####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 63 ( 469), selected 63 , name T0571TS218_1_2-D2 # Molecule2: number of CA atoms 135 ( 1036), selected 63 , name T0571-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0571TS218_1_2-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 277 - 297 4.44 19.17 LCS_AVERAGE: 13.67 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 278 - 292 1.98 18.94 LONGEST_CONTINUOUS_SEGMENT: 15 279 - 293 1.77 19.03 LCS_AVERAGE: 6.81 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 279 - 288 0.95 19.01 LCS_AVERAGE: 4.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 63 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 232 V 232 5 9 14 2 5 5 7 9 9 10 11 13 15 18 20 21 25 28 31 34 36 37 38 LCS_GDT V 233 V 233 5 9 14 3 5 5 7 9 9 10 11 13 16 19 21 26 28 29 31 34 36 37 38 LCS_GDT N 234 N 234 5 9 14 3 5 5 7 9 9 10 12 15 17 19 22 26 28 29 31 34 36 37 38 LCS_GDT I 235 I 235 5 9 14 3 5 5 7 9 12 16 17 19 20 21 22 26 28 29 31 34 36 37 38 LCS_GDT S 236 S 236 5 9 14 4 5 8 9 9 11 12 16 19 20 21 22 26 28 29 31 34 36 37 38 LCS_GDT T 237 T 237 5 9 14 4 5 5 9 9 11 12 13 19 20 21 22 26 28 29 31 34 36 37 38 LCS_GDT K 238 K 238 5 9 14 4 5 5 7 9 9 10 12 13 16 18 20 21 25 28 31 34 36 37 38 LCS_GDT S 239 S 239 5 9 14 4 5 5 7 9 11 12 13 19 20 21 22 25 28 29 31 34 36 37 38 LCS_GDT M 240 M 240 5 9 14 3 4 5 6 9 15 16 17 19 20 21 22 26 28 29 31 33 36 37 38 LCS_GDT K 241 K 241 3 7 19 3 5 5 7 9 9 15 17 19 20 21 22 26 28 29 31 34 36 37 38 LCS_GDT D 242 D 242 3 4 19 3 3 4 8 8 12 13 14 14 17 20 22 26 28 29 31 34 36 37 38 LCS_GDT N 243 N 243 3 4 19 0 3 3 3 10 12 13 14 17 18 20 22 26 28 29 31 34 36 37 38 LCS_GDT L 244 L 244 3 3 19 0 3 3 3 4 6 8 10 12 16 18 20 21 25 28 31 34 36 37 38 LCS_GDT L 245 L 245 3 3 19 0 3 5 5 7 7 10 13 14 16 18 19 21 25 28 31 34 36 37 38 LCS_GDT T 246 T 246 3 3 19 1 3 5 5 7 7 8 10 14 16 18 22 23 25 28 31 34 36 37 38 LCS_GDT L 247 L 247 3 7 19 1 3 8 10 11 12 13 13 15 17 18 22 23 25 28 31 34 36 37 38 LCS_GDT K 248 K 248 5 7 19 0 4 9 10 11 12 13 13 15 17 18 22 23 23 27 31 34 36 37 38 LCS_GDT T 249 T 249 5 7 19 3 7 9 10 11 12 13 13 15 17 18 22 23 24 27 31 34 36 37 38 LCS_GDT K 250 K 250 5 7 19 3 4 5 6 7 9 11 13 14 17 18 22 23 25 28 31 34 36 37 38 LCS_GDT D 251 D 251 5 7 19 3 4 5 6 7 9 11 13 14 16 18 22 23 25 28 31 34 36 37 38 LCS_GDT E 252 E 252 5 7 19 2 4 5 6 7 9 11 13 14 16 18 22 23 25 28 31 34 36 37 38 LCS_GDT S 253 S 253 4 7 19 3 3 5 6 7 9 11 13 14 16 18 20 21 25 28 31 34 36 37 38 LCS_GDT G 254 G 254 4 6 19 3 3 4 5 6 7 11 13 14 16 18 20 21 25 28 31 34 36 37 38 LCS_GDT K 255 K 255 4 6 19 3 3 4 5 7 9 11 13 14 16 18 20 21 25 28 31 34 36 37 38 LCS_GDT D 256 D 256 4 6 19 3 4 4 5 7 9 11 13 14 16 18 21 21 25 28 31 34 36 37 38 LCS_GDT I 257 I 257 4 6 19 3 3 5 5 8 11 12 13 15 17 18 22 23 25 28 31 34 36 37 38 LCS_GDT S 258 S 258 4 10 19 3 3 5 5 10 12 13 13 15 17 18 22 23 25 28 31 34 36 37 38 LCS_GDT Y 259 Y 259 6 10 19 3 4 8 9 9 12 13 13 15 17 18 22 23 25 28 31 34 36 37 38 LCS_GDT T 260 T 260 8 10 19 6 7 9 10 11 12 13 13 15 17 18 22 23 23 28 31 34 36 37 38 LCS_GDT V 261 V 261 8 10 19 6 7 9 10 11 12 13 13 15 17 18 22 26 28 29 31 31 36 37 38 LCS_GDT R 262 R 262 8 10 18 6 7 9 10 11 12 13 15 17 18 21 22 26 28 29 31 31 32 32 33 LCS_GDT L 263 L 263 8 10 18 6 7 9 10 11 12 13 16 17 19 21 22 25 26 28 31 31 32 32 33 LCS_GDT S 264 S 264 8 10 18 6 7 9 10 11 12 13 13 15 17 18 22 23 23 25 27 29 30 31 33 LCS_GDT F 265 F 265 8 10 18 6 7 9 10 11 12 13 13 15 17 18 22 23 23 24 27 29 30 31 32 LCS_GDT A 266 A 266 8 10 18 3 6 9 10 11 12 13 13 15 17 18 22 23 23 24 27 29 30 31 32 LCS_GDT E 267 E 267 8 10 18 2 7 9 10 11 12 13 13 15 17 18 22 23 23 24 27 29 30 31 32 LCS_GDT D 268 D 268 3 10 18 1 3 4 6 7 10 12 12 15 16 18 22 23 23 24 27 29 30 31 32 LCS_GDT G 269 G 269 3 4 18 0 1 3 4 4 4 6 7 14 14 15 15 17 19 21 23 24 27 28 30 LCS_GDT S 270 S 270 0 3 18 0 0 0 0 3 4 4 5 5 5 7 8 17 18 20 23 24 25 28 30 LCS_GDT H 274 H 274 3 6 8 3 3 3 4 5 6 6 6 6 6 7 7 7 8 8 8 8 11 11 11 LCS_GDT S 275 S 275 4 6 8 3 4 4 4 5 6 6 6 6 6 7 7 7 8 8 8 8 11 11 11 LCS_GDT G 276 G 276 4 6 19 3 4 4 4 5 6 6 6 6 6 7 7 7 8 16 19 23 24 26 26 LCS_GDT S 277 S 277 4 6 21 3 4 4 4 5 6 6 6 9 15 18 19 21 23 25 27 28 29 32 33 LCS_GDT Q 278 Q 278 4 15 21 3 4 4 5 8 12 15 16 17 19 20 22 25 26 28 31 31 32 32 33 LCS_GDT N 279 N 279 10 15 21 4 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT V 280 V 280 10 15 21 4 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT V 281 V 281 10 15 21 4 7 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT V 282 V 282 10 15 21 4 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT S 283 S 283 10 15 21 4 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT G 284 G 284 10 15 21 4 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT S 285 S 285 10 15 21 4 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT G 286 G 286 10 15 21 3 7 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT K 287 K 287 10 15 21 4 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 31 32 32 33 LCS_GDT F 288 F 