####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 55 ( 393), selected 55 , name T0571TS207_1-D2 # Molecule2: number of CA atoms 135 ( 1036), selected 55 , name T0571-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0571TS207_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 228 - 249 4.87 18.78 LCS_AVERAGE: 11.88 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 244 - 253 1.64 16.67 LCS_AVERAGE: 5.87 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 246 - 252 0.97 17.93 LCS_AVERAGE: 3.66 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 55 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 207 G 207 3 7 9 3 3 4 5 6 8 8 8 9 9 9 9 10 11 14 15 16 16 16 19 LCS_GDT I 208 I 208 3 7 9 3 3 4 5 6 8 8 8 9 9 9 11 14 15 15 15 16 17 17 21 LCS_GDT D 209 D 209 3 7 9 3 3 4 5 6 8 8 8 9 9 9 11 14 15 16 16 21 23 23 25 LCS_GDT H 210 H 210 5 7 9 3 5 5 5 6 8 8 8 9 9 9 11 14 17 17 19 21 23 23 25 LCS_GDT A 211 A 211 5 7 9 4 5 5 5 6 8 8 8 9 9 9 11 14 17 17 19 21 23 23 25 LCS_GDT T 212 T 212 5 7 9 4 5 5 5 6 8 8 8 9 9 10 11 14 15 16 16 21 23 23 25 LCS_GDT V 213 V 213 5 7 9 4 5 5 5 6 8 8 8 9 9 10 11 14 17 17 19 21 23 24 29 LCS_GDT A 214 A 214 5 6 9 4 5 5 5 6 8 8 8 9 9 10 11 14 15 16 19 21 23 23 26 LCS_GDT G 215 G 215 3 6 9 3 3 3 3 6 7 7 7 9 9 10 13 14 17 17 19 21 23 26 29 LCS_GDT E 228 E 228 4 9 22 4 4 4 6 9 10 11 13 15 15 18 20 21 21 21 22 23 23 23 26 LCS_GDT N 229 N 229 4 9 22 4 4 4 6 9 10 11 13 15 15 18 20 21 21 21 22 23 23 23 26 LCS_GDT D 230 D 230 5 9 22 4 5 5 6 9 10 11 13 15 15 18 20 21 21 21 22 23 24 25 26 LCS_GDT E 231 E 231 5 9 22 4 5 5 6 9 10 11 13 15 15 18 20 21 22 24 27 29 30 31 32 LCS_GDT V 232 V 232 5 9 22 3 5 5 5 9 10 11 13 15 15 18 20 21 22 25 27 29 30 31 32 LCS_GDT V 233 V 233 5 9 22 4 5 7 8 9 10 11 13 15 15 18 20 24 25 26 27 29 30 31 32 LCS_GDT N 234 N 234 5 9 22 4 5 7 8 9 10 11 13 15 15 18 21 24 25 26 27 29 30 31 32 LCS_GDT I 235 I 235 5 9 22 4 5 7 8 9 10 11 13 15 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT S 236 S 236 5 9 22 4 5 7 8 9 10 11 13 15 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT T 237 T 237 5 7 22 1 5 7 8 9 10 11 13 15 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT K 238 K 238 4 7 22 0 4 5 6 6 7 8 11 12 14 20 21 23 24 24 27 29 30 31 32 LCS_GDT S 239 S 239 4 7 22 3 5 7 8 9 9 10 13 15 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT M 240 M 240 4 5 22 3 4 5 5 6 7 10 13 15 15 16 19 24 25 26 27 29 30 31 32 LCS_GDT K 241 K 241 3 4 22 3 3 3 4 6 8 11 13 15 15 18 20 24 25 26 27 29 30 31 32 LCS_GDT D 242 D 242 4 9 22 3 3 4 7 9 11 12 13 15 15 18 20 22 24 26 27 29 30 31 32 LCS_GDT N 243 N 243 4 9 22 3 3 4 6 8 11 12 13 15 15 18 20 24 25 26 27 29 30 31 32 LCS_GDT L 244 L 244 6 10 22 3 4 6 9 11 13 13 13 14 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT L 245 L 245 6 10 22 4 4 6 10 12 13 13 13 14 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT T 246 T 246 7 10 22 4 6 7 9 12 13 13 13 14 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT L 247 L 247 7 10 22 4 6 7 10 12 13 13 13 14 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT K 248 K 248 7 10 22 4 5 7 9 12 13 13 13 14 14 20 21 24 25 26 27 29 30 31 32 LCS_GDT T 249 T 249 7 10 22 4 6 7 10 12 13 13 13 14 14 20 21 24 25 26 27 29 30 31 32 LCS_GDT K 250 K 250 7 10 18 4 6 7 10 12 13 13 13 14 14 20 21 24 25 26 27 29 30 31 32 LCS_GDT D 251 D 251 7 10 18 4 6 7 10 12 13 13 13 14 14 20 21 24 25 26 27 29 30 31 32 LCS_GDT E 252 E 252 7 10 18 4 6 7 10 12 13 13 13 14 14 17 21 24 25 26 27 29 30 31 32 LCS_GDT S 253 S 253 5 10 18 3 3 6 10 12 13 13 13 14 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT G 254 G 254 3 3 18 3 3 3 7 9 9 9 11 12 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT A 266 A 266 3 3 13 3 3 3 3 5 5 6 9 11 11 11 12 15 15 15 17 20 20 21 23 LCS_GDT E 267 E 267 3 9 13 3 4 5 9 9 9 10 10 11 12 14 15 16 16 16 17 20 20 21 24 LCS_GDT D 268 D 268 3 9 13 3 3 3 9 9 9 10 10 11 12 14 15 16 16 16 17 20 20 21 24 LCS_GDT G 269 G 269 6 9 13 4 4 6 9 9 9 10 10 11 12 14 15 16 16 16 17 20 20 21 24 LCS_GDT S 270 S 270 6 9 13 4 4 6 9 9 9 10 10 11 12 14 15 16 16 16 17 21 23 26 27 LCS_GDT C 271 C 271 6 9 13 4 4 6 9 9 9 10 10 11 12 14 15 16 16 18 20 22 24 26 27 LCS_GDT T 272 T 272 6 9 13 4 4 6 9 9 9 10 10 11 12 14 15 16 18 22 24 28 30 31 31 LCS_GDT V 273 V 273 6 9 13 3 4 6 9 9 9 10 10 11 12 14 18 21 25 26 27 29 30 31 32 LCS_GDT H 274 H 274 6 9 13 3 4 6 9 9 9 10 11 13 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT