####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 112 ( 448), selected 112 , name T0568TS328_1-D1 # Molecule2: number of CA atoms 120 ( 944), selected 112 , name T0568-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0568TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 61 - 89 4.90 27.37 LONGEST_CONTINUOUS_SEGMENT: 29 62 - 90 4.87 27.30 LONGEST_CONTINUOUS_SEGMENT: 29 63 - 91 5.00 27.23 LCS_AVERAGE: 17.63 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 36 - 62 1.93 32.08 LONGEST_CONTINUOUS_SEGMENT: 11 63 - 73 2.00 28.24 LCS_AVERAGE: 7.17 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 74 - 80 0.93 28.85 LONGEST_CONTINUOUS_SEGMENT: 7 90 - 96 0.86 28.09 LONGEST_CONTINUOUS_SEGMENT: 7 120 - 126 0.98 38.90 LCS_AVERAGE: 3.95 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 112 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 23 A 23 4 7 12 0 4 5 6 6 7 8 8 8 9 10 10 15 15 16 18 20 22 22 23 LCS_GDT Q 24 Q 24 4 7 12 3 4 5 6 6 7 8 8 8 9 10 10 15 15 16 18 20 22 22 23 LCS_GDT A 25 A 25 5 7 12 3 4 5 6 6 7 8 8 8 9 10 10 10 10 12 12 13 13 14 23 LCS_GDT E 26 E 26 5 7 12 3 4 5 6 6 7 8 8 8 9 10 10 11 12 13 15 15 16 17 23 LCS_GDT V 27 V 27 5 7 14 3 4 5 6 6 7 8 8 8 9 10 11 11 13 15 18 22 23 24 24 LCS_GDT R 28 R 28 5 7 19 3 4 5 6 6 7 8 9 11 12 15 17 19 20 21 22 23 24 24 25 LCS_GDT I 29 I 29 5 8 19 3 4 5 6 7 8 11 12 15 16 17 19 19 20 21 22 23 24 24 25 LCS_GDT D 30 D 30 3 8 19 3 3 4 5 7 9 11 12 15 16 17 19 19 20 21 22 23 24 24 25 LCS_GDT G 31 G 31 4 8 19 3 3 5 6 7 9 11 12 15 16 17 19 19 20 21 22 23 24 24 25 LCS_GDT P 32 P 32 4 8 19 3 3 4 6 7 9 11 12 15 16 17 19 19 20 21 22 23 24 24 25 LCS_GDT I 33 I 33 4 8 19 3 4 5 6 7 9 11 12 15 16 17 19 19 20 21 22 23 24 24 27 LCS_GDT E 34 E 34 4 8 19 3 4 5 6 7 8 10 12 15 16 17 19 19 20 21 23 29 35 37 39 LCS_GDT Y 35 Y 35 4 8 23 3 4 5 6 7 9 11 12 15 17 19 21 25 29 31 37 40 40 42 46 LCS_GDT G 36 G 36 5 11 23 3 5 6 8 10 11 12 15 16 19 21 25 28 35 36 37 40 41 44 46 LCS_GDT V 37 V 37 5 11 23 3 5 6 8 9 11 12 13 15 16 18 20 21 26 29 36 40 40 44 46 LCS_GDT F 38 F 38 5 11 23 3 5 6 8 9 11 12 13 15 16 18 20 21 22 24 25 26 27 29 40 LCS_GDT E 39 E 39 5 11 23 3 5 6 8 9 11 12 13 15 16 18 20 21 22 24 25 26 27 28 33 LCS_GDT S 40 S 40 5 11 23 0 5 6 8 9 11 12 13 15 16 17 19 19 20 23 24 26 27 27 29 LCS_GDT Q 57 Q 57 3 11 23 3 4 4 6 7 10 11 12 13 14 16 16 18 19 22 24 26 27 28 29 LCS_GDT N 58 N 58 5 11 24 3 4 5 8 9 11 12 13 15 16 18 20 21 22 24 25 29 29 30 33 LCS_GDT I 59 I 59 5 11 25 3 4 5 7 9 11 12 15 16 17 19 22 24 26 30 37 40 40 44 46 LCS_GDT Q 60 Q 60 5 11 25 3 4 6 8 10 11 12 15 16 19 20 22 27 30 36 37 40 41 44 46 LCS_GDT Q 61 Q 61 5 11 29 3 6 7 9 10 12 15 17 20 20 21 25 30 35 36 37 40 41 44 46 LCS_GDT T 62 T 62 5 11 29 1 4 5 8 11 14 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT T 63 T 63 6 11 29 3 6 6 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT E 64 E 64 6 11 29 3 6 6 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT V 65 V 65 6 11 29 3 6 6 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT P 66 P 66 6 11 