288 10 15 21 4 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 33 36 37 38 LCS_GDT V 289 V 289 7 15 21 4 7 8 13 14 15 16 17 19 20 21 22 26 28 29 31 33 36 37 38 LCS_GDT S 290 S 290 7 15 21 4 7 8 13 14 15 16 17 19 20 21 22 26 28 29 31 34 36 37 38 LCS_GDT K 291 K 291 7 15 21 3 7 8 13 14 15 16 17 19 20 21 22 26 28 29 31 34 36 37 38 LCS_GDT G 292 G 292 4 15 21 0 3 4 11 14 15 16 17 18 20 21 22 26 28 29 31 34 36 37 38 LCS_GDT E 293 E 293 4 15 21 1 7 8 11 11 15 16 17 18 20 21 22 26 28 29 31 34 36 37 38 LCS_GDT K 294 K 294 4 5 21 3 4 4 4 5 5 5 6 12 14 14 16 19 23 25 26 29 31 32 38 LCS_GDT N 295 N 295 4 5 21 3 4 4 4 5 5 5 6 6 6 6 9 12 15 19 24 27 27 30 34 LCS_GDT S 296 S 296 4 5 21 3 4 4 10 10 12 13 15 17 18 21 21 24 28 29 31 34 36 37 38 LCS_GDT L 297 L 297 3 5 21 0 3 4 4 5 7 12 13 15 16 18 21 24 26 29 31 34 36 37 38 LCS_AVERAGE LCS_A: 8.21 ( 4.16 6.81 13.67 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 9 13 14 15 16 17 19 20 21 22 26 28 29 31 34 36 37 38 GDT PERCENT_AT 4.44 5.93 6.67 9.63 10.37 11.11 11.85 12.59 14.07 14.81 15.56 16.30 19.26 20.74 21.48 22.96 25.19 26.67 27.41 28.15 GDT RMS_LOCAL 0.41 0.64 0.80 1.42 1.57 1.77 1.95 2.13 2.85 2.86 3.03 3.29 4.43 4.64 4.78 5.04 6.22 6.46 6.57 6.72 GDT RMS_ALL_AT 15.71 19.05 19.04 18.96 19.02 19.03 19.05 19.01 18.95 19.02 19.04 18.96 18.59 18.61 18.59 18.66 19.50 19.35 19.28 19.29 # Checking swapping # possible swapping detected: D 251 D 251 # possible swapping detected: E 252 E 252 # possible swapping detected: Y 259 Y 259 # possible swapping detected: E 293 E 293 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 232 V 232 13.710 0 0.061 1.394 15.823 0.000 0.000 LGA V 233 V 233 9.541 0 0.130 1.055 11.242 0.476 2.789 LGA N 234 N 234 8.702 0 0.072 0.249 13.589 10.119 5.060 LGA I 235 I 235 3.931 0 0.134 0.157 5.839 29.405 40.476 LGA S 236 S 236 6.266 0 0.166 0.610 8.846 26.786 20.000 LGA T 237 T 237 6.897 0 0.040 1.192 10.497 7.024 7.143 LGA K 238 K 238 9.706 0 0.209 0.704 16.434 2.024 0.899 LGA S 239 S 239 6.942 0 0.261 0.677 7.344 17.738 15.159 LGA M 240 M 240 3.420 0 0.405 1.017 11.180 50.357 29.286 LGA K 241 K 241 4.825 0 0.221 0.943 9.191 29.048 17.302 LGA D 242 D 242 8.175 0 0.536 0.606 9.947 5.357 3.690 LGA N 243 N 243 8.897 0 0.590 0.956 10.589 1.905 6.012 LGA L 244 L 244 14.049 0 0.634 0.597 16.859 0.000 0.000 LGA L 245 L 245 19.637 0 0.609 1.378 22.639 0.000 0.000 LGA T 246 T 246 22.411 0 0.572 0.538 23.902 0.000 0.000 LGA L 247 L 247 22.244 0 0.703 0.673 24.784 0.000 0.000 LGA K 248 K 248 28.726 0 0.624 1.218 33.483 0.000 0.000 LGA T 249 T 249 31.932 0 0.306 0.909 32.723 0.000 0.000 LGA K 250 K 250 33.885 0 0.129 1.026 40.720 0.000 0.000 LGA D 251 D 251 34.305 0 0.446 1.053 37.758 0.000 0.000 LGA E 252 E 252 38.043 0 0.190 0.790 44.037 0.000 0.000 LGA S 253 S 253 38.966 0 0.522 0.739 40.616 0.000 0.000 LGA G 254 G 254 35.881 0 0.094 0.094 36.291 0.000 0.000 LGA K 255 K 255 33.929 0 0.282 1.089 34.742 0.000 0.000 LGA D 256 D 256 32.333 0 0.604 0.567 34.092 0.000 0.000 LGA I 257 I 257 30.933 0 0.505 0.902 36.076 0.000 0.000 LGA S 258 S 258 27.280 0 0.626 0.698 29.604 0.000 0.000 LGA Y 259 Y 259 21.428 0 0.662 1.360 23.531 0.000 0.000 LGA T 260 T 260 17.078 0 0.093 0.105 20.985 0.000 0.000 LGA V 261 V 261 10.023 0 0.042 0.873 12.488 0.714 2.245 LGA R 262 R 262 6.380 0 0.103 1.725 10.883 31.190 13.636 LGA L 263 L 263 5.888 0 0.078 0.934 9.318 12.857 17.798 LGA S 264 S 264 11.265 0 0.133 0.164 13.711 0.714 0.476 LGA F 265 F 265 16.909 0 0.018 1.156 20.291 0.000 0.000 LGA A 266 A 266 24.137 0 0.047 0.102 26.099 0.000 0.000 LGA E 267 E 267 30.753 4 0.603 0.616 32.574 0.000 0.000 LGA D 268 D 268 35.269 0 0.546 1.468 36.536 0.000 0.000 LGA G 269 G 269 33.756 0 0.658 0.658 34.104 0.000 0.000 LGA S 270 S 270 32.668 0 0.650 0.895 34.070 0.000 0.000 LGA H 274 H 274 22.705 0 0.537 1.359 26.361 0.000 0.000 LGA S 275 S 275 20.184 0 0.234 0.358 20.984 0.000 0.000 LGA G 276 G 276 17.020 0 0.589 0.589 18.210 0.000 0.000 LGA S 277 S 277 9.796 0 0.075 0.125 12.511 1.667 2.381 LGA Q 278 Q 278 6.444 0 0.664 1.123 14.063 20.833 10.053 LGA N 279 N 279 1.924 0 0.713 1.086 5.154 75.476 59.940 LGA V 280 V 280 1.259 0 0.099 0.956 3.477 72.976 69.660 LGA V 281 V 281 1.954 0 0.092 0.541 3.820 77.262 70.000 LGA V 282 V 282 1.700 0 0.088 0.297 2.295 70.833 69.388 LGA S 283 S 283 0.570 0 0.180 0.544 1.769 90.595 87.619 LGA G 284 G 284 0.558 0 0.065 0.065 0.900 95.238 95.238 LGA S 285 S 285 0.818 0 0.123 0.552 2.016 88.333 84.762 LGA G 286 G 286 2.500 0 0.139 0.139 2.500 71.071 71.071 LGA K 287 K 287 1.412 0 0.124 0.698 2.213 70.952 77.037 LGA F 288 F 288 2.030 0 0.074 0.239 3.704 77.381 61.948 LGA V 289 V 289 1.781 0 0.135 1.275 5.608 65.119 55.578 LGA S 290 S 290 1.510 0 0.627 0.823 3.704 67.619 69.683 LGA K 291 K 291 1.644 0 0.569 1.310 8.277 65.595 47.937 LGA G 292 G 292 2.163 0 0.690 0.690 4.838 56.548 56.548 LGA E 293 E 293 3.420 0 0.609 1.190 6.741 35.476 46.720 LGA K 294 K 294 10.182 0 0.634 1.016 14.045 2.500 1.111 LGA N 295 N 295 11.970 2 0.411 0.394 14.738 