S 275 S 275 5 9 13 3 4 5 10 12 13 13 13 14 15 20 21 24 25 26 27 28 30 31 32 LCS_GDT G 276 G 276 3 5 13 3 3 4 5 6 6 10 10 13 14 14 15 23 24 24 24 26 29 30 32 LCS_GDT S 277 S 277 3 5 13 3 3 4 4 4 5 6 7 8 10 14 15 15 18 23 23 24 28 28 31 LCS_GDT Q 278 Q 278 3 7 13 4 6 7 10 12 13 13 13 14 14 20 21 23 24 25 26 28 29 30 32 LCS_GDT N 279 N 279 6 7 10 4 5 6 10 12 13 13 13 14 15 20 21 23 24 26 27 28 30 30 32 LCS_GDT V 280 V 280 6 7 10 4 5 7 8 9 11 12 13 14 15 20 21 24 25 26 27 29 30 31 32 LCS_GDT V 281 V 281 6 7 10 4 5 6 6 7 7 9 9 12 13 15 19 24 25 26 27 29 30 31 32 LCS_GDT V 282 V 282 6 7 10 4 5 6 6 7 7 9 9 9 10 11 13 17 22 24 27 29 30 31 31 LCS_GDT S 283 S 283 6 7 9 3 5 6 6 7 7 9 9 9 10 11 13 13 14 18 20 22 26 27 28 LCS_GDT G 284 G 284 6 7 9 3 4 6 6 7 7 9 9 9 10 10 13 13 14 15 20 20 23 26 27 LCS_AVERAGE LCS_A: 7.14 ( 3.66 5.87 11.88 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 10 12 13 13 13 15 15 20 21 24 25 26 27 29 30 31 32 GDT PERCENT_AT 2.96 4.44 5.19 7.41 8.89 9.63 9.63 9.63 11.11 11.11 14.81 15.56 17.78 18.52 19.26 20.00 21.48 22.22 22.96 23.70 GDT RMS_LOCAL 0.14 0.66 0.82 1.43 1.59 1.79 1.79 1.79 3.38 3.38 4.57 4.67 5.29 5.39 5.50 5.79 6.08 6.13 6.41 6.46 GDT RMS_ALL_AT 15.35 18.28 18.33 17.82 17.84 17.82 17.82 17.82 19.63 19.63 16.57 16.44 15.26 15.15 15.10 14.94 14.80 15.11 14.81 15.43 # Checking swapping # possible swapping detected: D 209 D 209 # possible swapping detected: E 228 E 228 # possible swapping detected: E 231 E 231 # possible swapping detected: D 242 D 242 # possible swapping detected: E 252 E 252 # possible swapping detected: D 268 D 268 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 207 G 207 24.249 0 0.639 0.639 24.812 0.000 0.000 LGA I 208 I 208 21.600 0 0.112 1.001 23.626 0.000 0.000 LGA D 209 D 209 18.564 0 0.183 1.125 20.071 0.000 0.000 LGA H 210 H 210 17.346 0 0.449 0.915 19.987 0.000 0.000 LGA A 211 A 211 13.826 0 0.076 0.114 15.451 0.000 0.000 LGA T 212 T 212 13.660 0 0.045 0.112 15.811 0.000 0.000 LGA V 213 V 213 11.295 0 0.035 1.091 13.746 0.000 0.000 LGA A 214 A 214 10.878 0 0.297 0.281 12.213 0.000 0.000 LGA G 215 G 215 10.553 0 0.716 0.716 10.893 0.000 0.000 LGA E 228 E 228 31.958 0 0.649 1.247 39.355 0.000 0.000 LGA N 229 N 229 27.412 0 0.043 0.074 32.855 0.000 0.000 LGA D 230 D 230 21.583 0 0.121 0.828 24.089 0.000 0.000 LGA E 231 E 231 15.982 0 0.047 0.818 17.408 0.000 0.000 LGA V 232 V 232 15.183 0 0.138 0.202 18.680 0.000 0.000 LGA V 233 V 233 12.867 0 0.574 1.038 13.989 0.000 0.204 LGA N 234 N 234 12.621 0 0.074 0.555 14.438 0.000 0.000 LGA I 235 I 235 10.444 0 0.043 1.138 11.775 0.000 0.536 LGA S 236 S 236 11.265 0 0.546 0.773 11.265 0.000 0.000 LGA T 237 T 237 11.324 0 0.119 1.137 12.289 0.000 0.068 LGA K 238 K 238 10.849 0 0.617 0.962 15.732 0.000 0.000 LGA S 239 S 239 8.487 0 0.994 1.230 8.856 3.810 6.190 LGA M 240 M 240 11.464 0 0.564 1.279 18.336 0.000 0.000 LGA K 241 K 241 10.514 0 0.401 0.698 11.666 0.000 0.000 LGA D 242 D 242 11.479 0 0.570 1.179 16.437 0.000 0.000 LGA N 243 N 243 7.969 0 0.597 1.170 13.150 10.000 5.179 LGA L 244 L 244 2.969 0 0.083 1.398 8.462 65.357 42.500 LGA L 245 L 245 2.187 0 0.070 1.053 5.923 75.238 53.512 LGA T 246 T 246 2.049 0 0.087 0.244 4.987 65.119 51.497 LGA L 247 L 247 1.145 0 0.132 0.962 4.445 79.286 64.286 LGA K 248 K 248 2.233 0 0.112 1.350 3.935 79.643 60.212 LGA T 249 T 249 1.321 0 0.030 1.153 5.710 77.262 60.544 LGA K 250 K 250 0.944 0 0.049 1.480 5.845 85.952 62.698 LGA D 251 D 251 1.005 0 0.179 1.106 4.503 81.548 69.167 LGA E 252 E 252 1.235 0 0.693 0.820 6.428 75.833 50.582 LGA S 253 S 253 1.641 0 0.704 0.606 5.838 51.786 52.381 LGA G 254 G 254 8.883 0 0.059 0.059 12.296 5.119 5.119 LGA A 266 A 266 37.163 0 0.124 0.192 39.474 0.000 0.000 LGA E 267 E 267 41.919 4 0.598 0.600 42.936 0.000 0.000 LGA D 268 D 268 42.163 0 0.695 1.215 43.456 0.000 0.000 LGA G 269 G 269 38.049 0 0.722 0.722 39.059 0.000 0.000 LGA S 270 S 270 32.366 0 0.079 0.654 34.862 0.000 0.000 LGA C 271 C 271 25.647 0 0.089 0.730 27.742 0.000 0.000 LGA T 272 T 272 20.014 0 0.231 1.173 22.227 0.000 0.000 LGA V 273 V 273 13.844 0 0.100 0.142 16.222 0.000 0.000 LGA H 274 H 274 7.422 0 0.284 1.132 13.495 15.714 6.762 LGA S 275 S 275 1.626 0 0.583 0.748 3.767 61.429 61.270 LGA G 276 G 276 5.961 0 0.603 0.603 8.791 20.238 20.238 LGA S 277 S 277 6.935 0 0.681 0.757 10.861 25.833 17.698 LGA Q 278 Q 278 1.691 0 0.540 0.608 7.515 69.762 46.455 LGA N 279 N 279 2.064 0 0.624 1.193 