 303 O ILE 40 16.744 -0.238 0.760 1.00 0.00 O ATOM 304 CB ILE 40 14.057 -0.043 -0.804 1.00 0.00 C ATOM 305 CG1 ILE 40 12.561 0.153 -0.940 1.00 0.00 C ATOM 306 CG2 ILE 40 14.572 -0.854 -2.075 1.00 0.00 C ATOM 307 CD1 ILE 40 12.152 1.098 -2.060 1.00 0.00 C ATOM 308 N VAL 41 16.371 -2.361 0.142 1.00 0.00 N ATOM 309 CA VAL 41 17.806 -2.699 0.213 1.00 0.00 C ATOM 310 C VAL 41 18.275 -3.668 -0.902 1.00 0.00 C ATOM 311 O VAL 41 17.594 -4.605 -1.303 1.00 0.00 O ATOM 312 CB VAL 41 18.069 -3.361 1.587 1.00 0.00 C ATOM 313 CG1 VAL 41 19.601 -3.496 1.816 1.00 0.00 C ATOM 314 CG2 VAL 41 17.470 -2.552 2.721 1.00 0.00 C ATOM 315 N GLY 42 19.486 -3.368 -1.347 1.00 0.00 N ATOM 316 CA GLY 42 20.266 -4.120 -2.310 1.00 0.00 C ATOM 317 C GLY 42 21.613 -3.378 -2.531 1.00 0.00 C ATOM 318 O GLY 42 21.994 -2.423 -1.804 1.00 0.00 O ATOM 319 N SER 43 22.442 -3.943 -3.410 1.00 0.00 N ATOM 320 CA SER 43 23.719 -3.323 -3.774 1.00 0.00 C ATOM 321 C SER 43 23.404 -1.885 -4.362 1.00 0.00 C ATOM 322 O SER 43 22.263 -1.549 -4.726 1.00 0.00 O ATOM 323 CB SER 43 24.466 -4.212 -4.772 1.00 0.00 C ATOM 324 OG SER 43 23.932 -4.294 -6.090 1.00 0.00 O ATOM 325 N GLN 44 24.300 -0.928 -4.133 1.00 0.00 N ATOM 326 CA GLN 44 24.156 0.443 -4.687 1.00 0.00 C ATOM 327 C GLN 44 23.618 0.385 -6.177 1.00 0.00 C ATOM 328 O GLN 44 22.729 1.175 -6.478 1.00 0.00 O ATOM 329 CB GLN 44 25.513 1.187 -4.598 1.00 0.00 C ATOM 330 CG GLN 44 25.414 2.608 -5.153 1.00 0.00 C ATOM 331 CD GLN 44 26.749 3.327 -5.085 1.00 0.00 C ATOM 332 OE1 GLN 44 27.770 2.736 -4.718 1.00 0.00 O ATOM 333 NE2 GLN 44 26.755 4.610 -5.432 1.00 0.00 N ATOM 334 N GLU 45 24.155 -0.478 -7.082 1.00 0.00 N ATOM 335 CA GLU 45 23.677 -0.674 -8.465 1.00 0.00 C ATOM 336 C GLU 45 22.145 -1.090 -8.540 1.00 0.00 C ATOM 337 O GLU 45 21.485 -0.572 -9.433 1.00 0.00 O ATOM 338 CB GLU 45 24.578 -1.762 -9.123 1.00 0.00 C ATOM 339 CG GLU 45 24.183 -2.007 -10.594 1.00 0.00 C ATOM 340 CD GLU 45 25.047 -3.068 -11.253 1.00 0.00 C ATOM 341 OE1 GLU 45 25.952 -3.617 -10.588 1.00 0.00 O ATOM 342 OE2 GLU 45 24.821 -3.347 -12.454 1.00 0.00 O ATOM 343 N ALA 46 21.621 -2.026 -7.699 1.00 0.00 N ATOM 344 CA ALA 46 20.199 -2.406 -7.627 1.00 0.00 C ATOM 345 C ALA 46 19.283 -1.197 -7.174 1.00 0.00 C ATOM 346 O ALA 46 18.320 -0.922 -7.851 1.00 0.00 O ATOM 347 CB ALA 46 20.064 -3.648 -6.727 1.00 0.00 C ATOM 348 N MET 47 19.635 -0.495 -6.135 1.00 0.00 N ATOM 349 CA MET 47 18.893 0.634 -5.539 1.00 0.00 C ATOM 350 C MET 47 18.753 1.814 -6.626 1.00 0.00 C ATOM 351 O MET 47 17.677 2.375 -6.825 1.00 0.00 O ATOM 352 CB MET 47 19.777 1.053 -4.412 1.00 0.00 C ATOM 353 CG MET 47 19.723 0.156 -3.184 1.00 0.00 C ATOM 354 SD MET 47 20.513 0.846 -1.711 1.00 0.00 S ATOM 355 CE MET 47 22.234 0.747 -2.180 1.00 0.00 C ATOM 356 N ASP 48 19.935 2.246 -7.162 1.00 0.00 N ATOM 357 CA ASP 48 20.175 3.258 -8.236 1.00 0.00 C ATOM 358 C ASP 48 19.378 2.855 -9.542 1.00 0.00 C ATOM 359 O ASP 48 18.777 3.758 -10.132 1.00 0.00 O ATOM 360 CB ASP 48 21.659 3.416 -8.535 1.00 0.00 C ATOM 361 CG ASP 48 22.404 4.131 -7.439 1.00 0.00 C ATOM 362 OD1 ASP 48 21.763 4.719 -6.541 1.00 0.00 O ATOM 363 OD2 ASP 48 23.656 4.114 -7.476 1.00 0.00 O ATOM 364 N LYS 49 19.384 1.581 -9.986 1.00 0.00 N ATOM 365 CA LYS 49 18.585 1.100 -11.133 1.00 0.00 C ATOM 366 C LYS 49 17.047 1.005 -10.800 1.00 0.00 C ATOM 367 O LYS 49 16.280 0.890 -11.773 1.00 0.00 O ATOM 368 CB LYS 49 19.109 -0.241 -11.627 1.00 0.00 C ATOM 369 CG LYS 49 18.618 -1.423 -10.787 1.00 0.00 C ATOM 370 CD LYS 49 18.945 -2.751 -11.457 1.00 0.00 C ATOM 371 CE LYS 49 18.391 -3.933 -10.670 1.00 0.00 C ATOM 372 NZ LYS 49 19.309 -5.107 -10.718 1.00 0.00 N ATOM 373 N ILE 50 16.593 1.164 -9.543 1.00 0.00 N ATOM 374 CA ILE 50 15.205 1.145 -9.185 1.00 0.00 C ATOM 375 C ILE 50 14.584 2.529 -9.445 1.00 0.00 C ATOM 376 O ILE 50 14.974 3.529 -8.813 1.00 0.00 O ATOM 377 CB ILE 50 14.924 0.619 -7.773 1.00 0.00 C ATOM 378 CG1 ILE 50 15.568 -0.728 -7.557 1.00 0.00 C ATOM 379 CG2 ILE 50 13.437 0.614 -7.473 1.00 0.00 C ATOM 380 CD1 ILE 50 15.065 -1.789 -8.525 1.00 0.00 C ATOM 381 N ASP 51 13.809 2.535 -10.517 1.00 0.00 N ATOM 382 CA ASP 51 13.100 3.743 -10.953 1.00 0.00 C ATOM 383 C ASP 51 12.100 4.137 -9.821 1.00 0.00 C ATOM 384 O ASP 51 12.130 5.312 -9.431 1.00 0.00 O ATOM 385 CB ASP 51 12.388 3.569 -12.299 1.00 0.00 C ATOM 386 CG ASP 51 13.347 3.534 -13.450 1.00 0.00 C ATOM 387 OD1 ASP 51 14.555 3.792 -13.262 1.00 0.00 O ATOM 388 OD2 ASP 51 12.882 3.257 -14.579 1.00 0.00 O ATOM 389 N SER 52 11.218 3.240 -9.316 1.00 0.00 N ATOM 390 CA SER 52 10.330 3.537 -8.226 1.00 0.00 C ATOM 391 C SER 52 9.798 2.272 -7.494 1.00 0.00 C ATOM 392 O SER 52 9.412 1.293 -8.159 1.00 0.00 O ATOM 393 CB SER 52 9.137 4.308 -8.808 1.00 0.00 C ATOM 394 OG SER 52 9.113 5.691 -8.794 1.00 0.00 O ATOM 395 N ILE 53 9.807 2.326 -6.145 1.00 0.00 N ATOM 396 CA ILE 53 9.224 1.226 -5.413 1.00 0.00 C ATOM 397 C ILE 53 7.830 1.690 -5.044 1.00 0.00 C ATOM 398 O ILE 53 7.646 2.586 -4.242 1.00 0.00 O ATOM 399 CB ILE 53 10.077 0.714 -4.275 1.00 0.00 C ATOM 400 CG1 ILE 53 11.483 0.443 -4.698 1.00 0.00 C ATOM 401 CG2 ILE 53 9.407 -0.494 -3.619 1.00 0.00 C ATOM 402 CD1 ILE 53 11.589 -0.684 -5.716 1.00 0.00 C ATOM 403 N THR 54 6.873 1.324 -5.902 1.00 0.00 N ATOM 404 CA THR 54 5.463 1.560 -5.763 1.00 0.00 C ATOM 405 C THR 54 4.857 0.252 -5.254 1.00 0.00 C ATOM 406 O THR 54 4.704 -0.718 -6.025 1.00 0.00 O ATOM 407 CB THR 54 4.977 2.149 -7.141 1.00 0.00 C ATOM 408 OG1 THR 54 5.219 1.356 -8.288 1.00 0.00 O ATOM 409 CG2 THR 54 5.651 3.572 -7.352 1.00 0.00 C ATOM 410 N VAL 55 4.623 0.227 -3.923 1.00 0.00 N ATOM 411 CA VAL 55 4.148 -1.002 -3.372 1.00 0.00 C ATOM 412 C VAL 55 2.652 -1.058 -3.136 1.00 0.00 C ATOM 413 O VAL 55 2.237 -0.389 -2.192 1.00 0.00 O ATOM 414 CB VAL 55 4.967 -1.351 -2.117 1.00 0.00 C ATOM 415 CG1 VAL 55 6.369 -1.768 -2.396 1.00 0.00 C ATOM 416 CG2 VAL 55 4.917 -0.163 -1.142 1.00 0.00 C ATOM 417 N PRO 56 1.744 -1.551 -4.089 1.00 0.00 N ATOM 418 CA PRO 56 0.414 -1.625 -3.634 1.00 0.00 C ATOM 419 C PRO 56 0.145 -2.857 -2.775 1.00 0.00 C ATOM 420 O PRO 56 0.888 -3.851 -2.803 1.00 0.00 O ATOM 421 CB PRO 56 -0.608 -1.705 -4.854 1.00 0.00 C ATOM 422 CG PRO 56 0.280 -0.977 -5.911 1.00 0.00 C ATOM 423 CD PRO 56 1.732 -1.386 -5.564 1.00 0.00 C ATOM 424 N VAL 57 -1.111 -2.852 -2.276 1.00 0.00 N ATOM 425 CA VAL 57 -1.740 -3.920 -1.482 1.00 0.00 C ATOM 426 C VAL 57 -2.990 -4.424 -2.192 1.00 0.00 C ATOM 427 O VAL 57 -3.684 -3.691 -2.931 1.00 0.00 O ATOM 428 CB VAL 57 -1.848 -3.668 0.089 1.00 0.00 C ATOM 429 CG1 VAL 57 -2.147 -5.042 0.732 1.00 0.00 C ATOM 430 CG2 VAL 57 -0.965 -2.915 0.840 1.00 0.00 C ATOM 431 N ASP 58 -2.994 -5.718 -2.369 1.00 0.00 N ATOM 432 CA ASP 58 -4.043 -6.415 -3.070 1.00 0.00 C ATOM 433 C ASP 58 -5.144 -6.635 -2.065 1.00 0.00 C ATOM 434 O ASP 58 -4.953 -7.464 -1.179 1.00 0.00 O ATOM 435 CB ASP 58 -3.505 -7.732 -3.659 1.00 0.00 C ATOM 436 CG ASP 58 -4.616 -8.516 -4.354 1.00 0.00 C ATOM 437 OD1 ASP 58 -5.235 -7.992 -5.304 1.00 0.00 O ATOM 438 OD2 ASP 58 -4.854 -9.676 -3.951 1.00 0.00 O ATOM 439 N ILE 59 -6.273 -5.938 -2.244 1.00 0.00 N ATOM 440 CA ILE 59 -7.390 -6.212 -1.346 1.00 0.00 C ATOM 441 C ILE 59 -8.313 -7.146 -2.130 1.00 0.00 C ATOM 442 O ILE 59 -9.070 -6.743 -3.022 1.00 0.00 O ATOM 443 CB ILE 59 -8.203 -4.947 -0.958 1.00 0.00 C ATOM 444 CG1 ILE 59 -7.228 -3.961 -0.262 1.00 0.00 C ATOM 445 CG2 ILE 59 -9.350 -5.304 -0.051 1.00 0.00 C ATOM 446 CD1 ILE 59 -6.624 -4.497 1.028 1.00 0.00 C ATOM 447 N SER 60 -8.139 -8.434 -1.803 1.00 0.00 N ATOM 448 CA SER 60 -8.914 -9.517 -2.414 1.00 0.00 C ATOM 449 C SER 60 -10.367 -9.266 -2.050 1.00 0.00 C ATOM 450 O SER 60 -11.203 -9.367 -2.966 1.00 0.00 O ATOM 451 CB SER 60 -8.436 -10.907 -1.948 1.00 0.00 C ATOM 452 OG SER 60 -7.106 -11.243 -2.255 1.00 0.00 O ATOM 453 N GLN 61 -10.762 -9.220 -0.759 1.00 0.00 N ATOM 454 CA GLN 61 -12.075 -8.912 -0.305 1.00 0.00 C ATOM 455 C GLN 61 -11.994 -7.768 0.773 1.00 0.00 C ATOM 456 O GLN 61 -11.691 -8.032 1.933 1.00 0.00 O ATOM 457 CB GLN 61 -12.726 -10.169 0.261 1.00 0.00 C ATOM 458 CG GLN 61 -12.930 -11.418 -0.548 1.00 0.00 C ATOM 459 CD GLN 61 -13.981 -11.322 -1.653 1.00 0.00 C ATOM 460 OE1 GLN 61 -14.661 -10.321 -1.876 1.00 0.00 O ATOM 461 NE2 GLN 61 -14.204 -12.379 -2.408 1.00 0.00 N ATOM 462 N VAL 62 -12.418 -6.575 0.345 1.00 0.00 N ATOM 463 CA VAL 62 -12.563 -5.355 1.184 1.00 0.00 C ATOM 464 C VAL 62 -13.823 -5.540 2.064 1.00 0.00 C ATOM 465 O VAL 62 -13.771 -5.191 3.223 1.00 0.00 O ATOM 466 CB VAL 62 -12.735 -4.180 0.266 1.00 0.00 C ATOM 467 CG1 VAL 62 -12.336 -4.452 -1.165 1.00 0.00 C ATOM 468 CG2 VAL 62 -14.179 -3.631 0.312 1.00 0.00 C ATOM 469 N THR 63 -14.903 -6.102 1.568 1.00 0.00 N ATOM 470 CA THR 63 -16.203 -6.298 2.288 1.00 0.00 C ATOM 471 C THR 63 -16.891 -4.944 2.689 1.00 0.00 C ATOM 472 O THR 63 -16.787 -4.545 3.852 1.00 0.00 O ATOM 473 CB THR 63 -15.918 -7.273 3.497 1.00 0.00 C ATOM 474 OG1 THR 63 -15.473 -8.594 2.991 1.00 0.00 O ATOM 475 CG2 THR 63 -17.225 -7.515 4.332 1.00 0.00 C ATOM 476 N GLU 64 -17.636 -4.330 1.751 1.00 0.00 N ATOM 477 CA GLU 64 -18.233 -2.970 1.926 1.00 0.00 C ATOM 478 C GLU 64 -17.081 -2.179 2.663 1.00 0.00 C ATOM 479 O GLU 64 -15.928 -2.373 2.238 1.00 0.00 O ATOM 480 CB GLU 64 -19.458 -3.132 2.838 1.00 0.00 C ATOM 481 CG