####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 55 ( 444), selected 55 , name T0571TS436_1-D2 # Molecule2: number of CA atoms 135 ( 1036), selected 55 , name T0571-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0571TS436_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 205 - 222 4.92 23.57 LONGEST_CONTINUOUS_SEGMENT: 18 206 - 223 4.96 23.47 LCS_AVERAGE: 11.38 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 206 - 213 1.91 16.07 LCS_AVERAGE: 3.96 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 202 - 206 0.62 27.44 LONGEST_CONTINUOUS_SEGMENT: 5 207 - 211 0.53 17.05 LONGEST_CONTINUOUS_SEGMENT: 5 243 - 247 0.59 22.61 LCS_AVERAGE: 2.76 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 55 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT N 197 N 197 4 6 13 4 4 4 6 6 7 7 8 9 9 11 11 14 14 15 18 19 20 21 21 LCS_GDT P 198 P 198 4 6 13 4 4 4 6 6 7 10 10 10 10 11 11 14 14 15 18 19 20 21 21 LCS_GDT W 199 W 199 4 6 13 4 4 4 6 6 8 10 10 10 10 11 12 14 14 15 18 19 20 21 21 LCS_GDT H 200 H 200 4 7 13 4 4 4 6 6 8 10 10 10 10 11 12 14 14 15 18 19 20 21 21 LCS_GDT G 201 G 201 4 7 13 3 4 4 6 6 8 10 10 10 10 11 12 14 14 15 18 19 20 21 21 LCS_GDT E 202 E 202 5 7 13 3 5 5 6 6 8 10 10 10 10 11 12 13 14 15 16 18 19 21 21 LCS_GDT Y 203 Y 203 5 7 13 4 5 5 5 6 8 10 10 10 10 11 12 13 14 15 18 19 20 21 23 LCS_GDT L 204 L 204 5 7 13 4 5 5 5 6 8 10 10 10 10 12 12 14 14 16 18 20 22 25 26 LCS_GDT R 205 R 205 5 7 18 4 5 5 5 6 8 10 10 10 11 13 15 17 19 20 22 24 25 26 28 LCS_GDT R 206 R 206 5 8 18 4 5 5 6 7 8 10 10 10 12 13 15 18 21 22 24 27 30 32 33 LCS_GDT G 207 G 207 5 8 18 3 5 6 6 7 10 10 11 12 13 14 17 20 22 23 26 28 30 32 33 LCS_GDT I 208 I 208 5 8 18 3 5 6 6 8 10 10 11 12 13 14 17 20 22 23 26 28 30 32 33 LCS_GDT D 209 D 209 5 8 18 3 5 6 6 8 10 10 11 12 13 14 17 20 22 23 26 28 30 32 33 LCS_GDT H 210 H 210 5 8 18 3 5 6 6 8 10 10 11 12 13 14 17 20 22 23 26 28 30 32 33 LCS_GDT A 211 A 211 5 8 18 3 5 6 6 8 10 10 11 12 13 14 17 20 22 23 26 28 30 32 33 LCS_GDT T 212 T 212 4 8 18 3 4 6 6 8 10 10 11 12 13 14 17 20 22 23 26 28 30 32 33 LCS_GDT V 213 V 213 3 8 18 3 3 5 5 7 10 10 11 12 13 14 17 20 22 23 26 28 30 32 33 LCS_GDT A 214 A 214 3 4 18 3 3 3 3 4 4 6 8 11 13 14 15 17 17 21 23 26 30 30 33 LCS_GDT G 215 G 215 3 4 18 3 3 4 5 5 6 8 9 11 13 14 15 17 18 23 26 28 30 32 33 LCS_GDT T 216 T 216 3 4 18 1 3 4 5 5 6 8 9 11 13 14 15 17 18 19 24 28 30 30 32 LCS_GDT S 217 S 217 3 4 18 0 3 4 5 5 6 7 9 11 13 13 15 17 18 19 22 24 25 30 30 LCS_GDT K 218 K 218 3 3 18 0 3 3 3 4 6 8 9 11 13 14 15 18 19 21 26 28 30 32 33 LCS_GDT D 219 D 219 3 3 18 3 3 3 3 4 5 6 8 11 13 14 17 20 22 23 26 28 30 32 33 LCS_GDT I 220 I 220 3 3 18 3 3 3 3 3 6 6 8 10 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT I 221 I 221 3 4 18 3 3 4 4 4 5 6 8 11 12 14 16 18 19 23 26 28 30 32 33 LCS_GDT R 222 R 222 3 4 18 3 3 4 5 6 6 8 8 11 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT H 223 H 223 3 4 18 3 3 4 5 6 6 8 8 11 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT E 224 E 224 4 5 17 3 4 4 5 6 6 6 8 11 12 14 16 18 19 21 26 28 30 32 33 LCS_GDT Q 225 Q 225 4 5 17 3 4 4 4 4 5 6 8 9 9 13 15 16 17 19 20 24 25 30 31 LCS_GDT F 226 F 226 4 5 17 3 4 4 4 4 6 6 8 11 12 14 16 16 17 19 20 26 28 32 33 LCS_GDT V 227 V 227 4 5 17 3 4 4 5 6 6 8 8 11 12 13 16 20 22 23 26 28 30 32 33 LCS_GDT E 228 E 228 3 5 17 3 3 4 5 6 6 8 8 11 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT N 229 N 229 3 5 17 3 3 3 4 6 6 7 10 11 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT D 230 D 230 3 5 17 3 3 3 4 4 7 10 11 12 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT E 231 E 231 3 5 17 2 3 3 6 8 10 10 11 12 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT V 232 V 232 3 5 17 2 3 3 6 8 10 10 11 12 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT V 233 V 233 3 3 17 3 4 5 6 8 10 10 11 12 12 14 17 20 22 23 26 28 30 32 33 LCS_GDT N 234 N 234 3 3 17 3 4 5 6 6 6 7 9 11 12 14 15 17 19 22 24 26 29 32 33 LCS_GDT I 235 I 235 3 3 14 3 3 3 4 4 6 7 8 9 11 13 15 17 18 22 23 26 27 32 33 LCS_GDT S 236 S 236 3 3 14 3 3 3 4 5 6 8 8 9 11 13 15 16 18 22 23 26 27 32 33 LCS_GDT T 237 T 237 3 4 14 0 3 3 3 5 6 8 8 9 11 13 15 16 17 22 23 26 27 30 32 LCS_GDT K 238 K 238 3 6 14 0 3 3 5 6 6 8 8 9 11 13 15 16 17 19 21 23 27 29 31 LCS_GDT S 239 S 239 3 6 14 0 3 4 5 6 6 6 8 9 11 12 12 14 16 17 18 23 24 25 28 LCS_GDT M 240 M 240 3 6 14 3 3 4 5 6 6 8 8 9 11 12 15 15 17 19 21 23 25 27 28 LCS_GDT K 241 K 241 3 6 14 3 4 4 6 6 6 8 8 9 11 12 15 16 17 19 21 26 27 29 31 LCS_GDT D 242 D 242 3 6 14 3 4 4 6 6 6 8 8 9 11 13 15 16 17 19 21 26 27 29 31 LCS_GDT N 243 N 243 5 6 14 4 5 5 6 6 6 8 8 9 11 13 15 16 17 19 21 26 27 29 31 LCS_GDT L 244 L 244 5 5 14 4 5 5 5 5 6 7 8 8 11 13 15 17 18 22 23 26 27 30 32 LCS_GDT L 245 L 245 5 5 12 4 5 5 5 5 6 7 8 10 