29 3 6 6 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT A 67 A 67 6 11 29 3 6 6 8 14 16 17 18 20 21 22 27 30 35 36 37 40 41 44 46 LCS_GDT K 68 K 68 6 11 29 2 6 6 7 14 16 17 18 20 21 22 27 30 35 36 37 40 41 44 46 LCS_GDT L 69 L 69 3 11 29 3 6 7 9 12 16 17 18 20 21 22 26 29 35 36 37 40 41 44 46 LCS_GDT G 70 G 70 5 11 29 4 4 7 9 14 16 17 18 20 21 24 27 30 35 36 37 40 41 44 46 LCS_GDT T 71 T 71 5 11 29 4 6 7 9 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT K 72 K 72 5 11 29 4 6 7 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT F 73 F 73 5 11 29 4 4 7 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT G 74 G 74 7 10 29 3 5 7 8 9 11 16 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT M 75 M 75 7 10 29 3 6 7 9 11 15 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT R 76 R 76 7 10 29 4 6 7 9 13 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT Y 77 Y 77 7 10 29 4 6 7 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT Q 78 Q 78 7 10 29 4 6 7 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT L 79 L 79 7 9 29 4 6 7 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT S 80 S 80 7 9 29 4 6 7 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 LCS_GDT G 81 G 81 3 9 29 3 3 7 9 11 11 14 16 17 20 25 27 30 35 36 37 40 41 44 46 LCS_GDT K 82 K 82 3 5 29 3 3 3 4 5 8 11 16 17 19 25 27 30 35 36 37 40 41 44 46 LCS_GDT Q 83 Q 83 3 4 29 3 3 3 9 11 11 12 16 17 20 25 27 30 35 36 37 40 41 44 46 LCS_GDT E 84 E 84 3 4 29 3 3 3 6 10 11 12 16 17 18 22 26 29 35 36 37 40 41 44 46 LCS_GDT G 85 G 85 3 4 29 3 3 3 4 4 6 6 7 15 18 22 26 27 29 35 37 40 41 44 46 LCS_GDT D 86 D 86 5 6 29 0 4 7 9 11 11 12 16 17 20 25 27 30 35 36 37 40 41 44 46 LCS_GDT T 87 T 87 5 7 29 4 5 7 9 11 11 12 16 17 20 25 27 30 35 36 37 40 41 44 46 LCS_GDT P 88 P 88 5 10 29 4 5 7 9 11 11 12 16 17 19 25 27 30 35 36 37 40 41 44 46 LCS_GDT L 89 L 89 5 10 29 4 5 7 9 11 11 12 16 17 19 25 27 30 35 36 37 40 41 44 46 LCS_GDT T 90 T 90 7 10 29 4 5 7 9 11 11 12 16 17 18 21 25 30 35 36 37 40 41 44 46 LCS_GDT L 91 L 91 7 10 29 4 6 7 8 11 11 12 16 17 18 21 25 30 35 36 37 40 41 44 46 LCS_GDT L 92 L 92 7 10 25 4 6 7 7 8 9 12 16 17 19 25 27 30 35 36 37 40 41 44 46 LCS_GDT Y 93 Y 93 7 10 25 4 6 7 7 8 9 11 14 17 19 25 27 30 35 36 37 40 41 44 46 LCS_GDT L 94 L 94 7 10 25 4 6 7 7 8 9 10 12 15 18 25 27 30 35 36 37 40 41 44 46 LCS_GDT T 95 T 95 7 10 25 4 6 7 7 8 9 10 11 12 19 22 27 30 35 36 37 40 41 44 46 LCS_GDT P 96 P 96 7 10 25 4 6 7 7 9 10 10 10 12 13 19 23 29 31 36 37 39 41 44 46 LCS_GDT G 97 G 97 6 10 17 4 6 6 7 9 10 10 11 14 17 20 23 27 28 31 34 37 41 44 46 LCS_GDT V 98 V 98 6 8 18 4 6 6 7 9 10 13 15 17 19 22 26 27 28 30 33 37 41 44 46 LCS_GDT V 99 V 99 6 8 18 4 6 6 7 9 10 10 14 16 18 22 25 27 27 28 30 31 35 35 39 LCS_GDT T 100 T 100 6 8 18 4 6 6 7 9 11 14 15 16 18 20 25 27 27 27 28 30 30 34 36 LCS_GDT P 101 P 101 6 8 18 4 6 6 7 9 10 10 11 12 15 15 20 20 25 26 27 28 30 31 31 LCS_GDT D 102 D 102 5 8 18 4 4 5 7 9 11 13 14 16 18 18 20 22 25 26 28 30 30 31 31 LCS_GDT G 103 G 103 4 8 18 4 4 5 7 9 11 14 15 