0.000 0.000 LGA S 296 S 296 6.738 0 0.421 0.677 8.668 7.738 21.905 LGA L 297 L 297 8.175 0 0.612 0.601 11.107 3.690 3.214 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 63 252 252 100.00 463 463 100.00 135 SUMMARY(RMSD_GDC): 13.912 13.890 14.179 9.945 9.213 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 63 135 4.0 17 2.13 12.778 11.257 0.761 LGA_LOCAL RMSD: 2.133 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.007 Number of assigned atoms: 63 Std_ASGN_ATOMS RMSD: 13.912 Standard rmsd on all 63 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.093376 * X + 0.908402 * Y + 0.407537 * Z + 36.445473 Y_new = -0.401362 * X + 0.408937 * Y + -0.819560 * Z + 29.020456 Z_new = -0.911147 * X + -0.087042 * Y + 0.402783 * Z + -13.054230 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.342214 1.146060 -0.212829 [DEG: -76.9032 65.6644 -12.1942 ] ZXZ: 0.461456 1.156241 -1.666038 [DEG: 26.4395 66.2477 -95.4569 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0571TS218_1_2-D2 REMARK 2: T0571-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0571TS218_1_2-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 63 135 4.0 17 2.13 11.257 13.91 REMARK ---------------------------------------------------------- MOLECULE T0571TS218_1_2-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 2 REMARK PFRMAT TS REMARK TARGET T0571 REMARK PARENT N/A ATOM 153 N VAL 232 15.579 40.525 4.498 1.00 0.00 N ATOM 154 CA VAL 232 16.622 40.388 5.468 1.00 0.00 C ATOM 155 C VAL 232 17.804 39.937 4.654 1.00 0.00 C ATOM 156 O VAL 232 17.712 38.957 3.917 1.00 0.00 O ATOM 157 CB VAL 232 16.257 39.476 6.647 1.00 0.00 C ATOM 158 CG1 VAL 232 14.904 38.752 6.468 1.00 0.00 C ATOM 159 CG2 VAL 232 17.387 38.526 7.071 1.00 0.00 C ATOM 160 N VAL 233 18.960 40.606 4.822 1.00 0.00 N ATOM 161 CA VAL 233 20.147 40.273 4.075 1.00 0.00 C ATOM 162 C VAL 233 20.979 39.693 5.169 1.00 0.00 C ATOM 163 O VAL 233 21.221 40.368 6.170 1.00 0.00 O ATOM 164 CB VAL 233 20.880 41.448 3.461 1.00 0.00 C ATOM 165 CG1 VAL 233 22.108 40.951 2.663 1.00 0.00 C ATOM 166 CG2 VAL 233 19.906 42.232 2.561 1.00 0.00 C ATOM 167 N ASN 234 21.377 38.415 5.020 1.00 0.00 N ATOM 168 CA ASN 234 22.171 37.706 5.981 1.00 0.00 C ATOM 169 C ASN 234 23.573 37.526 5.482 1.00 0.00 C ATOM 170 O ASN 234 23.782 37.239 4.304 1.00 0.00 O ATOM 171 CB ASN 234 21.597 36.310 6.128 1.00 0.00 C ATOM 172 CG ASN 234 20.276 36.416 6.876 1.00 0.00 C ATOM 173 OD1 ASN 234 20.213 36.753 8.058 1.00 0.00 O ATOM 174 ND2 ASN 234 19.176 36.130 6.138 1.00 0.00 N ATOM 175 N ILE 235 24.573 37.690 6.385 1.00 0.00 N ATOM 176 CA ILE 235 25.971 37.705 6.036 1.00 0.00 C ATOM 177 C ILE 235 26.647 36.796 7.040 1.00 0.00 C ATOM 178 O ILE 235 26.301 36.785 8.219 1.00 0.00 O ATOM 179 CB ILE 235 26.573 39.095 6.145 1.00 0.00 C ATOM 180 CG1 ILE 235 25.792 40.111 5.281 1.00 0.00 C ATOM 181 CG2 ILE 235 28.093 39.134 5.839 1.00 0.00 C ATOM 182 CD1 ILE 235 26.401 41.512 5.289 1.00 0.00 C ATOM 183 N SER 236 27.691 36.072 6.599 1.00 0.00 N ATOM 184 CA SER 236 28.231 34.990 7.363 1.00 0.00 C ATOM 185 C SER 236 29.348 35.713 8.031 1.00 0.00 C ATOM 186 O SER 236 30.142 36.361 7.348 1.00 0.00 O ATOM 187 CB SER 236 28.846 33.861 6.512 1.00 0.00 C ATOM 188 OG SER 236 29.534 32.928 7.337 1.00 0.00 O ATOM 189 N THR 237 29.405 35.659 9.370 1.00 0.00 N ATOM 190 CA THR 237 30.353 36.405 10.123 1.00 0.00 C ATOM 191 C THR 237 31.460 35.495 10.586 1.00 0.00 C ATOM 192 O THR 237 31.244 34.431 11.171 1.00 0.00 O ATOM 193 CB THR 237 29.667 37.082 11.266 1.00 0.00 C ATOM 194 OG1 THR 237 30.601 37.754 12.104 1.00 0.00 O ATOM 195 CG2 THR 237 28.849 36.024 12.040 1.00 0.00 C ATOM 196 N LYS 238 32.696 35.957 10.346 1.00 0.00 N ATOM 197 CA LYS 238 33.861 35.193 10.669 1.00 0.00 C ATOM 198 C LYS 238 34.467 36.013 11.753 1.00 0.00 C ATOM 199 O LYS 238 34.501 35.581 12.901 1.00 0.00 O ATOM 200 CB LYS 238 34.871 34.993 9.518 1.00 0.00 C ATOM 201 CG LYS 238 36.136 34.224 9.935 1.00 0.00 C ATOM 202 CD LYS 238 37.081 33.946 8.763 1.00 0.00 C ATOM 203 CE LYS 238 38.383 33.241 9.176 1.00 0.00 C ATOM 204 NZ LYS 238 39.125 32.746 7.990 1.00 0.00 N ATOM 205 N SER 239 34.984 37.208 11.392 1.00 0.00 N ATOM 206 CA SER 239 35.528 38.128 12.341 1.00 0.00 C ATOM 207 C SER 239 34.441 39.082 12.744 1.00 0.00 C ATOM 208 O SER 239 33.514 38.675 13.442 1.00 0.00 O ATOM 209 CB SER 239 36.778 38.828 11.755 1.00 0.00 C ATOM 210 OG SER 239 37.381 39.723 12.679 1.00 0.00 O ATOM 211 N MET 240 34.581 40.377 12.352 1.00 0.00 N ATOM 212 CA MET 240 33.583 41.395 12.439 1.00 0.00 C ATOM 213 C MET 240 33.418 41.655 13.900 1.00 0.00 C ATOM 214 O MET 240 32.307 41.743 14.388 1.00 0.00 O ATOM 215 CB MET 240 32.225 41.077 11.777 1.00 0.00 C ATOM 216 CG MET 240 32.310 41.032 10.252 1.00 0.00 C ATOM 217 SD MET 240 30.681 40.922 9.460 1.00 0.00 S ATOM 218 CE MET 240 31.295 40.666 7.770 1.00 0.00 C ATOM 219 N LYS 241 34.519 41.820 14.647 1.00 0.00 N ATOM 220 CA LYS 241 34.414 41.787 16.077 1.00 0.00 C ATOM 221 C LYS 241 34.083 43.191 16.468 1.00 0.00 C ATOM 222 O LYS 241 33.080 