12 14 15 17 18 22 23 26 27 32 33 LCS_GDT T 246 T 246 5 5 12 4 5 5 5 7 9 10 11 12 12 14 17 19 22 22 26 28 30 32 33 LCS_GDT L 247 L 247 5 5 12 3 5 5 5 5 6 7 8 8 10 13 17 20 22 23 26 28 30 32 33 LCS_GDT K 248 K 248 3 4 9 3 3 3 4 4 6 7 8 8 12 12 17 20 22 23 26 28 30 32 33 LCS_GDT T 249 T 249 3 4 9 3 3 3 5 5 6 7 8 8 9 9 16 16 17 19 19 23 25 30 31 LCS_GDT K 250 K 250 3 4 9 3 3 3 4 5 6 8 8 11 12 12 16 16 21 23 26 28 30 30 32 LCS_GDT D 251 D 251 3 4 9 3 3 4 5 5 6 8 8 11 12 14 17 20 22 23 26 28 30 32 33 LCS_AVERAGE LCS_A: 6.03 ( 2.76 3.96 11.38 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 6 8 10 10 11 12 13 14 17 20 22 23 26 28 30 32 33 GDT PERCENT_AT 2.96 3.70 4.44 4.44 5.93 7.41 7.41 8.15 8.89 9.63 10.37 12.59 14.81 16.30 17.04 19.26 20.74 22.22 23.70 24.44 GDT RMS_LOCAL 0.21 0.53 1.02 1.02 1.67 2.07 2.07 2.42 2.69 3.51 3.44 4.33 5.27 5.38 5.64 5.93 6.20 6.42 7.21 7.27 GDT RMS_ALL_AT 27.64 17.05 16.66 16.66 16.42 16.87 16.87 16.39 16.53 25.81 16.43 16.48 17.42 17.05 17.59 17.46 17.69 17.71 15.92 15.97 # Checking swapping # possible swapping detected: Y 203 Y 203 # possible swapping detected: D 209 D 209 # possible swapping detected: E 228 E 228 # possible swapping detected: D 230 D 230 # possible swapping detected: E 231 E 231 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA N 197 N 197 39.499 0 0.110 1.025 40.083 0.000 0.000 LGA P 198 P 198 36.079 0 0.299 0.432 38.545 0.000 0.000 LGA W 199 W 199 34.564 0 0.098 1.225 38.310 0.000 0.000 LGA H 200 H 200 35.234 0 0.664 1.194 39.657 0.000 0.000 LGA G 201 G 201 30.909 0 0.168 0.168 31.954 0.000 0.000 LGA E 202 E 202 28.255 0 0.562 0.506 32.887 0.000 0.000 LGA Y 203 Y 203 22.693 0 0.072 1.122 27.288 0.000 0.000 LGA L 204 L 204 17.125 0 0.040 0.923 19.106 0.000 0.000 LGA R 205 R 205 12.572 0 0.057 1.225 15.772 0.000 0.000 LGA R 206 R 206 6.432 0 0.503 1.331 14.442 13.333 9.091 LGA G 207 G 207 3.234 0 0.062 0.062 3.555 57.738 57.738 LGA I 208 I 208 1.589 0 0.080 0.134 3.455 84.048 72.619 LGA D 209 D 209 0.787 0 0.050 0.687 4.243 92.857 74.464 LGA H 210 H 210 1.819 0 0.121 0.651 3.756 67.262 57.000 LGA A 211 A 211 1.945 0 0.675 0.607 3.966 63.452 65.333 LGA T 212 T 212 0.864 0 0.083 0.585 3.597 79.524 69.048 LGA V 213 V 213 3.171 0 0.338 0.270 7.188 41.905 30.340 LGA A 214 A 214 7.351 0 0.460 0.453 9.349 11.905 9.810 LGA G 215 G 215 10.772 0 0.696 0.696 13.495 0.714 0.714 LGA T 216 T 216 13.417 0 0.554 1.029 15.754 0.000 0.000 LGA S 217 S 217 16.067 0 0.614 0.943 18.582 0.000 0.000 LGA K 218 K 218 13.490 0 0.576 1.210 17.082 0.000 0.000 LGA D 219 D 219 10.341 0 0.579 1.207 12.401 0.119 0.060 LGA I 220 I 220 10.020 0 0.579 0.818 10.312 0.357 0.476 LGA I 221 I 221 12.493 0 0.622 1.388 17.124 0.000 0.000 LGA R 222 R 222 8.635 0 0.581 1.578 9.640 5.357 9.394 LGA H 223 H 223 9.047 0 0.589 1.006 14.571 1.548 0.619 LGA E 224 E 224 11.584 0 0.555 1.390 14.964 0.000 0.000 LGA Q 225 Q 225 15.422 0 0.231 0.970 23.672 0.000 0.000 LGA F 226 F 226 12.540 0 0.605 0.563 21.307 0.714 0.260 LGA V 227 V 227 8.410 0 0.613 0.798 10.353 7.976 4.762 LGA E 228 E 228 6.373 0 0.552 1.582 7.031 20.000 20.794 LGA N 229 N 229 7.778 0 0.366 1.137 13.518 10.238 5.179 LGA D 230 D 230 5.212 0 0.479 1.110 8.199 32.976 23.274 LGA E 231 E 231 2.810 0 0.605 1.363 10.021 62.024 35.132 LGA V 232 V 232 2.391 0 0.602 0.697 6.885 72.976 49.796 LGA V 233 V 233 2.079 0 0.556 1.435 6.748 60.595 45.510 LGA N 234 N 234 7.193 0 0.588 0.936 8.814 10.476 9.881 LGA I 235 I 235 11.358 0 0.550 0.764 13.404 0.119 0.060 LGA S 236 S 236 10.397 0 0.572 0.775 11.258 0.000 1.429 LGA T 237 T 237 14.649 0 0.638 0.871 16.519 0.000 0.000 LGA K 238 K 238 19.181 0 0.106 1.075 25.875 0.000 0.000 LGA S 239 S 239 19.274 0 0.366 0.443 19.661 0.000 0.000 LGA M 240 M 240 23.095 0 0.488 1.241 25.385 0.000 0.000 LGA K 241 K 241 25.897 0 0.213 0.911 33.641 0.000 0.000 LGA D 242 D 242 23.800 0 0.602 1.427 25.487 0.000 0.000 LGA N 243 N 243 21.471 0 0.120 1.222 25.038 0.000 0.000 LGA L 244 L 244 14.557 0 0.249 0.823 17.200 0.000 0.000 LGA L 245 L 245 10.739 0 0.626 0.907 14.281 2.381 1.190 LGA T 246 T 246 3.879 0 0.507 0.556 6.219 25.952 38.367 LGA L 247 L 247 7.819 0 0.699 1.098 11.407 8.571 6.131 LGA K 248 K 248 10.608 0 0.110 0.700 13.661 0.357 0.159 LGA T 249 T 249 15.953 0 0.443 0.592 20.098 0.000 0.000 LGA K 250 K 250 14.218 0 0.116 0.873 16.510 0.000 0.000 LGA D 251 D 251 13.218 0 0.203 0.275 13.395 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 55 220 220 100.00 444 444 100.00 135 SUMMARY(RMSD_GDC): 13.616 13.476 14.573 6.189 5.175 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 55 135 4.0 11 2.42 8.889 7.491 0.436 LGA_LOCAL RMSD: 2.421 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.387 Number of assigned atoms: 55 Std_ASGN_ATOMS RMSD: 13.616 Standard rmsd on all 55 