8.103 56.905 37.083 LGA V 280 V 280 6.620 0 0.063 0.969 9.388 13.690 12.857 LGA V 281 V 281 13.303 0 0.052 0.126 17.269 0.000 0.000 LGA V 282 V 282 17.668 0 0.059 0.097 21.405 0.000 0.000 LGA S 283 S 283 25.058 0 0.030 0.557 27.774 0.000 0.000 LGA G 284 G 284 30.288 0 0.658 0.658 33.578 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 55 220 220 100.00 388 388 100.00 135 SUMMARY(RMSD_GDC): 14.601 14.519 14.423 7.552 5.830 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 55 135 4.0 13 1.79 10.370 9.496 0.687 LGA_LOCAL RMSD: 1.792 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.825 Number of assigned atoms: 55 Std_ASGN_ATOMS RMSD: 14.601 Standard rmsd on all 55 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.127536 * X + -0.812725 * Y + 0.568517 * Z + 82.144272 Y_new = -0.016537 * X + 0.574861 * Y + 0.818084 * Z + -5.583594 Z_new = -0.991696 * X + 0.094934 * Y + -0.086755 * Z + 2.481710 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.012647 1.441835 2.311213 [DEG: -172.6120 82.6111 132.4228 ] ZXZ: 2.534272 1.657661 -1.475359 [DEG: 145.2031 94.9770 -84.5318 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0571TS207_1-D2 REMARK 2: T0571-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0571TS207_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 55 135 4.0 13 1.79 9.496 14.60 REMARK ---------------------------------------------------------- MOLECULE T0571TS207_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0571 REMARK MODEL 1 REMARK PARENT 1IM3_D 1JMX_A 3E9T_A 3EAD_A ATOM 1128 N GLY 207 34.049 48.582 3.770 1.00 0.00 N ATOM 1129 CA GLY 207 33.216 49.142 4.818 1.00 0.00 C ATOM 1130 C GLY 207 31.772 48.672 4.945 1.00 0.00 C ATOM 1131 O GLY 207 31.197 48.770 6.022 1.00 0.00 O ATOM 1132 N ILE 208 31.138 48.181 3.870 1.00 0.00 N ATOM 1133 CA ILE 208 29.756 47.880 3.601 1.00 0.00 C ATOM 1134 CB ILE 208 29.500 46.658 2.792 1.00 0.00 C ATOM 1135 CG2 ILE 208 28.208 45.966 3.233 1.00 0.00 C ATOM 1136 CG1 ILE 208 29.475 47.114 1.351 1.00 0.00 C ATOM 1137 CD1 ILE 208 28.308 48.060 1.055 1.00 0.00 C ATOM 1138 C ILE 208 28.811 47.923 4.722 1.00 0.00 C ATOM 1139 O ILE 208 28.838 47.112 5.634 1.00 0.00 O ATOM 1140 N ASP 209 27.864 48.864 4.582 1.00 0.00 N ATOM 1141 CA ASP 209 26.850 49.131 5.549 1.00 0.00 C ATOM 1142 CB ASP 209 27.331 50.049 6.673 1.00 0.00 C ATOM 1143 CG ASP 209 28.465 49.354 7.402 1.00 0.00 C ATOM 1144 OD1 ASP 209 28.265 48.195 7.854 1.00 0.00 O ATOM 1145 OD2 ASP 209 29.549 49.984 7.522 1.00 0.00 O ATOM 1146 C ASP 209 25.756 49.915 4.874 1.00 0.00 C ATOM 1147 O ASP 209 25.976 50.446 3.787 1.00 0.00 O ATOM 1148 N HIS 210 24.585 49.975 5.571 1.00 0.00 N ATOM 1149 CA HIS 210 23.275 50.618 5.462 1.00 0.00 C ATOM 1150 ND1 HIS 210 22.213 52.094 8.001 1.00 0.00 N ATOM 1151 CG HIS 210 22.862 52.723 6.962 1.00 0.00 C ATOM 1152 CB HIS 210 23.064 52.148 5.596 1.00 0.00 C ATOM 1153 NE2 HIS 210 22.734 54.134 8.719 1.00 0.00 N ATOM 1154 CD2 HIS 210 23.171 53.969 7.417 1.00 0.00 C ATOM 1155 CE1 HIS 210 22.164 52.981 9.026 1.00 0.00 C ATOM 1156 C HIS 210 22.199 49.933 4.664 1.00 0.00 C ATOM 1157 O HIS 210 21.785 48.863 5.084 1.00 0.00 O ATOM 1158 N ALA 211 21.611 50.516 3.582 1.00 0.00 N ATOM 1159 CA ALA 211 20.600 49.784 2.832 1.00 0.00 C ATOM 1160 CB ALA 211 19.192 50.376 3.020 1.00 0.00 C ATOM 1161 C ALA 211 20.875 49.791 1.346 1.00 0.00 C ATOM 1162 O ALA 211 21.096 50.848 0.762 1.00 0.00 O ATOM 1163 N THR 212 20.764 48.612 0.677 1.00 0.00 N ATOM 1164 CA THR 212 21.144 48.455 -0.703 1.00 0.00 C ATOM 1165 CB THR 212 21.478 47.041 -1.075 1.00 0.00 C ATOM 1166 OG1 THR 212 22.533 46.548 -0.266 1.00 0.00 O ATOM 1167 CG2 THR 212 21.890 47.012 -2.556 1.00 0.00 C ATOM 1168 C THR 212 19.991 48.835 -1.577 1.00 0.00 C ATOM 1169 O THR 212 18.978 48.138 -1.619 1.00 0.00 O ATOM 1170 N VAL 213 20.119 49.963 -2.309 1.00 0.00 N ATOM 1171 CA VAL 213 19.077 50.350 -3.215 1.00 0.00 C ATOM 1172 CB VAL 213 18.448 51.679 -2.888 1.00 0.00 C ATOM 1173 CG1 VAL 213 17.723 51.543 -1.539 1.00 0.00 C ATOM 1174 CG2 VAL 213 19.530 52.773 -2.886 1.00 0.00 C ATOM 1175 C VAL 213 19.673 50.424 -4.592 1.00 0.00 C ATOM 1176 O VAL 213 20.593 51.192 -4.852 1.00 0.00 O ATOM 1177 N ALA 214 19.161 49.563 -5.491 1.00 0.00 N ATOM 1178 CA ALA 214 19.535 49.380 -6.869 1.00 0.00 C ATOM 1179 CB ALA 214 18.971 48.079 -7.463 1.00 0.00 C ATOM 1180 C ALA 214 19.114 50.506 -7.776 1.00 0.00 C ATOM 1181 O ALA 214 19.679 50.665 -8.857 1.00 0.00 O ATOM 1182 N GLY 