43.421 17.136 1.00 0.00 O ATOM 223 CB LYS 241 35.699 41.279 16.762 1.00 0.00 C ATOM 224 CG LYS 241 35.853 41.633 18.246 1.00 0.00 C ATOM 225 CD LYS 241 36.978 40.849 18.924 1.00 0.00 C ATOM 226 CE LYS 241 37.187 41.281 20.382 1.00 0.00 C ATOM 227 NZ LYS 241 38.226 40.470 21.062 1.00 0.00 N ATOM 228 N ASP 242 34.943 44.149 16.078 1.00 0.00 N ATOM 229 CA ASP 242 34.678 45.560 16.074 1.00 0.00 C ATOM 230 C ASP 242 33.329 45.936 15.571 1.00 0.00 C ATOM 231 O ASP 242 32.600 46.623 16.279 1.00 0.00 O ATOM 232 CB ASP 242 35.767 46.325 15.301 1.00 0.00 C ATOM 233 CG ASP 242 37.055 46.315 16.136 1.00 0.00 C ATOM 234 OD1 ASP 242 37.080 45.676 17.227 1.00 0.00 O ATOM 235 OD2 ASP 242 38.054 46.913 15.661 1.00 0.00 O ATOM 236 N ASN 243 32.969 45.537 14.333 1.00 0.00 N ATOM 237 CA ASN 243 31.627 45.685 13.824 1.00 0.00 C ATOM 238 C ASN 243 30.536 45.259 14.741 1.00 0.00 C ATOM 239 O ASN 243 29.567 45.996 14.871 1.00 0.00 O ATOM 240 CB ASN 243 31.364 45.013 12.462 1.00 0.00 C ATOM 241 CG ASN 243 32.331 45.608 11.433 1.00 0.00 C ATOM 242 OD1 ASN 243 32.836 46.719 11.588 1.00 0.00 O ATOM 243 ND2 ASN 243 32.617 44.840 10.346 1.00 0.00 N ATOM 244 N LEU 244 30.638 44.093 15.405 1.00 0.00 N ATOM 245 CA LEU 244 29.547 43.625 16.221 1.00 0.00 C ATOM 246 C LEU 244 29.459 44.482 17.437 1.00 0.00 C ATOM 247 O LEU 244 28.382 44.625 18.010 1.00 0.00 O ATOM 248 CB LEU 244 29.713 42.188 16.756 1.00 0.00 C ATOM 249 CG LEU 244 29.657 41.123 15.649 1.00 0.00 C ATOM 250 CD1 LEU 244 30.290 39.776 16.059 1.00 0.00 C ATOM 251 CD2 LEU 244 28.279 40.927 15.077 1.00 0.00 C ATOM 252 N LEU 245 30.594 45.068 17.845 1.00 0.00 N ATOM 253 CA LEU 245 30.676 45.801 19.068 1.00 0.00 C ATOM 254 C LEU 245 30.033 47.125 18.820 1.00 0.00 C ATOM 255 O LEU 245 29.268 47.587 19.659 1.00 0.00 O ATOM 256 CB LEU 245 32.105 46.067 19.573 1.00 0.00 C ATOM 257 CG LEU 245 32.824 44.861 20.214 1.00 0.00 C ATOM 258 CD1 LEU 245 34.333 45.153 20.336 1.00 0.00 C ATOM 259 CD2 LEU 245 32.209 44.463 21.571 1.00 0.00 C ATOM 260 N THR 246 30.342 47.784 17.685 1.00 0.00 N ATOM 261 CA THR 246 29.604 48.911 17.214 1.00 0.00 C ATOM 262 C THR 246 28.142 48.631 17.129 1.00 0.00 C ATOM 263 O THR 246 27.390 49.400 17.717 1.00 0.00 O ATOM 264 CB THR 246 30.172 49.419 15.930 1.00 0.00 C ATOM 265 OG1 THR 246 31.543 49.709 16.163 1.00 0.00 O ATOM 266 CG2 THR 246 29.420 50.682 15.458 1.00 0.00 C ATOM 267 N LEU 247 27.700 47.544 16.447 1.00 0.00 N ATOM 268 CA LEU 247 26.300 47.218 16.313 1.00 0.00 C ATOM 269 C LEU 247 25.585 46.971 17.609 1.00 0.00 C ATOM 270 O LEU 247 24.364 46.881 17.609 1.00 0.00 O ATOM 271 CB LEU 247 25.951 45.993 15.453 1.00 0.00 C ATOM 272 CG LEU 247 26.389 46.110 13.982 1.00 0.00 C ATOM 273 CD1 LEU 247 26.374 44.747 13.271 1.00 0.00 C ATOM 274 CD2 LEU 247 25.574 47.162 13.207 1.00 0.00 C ATOM 275 N LYS 248 26.297 46.891 18.739 1.00 0.00 N ATOM 276 CA LYS 248 25.711 46.695 20.027 1.00 0.00 C ATOM 277 C LYS 248 25.271 48.030 20.616 1.00 0.00 C ATOM 278 O LYS 248 24.263 48.057 21.324 1.00 0.00 O ATOM 279 CB LYS 248 26.737 46.019 20.951 1.00 0.00 C ATOM 280 CG LYS 248 26.656 44.493 21.027 1.00 0.00 C ATOM 281 CD LYS 248 28.004 43.872 21.410 1.00 0.00 C ATOM 282 CE LYS 248 27.932 42.365 21.646 1.00 0.00 C ATOM 283 NZ LYS 248 29.212 41.843 22.185 1.00 0.00 N ATOM 284 N THR 249 25.984 49.158 20.346 1.00 0.00 N ATOM 285 CA THR 249 25.756 50.442 20.991 1.00 0.00 C ATOM 286 C THR 249 24.774 51.203 20.217 1.00 0.00 C ATOM 287 O THR 249 25.167 51.961 19.325 1.00 0.00 O ATOM 288 CB THR 249 26.960 51.347 20.954 1.00 0.00 C ATOM 289 OG1 THR 249 27.970 50.712 21.703 1.00 0.00 O ATOM 290 CG2 THR 249 26.699 52.783 21.535 1.00 0.00 C ATOM 291 N LYS 250 23.488 50.965 20.520 1.00 0.00 N ATOM 292 CA LYS 250 22.384 51.639 19.946 1.00 0.00 C ATOM 293 C LYS 250 22.878 53.178 19.751 1.00 0.00 C ATOM 294 O LYS 250 23.287 53.500 20.857 1.00 0.00 O ATOM 295 CB LYS 250 21.192 51.049 20.818 1.00 0.00 C ATOM 296 CG LYS 250 20.885 51.478 22.232 1.00 0.00 C ATOM 297 CD LYS 250 19.399 51.264 22.587 1.00 0.00 C ATOM 298 CE LYS 250 19.012 52.135 23.790 1.00 0.00 C ATOM 299 NZ LYS 250 17.636 51.863 24.243 1.00 0.00 N ATOM 300 N ASP 251 22.959 54.173 18.605 1.00 0.00 N ATOM 301 CA ASP 251 22.312 55.569 18.011 1.00 0.00 C ATOM 302 C ASP 251 21.374 56.748 18.668 1.00 0.00 C ATOM 303 O ASP 251 21.919 57.622 19.326 1.00 0.00 O ATOM 304 CB ASP 251 21.964 55.774 16.468 1.00 0.00 C ATOM 305 CG ASP 251 21.784 57.256 16.157 1.00 0.00 C ATOM 306 OD1 ASP 251 22.864 57.879 16.069 1.00 0.00 O ATOM 307 OD2 ASP 251 20.647 57.780 15.966 1.00 0.00 O ATOM 308 N GLU 252 19.978 56.853 18.591 1.00 0.00 N ATOM 309 CA GLU 252 19.032 57.309 19.680 1.00 0.00 C ATOM 310 C GLU 252 17.834 57.940 19.120 1.00 0.00 C ATOM 311 O GLU 252 17.071 58.626 19.804 1.00 0.00 O ATOM 312 CB GLU 252 19.502 58.003 21.021 1.00 0.00 C ATOM 313 CG GLU 252 18.681 57.819 22.342 1.00 0.00 C ATOM 314 CD GLU 252 19.549 58.375 23.476 1.00 0.00 C ATOM 315 OE1 GLU 252 20.797 58.254 23.373 1.00 0.00 O ATOM 316 OE2 GLU 252 18.993 58.921 24.467 1.00 0.00 