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.332263 * X + 0.759040 * Y + -0.559875 * Z + 16.567781 Y_new = 0.817223 * X + -0.064682 * Y + -0.572680 * Z + 9.751387 Z_new = -0.470901 * X + -0.647823 * Y + -0.598814 * Z + -37.420055 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.956958 0.490312 -2.316902 [DEG: 112.1254 28.0928 -132.7487 ] ZXZ: -0.774092 2.212815 -2.513041 [DEG: -44.3522 126.7850 -143.9866 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0571TS436_1-D2 REMARK 2: T0571-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0571TS436_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 55 135 4.0 11 2.42 7.491 13.62 REMARK ---------------------------------------------------------- MOLECULE T0571TS436_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0571 REMARK MODEL 1 REFINED REMARK PARENT 3GK7_A ATOM 3068 N ASN 197 5.827 40.486 -15.940 1.00 0.10 N ATOM 3069 CA ASN 197 7.028 41.146 -16.262 1.00 0.24 C ATOM 3070 C ASN 197 7.700 41.769 -15.025 1.00 0.27 C ATOM 3071 O ASN 197 7.007 42.173 -14.078 1.00 0.28 O ATOM 3072 CB ASN 197 6.690 42.280 -17.277 1.00 0.54 C ATOM 3077 CG ASN 197 6.146 41.712 -18.609 1.00 1.50 C ATOM 3078 OD1 ASN 197 5.106 41.097 -18.629 1.00 1.50 O ATOM 3079 ND2 ASN 197 6.843 41.906 -19.790 1.00 1.50 N ATOM 3082 N PRO 198 9.030 41.950 -15.005 1.00 0.43 N ATOM 3083 CA PRO 198 9.708 42.677 -13.916 1.00 0.56 C ATOM 3084 C PRO 198 8.978 44.000 -13.669 1.00 0.63 C ATOM 3085 O PRO 198 8.382 44.125 -12.576 1.00 1.25 O ATOM 3086 CB PRO 198 11.192 42.801 -14.356 1.00 0.51 C ATOM 3087 CG PRO 198 11.171 42.667 -15.892 1.00 1.01 C ATOM 3088 CD PRO 198 9.961 41.733 -16.140 1.00 3.72 C ATOM 3096 N TRP 199 8.853 44.824 -14.663 1.00 0.57 N ATOM 3097 CA TRP 199 8.156 46.049 -14.563 1.00 0.51 C ATOM 3098 C TRP 199 6.705 46.045 -13.965 1.00 0.37 C ATOM 3099 O TRP 199 6.144 47.152 -13.873 1.00 0.35 O ATOM 3100 CB TRP 199 8.013 46.613 -16.013 1.00 0.44 C ATOM 3101 CG TRP 199 9.278 46.524 -16.899 1.00 0.34 C ATOM 3106 CD1 TRP 199 9.460 45.682 -17.997 1.00 1.50 C ATOM 3107 CD2 TRP 199 10.425 47.294 -16.811 1.00 1.50 C ATOM 3108 NE1 TRP 199 10.673 45.929 -18.543 1.00 1.50 N ATOM 3109 CE2 TRP 199 11.266 46.907 -17.835 1.00 1.50 C ATOM 3110 CE3 TRP 199 10.772 48.318 -15.926 1.00 1.50 C ATOM 3111 CZ2 TRP 199 12.509 47.512 -18.029 1.00 1.50 C ATOM 3112 CZ3 TRP 199 12.019 48.946 -16.106 1.00 1.50 C ATOM 3113 CH2 TRP 199 12.882 48.543 -17.148 1.00 1.50 H ATOM 3120 N HIS 200 6.133 44.925 -13.596 1.00 0.74 N ATOM 3121 CA HIS 200 4.821 44.901 -13.048 1.00 0.62 C ATOM 3122 C HIS 200 4.870 44.364 -11.589 1.00 0.59 C ATOM 3123 O HIS 200 3.856 44.494 -10.879 1.00 0.55 O ATOM 3124 CB HIS 200 3.938 43.908 -13.852 1.00 0.59 C ATOM 3125 CG HIS 200 3.680 44.211 -15.341 1.00 0.43 C ATOM 3130 ND1 HIS 200 2.986 43.300 -16.221 1.00 1.50 N ATOM 3131 CD2 HIS 200 4.019 45.317 -16.084 1.00 1.50 C ATOM 3132 CE1 HIS 200 2.938 43.851 -17.418 1.00 1.50 C ATOM 3133 NE2 HIS 200 3.573 45.168 -17.469 1.00 1.50 N ATOM 3137 N GLY 201 5.932 43.721 -11.188 1.00 0.67 N ATOM 3138 CA GLY 201 5.949 43.001 -9.973 1.00 0.71 C ATOM 3139 C GLY 201 6.102 43.922 -8.752 1.00 0.57 C ATOM 3140 O GLY 201 7.024 44.753 -8.792 1.00 0.83 O ATOM 3144 N GLU 202 5.313 43.780 -7.713 1.00 0.59 N ATOM 3145 CA GLU 202 5.447 44.622 -6.579 1.00 0.45 C ATOM 3146 C GLU 202 6.062 43.932 -5.365 1.00 0.48 C ATOM 3147 O GLU 202 7.197 44.314 -5.018 1.00 1.00 O ATOM 3148 CB GLU 202 4.123 45.297 -6.134 1.00 0.89 C ATOM 3149 CG GLU 202 4.430 46.536 -5.234 1.00 1.18 C ATOM 3156 CD GLU 202 3.184 47.130 -4.596 1.00 1.50 C ATOM 3157 OE1 GLU 202 2.525 46.430 -3.798 1.00 1.50 O ATOM 3158 OE2 GLU 202 2.817 48.305 -4.861 1.00 1.50 O ATOM 3159 N TYR 203 5.364 43.066 -4.698 1.00 0.25 N ATOM 3160 CA TYR 203 5.907 42.423 -3.564 1.00 0.20 C ATOM 3161 C TYR 203 6.040 40.944 -3.862 1.00 0.23 C ATOM 3162 O TYR 203 5.133 40.347 -4.486 1.00 0.30 O ATOM 3163 CB TYR 203 5.013 42.539 -2.308 1.00 0.26 C ATOM 3164 CG TYR 203 5.043 43.921 -1.682 1.00 0.37 C ATOM 3165 CD1 TYR 203 3.953 44.784 -1.849 1.00 0.54 C ATOM 3166 CD2 TYR 203 6.131 44.326 -0.889 1.00 0.53 C ATOM 3167 CE1 TYR 203 3.955 46.048 -1.248 1.00 0.61 C ATOM 3168 CE2 TYR 203 6.107 45.576 -0.258 1.00 0.61 C ATOM 3169 CZ TYR 203 5.030 46.444 -0.447 1.00 0.58 C ATOM 3170 OH TYR 203 5.018 47.614 0.129 1.00 0.65 H ATOM 3180 N LEU 204 7.087 40.384 -3.372 1.00 0.22 N ATOM 3181 CA LEU 204 7.256 38.996 -3.376 1.00 0.30 C ATOM 3182 C LEU 204 7.338 38.518 -1.939 1.00 0.33 C ATOM 3183 O LEU 204 8.213 39.021 -1.200 1.00 0.27 O ATOM 3184 CB LEU 204 8.585 38.687 -4.093 1.00 0.46 C ATOM 3185 CG LEU 204 8.761 37.228 -4.624 1.00 0.19 C ATOM 3190 CD1 LEU 204 10.090 37.146 -5.433 1.00 1.50 C ATOM 3191 CD2 LEU 204 8.756 36.152 -3.511 1.00 1.50 C ATOM 3199 N ARG 205 6.512 37.595 -1.570 1.00 0.43 N ATOM 3200 CA