GLU 64 -20.555 -3.943 2.213 1.00 0.00 C ATOM 482 CD GLU 64 -21.797 -4.035 3.080 1.00 0.00 C ATOM 483 OE1 GLU 64 -21.861 -4.915 3.967 1.00 0.00 O ATOM 484 OE2 GLU 64 -22.725 -3.219 2.864 1.00 0.00 O ATOM 485 N ASP 65 -17.314 -1.079 3.294 1.00 0.00 N ATOM 486 CA ASP 65 -16.312 -0.453 4.142 1.00 0.00 C ATOM 487 C ASP 65 -16.085 -1.156 5.535 1.00 0.00 C ATOM 488 O ASP 65 -17.022 -1.068 6.345 1.00 0.00 O ATOM 489 CB ASP 65 -16.855 0.880 4.575 1.00 0.00 C ATOM 490 CG ASP 65 -15.948 1.931 5.259 1.00 0.00 C ATOM 491 OD1 ASP 65 -15.606 1.684 6.411 1.00 0.00 O ATOM 492 OD2 ASP 65 -15.572 2.945 4.679 1.00 0.00 O ATOM 493 N THR 66 -14.883 -1.403 5.971 1.00 0.00 N ATOM 494 CA THR 66 -14.651 -1.961 7.277 1.00 0.00 C ATOM 495 C THR 66 -13.182 -1.698 7.789 1.00 0.00 C ATOM 496 O THR 66 -12.281 -1.620 6.939 1.00 0.00 O ATOM 497 CB THR 66 -15.210 -3.416 7.457 1.00 0.00 C ATOM 498 OG1 THR 66 -14.544 -4.257 6.400 1.00 0.00 O ATOM 499 CG2 THR 66 -16.771 -3.514 7.211 1.00 0.00 C ATOM 500 N SER 67 -12.938 -1.736 9.115 1.00 0.00 N ATOM 501 CA SER 67 -11.570 -1.603 9.612 1.00 0.00 C ATOM 502 C SER 67 -10.814 -2.888 9.241 1.00 0.00 C ATOM 503 O SER 67 -10.997 -3.930 9.894 1.00 0.00 O ATOM 504 CB SER 67 -11.534 -1.384 11.124 1.00 0.00 C ATOM 505 OG SER 67 -10.215 -1.172 11.688 1.00 0.00 O ATOM 506 N LYS 68 -9.849 -2.730 8.339 1.00 0.00 N ATOM 507 CA LYS 68 -9.083 -3.827 7.778 1.00 0.00 C ATOM 508 C LYS 68 -7.590 -3.446 7.668 1.00 0.00 C ATOM 509 O LYS 68 -7.269 -2.530 6.896 1.00 0.00 O ATOM 510 CB LYS 68 -9.664 -4.268 6.412 1.00 0.00 C ATOM 511 CG LYS 68 -8.915 -5.490 5.843 1.00 0.00 C ATOM 512 CD LYS 68 -9.589 -6.113 4.592 1.00 0.00 C ATOM 513 CE LYS 68 -10.587 -7.250 4.957 1.00 0.00 C ATOM 514 NZ LYS 68 -11.905 -6.759 5.423 1.00 0.00 N ATOM 515 N THR 69 -6.772 -4.267 8.361 1.00 0.00 N ATOM 516 CA THR 69 -5.324 -4.159 8.349 1.00 0.00 C ATOM 517 C THR 69 -4.768 -4.993 7.147 1.00 0.00 C ATOM 518 O THR 69 -4.738 -6.232 7.210 1.00 0.00 O ATOM 519 CB THR 69 -4.740 -4.516 9.736 1.00 0.00 C ATOM 520 OG1 THR 69 -3.357 -4.098 9.945 1.00 0.00 O ATOM 521 CG2 THR 69 -4.851 -6.028 10.089 1.00 0.00 C ATOM 522 N LEU 70 -4.192 -4.267 6.193 1.00 0.00 N ATOM 523 CA LEU 70 -3.685 -4.845 4.966 1.00 0.00 C ATOM 524 C LEU 70 -2.103 -4.853 5.097 1.00 0.00 C ATOM 525 O LEU 70 -1.517 -4.047 5.853 1.00 0.00 O ATOM 526 CB LEU 70 -4.090 -4.009 3.788 1.00 0.00 C ATOM 527 CG LEU 70 -5.573 -3.902 3.515 1.00 0.00 C ATOM 528 CD1 LEU 70 -6.319 -5.204 3.795 1.00 0.00 C ATOM 529 CD2 LEU 70 -6.247 -2.834 4.376 1.00 0.00 C ATOM 530 N GLU 71 -1.392 -5.875 4.548 1.00 0.00 N ATOM 531 CA GLU 71 0.076 -6.052 4.692 1.00 0.00 C ATOM 532 C GLU 71 0.874 -5.670 3.466 1.00 0.00 C ATOM 533 O GLU 71 0.402 -5.801 2.314 1.00 0.00 O ATOM 534 CB GLU 71 0.488 -7.419 5.286 1.00 0.00 C ATOM 535 CG GLU 71 2.006 -7.640 5.533 1.00 0.00 C ATOM 536 CD GLU 71 2.372 -8.819 6.478 1.00 0.00 C ATOM 537 OE1 GLU 71 1.489 -9.622 6.835 1.00 0.00 O ATOM 538 OE2 GLU 71 3.556 -8.914 6.865 1.00 0.00 O ATOM 539 N LEU 72 2.059 -5.107 3.787 1.00 0.00 N ATOM 540 CA LEU 72 2.896 -4.596 2.710 1.00 0.00 C