O ATOM 317 N SER 253 17.643 57.674 17.832 1.00 0.00 N ATOM 318 CA SER 253 16.944 58.600 17.058 1.00 0.00 C ATOM 319 C SER 253 15.632 57.914 16.904 1.00 0.00 C ATOM 320 O SER 253 14.807 57.922 17.816 1.00 0.00 O ATOM 321 CB SER 253 17.736 58.897 15.762 1.00 0.00 C ATOM 322 OG SER 253 18.088 57.728 15.019 1.00 0.00 O ATOM 323 N GLY 254 15.429 57.273 15.750 1.00 0.00 N ATOM 324 CA GLY 254 14.159 56.756 15.394 1.00 0.00 C ATOM 325 C GLY 254 14.272 55.276 15.357 1.00 0.00 C ATOM 326 O GLY 254 13.252 54.608 15.500 1.00 0.00 O ATOM 327 N LYS 255 15.493 54.732 15.162 1.00 0.00 N ATOM 328 CA LYS 255 15.609 53.316 14.934 1.00 0.00 C ATOM 329 C LYS 255 16.249 52.824 16.188 1.00 0.00 C ATOM 330 O LYS 255 15.967 53.300 17.288 1.00 0.00 O ATOM 331 CB LYS 255 16.486 52.861 13.739 1.00 0.00 C ATOM 332 CG LYS 255 16.094 53.440 12.390 1.00 0.00 C ATOM 333 CD LYS 255 16.793 52.723 11.231 1.00 0.00 C ATOM 334 CE LYS 255 16.451 53.354 9.876 1.00 0.00 C ATOM 335 NZ LYS 255 17.201 52.721 8.761 1.00 0.00 N ATOM 336 N ASP 256 17.211 51.914 16.037 1.00 0.00 N ATOM 337 CA ASP 256 17.427 50.983 17.086 1.00 0.00 C ATOM 338 C ASP 256 18.671 51.465 17.654 1.00 0.00 C ATOM 339 O ASP 256 18.908 51.100 18.780 1.00 0.00 O ATOM 340 CB ASP 256 17.820 49.548 16.785 1.00 0.00 C ATOM 341 CG ASP 256 16.653 48.628 16.873 1.00 0.00 C ATOM 342 OD1 ASP 256 15.755 48.797 17.738 1.00 0.00 O ATOM 343 OD2 ASP 256 16.669 47.703 16.019 1.00 0.00 O ATOM 344 N ILE 257 19.510 52.265 16.965 1.00 0.00 N ATOM 345 CA ILE 257 20.342 53.284 17.540 1.00 0.00 C ATOM 346 C ILE 257 21.551 52.603 16.627 1.00 0.00 C ATOM 347 O ILE 257 21.680 52.912 15.442 1.00 0.00 O ATOM 348 CB ILE 257 20.042 53.786 19.180 1.00 0.00 C ATOM 349 CG1 ILE 257 18.571 54.018 19.494 1.00 0.00 C ATOM 350 CG2 ILE 257 20.743 54.681 20.448 1.00 0.00 C ATOM 351 CD1 ILE 257 18.306 54.133 21.001 1.00 0.00 C ATOM 352 N SER 258 22.374 51.584 17.018 1.00 0.00 N ATOM 353 CA SER 258 23.763 51.256 16.639 1.00 0.00 C ATOM 354 C SER 258 23.739 50.338 15.531 1.00 0.00 C ATOM 355 O SER 258 24.677 50.186 14.742 1.00 0.00 O ATOM 356 CB SER 258 24.437 50.087 17.393 1.00 0.00 C ATOM 357 OG SER 258 23.578 49.393 18.271 1.00 0.00 O ATOM 358 N TYR 259 22.612 49.634 15.592 1.00 0.00 N ATOM 359 CA TYR 259 22.037 48.732 14.724 1.00 0.00 C ATOM 360 C TYR 259 22.021 49.408 13.360 1.00 0.00 C ATOM 361 O TYR 259 21.944 48.716 12.362 1.00 0.00 O ATOM 362 CB TYR 259 20.666 48.397 15.361 1.00 0.00 C ATOM 363 CG TYR 259 20.767 47.517 16.612 1.00 0.00 C ATOM 364 CD1 TYR 259 21.263 47.935 17.815 1.00 0.00 C ATOM 365 CD2 TYR 259 20.044 46.355 16.736 1.00 0.00 C ATOM 366 CE1 TYR 259 21.662 47.024 18.751 1.00 0.00 C ATOM 367 CE2 TYR 259 20.141 45.533 17.846 1.00 0.00 C ATOM 368 CZ TYR 259 21.160 45.753 18.758 1.00 0.00 C ATOM 369 OH TYR 259 21.354 44.923 19.890 1.00 0.00 H ATOM 370 N THR 260 22.220 50.733 13.217 1.00 0.00 N ATOM 371 CA THR 260 21.960 51.382 11.969 1.00 0.00 C ATOM 372 C THR 260 23.238 51.133 11.210 1.00 0.00 C ATOM 373 O THR 260 24.319 51.451 11.709 1.00 0.00 O ATOM 374 CB THR 260 21.695 52.869 12.107 1.00 0.00 C ATOM 375 OG1 THR 260 20.404 53.079 12.668 1.00 0.00 O ATOM 376 CG2 THR 260 21.759 53.543 10.717 1.00 0.00 C ATOM 377 N VAL 261 23.139 50.523 10.004 1.00 0.00 N ATOM 378 CA VAL 261 24.287 50.184 9.215 1.00 0.00 C ATOM 379 C VAL 261 23.952 50.537 7.793 1.00 0.00 C ATOM 380 O VAL 261 22.776 50.599 7.432 1.00 0.00 O ATOM 381 CB VAL 261 24.665 48.726 9.389 1.00 0.00 C ATOM 382 CG1 VAL 261 23.494 47.789 9.010 1.00 0.00 C ATOM 383 CG2 VAL 261 25.981 48.388 8.659 1.00 0.00 C ATOM 384 N ARG 262 24.990 50.807 6.966 1.00 0.00 N ATOM 385 CA ARG 262 24.842 50.923 5.540 1.00 0.00 C ATOM 386 C ARG 262 25.659 49.837 4.896 1.00 0.00 C ATOM 387 O ARG 262 26.723 49.483 5.401 1.00 0.00 O ATOM 388 CB ARG 262 25.358 52.266 4.997 1.00 0.00 C ATOM 389 CG ARG 262 24.669 53.483 5.624 1.00 0.00 C ATOM 390 CD ARG 262 25.379 54.807 5.332 1.00 0.00 C ATOM 391 NE ARG 262 24.618 55.892 6.022 1.00 0.00 N ATOM 392 CZ ARG 262 23.678 56.670 5.374 1.00 0.00 C ATOM 393 NH1 ARG 262 23.187 57.767 6.079 1.00 0.00 H ATOM 394 NH2 ARG 262 23.075 56.260 4.218 1.00 0.00 H ATOM 395 N LEU 263 25.191 49.293 3.751 1.00 0.00 N ATOM 396 CA LEU 263 26.065 48.559 2.872 1.00 0.00 C ATOM 397 C LEU 263 25.904 48.858 1.406 1.00 0.00 C ATOM 398 O LEU 263 24.832 49.257 0.961 1.00 0.00 O ATOM 399 CB LEU 263 25.191 47.259 2.708 1.00 0.00 C ATOM 400 CG LEU 263 25.943 45.897 2.749 1.00 0.00 C ATOM 401 CD1 LEU 263 25.039 44.712 3.136 1.00 0.00 C ATOM 402 CD2 LEU 263 26.570 45.547 1.392 1.00 0.00 C ATOM 403 N SER 264 27.025 48.807 0.652 1.00 0.00 N ATOM 404 CA SER 264 27.019 48.956 -0.768 1.00 0.00 C ATOM 405 C SER 264 27.580 47.690 -1.364 1.00 0.00 C ATOM 406 O SER 264 28.543 47.149 -0.815 1.00 0.00 O ATOM 407 CB SER 264 27.886 50.183 -1.111 1.00 0.00 C ATOM 408 OG SER 264 28.018 50.361 -2.503 1.00 0.00 O ATOM 409 N PHE 265 26.972 47.176 -2.481 1.00 0.00 N ATOM 410 CA PHE 265 27.626 46.242 -3.375 1.00 0.00 C ATOM 411 C PHE 265 27.254 46.278 -4.836 1.00 0.00 C ATOM 