ARG 205 6.596 37.026 -0.283 1.00 0.32 C ATOM 3201 C ARG 205 6.943 35.542 -0.287 1.00 0.31 C ATOM 3202 O ARG 205 6.211 34.684 -0.831 1.00 0.54 O ATOM 3203 CB ARG 205 5.246 37.231 0.416 1.00 0.27 C ATOM 3208 CG ARG 205 5.272 36.742 1.908 1.00 1.50 C ATOM 3211 CD ARG 205 4.153 35.713 2.219 1.00 1.50 C ATOM 3214 NE ARG 205 4.241 34.573 1.391 1.00 1.50 N ATOM 3216 CZ ARG 205 4.113 33.256 1.836 1.00 1.50 C ATOM 3217 NH1 ARG 205 4.097 32.298 0.943 1.00 1.50 H ATOM 3218 NH2 ARG 205 3.997 32.936 3.104 1.00 1.50 H ATOM 3223 N ARG 206 8.013 35.284 0.378 1.00 0.36 N ATOM 3224 CA ARG 206 8.252 34.036 0.981 1.00 0.60 C ATOM 3225 C ARG 206 8.433 34.522 2.463 1.00 1.28 C ATOM 3226 O ARG 206 7.566 34.195 3.304 1.00 0.41 O ATOM 3227 CB ARG 206 9.525 33.381 0.337 1.00 0.36 C ATOM 3232 CG ARG 206 9.830 34.037 -1.059 1.00 1.50 C ATOM 3235 CD ARG 206 10.956 33.393 -1.907 1.00 1.50 C ATOM 3238 NE ARG 206 10.622 33.430 -3.272 1.00 1.50 N ATOM 3240 CZ ARG 206 9.756 32.534 -3.885 1.00 1.50 C ATOM 3241 NH1 ARG 206 8.876 31.856 -3.198 1.00 1.50 H ATOM 3242 NH2 ARG 206 9.814 32.376 -5.183 1.00 1.50 H ATOM 3247 N GLY 207 9.450 35.328 2.745 1.00 1.63 N ATOM 3248 CA GLY 207 9.275 36.538 3.494 1.00 1.18 C ATOM 3249 C GLY 207 9.407 37.739 2.507 1.00 0.55 C ATOM 3250 O GLY 207 9.581 37.469 1.299 1.00 1.07 O ATOM 3254 N ILE 208 9.297 38.975 2.945 1.00 0.36 N ATOM 3255 CA ILE 208 8.872 40.011 2.054 1.00 0.25 C ATOM 3256 C ILE 208 10.012 40.795 1.356 1.00 0.28 C ATOM 3257 O ILE 208 10.807 41.463 2.044 1.00 0.36 O ATOM 3258 CB ILE 208 7.908 41.042 2.752 1.00 0.35 C ATOM 3259 CG1 ILE 208 6.693 40.279 3.395 1.00 0.33 C ATOM 3260 CG2 ILE 208 7.387 42.120 1.735 1.00 0.35 C ATOM 3261 CD1 ILE 208 5.698 41.194 4.169 1.00 0.49 C ATOM 3273 N ASP 209 10.010 40.782 0.052 1.00 0.34 N ATOM 3274 CA ASP 209 10.863 41.572 -0.759 1.00 0.34 C ATOM 3275 C ASP 209 10.008 42.561 -1.588 1.00 0.40 C ATOM 3276 O ASP 209 9.017 42.107 -2.200 1.00 0.48 O ATOM 3277 CB ASP 209 11.702 40.690 -1.753 1.00 0.23 C ATOM 3282 CG ASP 209 11.429 39.160 -1.779 1.00 1.50 C ATOM 3283 OD1 ASP 209 11.699 38.509 -2.816 1.00 1.50 O ATOM 3284 OD2 ASP 209 10.974 38.556 -0.777 1.00 1.50 O ATOM 3285 N HIS 210 10.404 43.805 -1.662 1.00 0.30 N ATOM 3286 CA HIS 210 9.745 44.786 -2.451 1.00 0.38 C ATOM 3287 C HIS 210 10.549 44.978 -3.753 1.00 0.41 C ATOM 3288 O HIS 210 11.785 45.101 -3.668 1.00 0.56 O ATOM 3289 CB HIS 210 9.705 46.187 -1.748 1.00 0.37 C ATOM 3290 CG HIS 210 9.499 46.178 -0.216 1.00 0.73 C ATOM 3295 ND1 HIS 210 9.442 45.033 0.664 1.00 1.50 N ATOM 3296 CD2 HIS 210 9.342 47.296 0.566 1.00 1.50 C ATOM 3297 CE1 HIS 210 9.245 45.473 1.892 1.00 1.50 C ATOM 3298 NE2 HIS 210 9.167 46.933 1.972 1.00 1.50 N ATOM 3302 N ALA 211 9.934 45.042 -4.898 1.00 0.45 N ATOM 3303 CA ALA 211 10.588 45.235 -6.140 1.00 0.59 C ATOM 3304 C ALA 211 10.305 46.586 -6.841 1.00 0.46 C ATOM 3305 O ALA 211 11.006 46.929 -7.828 1.00 0.16 O ATOM 3306 CB ALA 211 10.209 44.070 -7.093 1.00 0.66 C ATOM 3312 N THR 212 9.304 47.286 -6.405 1.00 0.62 N ATOM 3313 CA THR 212 8.851 48.394 -7.151 1.00 0.47 C ATOM 3314 C THR 212 9.857 49.559 -7.155 1.00 0.42 C ATOM 3315 O THR 212 10.038 50.232 -6.121 1.00 0.56 O ATOM 3316 CB THR 212 7.459 48.874 -6.647 1.00 0.52 C ATOM 3320 OG1 THR 212 7.081 48.274 -5.317 1.00 1.50 O ATOM 3322 CG2 THR 212 6.346 48.654 -7.723 1.00 1.50 C ATOM 3326 N VAL 213 10.484 49.737 -8.280 1.00 0.53 N ATOM 3327 CA VAL 213 11.426 50.764 -8.487 1.00 0.59 C ATOM 3328 C VAL 213 12.655 50.451 -7.601 1.00 0.39 C ATOM 3329 O VAL 213 13.188 51.347 -6.923 1.00 0.59 O ATOM 3332 CB VAL 213 10.806 52.213 -8.435 1.00 1.50 C ATOM 3334 CG1 VAL 213 11.776 53.265 -9.071 1.00 1.50 C ATOM 3335 CG2 VAL 213 9.444 52.268 -9.211 1.00 1.50 C ATOM 3342 N ALA 214 13.055 49.211 -7.610 1.00 0.46 N ATOM 3343 CA ALA 214 14.230 48.767 -6.976 1.00 0.40 C ATOM 3344 C ALA 214 15.108 48.190 -8.105 1.00 0.45 C ATOM 3345 O ALA 214 14.622 47.306 -8.837 1.00 0.75 O ATOM 3346 CB ALA 214 13.822 47.655 -5.948 1.00 0.24 C ATOM 3352 N GLY 215 16.316 48.659 -8.266 1.00 0.22 N ATOM 3353 CA GLY 215 17.108 48.264 -9.376 1.00 0.09 C ATOM 3354 C GLY 215 17.450 46.760 -9.402 1.00 0.29 C ATOM 3355 O GLY 215 17.195 46.079 -8.386 1.00 0.38 O ATOM 3359 N THR 216 18.033 46.270 -10.470 1.00 0.38 N ATOM 3360 CA THR 216 18.341 44.886 -10.612 1.00 0.43 C ATOM 3361 C THR 216 19.092 44.397 -9.343 1.00 0.41 C ATOM 3362 O THR 216 18.539 43.528 -8.637 1.00 0.47 O ATOM 3363 CB THR 216 19.149 44.653 -11.942 1.00 0.53 C ATOM 3367 OG1 THR 216 20.415 45.469 -11.931 1.00 1.50 O ATOM 3369 CG2 THR 216 18.319 45.031 -13.206 1.00 1.50 C ATOM 3373 N SER 217 20.173 45.021 -8.972 1.00 0.42 N ATOM 3374 CA SER 217 20.842 44.694 -7.768 1.00 0.45 C ATOM 3375 C SER 217 19.971 44.658 -6.483 1.00 0.39 C ATOM 3376 O SER 217 20.138 43.695 -5.692 1.00 0.40 O ATOM 