215 18.043 51.249 -7.441 1.00 0.00 N ATOM 1183 CA GLY 215 17.619 52.279 -8.351 1.00 0.00 C ATOM 1184 C GLY 215 16.361 51.810 -9.009 1.00 0.00 C ATOM 1185 O GLY 215 15.958 50.657 -8.861 1.00 0.00 O ATOM 1186 N GLU 228 15.706 52.703 -9.776 1.00 0.00 N ATOM 1187 CA GLU 228 14.429 52.349 -10.320 1.00 0.00 C ATOM 1188 CB GLU 228 13.648 53.512 -10.961 1.00 0.00 C ATOM 1189 CG GLU 228 14.311 54.113 -12.199 1.00 0.00 C ATOM 1190 CD GLU 228 13.285 55.022 -12.860 1.00 0.00 C ATOM 1191 OE1 GLU 228 12.103 54.985 -12.428 1.00 0.00 O ATOM 1192 OE2 GLU 228 13.668 55.761 -13.806 1.00 0.00 O ATOM 1193 C GLU 228 14.559 51.275 -11.348 1.00 0.00 C ATOM 1194 O GLU 228 15.516 51.214 -12.119 1.00 0.00 O ATOM 1195 N ASN 229 13.532 50.404 -11.368 1.00 0.00 N ATOM 1196 CA ASN 229 13.381 49.302 -12.272 1.00 0.00 C ATOM 1197 CB ASN 229 13.541 49.722 -13.738 1.00 0.00 C ATOM 1198 CG ASN 229 12.306 50.523 -14.127 1.00 0.00 C ATOM 1199 OD1 ASN 229 11.178 50.092 -13.890 1.00 0.00 O ATOM 1200 ND2 ASN 229 12.518 51.721 -14.731 1.00 0.00 N ATOM 1201 C ASN 229 14.356 48.210 -11.962 1.00 0.00 C ATOM 1202 O ASN 229 14.478 47.257 -12.732 1.00 0.00 O ATOM 1203 N ASP 230 15.046 48.288 -10.808 1.00 0.00 N ATOM 1204 CA ASP 230 15.920 47.218 -10.429 1.00 0.00 C ATOM 1205 CB ASP 230 17.363 47.673 -10.153 1.00 0.00 C ATOM 1206 CG ASP 230 18.224 46.437 -9.937 1.00 0.00 C ATOM 1207 OD1 ASP 230 17.656 45.313 -9.921 1.00 0.00 O ATOM 1208 OD2 ASP 230 19.464 46.603 -9.781 1.00 0.00 O ATOM 1209 C ASP 230 15.362 46.672 -9.152 1.00 0.00 C ATOM 1210 O ASP 230 15.090 47.425 -8.218 1.00 0.00 O ATOM 1211 N GLU 231 15.173 45.338 -9.078 1.00 0.00 N ATOM 1212 CA GLU 231 14.551 44.772 -7.916 1.00 0.00 C ATOM 1213 CB GLU 231 13.366 43.855 -8.275 1.00 0.00 C ATOM 1214 CG GLU 231 12.665 43.221 -7.072 1.00 0.00 C ATOM 1215 CD GLU 231 11.531 42.353 -7.604 1.00 0.00 C ATOM 1216 OE1 GLU 231 10.755 42.856 -8.461 1.00 0.00 O ATOM 1217 OE2 GLU 231 11.427 41.177 -7.168 1.00 0.00 O ATOM 1218 C GLU 231 15.536 43.931 -7.162 1.00 0.00 C ATOM 1219 O GLU 231 16.252 43.115 -7.741 1.00 0.00 O ATOM 1220 N VAL 232 15.589 44.131 -5.827 1.00 0.00 N ATOM 1221 CA VAL 232 16.417 43.328 -4.973 1.00 0.00 C ATOM 1222 CB VAL 232 16.895 44.085 -3.770 1.00 0.00 C ATOM 1223 CG1 VAL 232 17.603 43.112 -2.817 1.00 0.00 C ATOM 1224 CG2 VAL 232 17.772 45.257 -4.242 1.00 0.00 C ATOM 1225 C VAL 232 15.513 42.245 -4.480 1.00 0.00 C ATOM 1226 O VAL 232 14.808 42.422 -3.487 1.00 0.00 O ATOM 1227 N VAL 233 15.495 41.093 -5.182 1.00 0.00 N ATOM 1228 CA VAL 233 14.586 40.054 -4.793 1.00 0.00 C ATOM 1229 CB VAL 233 14.437 38.970 -5.823 1.00 0.00 C ATOM 1230 CG1 VAL 233 15.772 38.231 -5.966 1.00 0.00 C ATOM 1231 CG2 VAL 233 13.271 38.060 -5.401 1.00 0.00 C ATOM 1232 C VAL 233 14.984 39.446 -3.489 1.00 0.00 C ATOM 1233 O VAL 233 14.147 39.289 -2.602 1.00 0.00 O ATOM 1234 N ASN 234 16.273 39.092 -3.317 1.00 0.00 N ATOM 1235 CA ASN 234 16.626 38.468 -2.075 1.00 0.00 C ATOM 1236 CB ASN 234 16.713 36.937 -2.180 1.00 0.00 C ATOM 1237 CG ASN 234 15.303 36.406 -2.396 1.00 0.00 C ATOM 1238 OD1 ASN 234 15.935 36.877 -1.450 1.00 0.00 O ATOM 1239 ND2 ASN 234 15.516 36.124 -3.709 1.00 0.00 N ATOM 1240 C ASN 234 17.965 38.962 -1.644 1.00 0.00 C ATOM 1241 O ASN 234 18.890 39.085 -2.445 1.00 0.00 O ATOM 1242 N ILE 235 18.103 39.249 -0.338 1.00 0.00 N ATOM 1243 CA ILE 235 19.363 39.682 0.176 1.00 0.00 C ATOM 1244 CB ILE 235 19.217 40.786 1.191 1.00 0.00 C ATOM 1245 CG2 ILE 235 18.677 42.017 0.446 1.00 0.00 C ATOM 1246 CG1 ILE 235 18.347 40.373 2.392 1.00 0.00 C ATOM 1247 CD1 ILE 235 18.416 41.353 3.562 1.00 0.00 C ATOM 1248 C ILE 235 19.984 38.467 0.782 1.00 0.00 C ATOM 1249 O ILE 235 19.630 38.023 1.872 1.00 0.00 O ATOM 1250 N SER 236 20.944 37.872 0.056 1.00 0.00 N ATOM 1251 CA SER 236 21.494 36.642 0.527 1.00 0.00 C ATOM 1252 CB SER 236 22.534 36.039 -0.425 1.00 0.00 C ATOM 1253 OG SER 236 23.037 34.822 0.106 1.00 0.00 O ATOM 1254 C SER 236 22.162 36.857 1.845 1.00 0.00 C ATOM 1255 O SER 236 21.893 36.126 2.795 1.00 0.00 O ATOM 1256 N THR 237 23.037 37.872 1.960 1.00 0.00 N ATOM 1257 CA THR 237 23.716 37.958 3.221 1.00 0.00 C ATOM 1258 CB THR 237 25.015 37.197 3.215 1.00 0.00 C ATOM 1259 OG1 THR 237 25.660 37.308 4.475 1.00 0.00 O ATOM 1260 CG2 THR 237 25.910 37.705 2.071 1.00 0.00 C ATOM 1261 C THR 237 23.953 39.381 3.620 1.00 0.00 C ATOM 1262 O THR 237 23.922 40.283 2.781 1.00 0.00 O ATOM 1263 N LYS 238 24.537 39.380 5.114 1.00 0.00 N ATOM 1264 CA LYS 238 