412 O PHE 265 26.101 46.568 -5.163 1.00 0.00 O ATOM 413 CB PHE 265 27.005 44.867 -3.148 1.00 0.00 C ATOM 414 CG PHE 265 27.946 43.742 -3.007 1.00 0.00 C ATOM 415 CD1 PHE 265 27.380 42.493 -2.878 1.00 0.00 C ATOM 416 CD2 PHE 265 29.283 43.829 -3.322 1.00 0.00 C ATOM 417 CE1 PHE 265 28.163 41.386 -3.075 1.00 0.00 C ATOM 418 CE2 PHE 265 30.012 42.727 -3.639 1.00 0.00 C ATOM 419 CZ PHE 265 29.470 41.483 -3.483 1.00 0.00 C ATOM 420 N ALA 266 28.185 45.913 -5.756 1.00 0.00 N ATOM 421 CA ALA 266 27.924 46.140 -7.145 1.00 0.00 C ATOM 422 C ALA 266 28.587 45.173 -8.072 1.00 0.00 C ATOM 423 O ALA 266 29.400 44.355 -7.643 1.00 0.00 O ATOM 424 CB ALA 266 28.653 47.418 -7.495 1.00 0.00 C ATOM 425 N GLU 267 28.271 45.313 -9.389 1.00 0.00 N ATOM 426 CA GLU 267 28.954 44.688 -10.487 1.00 0.00 C ATOM 427 C GLU 267 28.455 45.447 -11.703 1.00 0.00 C ATOM 428 O GLU 267 27.481 46.176 -11.628 1.00 0.00 O ATOM 429 CB GLU 267 28.406 43.272 -10.644 1.00 0.00 C ATOM 430 CG GLU 267 29.197 42.331 -11.530 1.00 0.00 C ATOM 431 CD GLU 267 28.433 41.024 -11.545 1.00 0.00 C ATOM 432 OE1 GLU 267 28.957 40.080 -12.189 1.00 0.00 O ATOM 433 OE2 GLU 267 27.338 40.935 -10.923 1.00 0.00 O ATOM 434 N ASP 268 29.010 45.319 -12.904 1.00 0.00 N ATOM 435 CA ASP 268 28.802 46.348 -13.904 1.00 0.00 C ATOM 436 C ASP 268 27.083 46.506 -14.761 1.00 0.00 C ATOM 437 O ASP 268 27.132 45.583 -15.572 1.00 0.00 O ATOM 438 CB ASP 268 30.457 46.156 -14.542 1.00 0.00 C ATOM 439 CG ASP 268 31.856 45.317 -13.831 1.00 0.00 C ATOM 440 OD1 ASP 268 33.079 45.643 -14.069 1.00 0.00 O ATOM 441 OD2 ASP 268 31.733 44.304 -13.075 1.00 0.00 O ATOM 442 N GLY 269 25.578 47.338 -14.801 1.00 0.00 N ATOM 443 CA GLY 269 24.489 48.827 -15.015 1.00 0.00 C ATOM 444 C GLY 269 22.731 49.686 -15.232 1.00 0.00 C ATOM 445 O GLY 269 21.700 49.016 -15.348 1.00 0.00 O ATOM 446 N SER 270 22.235 51.174 -15.299 1.00 0.00 N ATOM 447 CA SER 270 20.793 52.022 -15.527 1.00 0.00 C ATOM 448 C SER 270 20.735 53.244 -16.516 1.00 0.00 C ATOM 449 O SER 270 19.873 53.647 -17.333 1.00 0.00 O ATOM 450 CB SER 270 20.020 53.002 -14.419 1.00 0.00 C ATOM 451 OG SER 270 19.086 54.035 -14.887 1.00 0.00 O ATOM 452 N HIS 274 23.437 53.116 -17.058 1.00 0.00 N ATOM 453 CA HIS 274 23.146 53.963 -18.151 1.00 0.00 C ATOM 454 C HIS 274 24.004 53.323 -19.162 1.00 0.00 C ATOM 455 O HIS 274 24.642 54.032 -19.931 1.00 0.00 O ATOM 456 CB HIS 274 23.500 55.385 -17.689 1.00 0.00 C ATOM 457 CG HIS 274 24.963 55.551 -17.397 1.00 0.00 C ATOM 458 ND1 HIS 274 25.496 56.811 -17.532 1.00 0.00 N ATOM 459 CD2 HIS 274 25.959 54.617 -17.353 1.00 0.00 C ATOM 460 CE1 HIS 274 26.779 56.596 -17.730 1.00 0.00 C ATOM 461 NE2 HIS 274 27.129 55.286 -17.621 1.00 0.00 N ATOM 462 N SER 275 24.073 51.956 -19.063 1.00 0.00 N ATOM 463 CA SER 275 25.004 51.084 -19.693 1.00 0.00 C ATOM 464 C SER 275 25.223 50.071 -18.602 1.00 0.00 C ATOM 465 O SER 275 24.448 50.033 -17.657 1.00 0.00 O ATOM 466 CB SER 275 26.404 51.686 -19.955 1.00 0.00 C ATOM 467 OG SER 275 27.160 50.880 -20.844 1.00 0.00 O ATOM 468 N GLY 276 26.343 49.324 -18.696 1.00 0.00 N ATOM 469 CA GLY 276 26.858 48.398 -17.738 1.00 0.00 C ATOM 470 C GLY 276 27.628 49.338 -16.847 1.00 0.00 C ATOM 471 O GLY 276 28.320 50.215 -17.346 1.00 0.00 O ATOM 472 N SER 277 27.388 49.225 -15.531 1.00 0.00 N ATOM 473 CA SER 277 27.972 49.475 -14.244 1.00 0.00 C ATOM 474 C SER 277 26.838 49.812 -13.294 1.00 0.00 C ATOM 475 O SER 277 26.187 50.801 -13.596 1.00 0.00 O ATOM 476 CB SER 277 29.323 50.142 -14.225 1.00 0.00 C ATOM 477 OG SER 277 29.755 50.249 -12.885 1.00 0.00 O ATOM 478 N GLN 278 26.448 48.936 -12.267 1.00 0.00 N ATOM 479 CA GLN 278 25.374 49.211 -11.281 1.00 0.00 C ATOM 480 C GLN 278 25.748 48.773 -9.889 1.00 0.00 C ATOM 481 O GLN 278 26.661 47.977 -9.728 1.00 0.00 O ATOM 482 CB GLN 278 23.938 48.549 -11.442 1.00 0.00 C ATOM 483 CG GLN 278 23.808 47.221 -12.194 1.00 0.00 C ATOM 484 CD GLN 278 22.507 47.135 -13.032 1.00 0.00 C ATOM 485 OE1 GLN 278 22.436 46.702 -14.186 1.00 0.00 O ATOM 486 NE2 GLN 278 21.401 47.582 -12.386 1.00 0.00 N ATOM 487 N ASN 279 24.973 49.232 -8.859 1.00 0.00 N ATOM 488 CA ASN 279 25.300 49.243 -7.435 1.00 0.00 C ATOM 489 C ASN 279 24.064 49.806 -6.748 1.00 0.00 C ATOM 490 O ASN 279 23.225 50.434 -7.392 1.00 0.00 O ATOM 491 CB ASN 279 26.461 50.178 -6.970 1.00 0.00 C ATOM 492 CG ASN 279 27.219 49.748 -5.670 1.00 0.00 C ATOM 493 OD1 ASN 279 28.423 49.920 -5.516 1.00 0.00 O ATOM 494 ND2 ASN 279 26.552 49.193 -4.648 1.00 0.00 N ATOM 495 N VAL 280 23.976 49.665 -5.403 1.00 0.00 N ATOM 496 CA VAL 280 22.851 49.888 -4.536 1.00 0.00 C ATOM 497 C VAL 280 23.457 50.344 -3.203 1.00 0.00 C ATOM 498 O VAL 280 24.564 49.954 -2.838 1.00 0.00 O ATOM 499 CB VAL 280 21.867 48.734 -4.332 1.00 0.00 C ATOM 500 CG1 VAL 280 21.665 47.931 -5.632 1.00 0.00 C ATOM 501 CG2 VAL 280 22.244 47.766 -3.192 1.00 0.00 C ATOM 502 N VAL 281 22.709 51.129 -2.406 1.00 0.00 N ATOM 503 CA VAL 281 23.158 51.631 -1.122 1.00 0.00 C ATOM 504 C VAL 281 22.002 51.073 -0.376 1.00 0.00 C ATOM 505 O VAL 281 20.867 