3377 CB SER 217 21.979 45.733 -7.552 1.00 0.61 C ATOM 3382 OG SER 217 22.882 45.295 -6.431 1.00 1.50 O ATOM 3384 N LYS 218 19.057 45.593 -6.305 1.00 0.29 N ATOM 3385 CA LYS 218 18.318 45.615 -5.108 1.00 0.24 C ATOM 3386 C LYS 218 17.270 44.488 -5.165 1.00 0.12 C ATOM 3387 O LYS 218 17.210 43.699 -4.207 1.00 0.44 O ATOM 3388 CB LYS 218 17.550 46.957 -4.955 1.00 0.50 C ATOM 3389 CG LYS 218 18.460 48.213 -4.766 1.00 0.84 C ATOM 3396 CD LYS 218 19.035 48.318 -3.319 1.00 1.50 C ATOM 3399 CE LYS 218 19.803 49.657 -3.118 1.00 1.50 C ATOM 3402 NZ LYS 218 20.308 49.791 -1.705 1.00 1.50 N ATOM 3406 N ASP 219 16.595 44.336 -6.237 1.00 0.14 N ATOM 3407 CA ASP 219 15.753 43.219 -6.415 1.00 0.07 C ATOM 3408 C ASP 219 16.458 41.870 -6.072 1.00 0.13 C ATOM 3409 O ASP 219 15.965 41.141 -5.189 1.00 0.15 O ATOM 3410 CB ASP 219 15.283 43.222 -7.905 1.00 0.19 C ATOM 3411 CG ASP 219 14.196 44.230 -8.289 1.00 0.21 C ATOM 3416 OD1 ASP 219 13.781 44.284 -9.477 1.00 1.50 O ATOM 3417 OD2 ASP 219 13.708 44.993 -7.423 1.00 1.50 O ATOM 3418 N ILE 220 17.586 41.618 -6.670 1.00 0.13 N ATOM 3419 CA ILE 220 18.407 40.471 -6.426 1.00 0.31 C ATOM 3420 C ILE 220 18.760 40.314 -4.932 1.00 0.24 C ATOM 3421 O ILE 220 18.356 39.290 -4.347 1.00 0.27 O ATOM 3422 CB ILE 220 19.642 40.721 -7.340 1.00 0.66 C ATOM 3426 CG1 ILE 220 19.096 40.546 -8.801 1.00 1.50 C ATOM 3429 CG2 ILE 220 20.922 39.966 -6.922 1.00 1.50 C ATOM 3433 CD1 ILE 220 20.030 40.836 -9.989 1.00 1.50 C ATOM 3437 N ILE 221 19.438 41.247 -4.328 1.00 0.39 N ATOM 3438 CA ILE 221 19.844 41.070 -2.985 1.00 0.42 C ATOM 3439 C ILE 221 18.592 40.909 -2.061 1.00 0.30 C ATOM 3440 O ILE 221 18.582 39.960 -1.254 1.00 0.21 O ATOM 3441 CB ILE 221 20.800 42.232 -2.524 1.00 0.82 C ATOM 3445 CG1 ILE 221 20.160 43.659 -2.488 1.00 1.50 C ATOM 3448 CG2 ILE 221 22.123 42.220 -3.361 1.00 1.50 C ATOM 3452 CD1 ILE 221 19.610 44.082 -1.093 1.00 1.50 C ATOM 3456 N ARG 222 17.551 41.687 -2.246 1.00 0.43 N ATOM 3457 CA ARG 222 16.332 41.504 -1.543 1.00 0.42 C ATOM 3458 C ARG 222 15.816 40.049 -1.701 1.00 0.42 C ATOM 3459 O ARG 222 15.742 39.355 -0.672 1.00 0.83 O ATOM 3460 CB ARG 222 15.282 42.572 -2.024 1.00 0.46 C ATOM 3465 CG ARG 222 14.364 43.053 -0.858 1.00 1.50 C ATOM 3468 CD ARG 222 15.030 44.179 -0.006 1.00 1.50 C ATOM 3471 NE ARG 222 14.413 44.242 1.262 1.00 1.50 N ATOM 3473 CZ ARG 222 14.933 43.632 2.406 1.00 1.50 C ATOM 3474 NH1 ARG 222 14.228 43.671 3.508 1.00 1.50 H ATOM 3475 NH2 ARG 222 16.095 43.018 2.423 1.00 1.50 H ATOM 3480 N HIS 223 15.602 39.571 -2.897 1.00 0.21 N ATOM 3481 CA HIS 223 15.210 38.227 -3.126 1.00 0.29 C ATOM 3482 C HIS 223 16.082 37.170 -2.425 1.00 0.30 C ATOM 3483 O HIS 223 15.547 36.332 -1.662 1.00 0.50 O ATOM 3484 CB HIS 223 15.248 37.952 -4.653 1.00 0.33 C ATOM 3485 CG HIS 223 14.087 38.544 -5.438 1.00 0.25 C ATOM 3490 ND1 HIS 223 13.672 38.062 -6.725 1.00 1.50 N ATOM 3491 CD2 HIS 223 13.263 39.574 -5.076 1.00 1.50 C ATOM 3492 CE1 HIS 223 12.593 38.735 -7.050 1.00 1.50 C ATOM 3493 NE2 HIS 223 12.224 39.761 -6.072 1.00 1.50 N ATOM 3497 N GLU 224 17.361 37.232 -2.614 1.00 0.14 N ATOM 3498 CA GLU 224 18.224 36.400 -1.879 1.00 0.12 C ATOM 3499 C GLU 224 17.887 36.470 -0.370 1.00 0.12 C ATOM 3500 O GLU 224 17.497 35.400 0.128 1.00 0.46 O ATOM 3501 CB GLU 224 19.700 36.747 -2.201 1.00 0.16 C ATOM 3506 CG GLU 224 20.762 36.045 -1.300 1.00 1.50 C ATOM 3509 CD GLU 224 20.972 36.841 0.010 1.00 1.50 C ATOM 3510 OE1 GLU 224 20.636 36.345 1.115 1.00 1.50 O ATOM 3511 OE2 GLU 224 21.473 37.995 -0.031 1.00 1.50 O ATOM 3512 N GLN 225 17.828 37.576 0.284 1.00 0.35 N ATOM 3513 CA GLN 225 17.450 37.638 1.660 1.00 0.28 C ATOM 3514 C GLN 225 16.092 36.976 2.077 1.00 0.18 C ATOM 3515 O GLN 225 15.761 37.078 3.272 1.00 0.63 O ATOM 3516 CB GLN 225 17.431 39.139 2.111 1.00 0.46 C ATOM 3517 CG GLN 225 18.797 39.891 1.947 1.00 0.48 C ATOM 3524 CD GLN 225 19.706 39.749 3.183 1.00 1.50 C ATOM 3525 OE1 GLN 225 19.972 40.723 3.851 1.00 1.50 O ATOM 3526 NE2 GLN 225 20.234 38.520 3.531 1.00 1.50 N ATOM 3529 N PHE 226 15.368 36.317 1.203 1.00 0.35 N ATOM 3530 CA PHE 226 14.223 35.565 1.565 1.00 0.36 C ATOM 3531 C PHE 226 14.255 34.167 0.943 1.00 0.28 C ATOM 3532 O PHE 226 13.322 33.401 1.243 1.00 0.55 O ATOM 3533 CB PHE 226 12.938 36.318 1.104 1.00 0.34 C ATOM 3538 CG PHE 226 12.920 37.615 1.912 1.00 1.50 C ATOM 3539 CD1 PHE 226 12.666 37.570 3.292 1.00 1.50 C ATOM 3540 CD2 PHE 226 13.292 38.834 1.326 1.00 1.50 C ATOM 3541 CE1 PHE 226 12.759 38.729 4.072 1.00 1.50 C ATOM 3542 CE2 PHE 226 13.418 39.986 2.111 1.00 1.50 C ATOM 3543 CZ PHE 226 13.142 39.937 3.482 1.00 1.50 C ATOM 3549 N VAL 227 15.224 33.832 0.135 1.00 0.14 N ATOM 3550 CA VAL 227 15.375 32.496 -0.284 1.00 0.19 C ATOM 3551 C VAL 227 15.782 31.598 0.916 1.00 0.07 C ATOM 3552 O VAL 227 16.213 32.111 1.976 1.00 0.16 O