25.377 39.899 6.497 1.00 0.00 C ATOM 1265 CB LYS 238 24.767 39.560 7.864 1.00 0.00 C ATOM 1266 CG LYS 238 23.292 39.841 8.140 1.00 0.00 C ATOM 1267 CD LYS 238 23.018 39.543 9.620 1.00 0.00 C ATOM 1268 CE LYS 238 23.441 40.741 10.470 1.00 0.00 C ATOM 1269 NZ LYS 238 23.513 40.411 11.911 1.00 0.00 N ATOM 1270 C LYS 238 26.974 39.131 6.724 1.00 0.00 C ATOM 1271 O LYS 238 26.922 38.023 7.264 1.00 0.00 O ATOM 1272 N SER 239 28.455 39.763 6.493 1.00 0.00 N ATOM 1273 CA SER 239 30.291 40.178 4.561 1.00 0.00 C ATOM 1274 CB SER 239 31.269 41.514 3.905 1.00 0.00 C ATOM 1275 OG SER 239 32.335 42.245 4.606 1.00 0.00 O ATOM 1276 C SER 239 31.167 39.680 3.444 1.00 0.00 C ATOM 1277 O SER 239 31.513 40.714 2.936 1.00 0.00 O ATOM 1278 N MET 240 31.359 38.505 2.869 1.00 0.00 N ATOM 1279 CA MET 240 32.617 38.162 2.327 1.00 0.00 C ATOM 1280 CB MET 240 32.349 37.155 1.227 1.00 0.00 C ATOM 1281 CG MET 240 31.451 35.983 1.662 1.00 0.00 C ATOM 1282 SD MET 240 30.918 34.803 0.381 1.00 0.00 S ATOM 1283 CE MET 240 29.574 34.286 1.489 1.00 0.00 C ATOM 1284 C MET 240 33.598 39.324 2.096 1.00 0.00 C ATOM 1285 O MET 240 33.502 40.192 1.273 1.00 0.00 O ATOM 1286 N LYS 241 34.610 39.597 2.831 1.00 0.00 N ATOM 1287 CA LYS 241 35.332 40.707 2.357 1.00 0.00 C ATOM 1288 CB LYS 241 35.930 41.711 3.348 1.00 0.00 C ATOM 1289 CG LYS 241 35.200 42.985 3.826 1.00 0.00 C ATOM 1290 CD LYS 241 35.890 43.863 4.890 1.00 0.00 C ATOM 1291 CE LYS 241 35.125 43.918 6.216 1.00 0.00 C ATOM 1292 NZ LYS 241 35.282 45.237 6.873 1.00 0.00 N ATOM 1293 C LYS 241 36.465 40.191 1.492 1.00 0.00 C ATOM 1294 O LYS 241 37.625 40.468 1.724 1.00 0.00 O ATOM 1295 N ASP 242 36.115 39.472 0.438 1.00 0.00 N ATOM 1296 CA ASP 242 36.732 38.809 -0.648 1.00 0.00 C ATOM 1297 CB ASP 242 37.003 37.366 -0.233 1.00 0.00 C ATOM 1298 CG ASP 242 37.639 36.417 -1.230 1.00 0.00 C ATOM 1299 OD1 ASP 242 37.386 36.468 -2.458 1.00 0.00 O ATOM 1300 OD2 ASP 242 38.355 35.515 -0.725 1.00 0.00 O ATOM 1301 C ASP 242 35.555 38.904 -1.556 1.00 0.00 C ATOM 1302 O ASP 242 35.696 38.969 -2.770 1.00 0.00 O ATOM 1303 N ASN 243 34.350 38.991 -0.887 1.00 0.00 N ATOM 1304 CA ASN 243 32.950 39.057 -1.325 1.00 0.00 C ATOM 1305 CB ASN 243 32.492 37.540 -1.675 1.00 0.00 C ATOM 1306 CG ASN 243 33.084 36.625 -2.792 1.00 0.00 C ATOM 1307 OD1 ASN 243 32.281 36.243 -3.643 1.00 0.00 O ATOM 1308 ND2 ASN 243 34.383 36.222 -2.797 1.00 0.00 N ATOM 1309 C ASN 243 31.722 40.114 -0.782 1.00 0.00 C ATOM 1310 O ASN 243 31.278 40.767 -1.726 1.00 0.00 O ATOM 1311 N LEU 244 31.137 40.643 0.464 1.00 0.00 N ATOM 1312 CA LEU 244 30.029 40.306 -0.325 1.00 0.00 C ATOM 1313 CB LEU 244 29.963 38.788 -0.563 1.00 0.00 C ATOM 1314 CG LEU 244 28.800 38.313 -1.441 1.00 0.00 C ATOM 1315 CD1 LEU 244 28.845 38.976 -2.824 1.00 0.00 C ATOM 1316 CD2 LEU 244 28.793 36.779 -1.538 1.00 0.00 C ATOM 1317 C LEU 244 28.784 40.750 0.334 1.00 0.00 C ATOM 1318 O LEU 244 28.466 40.361 1.454 1.00 0.00 O ATOM 1319 N LEU 245 28.083 41.656 -0.355 1.00 0.00 N ATOM 1320 CA LEU 245 26.735 41.933 -0.005 1.00 0.00 C ATOM 1321 CB LEU 245 26.330 43.403 -0.232 1.00 0.00 C ATOM 1322 CG LEU 245 24.857 43.720 0.097 1.00 0.00 C ATOM 1323 CD1 LEU 245 23.898 43.088 -0.924 1.00 0.00 C ATOM 1324 CD2 LEU 245 24.516 43.349 1.547 1.00 0.00 C ATOM 1325 C LEU 245 26.075 41.104 -1.043 1.00 0.00 C ATOM 1326 O LEU 245 26.145 41.440 -2.224 1.00 0.00 O ATOM 1327 N THR 246 25.454 39.981 -0.637 1.00 0.00 N ATOM 1328 CA THR 246 24.953 39.083 -1.633 1.00 0.00 C ATOM 1329 CB THR 246 24.907 37.650 -1.205 1.00 0.00 C ATOM 1330 OG1 THR 246 26.178 37.240 -0.726 1.00 0.00 O ATOM 1331 CG2 THR 246 24.538 36.806 -2.438 1.00 0.00 C ATOM 1332 C THR 246 23.558 39.490 -1.903 1.00 0.00 C ATOM 1333 O THR 246 22.806 39.811 -0.983 1.00 0.00 O ATOM 1334 N LEU 247 23.181 39.494 -3.191 1.00 0.00 N ATOM 1335 CA LEU 247 21.892 40.025 -3.481 1.00 0.00 C ATOM 1336 CB LEU 247 22.076 41.532 -3.764 1.00 0.00 C ATOM 1337 CG LEU 247 20.854 42.449 -3.663 1.00 0.00 C ATOM 1338 CD1 LEU 247 19.719 42.011 -4.594 1.00 0.00 C ATOM 1339 CD2 LEU 247 20.448 42.650 -2.195 1.00 0.00 C ATOM 1340 C LEU 247 21.442 39.362 -4.751 1.00 0.00 C ATOM 1341 O LEU 247 22.248 39.104 -5.644 1.00 0.00 O ATOM 1342 N LYS 248 20.143 39.035 -4.861 1.00 0.00 N ATOM 1343 CA LYS 248 19.637 38.511 -6.096 1.00 0.00 C ATOM 1344 CB LYS 248 18.591 37.398 -5.923 1.00 0.00 C ATOM 1345 CG LYS 248 19.094 36.114 -5.271 1.00 0.00 C ATOM 1346 CD LYS 248 20.116 35.333 -6.096 1.00 0.00 C ATOM 1347 