ATOM 541 C LEU 72 3.755 -5.783 2.144 1.00 0.00 C ATOM 542 O LEU 72 5.003 -5.825 2.276 1.00 0.00 O ATOM 543 CB LEU 72 3.848 -3.623 3.481 1.00 0.00 C ATOM 544 CG LEU 72 3.205 -2.398 4.099 1.00 0.00 C ATOM 545 CD1 LEU 72 4.254 -1.527 4.778 1.00 0.00 C ATOM 546 CD2 LEU 72 2.412 -1.586 3.084 1.00 0.00 C ATOM 547 N LYS 73 3.066 -6.712 1.430 1.00 0.00 N ATOM 548 CA LYS 73 3.698 -7.869 0.775 1.00 0.00 C ATOM 549 C LYS 73 3.904 -7.523 -0.727 1.00 0.00 C ATOM 550 O LYS 73 2.970 -7.662 -1.539 1.00 0.00 O ATOM 551 CB LYS 73 2.904 -9.169 0.900 1.00 0.00 C ATOM 552 CG LYS 73 2.713 -9.584 2.354 1.00 0.00 C ATOM 553 CD LYS 73 1.798 -10.797 2.453 1.00 0.00 C ATOM 554 CE LYS 73 1.625 -11.256 3.896 1.00 0.00 C ATOM 555 NZ LYS 73 2.915 -11.705 4.492 1.00 0.00 N ATOM 556 N ALA 74 5.119 -7.191 -1.081 1.00 0.00 N ATOM 557 CA ALA 74 5.522 -6.762 -2.419 1.00 0.00 C ATOM 558 C ALA 74 6.828 -7.521 -2.848 1.00 0.00 C ATOM 559 O ALA 74 7.217 -8.492 -2.182 1.00 0.00 O ATOM 560 CB ALA 74 5.726 -5.227 -2.354 1.00 0.00 C ATOM 561 N GLU 75 7.255 -7.311 -4.113 1.00 0.00 N ATOM 562 CA GLU 75 8.510 -7.918 -4.549 1.00 0.00 C ATOM 563 C GLU 75 9.599 -7.767 -3.406 1.00 0.00 C ATOM 564 O GLU 75 10.114 -8.824 -3.015 1.00 0.00 O ATOM 565 CB GLU 75 8.986 -7.244 -5.842 1.00 0.00 C ATOM 566 CG GLU 75 8.040 -7.418 -6.999 1.00 0.00 C ATOM 567 CD GLU 75 8.520 -6.744 -8.271 1.00 0.00 C ATOM 568 OE1 GLU 75 8.230 -5.544 -8.475 1.00 0.00 O ATOM 569 OE2 GLU 75 9.190 -7.429 -9.081 1.00 0.00 O ATOM 570 N GLY 76 9.970 -6.541 -2.936 1.00 0.00 N ATOM 571 CA GLY 76 10.866 -6.498 -1.845 1.00 0.00 C ATOM 572 C GLY 76 10.981 -5.127 -1.224 1.00 0.00 C ATOM 573 O GLY 76 11.614 -4.271 -1.854 1.00 0.00 O ATOM 574 N VAL 77 11.039 -5.193 0.091 1.00 0.00 N ATOM 575 CA VAL 77 11.074 -4.047 0.996 1.00 0.00 C ATOM 576 C VAL 77 11.229 -4.629 2.447 1.00 0.00 C ATOM 577 O VAL 77 10.558 -5.619 2.819 1.00 0.00 O ATOM 578 CB VAL 77 9.729 -3.261 0.843 1.00 0.00 C ATOM 579 CG1 VAL 77 9.804 -2.035 1.801 1.00 0.00 C ATOM 580 CG2 VAL 77 9.536 -2.813 -0.562 1.00 0.00 C ATOM 581 N THR 78 11.625 -3.757 3.312 1.00 0.00 N ATOM 582 CA THR 78 11.729 -3.947 4.735 1.00 0.00 C ATOM 583 C THR 78 11.075 -2.737 5.393 1.00 0.00 C ATOM 584 O THR 78 11.680 -1.652 5.514 1.00 0.00 O ATOM 585 CB THR 78 13.158 -4.166 5.328 1.00 0.00 C ATOM 586 OG1 THR 78 14.039 -4.933 4.580 1.00 0.00 O ATOM 587 CG2 THR 78 12.975 -4.852 6.762 1.00 0.00 C ATOM 588 N VAL 79 9.951 -2.984 6.050 1.00 0.00 N ATOM 589 CA VAL 79 9.138 -1.994 6.725 1.00 0.00 C ATOM 590 C VAL 79 8.895 -2.508 8.184 1.00 0.00 C ATOM 591 O VAL 79 8.507 -3.693 8.327 1.00 0.00 O ATOM 592 CB VAL 79 7.774 -1.998 5.977 1.00 0.00 C ATOM 593 CG1 VAL 79 6.875 -0.882 6.648 1.00 0.00 C ATOM 594 CG2 VAL 79 7.961 -1.630 4.521 1.00 0.00 C ATOM 595 N GLN 80 8.750 -1.623 9.207 1.00 0.00 N ATOM 596 CA GLN 80 8.612 -2.035 10.632 1.00 0.00 C ATOM 597 C GLN 80 7.134 -2.495 10.948 1.00 0.00 C ATOM 598 O GLN 80 6.926 -3.722 10.866 1.00 0.00 O ATOM 599 CB GLN 80 9.092 -0.911 11.562 1.00 0.00 C ATOM 600 CG GLN 80 9.167 -1.356 13.018 1.00 0.00 C ATOM 601 CD GLN 80 9.642 -0.236 13.927 1.00 0.00 C ATOM 602 OE1 GLN 80 8.887 0.692 14.237 1.00 0.00 O ATOM 603 NE2 GLN 80 10.896 -0.308 14.360 1.00 0.00 N ATOM 604 N PRO 81 6.144 -1.722 11.379 1.00 0.00 N ATOM 605 CA PRO 81 4.862 -2.270 11.513 1.00 0.00 C ATOM 606 C PRO 81 4.228 -2.338 10.121 1.00 0.00 C ATOM 607 O PRO 81 4.015 -1.243 9.562 1.00 0.00 O ATOM 608 CB PRO 81 3.926 -1.411 12.319 1.00 0.00 C ATOM 609 CG PRO 81 4.641 -0.024 12.138 1.00 0.00 C ATOM 610 CD PRO 81 6.108 -0.277 11.889 1.00 0.00 C ATOM 611 N SER 82 4.558 -3.417 9.394 1.00 0.00 N ATOM 612 CA SER 82 3.863 -3.564 8.097 1.00 0.00 C ATOM 613 C SER 82 2.349 -3.771 8.362 1.00 0.00 C ATOM 614 O SER 82 1.709 -4.657 7.775 1.00 0.00 O ATOM 615 CB SER 82 4.522 -4.715 7.355 1.00 0.00 C ATOM 616 OG SER 82 4.414 -6.027 7.898 1.00 0.00 O ATOM 617 N THR 83 1.748 -2.635 8.834 1.00 0.00 N ATOM 618 CA THR 83 0.364 -2.496 9.201 1.00 0.00 C ATOM 619 C THR 83 -0.242 -1.274 8.516 1.00 0.00 C ATOM 620 O THR 83 0.187 -0.130 8.735 1.00 0.00 O ATOM 621 CB THR 83 0.219 -2.512 10.812 1.00 0.00 C ATOM 622 OG1 THR 83 0.683 -3.786 11.360 1.00 0.00 O ATOM 623 CG2 THR 83 -1.298 -2.338 11.180 1.00 0.00 C ATOM 624 N VAL 84 -1.177 -1.601 7.661 1.00 0.00 N ATOM 625 CA VAL 84 -1.886 -0.711 6.819 1.00 0.00 C ATOM 626 C VAL 84 -3.385 -0.818 7.149 1.00 0.00 C ATOM 627 O VAL 84 -3.847 -1.905 7.425 1.00 0.00 O ATOM 628 CB VAL 84 -1.636 -1.089 5.314 1.00 0.00 C ATOM 629 CG1 VAL 84 -2.749 -0.532 4.408 1.00 0.00 C ATOM 630 CG2 VAL 84 -0.249 -0.610 4.869 1.00 0.00 C ATOM 631 N LYS 85 -4.006 0.294 7.530 1.00 0.00 N ATOM 632 CA LYS 85 -5.466 0.238 7.799 1.00 0.00 C ATOM 633 C LYS 85 -6.267 0.849 6.675 1.00 0.00 C ATOM 634 O LYS 85 -6.664 2.054 6.705 1.00 0.00 O ATOM 635 CB LYS 85 -5.719 0.840 9.185 1.00 0.00 C ATOM 636 CG LYS 85 -7.199 0.706 9.595 1.00 0.00 C ATOM 637 CD LYS 85 -7.550 1.676 10.715 1.00 0.00 C ATOM 638 CE LYS 85 -8.992 1.509 11.174 1.00 0.00 C ATOM 639 NZ LYS 85 -9.135 1.735 12.641 1.00 0.00 N ATOM 640 N VAL 86 -6.817 -0.043 5.920 1.00 0.00 N ATOM 641 CA VAL 86 -7.618 0.248 4.744 1.00 0.00 C ATOM 642 C VAL 86 -9.071 -0.171 4.879 1.00 0.00 C ATOM 643 O VAL 86 -9.460 -1.337 4.846 1.00 0.00 O ATOM 644 CB VAL 86 -6.859 0.026 3.453 1.00 0.00 C ATOM 645 CG1 VAL 86 -7.573 0.295 2.188 1.00 0.00 C ATOM 646 CG2 VAL 86 -5.464 0.563 3.418 1.00 0.00 C ATOM 647 N ASN 87 -9.808 0.935 4.832 1.00 0.00 N ATOM 648 CA ASN 87 -11.239 1.082 5.116 1.00 0.00 C ATOM 649 C ASN 87 -11.900 1.398 3.782 1.00 0.00 C ATOM 650 O ASN 87 -12.181 2.570 3.507 1.00 0.00 O ATOM 651 CB ASN 87 -11.374 2.301 6.055 1.00 0.00 C ATOM 652 CG ASN 87 -12.867 2.479 6.452 1.00 0.00 C ATOM 653 OD1 ASN 87 -13.480 1.606 7.074 1.00 0.00 O ATOM 654 ND2 ASN 87 -13.433 3.622 6.084 1.00 0.00 N ATOM 655 N LEU 88 -12.540 0.434 3.172 1.00 0.00 N ATOM 656 CA LEU 88 -13.214 0.643 1.891 1.00 0.00 C ATOM 657 C LEU 88 -14.691 1.000 2.042 1.00 0.00 C ATOM 658 O LEU 88 -15.535 0.243 1.556 1.00 0.00 O ATOM 659 CB LEU 88 -13.088 -0.513 0.917 1.00 0.00 C ATOM 660 CG LEU 88 -13.479 -0.276 -0.517 1.00 0.00 C ATOM 661 CD1 LEU 88 -12.587 0.792 -1.122 1.00 0.00 C