ATOM 3553 CB VAL 227 16.431 32.379 -1.448 1.00 0.43 C ATOM 3557 CG1 VAL 227 17.913 32.405 -0.980 1.00 1.50 C ATOM 3558 CG2 VAL 227 16.149 31.024 -2.199 1.00 1.50 C ATOM 3565 N GLU 228 15.639 30.323 0.752 1.00 0.18 N ATOM 3566 CA GLU 228 15.972 29.427 1.774 1.00 0.14 C ATOM 3567 C GLU 228 17.486 29.392 2.082 1.00 0.16 C ATOM 3568 O GLU 228 18.156 28.488 1.540 1.00 1.13 O ATOM 3569 CB GLU 228 15.568 27.981 1.350 1.00 0.26 C ATOM 3570 CG GLU 228 15.685 26.991 2.563 1.00 0.25 C ATOM 3571 OE2 GLU 228 14.839 24.720 2.487 1.00 1.64 O ATOM 3578 CD GLU 228 15.735 25.522 2.117 1.00 1.50 C ATOM 3579 OE1 GLU 228 16.683 25.117 1.393 1.00 1.50 O ATOM 3580 N ASN 229 17.952 30.223 2.973 1.00 0.93 N ATOM 3581 CA ASN 229 19.124 29.985 3.763 1.00 0.43 C ATOM 3582 C ASN 229 20.275 29.118 3.149 1.00 0.44 C ATOM 3583 O ASN 229 21.355 29.684 2.864 1.00 0.63 O ATOM 3584 CB ASN 229 18.768 29.470 5.190 1.00 0.49 C ATOM 3585 CG ASN 229 17.969 30.515 5.993 1.00 0.85 C ATOM 3590 OD1 ASN 229 16.843 30.269 6.360 1.00 1.50 O ATOM 3591 ND2 ASN 229 18.542 31.736 6.310 1.00 1.50 N ATOM 3594 N ASP 230 20.064 27.843 2.905 1.00 0.44 N ATOM 3595 CA ASP 230 20.988 27.082 2.151 1.00 0.67 C ATOM 3596 C ASP 230 21.298 27.818 0.845 1.00 0.94 C ATOM 3597 O ASP 230 22.417 28.360 0.681 1.00 2.08 O ATOM 3598 CB ASP 230 20.387 25.676 1.801 1.00 0.77 C ATOM 3599 CG ASP 230 20.200 24.788 3.052 1.00 0.65 C ATOM 3600 OD1 ASP 230 20.507 25.214 4.198 1.00 0.53 O ATOM 3601 OD2 ASP 230 19.760 23.606 2.953 1.00 0.67 O ATOM 3606 N GLU 231 20.304 27.929 0.049 1.00 0.26 N ATOM 3607 CA GLU 231 20.475 28.410 -1.255 1.00 0.36 C ATOM 3608 C GLU 231 20.869 29.900 -1.297 1.00 0.62 C ATOM 3609 O GLU 231 21.069 30.404 -2.427 1.00 0.89 O ATOM 3610 CB GLU 231 19.160 28.135 -2.032 1.00 0.37 C ATOM 3611 CG GLU 231 18.851 26.595 -2.056 1.00 0.46 C ATOM 3618 CD GLU 231 19.994 25.765 -2.675 1.00 1.50 C ATOM 3619 OE1 GLU 231 20.358 25.978 -3.860 1.00 1.50 O ATOM 3620 OE2 GLU 231 20.569 24.878 -1.991 1.00 1.50 O ATOM 3621 N VAL 232 21.082 30.540 -0.160 1.00 0.43 N ATOM 3622 CA VAL 232 21.506 31.875 -0.195 1.00 0.39 C ATOM 3623 C VAL 232 22.961 31.882 -0.646 1.00 0.35 C ATOM 3624 O VAL 232 23.245 32.670 -1.557 1.00 0.34 O ATOM 3625 CB VAL 232 21.417 32.528 1.224 1.00 0.31 C ATOM 3629 CG1 VAL 232 22.354 33.777 1.389 1.00 1.50 C ATOM 3630 CG2 VAL 232 19.978 32.906 1.672 1.00 1.50 C ATOM 3637 N VAL 233 23.818 31.066 -0.097 1.00 0.46 N ATOM 3638 CA VAL 233 25.182 31.109 -0.478 1.00 0.55 C ATOM 3639 C VAL 233 25.282 30.830 -2.000 1.00 0.61 C ATOM 3640 O VAL 233 25.866 31.672 -2.696 1.00 0.66 O ATOM 3641 CB VAL 233 26.060 30.157 0.390 1.00 0.70 C ATOM 3645 CG1 VAL 233 27.564 30.238 -0.034 1.00 1.50 C ATOM 3646 CG2 VAL 233 25.939 30.521 1.910 1.00 1.50 C ATOM 3653 N ASN 234 24.660 29.799 -2.507 1.00 0.60 N ATOM 3654 CA ASN 234 24.658 29.556 -3.907 1.00 0.62 C ATOM 3655 C ASN 234 24.063 30.726 -4.769 1.00 0.54 C ATOM 3656 O ASN 234 24.775 31.195 -5.685 1.00 0.41 O ATOM 3657 CB ASN 234 23.925 28.211 -4.179 1.00 0.68 C ATOM 3658 CG ASN 234 24.584 27.047 -3.400 1.00 0.91 C ATOM 3663 OD1 ASN 234 24.448 26.964 -2.202 1.00 1.50 O ATOM 3664 ND2 ASN 234 25.341 26.098 -4.064 1.00 1.50 N ATOM 3667 N ILE 235 22.887 31.247 -4.492 1.00 0.60 N ATOM 3668 CA ILE 235 22.444 32.457 -5.120 1.00 0.30 C ATOM 3669 C ILE 235 23.576 33.490 -5.012 1.00 0.28 C ATOM 3670 O ILE 235 24.227 33.737 -6.053 1.00 0.98 O ATOM 3671 CB ILE 235 21.048 32.861 -4.509 1.00 0.40 C ATOM 3672 CG1 ILE 235 19.986 31.971 -5.250 1.00 0.67 C ATOM 3673 CD1 ILE 235 18.708 31.714 -4.431 1.00 0.71 C ATOM 3679 CG2 ILE 235 20.631 34.343 -4.667 1.00 1.50 C ATOM 3686 N SER 236 23.943 33.916 -3.850 1.00 0.38 N ATOM 3687 CA SER 236 25.078 34.736 -3.723 1.00 0.53 C ATOM 3688 C SER 236 26.484 34.047 -4.057 1.00 1.32 C ATOM 3689 O SER 236 27.462 34.338 -3.342 1.00 2.83 O ATOM 3690 CB SER 236 25.102 35.278 -2.265 1.00 0.67 C ATOM 3695 OG SER 236 26.081 36.413 -2.125 1.00 1.50 O ATOM 3697 N THR 237 26.593 33.198 -5.069 1.00 0.71 N ATOM 3698 CA THR 237 27.812 32.913 -5.768 1.00 0.72 C ATOM 3699 C THR 237 27.564 32.890 -7.287 1.00 1.03 C ATOM 3700 O THR 237 28.535 32.895 -8.067 1.00 1.71 O ATOM 3701 CB THR 237 28.367 31.420 -5.467 1.00 0.85 C ATOM 3705 OG1 THR 237 27.354 30.336 -5.699 1.00 1.50 O ATOM 3707 CG2 THR 237 28.967 31.308 -4.029 1.00 1.50 C ATOM 3711 N LYS 238 26.298 32.761 -7.645 1.00 0.73 N ATOM 3712 CA LYS 238 25.896 33.480 -8.778 1.00 0.57 C ATOM 3713 C LYS 238 26.122 34.998 -8.398 1.00 1.23 C ATOM 3714 O LYS 238 26.118 35.793 -9.367 1.00 1.23 O ATOM 3715 CB LYS 238 24.474 32.886 -9.183 1.00 0.34 C ATOM 3716 CG LYS 238 24.504 31.324 -9.352 1.00 0.26 C ATOM 3717 CD LYS 238 25.404 30.758 -10.492 1.00 0.48 C ATOM 3726 CE LYS 238 24.920 31.174 -11.912 1.00 1.50 C ATOM 3729 NZ LYS 238 25.694 30.376 -12.964 1.00 1.50 