CE LYS 248 20.581 34.055 -5.394 1.00 0.00 C ATOM 1348 NZ LYS 248 21.401 33.230 -6.305 1.00 0.00 N ATOM 1349 C LYS 248 18.902 39.665 -6.684 1.00 0.00 C ATOM 1350 O LYS 248 18.101 40.291 -5.992 1.00 0.00 O ATOM 1351 N THR 249 19.149 40.007 -7.963 1.00 0.00 N ATOM 1352 CA THR 249 18.446 41.162 -8.436 1.00 0.00 C ATOM 1353 CB THR 249 19.334 42.341 -8.717 1.00 0.00 C ATOM 1354 OG1 THR 249 20.237 42.041 -9.771 1.00 0.00 O ATOM 1355 CG2 THR 249 20.115 42.687 -7.439 1.00 0.00 C ATOM 1356 C THR 249 17.779 40.815 -9.715 1.00 0.00 C ATOM 1357 O THR 249 18.080 39.800 -10.338 1.00 0.00 O ATOM 1358 N LYS 250 16.801 41.647 -10.109 1.00 0.00 N ATOM 1359 CA LYS 250 16.134 41.444 -11.355 1.00 0.00 C ATOM 1360 CB LYS 250 14.876 40.562 -11.234 1.00 0.00 C ATOM 1361 CG LYS 250 13.821 41.091 -10.260 1.00 0.00 C ATOM 1362 CD LYS 250 12.966 42.229 -10.815 1.00 0.00 C ATOM 1363 CE LYS 250 11.748 41.727 -11.587 1.00 0.00 C ATOM 1364 NZ LYS 250 12.179 40.762 -12.621 1.00 0.00 N ATOM 1365 C LYS 250 15.754 42.793 -11.869 1.00 0.00 C ATOM 1366 O LYS 250 15.289 43.650 -11.122 1.00 0.00 O ATOM 1367 N ASP 251 15.990 43.030 -13.171 1.00 0.00 N ATOM 1368 CA ASP 251 15.620 44.284 -13.753 1.00 0.00 C ATOM 1369 CB ASP 251 16.695 44.881 -14.677 1.00 0.00 C ATOM 1370 CG ASP 251 17.869 45.329 -13.818 1.00 0.00 C ATOM 1371 OD1 ASP 251 17.774 45.201 -12.569 1.00 0.00 O ATOM 1372 OD2 ASP 251 18.878 45.805 -14.404 1.00 0.00 O ATOM 1373 C ASP 251 14.417 44.014 -14.588 1.00 0.00 C ATOM 1374 O ASP 251 14.341 43.000 -15.278 1.00 0.00 O ATOM 1375 N GLU 252 13.418 44.909 -14.528 1.00 0.00 N ATOM 1376 CA GLU 252 12.254 44.667 -15.319 1.00 0.00 C ATOM 1377 CB GLU 252 11.029 45.491 -14.890 1.00 0.00 C ATOM 1378 CG GLU 252 10.452 45.040 -13.545 1.00 0.00 C ATOM 1379 CD GLU 252 9.252 45.914 -13.215 1.00 0.00 C ATOM 1380 OE1 GLU 252 9.452 47.141 -13.015 1.00 0.00 O ATOM 1381 OE2 GLU 252 8.117 45.365 -13.161 1.00 0.00 O ATOM 1382 C GLU 252 12.580 45.003 -16.728 1.00 0.00 C ATOM 1383 O GLU 252 13.448 45.830 -17.003 1.00 0.00 O ATOM 1384 N SER 253 11.906 44.330 -17.677 1.00 0.00 N ATOM 1385 CA SER 253 12.131 44.715 -19.029 1.00 0.00 C ATOM 1386 CB SER 253 11.482 43.775 -20.058 1.00 0.00 C ATOM 1387 OG SER 253 12.056 42.480 -19.969 1.00 0.00 O ATOM 1388 C SER 253 11.427 46.018 -19.089 1.00 0.00 C ATOM 1389 O SER 253 10.329 46.150 -18.561 1.00 0.00 O ATOM 1390 N GLY 254 12.031 47.040 -19.704 1.00 0.00 N ATOM 1391 CA GLY 254 11.353 48.297 -19.675 1.00 0.00 C ATOM 1392 C GLY 254 12.040 49.149 -18.660 1.00 0.00 C ATOM 1393 O GLY 254 11.793 50.350 -18.580 1.00 0.00 O ATOM 1394 N ALA 266 12.929 48.544 -17.848 1.00 0.00 N ATOM 1395 CA ALA 266 13.677 49.336 -16.924 1.00 0.00 C ATOM 1396 CB ALA 266 14.719 48.514 -16.144 1.00 0.00 C ATOM 1397 C ALA 266 14.430 50.290 -17.791 1.00 0.00 C ATOM 1398 O ALA 266 14.981 49.888 -18.814 1.00 0.00 O ATOM 1399 N GLU 267 14.464 51.580 -17.404 1.00 0.00 N ATOM 1400 CA GLU 267 15.121 52.586 -18.188 1.00 0.00 C ATOM 1401 CB GLU 267 14.915 54.004 -17.624 1.00 0.00 C ATOM 1402 CG GLU 267 15.758 55.086 -18.307 1.00 0.00 C ATOM 1403 CD GLU 267 15.097 55.481 -19.618 1.00 0.00 C ATOM 1404 OE1 GLU 267 14.053 54.869 -19.968 1.00 0.00 O ATOM 1405 OE2 GLU 267 15.628 56.408 -20.287 1.00 0.00 O ATOM 1406 C GLU 267 16.589 52.319 -18.178 1.00 0.00 C ATOM 1407 O GLU 267 17.177 52.046 -17.135 1.00 0.00 O ATOM 1408 N ASP 268 17.224 52.391 -19.363 1.00 0.00 N ATOM 1409 CA ASP 268 18.638 52.173 -19.437 1.00 0.00 C ATOM 1410 CB ASP 268 19.152 51.943 -20.870 1.00 0.00 C ATOM 1411 CG ASP 268 18.879 53.194 -21.696 1.00 0.00 C ATOM 1412 OD1 ASP 268 17.872 53.896 -21.407 1.00 0.00 O ATOM 1413 OD2 ASP 268 19.675 53.459 -22.636 1.00 0.00 O ATOM 1414 C ASP 268 19.318 53.384 -18.887 1.00 0.00 C ATOM 1415 O ASP 268 18.866 54.509 -19.095 1.00 0.00 O ATOM 1416 N GLY 269 20.429 53.174 -18.157 1.00 0.00 N ATOM 1417 CA GLY 269 21.151 54.292 -17.630 1.00 0.00 C ATOM 1418 C GLY 269 21.824 53.851 -16.375 1.00 0.00 C ATOM 1419 O GLY 269 21.591 52.750 -15.878 1.00 0.00 O ATOM 1420 N SER 270 22.701 54.713 -15.826 1.00 0.00 N ATOM 1421 CA SER 270 23.356 54.360 -14.606 1.00 0.00 C ATOM 1422 CB SER 270 24.623 55.180 -14.312 1.00 0.00 C ATOM 1423 OG SER 270 25.199 54.760 -13.083 1.00 0.00 O ATOM 1424 C SER 270 22.383 54.618 -13.508 1.00 0.00 C ATOM 1425 O SER 270 21.538 55.509 -13.598 1.00 0.00 O ATOM 1426 N CYS 271 22.468 53.817 -12.439 1.00 0.00 N ATOM 1427 CA CYS 271 21.585 54.013 -11.339 1.00 0.00 C ATOM 1428 