51.335 -0.765 1.00 0.00 O ATOM 506 CB VAL 281 23.291 53.162 -1.020 1.00 0.00 C ATOM 507 CG1 VAL 281 22.402 53.892 0.039 1.00 0.00 C ATOM 508 CG2 VAL 281 24.779 53.529 -0.802 1.00 0.00 C ATOM 509 N VAL 282 22.263 50.233 0.643 1.00 0.00 N ATOM 510 CA VAL 282 21.246 49.602 1.425 1.00 0.00 C ATOM 511 C VAL 282 21.391 50.220 2.785 1.00 0.00 C ATOM 512 O VAL 282 22.506 50.498 3.226 1.00 0.00 O ATOM 513 CB VAL 282 21.453 48.109 1.571 1.00 0.00 C ATOM 514 CG1 VAL 282 20.146 47.433 2.031 1.00 0.00 C ATOM 515 CG2 VAL 282 21.940 47.465 0.253 1.00 0.00 C ATOM 516 N SER 283 20.266 50.423 3.487 1.00 0.00 N ATOM 517 CA SER 283 20.264 51.049 4.775 1.00 0.00 C ATOM 518 C SER 283 19.371 50.117 5.519 1.00 0.00 C ATOM 519 O SER 283 18.248 49.896 5.074 1.00 0.00 O ATOM 520 CB SER 283 19.654 52.471 4.753 1.00 0.00 C ATOM 521 OG SER 283 19.573 53.046 6.054 1.00 0.00 O ATOM 522 N GLY 284 19.835 49.527 6.648 1.00 0.00 N ATOM 523 CA GLY 284 18.918 48.826 7.498 1.00 0.00 C ATOM 524 C GLY 284 19.425 48.791 8.907 1.00 0.00 C ATOM 525 O GLY 284 20.310 49.567 9.272 1.00 0.00 O ATOM 526 N SER 285 18.837 47.874 9.708 1.00 0.00 N ATOM 527 CA SER 285 19.100 47.719 11.108 1.00 0.00 C ATOM 528 C SER 285 19.764 46.377 11.185 1.00 0.00 C ATOM 529 O SER 285 19.293 45.434 10.549 1.00 0.00 O ATOM 530 CB SER 285 17.832 47.636 11.985 1.00 0.00 C ATOM 531 OG SER 285 18.173 47.731 13.357 1.00 0.00 O ATOM 532 N GLY 286 20.875 46.280 11.947 1.00 0.00 N ATOM 533 CA GLY 286 21.689 45.113 12.102 1.00 0.00 C ATOM 534 C GLY 286 21.473 44.396 13.411 1.00 0.00 C ATOM 535 O GLY 286 21.064 44.965 14.418 1.00 0.00 O ATOM 536 N LYS 287 21.830 43.100 13.442 1.00 0.00 N ATOM 537 CA LYS 287 21.568 42.260 14.580 1.00 0.00 C ATOM 538 C LYS 287 22.370 41.043 14.277 1.00 0.00 C ATOM 539 O LYS 287 22.268 40.497 13.182 1.00 0.00 O ATOM 540 CB LYS 287 20.085 41.898 14.867 1.00 0.00 C ATOM 541 CG LYS 287 19.906 40.939 16.057 1.00 0.00 C ATOM 542 CD LYS 287 18.467 40.852 16.564 1.00 0.00 C ATOM 543 CE LYS 287 18.306 39.827 17.694 1.00 0.00 C ATOM 544 NZ LYS 287 16.878 39.635 18.052 1.00 0.00 N ATOM 545 N PHE 288 23.246 40.644 15.223 1.00 0.00 N ATOM 546 CA PHE 288 23.951 39.401 15.170 1.00 0.00 C ATOM 547 C PHE 288 23.285 38.282 15.884 1.00 0.00 C ATOM 548 O PHE 288 22.775 38.447 16.994 1.00 0.00 O ATOM 549 CB PHE 288 25.256 39.555 15.908 1.00 0.00 C ATOM 550 CG PHE 288 26.073 38.316 15.818 1.00 0.00 C ATOM 551 CD1 PHE 288 26.734 38.074 14.648 1.00 0.00 C ATOM 552 CD2 PHE 288 26.613 37.753 16.964 1.00 0.00 C ATOM 553 CE1 PHE 288 27.666 37.097 14.675 1.00 0.00 C ATOM 554 CE2 PHE 288 27.545 36.741 16.908 1.00 0.00 C ATOM 555 CZ PHE 288 27.694 36.173 15.665 1.00 0.00 C ATOM 556 N VAL 289 23.333 37.098 15.250 1.00 0.00 N ATOM 557 CA VAL 289 22.576 35.974 15.655 1.00 0.00 C ATOM 558 C VAL 289 23.525 34.792 15.589 1.00 0.00 C ATOM 559 O VAL 289 24.448 34.755 14.778 1.00 0.00 O ATOM 560 CB VAL 289 21.353 35.877 14.759 1.00 0.00 C ATOM 561 CG1 VAL 289 21.628 36.356 13.321 1.00 0.00 C ATOM 562 CG2 VAL 289 20.709 34.510 14.724 1.00 0.00 C ATOM 563 N SER 290 23.245 33.780 16.429 1.00 0.00 N ATOM 564 CA SER 290 24.121 32.683 16.706 1.00 0.00 C ATOM 565 C SER 290 23.231 31.459 16.706 1.00 0.00 C ATOM 566 O SER 290 23.738 30.339 16.765 1.00 0.00 O ATOM 567 CB SER 290 24.785 32.753 18.094 1.00 0.00 C ATOM 568 OG SER 290 25.596 33.912 18.228 1.00 0.00 O ATOM 569 N LYS 291 21.875 31.638 16.702 1.00 0.00 N ATOM 570 CA LYS 291 20.920 30.572 16.502 1.00 0.00 C ATOM 571 C LYS 291 19.686 31.116 15.847 1.00 0.00 C ATOM 572 O LYS 291 19.437 32.308 15.933 1.00 0.00 O ATOM 573 CB LYS 291 20.311 30.077 17.830 1.00 0.00 C ATOM 574 CG LYS 291 20.409 31.061 19.009 1.00 0.00 C ATOM 575 CD LYS 291 19.399 30.743 20.116 1.00 0.00 C ATOM 576 CE LYS 291 19.557 31.663 21.336 1.00 0.00 C ATOM 577 NZ LYS 291 18.715 31.238 22.488 1.00 0.00 N ATOM 578 N GLY 292 18.817 30.264 15.270 1.00 0.00 N ATOM 579 CA GLY 292 17.610 30.751 14.652 1.00 0.00 C ATOM 580 C GLY 292 17.734 30.447 13.205 1.00 0.00 C ATOM 581 O GLY 292 18.801 30.023 12.766 1.00 0.00 O ATOM 582 N GLU 293 16.631 30.656 12.452 1.00 0.00 N ATOM 583 CA GLU 293 16.556 30.528 11.022 1.00 0.00 C ATOM 584 C GLU 293 17.608 31.308 10.285 1.00 0.00 C ATOM 585 O GLU 293 18.143 30.843 9.285 1.00 0.00 O ATOM 586 CB GLU 293 15.154 30.893 10.504 1.00 0.00 C ATOM 587 CG GLU 293 14.122 29.854 10.964 1.00 0.00 C ATOM 588 CD GLU 293 12.734 30.264 10.500 1.00 0.00 C ATOM 589 OE1 GLU 293 12.519 31.467 10.201 1.00 0.00 O ATOM 590 OE2 GLU 293 11.856 29.362 10.474 1.00 0.00 O ATOM 591 N LYS 294 17.978 32.495 10.783 1.00 0.00 N ATOM 592 CA LYS 294 18.892 33.349 10.075 1.00 0.00 C ATOM 593 C LYS 294 20.277 32.786 10.180 1.00 0.00 C ATOM 594 O LYS 294 21.127 32.991 9.315 1.00 0.00 O ATOM 595 CB LYS 294 18.923 34.740 10.713 1.00 0.00 C ATOM 596 CG LYS 294 17.829 35.663 10.175 1.00 0.00 C ATOM 597 CD LYS 294 17.599 36.900 11.050 1.00 0.00 C ATOM 598 CE LYS 294 16.521 37.829 10.474 1.00 0.00 C ATOM 599 NZ LYS 294 16.333 39.066 11.263 1.00 0.00 N ATOM 600 N ASN 295 20.524 32.023 