N ATOM 3733 N SER 239 26.202 35.359 -7.082 1.00 1.76 N ATOM 3734 CA SER 239 27.277 36.115 -6.471 1.00 3.27 C ATOM 3735 C SER 239 28.616 36.371 -7.107 1.00 3.47 C ATOM 3736 O SER 239 29.490 35.457 -7.151 1.00 5.52 O ATOM 3737 CB SER 239 27.167 37.172 -5.298 1.00 3.17 C ATOM 3742 OG SER 239 28.301 37.025 -4.309 1.00 1.50 O ATOM 3744 CA MET 240 28.152 37.764 -8.829 1.00 1.50 C ATOM 3745 N MET 240 28.763 37.594 -7.601 1.00 1.50 N ATOM 3748 C MET 240 28.532 36.694 -9.889 1.00 1.50 C ATOM 3749 O MET 240 28.660 35.508 -9.524 1.00 1.50 O ATOM 3750 CB MET 240 26.745 38.471 -8.732 1.00 1.50 C ATOM 3753 CG MET 240 25.509 38.127 -7.760 1.00 1.50 C ATOM 3756 SD MET 240 24.632 39.433 -6.821 1.00 1.50 S ATOM 3757 CE MET 240 24.565 39.169 -5.002 1.00 1.50 C ATOM 3761 N LYS 241 28.717 37.060 -11.119 1.00 0.74 N ATOM 3762 CA LYS 241 28.920 36.136 -12.173 1.00 0.65 C ATOM 3763 C LYS 241 27.881 36.524 -13.240 1.00 1.04 C ATOM 3764 O LYS 241 28.294 36.760 -14.388 1.00 1.34 O ATOM 3765 CB LYS 241 28.925 34.569 -11.995 1.00 0.67 C ATOM 3766 CG LYS 241 30.248 33.936 -11.431 1.00 0.71 C ATOM 3767 CD LYS 241 30.413 32.437 -11.855 1.00 0.81 C ATOM 3768 CE LYS 241 29.225 31.533 -11.401 1.00 0.74 C ATOM 3769 NZ LYS 241 29.470 30.087 -11.836 1.00 1.47 N ATOM 3783 N ASP 242 26.620 36.631 -12.907 1.00 1.07 N ATOM 3784 CA ASP 242 25.807 37.576 -13.546 1.00 0.86 C ATOM 3785 C ASP 242 24.570 37.053 -14.258 1.00 3.15 C ATOM 3786 O ASP 242 23.978 37.818 -15.060 1.00 3.13 O ATOM 3787 CB ASP 242 25.537 38.760 -12.630 1.00 1.69 C ATOM 3788 CG ASP 242 24.906 39.951 -13.394 1.00 2.35 C ATOM 3793 OD1 ASP 242 23.664 40.003 -13.584 1.00 1.50 O ATOM 3794 OD2 ASP 242 25.645 40.848 -13.878 1.00 1.50 O ATOM 3795 CA ASN 243 22.981 35.843 -13.158 1.00 1.50 C ATOM 3796 N ASN 243 24.123 35.855 -13.950 1.00 1.50 N ATOM 3799 C ASN 243 23.388 36.367 -11.801 1.00 1.50 C ATOM 3800 O ASN 243 24.418 35.867 -11.303 1.00 1.50 O ATOM 3801 CB ASN 243 21.652 36.203 -13.883 1.00 1.50 C ATOM 3804 CG ASN 243 21.369 37.671 -14.256 1.00 1.50 C ATOM 3805 OD1 ASN 243 21.274 38.520 -13.398 1.00 1.50 O ATOM 3806 ND2 ASN 243 21.179 38.017 -15.580 1.00 1.50 N ATOM 3809 CA LEU 244 23.218 38.048 -10.149 1.00 1.50 C ATOM 3810 N LEU 244 22.746 37.348 -11.275 1.00 1.50 N ATOM 3813 C LEU 244 23.509 39.571 -10.369 1.00 1.50 C ATOM 3814 O LEU 244 22.806 40.164 -11.204 1.00 1.50 O ATOM 3815 CB LEU 244 22.352 37.833 -8.886 1.00 1.50 C ATOM 3818 CG LEU 244 22.240 36.516 -8.007 1.00 1.50 C ATOM 3819 CD1 LEU 244 22.705 36.583 -6.515 1.00 1.50 C ATOM 3820 CD2 LEU 244 22.722 35.183 -8.596 1.00 1.50 C ATOM 3828 CA LEU 245 24.760 41.593 -9.653 1.00 1.50 C ATOM 3829 N LEU 245 24.478 40.182 -9.670 1.00 1.50 N ATOM 3832 C LEU 245 25.813 42.099 -8.556 1.00 1.50 C ATOM 3833 O LEU 245 26.835 42.760 -8.881 1.00 1.50 O ATOM 3834 CB LEU 245 23.433 42.393 -9.359 1.00 1.50 C ATOM 3837 CG LEU 245 23.095 43.507 -10.401 1.00 1.50 C ATOM 3838 CD1 LEU 245 22.757 42.991 -11.833 1.00 1.50 C ATOM 3839 CD2 LEU 245 24.221 44.573 -10.444 1.00 1.50 C ATOM 3847 N THR 246 25.478 41.897 -7.304 1.00 4.51 N ATOM 3848 CA THR 246 26.217 42.223 -6.135 1.00 3.62 C ATOM 3849 C THR 246 25.920 43.684 -5.868 1.00 3.32 C ATOM 3850 O THR 246 25.182 43.994 -4.912 1.00 2.61 O ATOM 3851 CB THR 246 27.756 41.844 -6.005 1.00 1.50 C ATOM 3855 OG1 THR 246 28.140 40.721 -6.919 1.00 1.50 O ATOM 3857 CG2 THR 246 28.131 41.395 -4.554 1.00 1.50 C ATOM 3861 CA LEU 247 27.306 45.560 -6.156 1.00 1.50 C ATOM 3862 N LEU 247 26.496 44.522 -6.674 1.00 1.50 N ATOM 3865 C LEU 247 28.633 45.552 -6.980 1.00 1.50 C ATOM 3866 O LEU 247 29.455 46.446 -6.720 1.00 1.50 O ATOM 3867 CB LEU 247 27.701 45.482 -4.606 1.00 1.50 C ATOM 3870 CG LEU 247 27.059 46.554 -3.652 1.00 1.50 C ATOM 3871 CD1 LEU 247 25.519 46.398 -3.444 1.00 1.50 C ATOM 3872 CD2 LEU 247 27.410 48.012 -4.083 1.00 1.50 C ATOM 3880 CA LYS 248 30.206 44.415 -8.357 1.00 1.50 C ATOM 3881 N LYS 248 28.888 44.621 -7.876 1.00 1.50 N ATOM 3884 C LYS 248 30.630 45.583 -9.282 1.00 1.50 C ATOM 3885 O LYS 248 29.847 46.549 -9.427 1.00 1.50 O ATOM 3886 CB LYS 248 30.301 43.008 -9.068 1.00 1.50 C ATOM 3889 CG LYS 248 30.001 43.020 -10.604 1.00 1.50 C ATOM 3892 CD LYS 248 29.929 41.595 -11.236 1.00 1.50 C ATOM 3895 CE LYS 248 28.534 40.935 -11.078 1.00 1.50 C ATOM 3898 NZ LYS 248 27.473 41.756 -11.808 1.00 1.50 N ATOM 3902 CA THR 249 32.061 46.233 -11.075 1.00 1.50 C ATOM 3903 N THR 249 31.769 45.482 -9.906 1.00 1.50 N ATOM 3906 C THR 249 31.017 45.980 -12.221 1.00 1.50 C ATOM 3907 O THR 249 31.379 45.426 -13.278 1.00 1.50 O ATOM 3908 CB THR 249 33.544 45.908 -11.483 1.00 1.50 C ATOM 3910 OG1 THR 249 33.923 46.700 -12.706 1.00 1.50 O ATOM 3912 CG2 THR 249 33.841 44.390 -11.730 1.00 1.50 C ATOM 3916 CA LYS 250 28.709 45.982 -12.838 1.00 1.50 C ATOM 3917 N LYS 250 29.788 46.362 -12.008 