CB CYS 271 20.781 52.757 -10.964 1.00 0.00 C ATOM 1429 SG CYS 271 19.637 52.244 -12.278 1.00 0.00 S ATOM 1430 C CYS 271 22.463 54.334 -10.190 1.00 0.00 C ATOM 1431 O CYS 271 23.545 53.765 -10.054 1.00 0.00 O ATOM 1432 N THR 272 22.039 55.283 -9.335 1.00 0.00 N ATOM 1433 CA THR 272 22.879 55.502 -8.210 1.00 0.00 C ATOM 1434 CB THR 272 22.664 56.827 -7.522 1.00 0.00 C ATOM 1435 OG1 THR 272 23.550 56.948 -6.419 1.00 0.00 O ATOM 1436 CG2 THR 272 21.200 56.982 -7.078 1.00 0.00 C ATOM 1437 C THR 272 22.593 54.370 -7.284 1.00 0.00 C ATOM 1438 O THR 272 21.549 54.310 -6.637 1.00 0.00 O ATOM 1439 N VAL 273 23.525 53.400 -7.256 1.00 0.00 N ATOM 1440 CA VAL 273 23.371 52.244 -6.428 1.00 0.00 C ATOM 1441 CB VAL 273 24.191 51.063 -6.880 1.00 0.00 C ATOM 1442 CG1 VAL 273 24.141 49.946 -5.822 1.00 0.00 C ATOM 1443 CG2 VAL 273 23.635 50.609 -8.240 1.00 0.00 C ATOM 1444 C VAL 273 23.812 52.646 -5.079 1.00 0.00 C ATOM 1445 O VAL 273 24.586 53.591 -4.925 1.00 0.00 O ATOM 1446 N HIS 274 23.279 51.969 -4.053 1.00 0.00 N ATOM 1447 CA HIS 274 23.736 52.299 -2.753 1.00 0.00 C ATOM 1448 ND1 HIS 274 21.735 54.815 -3.682 1.00 0.00 N ATOM 1449 CG HIS 274 22.608 54.564 -2.648 1.00 0.00 C ATOM 1450 CB HIS 274 22.771 53.223 -1.993 1.00 0.00 C ATOM 1451 NE2 HIS 274 22.773 56.732 -3.250 1.00 0.00 N ATOM 1452 CD2 HIS 274 23.234 55.746 -2.396 1.00 0.00 C ATOM 1453 CE1 HIS 274 21.875 56.126 -4.004 1.00 0.00 C ATOM 1454 C HIS 274 23.834 51.032 -1.982 1.00 0.00 C ATOM 1455 O HIS 274 22.823 50.475 -1.557 1.00 0.00 O ATOM 1456 N SER 275 25.066 50.495 -1.889 1.00 0.00 N ATOM 1457 CA SER 275 25.463 49.478 -0.969 1.00 0.00 C ATOM 1458 CB SER 275 26.668 48.701 -1.445 1.00 0.00 C ATOM 1459 OG SER 275 26.327 47.965 -2.602 1.00 0.00 O ATOM 1460 C SER 275 25.948 50.293 0.134 1.00 0.00 C ATOM 1461 O SER 275 26.238 49.867 1.247 1.00 0.00 O ATOM 1462 N GLY 276 25.948 51.571 -0.225 1.00 0.00 N ATOM 1463 CA GLY 276 26.347 52.715 0.478 1.00 0.00 C ATOM 1464 C GLY 276 26.584 53.658 -0.646 1.00 0.00 C ATOM 1465 O GLY 276 25.638 54.168 -1.244 1.00 0.00 O ATOM 1466 N SER 277 27.870 53.928 -0.927 1.00 0.00 N ATOM 1467 CA SER 277 28.314 54.776 -1.992 1.00 0.00 C ATOM 1468 CB SER 277 29.747 55.290 -1.771 1.00 0.00 C ATOM 1469 OG SER 277 29.801 56.091 -0.599 1.00 0.00 O ATOM 1470 C SER 277 28.298 54.135 -3.371 1.00 0.00 C ATOM 1471 O SER 277 28.099 54.854 -4.347 1.00 0.00 O ATOM 1472 N GLN 278 28.253 52.801 -3.617 1.00 0.00 N ATOM 1473 CA GLN 278 28.407 52.220 -4.975 1.00 0.00 C ATOM 1474 CB GLN 278 28.569 50.733 -4.844 1.00 0.00 C ATOM 1475 CG GLN 278 29.861 50.608 -4.073 1.00 0.00 C ATOM 1476 CD GLN 278 29.924 49.202 -3.646 1.00 0.00 C ATOM 1477 OE1 GLN 278 29.070 48.428 -4.064 1.00 0.00 O ATOM 1478 NE2 GLN 278 30.977 48.881 -2.864 1.00 0.00 N ATOM 1479 C GLN 278 27.579 52.633 -6.232 1.00 0.00 C ATOM 1480 O GLN 278 26.893 53.650 -6.283 1.00 0.00 O ATOM 1481 N ASN 279 27.676 51.887 -7.372 1.00 0.00 N ATOM 1482 CA ASN 279 27.036 52.434 -8.568 1.00 0.00 C ATOM 1483 CB ASN 279 27.973 53.423 -9.282 1.00 0.00 C ATOM 1484 CG ASN 279 27.195 54.454 -10.069 1.00 0.00 C ATOM 1485 OD1 ASN 279 26.240 55.050 -9.574 1.00 0.00 O ATOM 1486 ND2 ASN 279 27.669 54.724 -11.315 1.00 0.00 N ATOM 1487 C ASN 279 26.771 51.338 -9.571 1.00 0.00 C ATOM 1488 O ASN 279 27.674 50.534 -9.789 1.00 0.00 O ATOM 1489 N VAL 280 25.555 51.243 -10.213 1.00 0.00 N ATOM 1490 CA VAL 280 25.376 50.205 -11.231 1.00 0.00 C ATOM 1491 CB VAL 280 24.490 49.103 -10.699 1.00 0.00 C ATOM 1492 CG1 VAL 280 24.128 48.097 -11.805 1.00 0.00 C ATOM 1493 CG2 VAL 280 25.214 48.462 -9.502 1.00 0.00 C ATOM 1494 C VAL 280 24.748 50.732 -12.511 1.00 0.00 C ATOM 1495 O VAL 280 24.047 51.740 -12.513 1.00 0.00 O ATOM 1496 N VAL 281 24.970 50.041 -13.661 1.00 0.00 N ATOM 1497 CA VAL 281 24.414 50.482 -14.919 1.00 0.00 C ATOM 1498 CB VAL 281 25.445 50.637 -15.997 1.00 0.00 C ATOM 1499 CG1 VAL 281 24.731 51.006 -17.307 1.00 0.00 C ATOM 1500 CG2 VAL 281 26.485 51.671 -15.534 1.00 0.00 C ATOM 1501 C VAL 281 23.409 49.476 -15.417 1.00 0.00 C ATOM 1502 O VAL 281 23.609 48.268 -15.306 1.00 0.00 O ATOM 1503 N VAL 282 22.282 49.962 -15.982 1.00 0.00 N ATOM 1504 CA VAL 282 21.271 49.091 -16.518 1.00 0.00 C ATOM 1505 CB VAL 282 19.909 49.316 -15.932 1.00 0.00 C ATOM 1506 CG1 VAL 282 18.908 48.390 -16.646 1.00 0.00 C ATOM 1507 CG2 VAL 282 19.983 49.100 -14.410 1.00 0.00 C ATOM 1508 C VAL 282 21.176 49.395 -17.979 1.00 0.00 C ATOM 1509 O VAL 282 21.224 50.558 -18.380 1.00 