ATOM 662 CD2 LEU 88 -13.456 -1.577 -1.309 1.00 0.00 C ATOM 663 N LYS 89 -14.903 2.346 2.013 1.00 0.00 N ATOM 664 CA LYS 89 -16.198 2.989 2.140 1.00 0.00 C ATOM 665 C LYS 89 -17.101 2.619 0.975 1.00 0.00 C ATOM 666 O LYS 89 -16.908 3.175 -0.068 1.00 0.00 O ATOM 667 CB LYS 89 -16.032 4.506 2.197 1.00 0.00 C ATOM 668 CG LYS 89 -17.336 5.278 2.020 1.00 0.00 C ATOM 669 CD LYS 89 -18.267 5.080 3.210 1.00 0.00 C ATOM 670 CE LYS 89 -17.682 5.668 4.487 1.00 0.00 C ATOM 671 NZ LYS 89 -18.106 4.901 5.694 1.00 0.00 N ATOM 672 N VAL 90 -18.219 1.994 1.325 1.00 0.00 N ATOM 673 CA VAL 90 -19.195 1.698 0.261 1.00 0.00 C ATOM 674 C VAL 90 -19.650 3.026 -0.277 1.00 0.00 C ATOM 675 O VAL 90 -20.443 3.803 0.346 1.00 0.00 O ATOM 676 CB VAL 90 -20.359 0.870 0.757 1.00 0.00 C ATOM 677 CG1 VAL 90 -21.353 0.613 -0.376 1.00 0.00 C ATOM 678 CG2 VAL 90 -19.878 -0.451 1.342 1.00 0.00 C ATOM 679 N THR 91 -19.318 3.242 -1.514 1.00 0.00 N ATOM 680 CA THR 91 -19.682 4.467 -2.191 1.00 0.00 C ATOM 681 C THR 91 -20.908 4.152 -3.158 1.00 0.00 C ATOM 682 O THR 91 -20.747 3.738 -4.334 1.00 0.00 O ATOM 683 CB THR 91 -18.348 5.017 -2.762 1.00 0.00 C ATOM 684 OG1 THR 91 -17.273 5.239 -1.749 1.00 0.00 O ATOM 685 CG2 THR 91 -18.465 6.329 -3.536 1.00 0.00 C ATOM 686 N GLN 92 -22.133 4.411 -2.657 1.00 0.00 N ATOM 687 CA GLN 92 -23.380 4.092 -3.376 1.00 0.00 C ATOM 688 C GLN 92 -24.235 5.353 -3.322 1.00 0.00 C ATOM 689 O GLN 92 -25.026 5.553 -2.399 1.00 0.00 O ATOM 690 CB GLN 92 -24.036 2.877 -2.709 1.00 0.00 C ATOM 691 CG GLN 92 -25.319 2.470 -3.473 1.00 0.00 C ATOM 692 CD GLN 92 -25.980 1.254 -2.851 1.00 0.00 C ATOM 693 OE1 GLN 92 -25.898 1.038 -1.636 1.00 0.00 O ATOM 694 NE2 GLN 92 -26.637 0.444 -3.675 1.00 0.00 N ATOM 695 N LYS 93 -24.333 5.937 -4.478 1.00 0.00 N ATOM 696 CA LYS 93 -25.024 7.194 -4.753 1.00 0.00 C ATOM 697 C LYS 93 -25.333 7.235 -6.254 1.00 0.00 C ATOM 698 O LYS 93 -26.281 7.903 -6.675 1.00 0.00 O ATOM 699 CB LYS 93 -24.208 8.422 -4.370 1.00 0.00 C ATOM 700 CG LYS 93 -24.005 8.535 -2.858 1.00 0.00 C ATOM 701 CD LYS 93 -23.248 9.809 -2.503 1.00 0.00 C ATOM 702 CE LYS 93 -22.912 9.870 -1.018 1.00 0.00 C ATOM 703 NZ LYS 93 -22.273 11.165 -0.648 1.00 0.00 N ATOM 704 OXT LYS 93 -24.548 6.649 -7.030 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 644 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 66.19 56.5 170 100.0 170 ARMSMC SECONDARY STRUCTURE . . 42.75 67.9 106 100.0 106 ARMSMC SURFACE . . . . . . . . 68.29 55.2 116 100.0 116 ARMSMC BURIED . . . . . . . . 61.42 59.3 54 100.0 54 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.85 46.8 79 100.0 79 ARMSSC1 RELIABLE SIDE CHAINS . 81.97 48.5 66 100.0 66 ARMSSC1 SECONDARY STRUCTURE . . 89.86 39.2 51 100.0 51 ARMSSC1 SURFACE . . . . . . . . 83.40 48.2 56 100.0 56 ARMSSC1 BURIED . . . . . . . . 88.28 43.5 23 100.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.27 55.6 45 100.0 45 ARMSSC2 RELIABLE SIDE CHAINS . 63.39 61.1 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 69.76 57.7 26 100.0 26 ARMSSC2 SURFACE . . . . . . . . 64.97 54.3 35 100.0 35 ARMSSC2 BURIED . . . . . . . . 