1.00 1.50 N ATOM 3920 C LYS 250 28.610 46.856 -14.109 1.00 1.50 C ATOM 3921 O LYS 250 29.354 47.850 -14.223 1.00 1.50 O ATOM 3922 CB LYS 250 27.383 46.086 -12.004 1.00 1.50 C ATOM 3925 CG LYS 250 27.090 47.519 -11.430 1.00 1.50 C ATOM 3928 CD LYS 250 25.884 47.477 -10.443 1.00 1.50 C ATOM 3931 CE LYS 250 25.747 48.748 -9.559 1.00 1.50 C ATOM 3934 NZ LYS 250 24.631 48.515 -8.534 1.00 1.50 N ATOM 3938 CA ASP 251 27.466 47.269 -16.165 1.00 1.50 C ATOM 3939 N ASP 251 27.742 46.491 -15.014 1.00 1.50 N ATOM 3942 C ASP 251 25.951 47.531 -16.234 1.00 1.50 C ATOM 3943 O ASP 251 25.380 48.129 -15.321 1.00 1.50 O ATOM 3944 CB ASP 251 27.959 46.526 -17.449 1.00 1.50 C ATOM 3947 CG ASP 251 27.334 45.134 -17.695 1.00 1.50 C ATOM 3948 OD1 ASP 251 26.477 44.659 -16.903 1.00 1.50 O ATOM 3949 OD2 ASP 251 27.684 44.467 -18.705 1.00 1.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 444 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 101.64 26.9 108 40.3 268 ARMSMC SECONDARY STRUCTURE . . 102.64 26.4 72 40.0 180 ARMSMC SURFACE . . . . . . . . 104.82 22.4 67 40.9 164 ARMSMC BURIED . . . . . . . . 96.24 34.1 41 39.4 104 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.35 40.0 50 42.7 117 ARMSSC1 RELIABLE SIDE CHAINS . 79.52 39.1 46 43.8 105 ARMSSC1 SECONDARY STRUCTURE . . 79.19 39.4 33 40.2 82 ARMSSC1 SURFACE . . . . . . . . 86.59 34.4 32 45.1 71 ARMSSC1 BURIED . . . . . . . . 64.49 50.0 18 39.1 46 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.27 34.2 38 48.7 78 ARMSSC2 RELIABLE SIDE CHAINS . 81.71 40.7 27 50.0 54 ARMSSC2 SECONDARY STRUCTURE . . 72.68 39.1 23 45.1 51 ARMSSC2 SURFACE . . . . . . . . 90.28 29.2 24 51.1 47 ARMSSC2 BURIED . . . . . . . . 75.90 42.9 14 45.2 31 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.37 28.6 14 51.9 27 ARMSSC3 RELIABLE SIDE CHAINS . 76.99 30.8 13 54.2 24 ARMSSC3 SECONDARY STRUCTURE . . 71.94 37.5 8 50.0 16 ARMSSC3 SURFACE . . . . . . . . 87.57 27.3 11 50.0 22 ARMSSC3 BURIED . . . . . . . . 59.53 33.3 3 60.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 59.40 75.0 8 50.0 16 ARMSSC4 RELIABLE SIDE CHAINS . 59.40 75.0 8 50.0 16 ARMSSC4 SECONDARY STRUCTURE . . 10.51 100.0 6 54.5 11 ARMSSC4 SURFACE . . . . . . . . 74.53 60.0 5 38.5 13 ARMSSC4 BURIED . . . . . . . . 12.37 100.0 3 100.0 3 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 13.62 (Number of atoms: 55) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 13.62 55 40.7 135 CRMSCA CRN = ALL/NP . . . . . 0.2476 CRMSCA SECONDARY STRUCTURE . . 12.17 36 40.0 90 CRMSCA SURFACE . . . . . . . . 14.12 34 41.0 83 CRMSCA BURIED . . . . . . . . 12.75 21 40.4 52 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 13.62 272 41.0 664 CRMSMC SECONDARY STRUCTURE . . 12.08 178 40.0 445 CRMSMC SURFACE . . . . . . . . 14.17 169 41.4 408 CRMSMC BURIED . . . . . . . . 12.67 103 40.2 256 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 15.73 224 45.2 496 CRMSSC RELIABLE SIDE CHAINS . 15.80 186 45.4 410 CRMSSC SECONDARY STRUCTURE . . 13.64 141 41.3 341 CRMSSC SURFACE . . . . . . . . 15.79 136 46.4 293 CRMSSC BURIED . . . . . . . . 15.64 88 43.3 203 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 14.66 444 42.9 1036 CRMSALL SECONDARY STRUCTURE . . 12.83 285 40.7 701 CRMSALL SURFACE . . . . . . . . 14.89 272 43.5 625 CRMSALL BURIED . . . . . . . . 14.28 172 41.8 411 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.700 0.877 0.438 55 40.7 135 ERRCA SECONDARY STRUCTURE . . 10.660 0.861 0.431 36 40.0 90 ERRCA SURFACE . . . . . . . . 12.365 0.889 0.444 34 41.0 83 ERRCA BURIED . . . . . . . . 10.623 0.857 0.429 21 40.4 52 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.613 0.862 0.431 272 41.0 664 ERRMC SECONDARY STRUCTURE . . 10.515 0.848 0.424 178 40.0 445 ERRMC SURFACE . . . . . . . . 12.306 0.877 0.438 169 41.4 408 ERRMC BURIED . . . . . . . . 10.475 0.838 0.419 103 40.2 256 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.118 0.819 0.409 224 45.2 496 ERRSC RELIABLE SIDE CHAINS . 13.267 0.829 0.414 186 45.4 410 ERRSC SECONDARY STRUCTURE . . 11.457 0.796 0.398 141 41.3 341 ERRSC SURFACE . . . . . . . . 13.637 0.843 0.422 136 46.4 293 ERRSC BURIED . . . . . . . . 12.317 0.781 0.390 88 43.3 203 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.305 0.839 0.420 444 42.9 1036 ERRALL SECONDARY STRUCTURE . . 10.934 0.822 0.411 285 40.7 701 ERRALL SURFACE . . . . . . . . 12.842 0.858 0.429 272 43.5 625 ERRALL BURIED . . . . . . . . 11.457 0.810 0.405 172 41.8 411 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 1 21 55 135 DISTCA CA (P) 0.00 0.00 0.00 0.74 15.56 135 DISTCA CA (RMS) 0.00 0.00 0.00 4.33 7.86 DISTCA ALL (N) 0 0 2 17 146 444 1036 DISTALL ALL (P) 0.00 0.00 0.19 1.64 14.09 1036 DISTALL ALL (RMS) 0.00 0.00 2.61 4.07 7.87 DISTALL END of the results output