0.00 O ATOM 1510 N SER 283 21.052 48.354 -18.827 1.00 0.00 N ATOM 1511 CA SER 283 20.983 48.631 -20.231 1.00 0.00 C ATOM 1512 CB SER 283 22.341 48.531 -20.947 1.00 0.00 C ATOM 1513 OG SER 283 22.185 48.819 -22.328 1.00 0.00 O ATOM 1514 C SER 283 20.078 47.629 -20.872 1.00 0.00 C ATOM 1515 O SER 283 19.761 46.591 -20.293 1.00 0.00 O ATOM 1516 N GLY 284 19.627 47.943 -22.101 1.00 0.00 N ATOM 1517 CA GLY 284 18.778 47.052 -22.826 1.00 0.00 C ATOM 1518 C GLY 284 19.681 45.984 -23.430 1.00 0.00 C ATOM 1519 O GLY 284 19.196 45.212 -24.299 1.00 0.00 O ATOM 1520 OXT GLY 284 20.875 45.929 -23.030 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 388 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 81.27 46.2 104 38.8 268 ARMSMC SECONDARY STRUCTURE . . 66.07 53.1 64 35.6 180 ARMSMC SURFACE . . . . . . . . 87.33 40.6 69 42.1 164 ARMSMC BURIED . . . . . . . . 67.76 57.1 35 33.7 104 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.54 42.2 45 38.5 117 ARMSSC1 RELIABLE SIDE CHAINS . 92.04 39.5 38 36.2 105 ARMSSC1 SECONDARY STRUCTURE . . 88.01 40.0 30 36.6 82 ARMSSC1 SURFACE . . . . . . . . 85.41 46.7 30 42.3 71 ARMSSC1 BURIED . . . . . . . . 97.28 33.3 15 32.6 46 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.67 44.0 25 32.1 78 ARMSSC2 RELIABLE SIDE CHAINS . 77.04 50.0 16 29.6 54 ARMSSC2 SECONDARY STRUCTURE . . 110.04 35.7 14 27.5 51 ARMSSC2 SURFACE . . . . . . . . 91.57 41.2 17 36.2 47 ARMSSC2 BURIED . . . . . . . . 88.74 50.0 8 25.8 31 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.65 33.3 9 33.3 27 ARMSSC3 RELIABLE SIDE CHAINS . 64.99 25.0 8 33.3 24 ARMSSC3 SECONDARY STRUCTURE . . 69.66 33.3 3 18.8 16 ARMSSC3 SURFACE . . . . . . . . 61.65 33.3 9 40.9 22 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 104.04 0.0 4 25.0 16 ARMSSC4 RELIABLE SIDE CHAINS . 104.04 0.0 4 25.0 16 ARMSSC4 SECONDARY STRUCTURE . . 106.17 0.0 2 18.2 11 ARMSSC4 SURFACE . . . . . . . . 104.04 0.0 4 30.8 13 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 14.60 (Number of atoms: 55) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 14.60 55 40.7 135 CRMSCA CRN = ALL/NP . . . . . 0.2655 CRMSCA SECONDARY STRUCTURE . . 12.25 33 36.7 90 CRMSCA SURFACE . . . . . . . . 15.28 37 44.6 83 CRMSCA BURIED . . . . . . . . 13.09 18 34.6 52 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 14.50 269 40.5 664 CRMSMC SECONDARY STRUCTURE . . 12.23 163 36.6 445 CRMSMC SURFACE . . . . . . . . 15.28 181 44.4 408 CRMSMC BURIED . . . . . . . . 12.75 88 34.4 256 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 14.43 168 33.9 496 CRMSSC RELIABLE SIDE CHAINS . 14.80 130 31.7 410 CRMSSC SECONDARY STRUCTURE . . 12.02 107 31.4 341 CRMSSC SURFACE . . . . . . . . 15.63 115 39.2 293 CRMSSC BURIED . . . . . . . . 11.40 53 26.1 203 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 14.48 388 37.5 1036 CRMSALL SECONDARY STRUCTURE . . 12.19 239 34.1 701 CRMSALL SURFACE . . . . . . . . 15.38 263 42.1 625 CRMSALL BURIED . . . . . . . . 12.38 125 30.4 411 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.580 1.000 0.500 55 40.7 135 ERRCA SECONDARY STRUCTURE . . 10.620 1.000 0.500 33 36.7 90 ERRCA SURFACE . . . . . . . . 13.276 1.000 0.500 37 44.6 83 ERRCA BURIED . . . . . . . . 11.150 1.000 0.500 18 34.6 52 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.470 1.000 0.500 269 40.5 664 ERRMC SECONDARY STRUCTURE . . 10.558 1.000 0.500 163 36.6 445 ERRMC SURFACE . . . . . . . . 13.229 1.000 0.500 181 44.4 408 ERRMC BURIED . . . . . . . . 10.908 1.000 0.500 88 34.4 256 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.458 1.000 0.500 168 33.9 496 ERRSC RELIABLE SIDE CHAINS . 12.832 1.000 0.500 130 31.7 410 ERRSC SECONDARY STRUCTURE . . 10.350 1.000 0.500 107 31.4 341 ERRSC SURFACE . . . . . . . . 13.627 1.000 0.500 115 39.2 293 ERRSC BURIED . . . . . . . . 9.921 1.000 0.500 53 26.1 203 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.490 1.000 0.500 388 37.5 1036 ERRALL SECONDARY STRUCTURE . . 10.513 1.000 0.500 239 34.1 701 ERRALL SURFACE . . . . . . . . 13.373 1.000 0.500 263 42.1 625 ERRALL BURIED . . . . . . . . 10.631 1.000 0.500 125 30.4 411 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 3 29 55 135 DISTCA CA (P) 0.00 0.00 0.00 2.22 21.48 135 DISTCA CA (RMS) 0.00 0.00 0.00 3.98 6.79 DISTCA ALL (N) 0 2 7 36 192 388 1036 DISTALL ALL (P) 0.00 0.19 0.68 3.47 18.53 1036 DISTALL ALL (RMS) 0.00 1.48 2.41 3.89 6.66 DISTALL END of the results output