11.247 1.00 0.00 N ATOM 601 CA ASN 295 21.870 31.663 11.586 1.00 0.00 C ATOM 602 C ASN 295 22.063 30.421 10.821 1.00 0.00 C ATOM 603 O ASN 295 23.147 30.177 10.285 1.00 0.00 O ATOM 604 CB ASN 295 22.064 31.218 13.038 1.00 0.00 C ATOM 605 CG ASN 295 23.500 30.778 13.306 1.00 0.00 C ATOM 606 OD1 ASN 295 24.457 31.547 13.215 1.00 0.00 O ATOM 607 ND2 ASN 295 23.636 29.495 13.743 1.00 0.00 N ATOM 608 N SER 296 20.976 29.608 10.787 1.00 0.00 N ATOM 609 CA SER 296 20.998 28.390 10.083 1.00 0.00 C ATOM 610 C SER 296 21.334 28.695 8.677 1.00 0.00 C ATOM 611 O SER 296 22.118 27.899 8.181 1.00 0.00 O ATOM 612 CB SER 296 19.797 27.434 10.221 1.00 0.00 C ATOM 613 OG SER 296 18.568 28.063 9.926 1.00 0.00 O ATOM 614 N LEU 297 20.834 29.812 8.052 1.00 0.00 N ATOM 615 CA LEU 297 21.073 30.234 6.673 1.00 0.00 C ATOM 616 C LEU 297 22.501 30.211 6.147 1.00 0.00 C ATOM 617 O LEU 297 22.765 30.597 5.013 1.00 0.00 O ATOM 618 CB LEU 297 20.521 31.651 6.365 1.00 0.00 C ATOM 619 CG LEU 297 20.326 32.058 4.865 1.00 0.00 C ATOM 620 CD1 LEU 297 19.378 31.165 4.058 1.00 0.00 C ATOM 621 CD2 LEU 297 19.991 33.516 4.734 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 463 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 87.00 33.6 122 45.5 268 ARMSMC SECONDARY STRUCTURE . . 85.58 38.0 79 43.9 180 ARMSMC SURFACE . . . . . . . . 87.90 36.7 79 48.2 164 ARMSMC BURIED . . . . . . . . 85.31 27.9 43 41.3 104 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 91.77 34.5 55 47.0 117 ARMSSC1 RELIABLE SIDE CHAINS . 87.77 37.5 48 45.7 105 ARMSSC1 SECONDARY STRUCTURE . . 88.43 39.5 38 46.3 82 ARMSSC1 SURFACE . . . . . . . . 98.82 25.7 35 49.3 71 ARMSSC1 BURIED . . . . . . . . 77.90 50.0 20 43.5 46 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.58 54.8 31 39.7 78 ARMSSC2 RELIABLE SIDE CHAINS . 70.37 54.5 22 40.7 54 ARMSSC2 SECONDARY STRUCTURE . . 72.73 55.0 20 39.2 51 ARMSSC2 SURFACE . . . . . . . . 79.81 61.1 18 38.3 47 ARMSSC2 BURIED . . . . . . . . 69.31 46.2 13 41.9 31 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 52.77 69.2 13 48.1 27 ARMSSC3 RELIABLE SIDE CHAINS . 44.93 75.0 12 50.0 24 ARMSSC3 SECONDARY STRUCTURE . . 54.30 66.7 6 37.5 16 ARMSSC3 SURFACE . . . . . . . . 53.47 75.0 12 54.5 22 ARMSSC3 BURIED . . . . . . . . 43.38 0.0 1 20.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 100.47 44.4 9 56.2 16 ARMSSC4 RELIABLE SIDE CHAINS . 100.47 44.4 9 56.2 16 ARMSSC4 SECONDARY STRUCTURE . . 106.10 40.0 5 45.5 11 ARMSSC4 SURFACE . . . . . . . . 100.47 44.4 9 69.2 13 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 13.91 (Number of atoms: 63) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 13.91 63 46.7 135 CRMSCA CRN = ALL/NP . . . . . 0.2208 CRMSCA SECONDARY STRUCTURE . . 12.86 41 45.6 90 CRMSCA SURFACE . . . . . . . . 14.87 41 49.4 83 CRMSCA BURIED . . . . . . . . 11.92 22 42.3 52 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 13.95 309 46.5 664 CRMSMC SECONDARY STRUCTURE . . 12.92 202 45.4 445 CRMSMC SURFACE . . . . . . . . 14.96 201 49.3 408 CRMSMC BURIED . . . . . . . . 11.83 108 42.2 256 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 14.60 211 42.5 496 CRMSSC RELIABLE SIDE CHAINS . 14.82 175 42.7 410 CRMSSC SECONDARY STRUCTURE . . 13.45 146 42.8 341 CRMSSC SURFACE . . . . . . . . 16.40 128 43.7 293 CRMSSC BURIED . . . . . . . . 11.28 83 40.9 203 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 14.22 463 44.7 1036 CRMSALL SECONDARY STRUCTURE . . 13.11 310 44.2 701 CRMSALL SURFACE . . . . . . . . 15.51 292 46.7 625 CRMSALL BURIED . . . . . . . . 11.69 171 41.6 411 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.729 1.000 0.500 63 46.7 135 ERRCA SECONDARY STRUCTURE . . 11.781 1.000 0.500 41 45.6 90 ERRCA SURFACE . . . . . . . . 13.735 1.000 0.500 41 49.4 83 ERRCA BURIED . . . . . . . . 10.854 1.000 0.500 22 42.3 52 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.740 1.000 0.500 309 46.5 664 ERRMC SECONDARY STRUCTURE . . 11.822 1.000 0.500 202 45.4 445 ERRMC SURFACE . . . . . . . . 13.802 1.000 0.500 201 49.3 408 ERRMC BURIED . . . . . . . . 10.764 1.000 0.500 108 42.2 256 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 13.330 1.000 0.500 211 42.5 496 ERRSC RELIABLE SIDE CHAINS . 13.537 1.000 0.500 175 42.7 410 ERRSC SECONDARY STRUCTURE . . 12.240 1.000 0.500 146 42.8 341 ERRSC SURFACE . . . . . . . . 15.285 1.000 0.500 128 43.7 293 ERRSC BURIED . . . . . . . . 10.315 1.000 0.500 83 40.9 203 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.977 1.000 0.500 463 44.7 1036 ERRALL SECONDARY STRUCTURE . . 11.972 1.000 0.500 310 44.2 701 ERRALL SURFACE . . . . . . . . 14.342 1.000 0.500 292 46.7 625 ERRALL BURIED . . . . . . . . 10.647 1.000 0.500 171 41.6 411 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 3 24 63 135 DISTCA CA (P) 0.00 0.00 0.00 2.22 17.78 135 DISTCA CA (RMS) 0.00 0.00 0.00 4.57 7.44 DISTCA ALL (N) 0 0 1 20 166 463 1036 DISTALL ALL (P) 0.00 0.00 0.10 1.93 16.02 1036 DISTALL ALL (RMS) 0.00 0.00 2.13 4.21 7.34 DISTALL END of the results output