82.57 60.0 10 100.0 10 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.92 35.0 20 100.0 20 ARMSSC3 RELIABLE SIDE CHAINS . 77.73 37.5 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 74.14 30.8 13 100.0 13 ARMSSC3 SURFACE . . . . . . . . 73.37 36.8 19 100.0 19 ARMSSC3 BURIED . . . . . . . . 99.96 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.63 40.0 10 100.0 10 ARMSSC4 RELIABLE SIDE CHAINS . 87.63 40.0 10 100.0 10 ARMSSC4 SECONDARY STRUCTURE . . 67.69 50.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 87.63 40.0 10 100.0 10 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.79 (Number of atoms: 86) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.79 86 100.0 86 CRMSCA CRN = ALL/NP . . . . . 0.0441 CRMSCA SECONDARY STRUCTURE . . 3.53 53 100.0 53 CRMSCA SURFACE . . . . . . . . 3.83 59 100.0 59 CRMSCA BURIED . . . . . . . . 3.71 27 100.0 27 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.87 426 100.0 426 CRMSMC SECONDARY STRUCTURE . . 3.60 264 100.0 264 CRMSMC SURFACE . . . . . . . . 3.92 292 100.0 292 CRMSMC BURIED . . . . . . . . 3.76 134 100.0 134 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 4.97 300 30.9 971 CRMSSC RELIABLE SIDE CHAINS . 4.77 246 26.8 917 CRMSSC SECONDARY STRUCTURE . . 4.54 191 30.6 625 CRMSSC SURFACE . . . . . . . . 5.18 219 33.6 651 CRMSSC BURIED . . . . . . . . 4.38 81 25.3 320 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.40 644 49.0 1315 CRMSALL SECONDARY STRUCTURE . . 4.05 403 48.1 837 CRMSALL SURFACE . . . . . . . . 4.54 455 51.3 887 CRMSALL BURIED . . . . . . . . 4.03 189 44.2 428 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.593 1.000 0.500 86 100.0 86 ERRCA SECONDARY STRUCTURE . . 3.395 1.000 0.500 53 100.0 53 ERRCA SURFACE . . . . . . . . 3.625 1.000 0.500 59 100.0 59 ERRCA BURIED . . . . . . . . 3.521 1.000 0.500 27 100.0 27 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.657 1.000 0.500 426 100.0 426 ERRMC SECONDARY STRUCTURE . . 3.449 1.000 0.500 264 100.0 264 ERRMC SURFACE . . . . . . . . 3.701 1.000 0.500 292 100.0 292 ERRMC BURIED . . . . . . . . 3.562 1.000 0.500 134 100.0 134 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.507 1.000 0.500 300 30.9 971 ERRSC RELIABLE SIDE CHAINS . 4.339 1.000 0.500 246 26.8 917 ERRSC SECONDARY STRUCTURE . . 4.198 1.000 0.500 191 30.6 625 ERRSC SURFACE . . . . . . . . 4.671 1.000 0.500 219 33.6 651 ERRSC BURIED . . . . . . . . 4.063 1.000 0.500 81 25.3 320 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.038 1.000 0.500 644 49.0 1315 ERRALL SECONDARY STRUCTURE . . 3.784 1.000 0.500 403 48.1 837 ERRALL SURFACE . . . . . . . . 4.144 1.000 0.500 455 51.3 887 ERRALL BURIED . . . . . . . . 3.782 1.000 0.500 189 44.2 428 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 5 33 75 86 86 86 DISTCA CA (P) 0.00 5.81 38.37 87.21 100.00 86 DISTCA CA (RMS) 0.00 1.69 2.49 3.37 3.79 DISTCA ALL (N) 0 40 206 491 640 644 1315 DISTALL ALL (P) 0.00 3.04 15.67 37.34 48.67 1315 DISTALL ALL (RMS) 0.00 1.65 2.44 3.37 4.33 DISTALL END of the results output