16 18 21 25 27 27 27 28 30 30 34 36 LCS_GDT Q 104 Q 104 4 8 18 3 4 4 6 6 7 9 11 12 14 18 23 27 27 27 28 30 30 34 36 LCS_GDT R 105 R 105 4 8 18 3 4 4 6 6 7 9 10 12 14 15 17 17 19 20 25 26 31 34 36 LCS_GDT H 106 H 106 4 8 18 3 4 4 5 6 7 8 10 12 14 15 17 17 20 22 23 26 29 32 34 LCS_GDT D 107 D 107 5 8 18 4 5 5 6 6 8 11 15 16 17 19 19 21 22 24 25 26 29 32 34 LCS_GDT K 108 K 108 5 8 18 4 5 5 6 6 9 11 15 16 17 19 20 21 22 24 25 26 29 32 34 LCS_GDT F 109 F 109 5 8 18 4 5 5 6 6 8 9 11 12 17 19 19 21 22 24 25 26 29 32 34 LCS_GDT E 110 E 110 5 8 18 4 5 5 6 6 8 9 11 12 14 15 17 20 21 24 25 25 28 32 34 LCS_GDT V 111 V 111 5 8 18 3 5 5 6 6 8 9 11 12 14 15 17 17 19 20 22 25 29 32 34 LCS_GDT V 112 V 112 0 7 18 0 1 2 5 6 8 9 11 12 14 15 17 17 19 20 22 25 28 32 34 LCS_GDT Q 113 Q 113 0 7 18 0 1 3 4 4 8 9 11 12 14 15 17 17 19 21 22 25 29 32 34 LCS_GDT K 114 K 114 0 3 18 1 1 2 3 4 6 7 8 10 14 15 17 17 22 24 24 27 29 32 34 LCS_GDT L 115 L 115 0 3 18 0 1 2 2 4 6 7 8 10 14 15 17 17 22 24 26 27 29 32 36 LCS_GDT V 116 V 116 0 3 18 0 2 2 3 5 6 13 17 19 21 21 24 25 28 32 36 38 41 44 46 LCS_GDT P 117 P 117 0 3 18 1 2 2 2 4 9 15 17 19 21 21 22 25 28 32 34 38 41 43 46 LCS_GDT G 118 G 118 0 0 17 1 1 2 4 4 9 13 15 17 20 21 24 27 28 31 33 38 41 44 46 LCS_GDT A 119 A 119 3 10 17 3 3 5 7 8 9 11 11 12 13 13 14 15 16 16 21 24 28 30 33 LCS_GDT P 120 P 120 7 10 17 4 6 6 7 9 10 11 11 12 13 13 15 15 16 16 18 20 22 22 23 LCS_GDT T 121 T 121 7 10 17 4 6 6 7 9 10 11 11 12 13 14 15 15 16 17 19 20 22 22 23 LCS_GDT D 122 D 122 7 10 17 4 6 6 7 9 10 11 12 12 13 14 15 15 16 17 19 20 22 22 22 LCS_GDT V 123 V 123 7 10 17 4 6 6 7 9 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT M 124 M 124 7 10 17 4 6 6 7 9 10 11 12 12 13 14 16 16 16 17 19 20 22 22 22 LCS_GDT A 125 A 125 7 10 17 4 6 6 7 9 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT Y 126 Y 126 7 10 17 3 4 6 7 9 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT E 127 E 127 5 10 17 3 4 6 7 9 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT F 128 F 128 5 10 17 3 4 5 6 9 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT T 129 T 129 5 10 17 3 4 6 6 8 10 11 12 12 13 14 16 16 16 17 19 20 22 22 22 LCS_GDT E 130 E 130 4 10 17 3 4 6 6 9 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT P 131 P 131 4 10 17 3 3 5 6 8 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT H 132 H 132 3 10 17 3 3 4 6 8 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT E 133 E 133 3 10 17 0 3 3 4 8 10 11 12 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT V 134 V 134 3 4 17 0 3 3 3 7 8 10 10 12 13 14 16 16 16 17 19 20 22 22 23 LCS_GDT V 135 V 135 3 9 17 3 3 4 4 5 7 9 10 12 13 14 16 16 16 17 19 20 22 22 22 LCS_GDT K 136 K 136 3 9 17 3 3 5 8 8 9 10 11 12 13 14 16 16 16 17 19 20 22 22 22 LCS_GDT G 137 G 137 6 9 17 5 6 6 8 8 9 10 11 12 13 14 16 16 16 17 19 20 22 22 22 LCS_GDT E 138 E 138 6 9 17 5 6 6 8 8 9 10 11 12 12 14 16 16 16 17 19 20 22 22 22 LCS_GDT W 139 W 139 6 9 17 5 6 6 8 8 9 10 11 12 12 12 13 13 14 15 19 20 22 22 22 LCS_GDT R 140 R 140 6 9 15 5 6 6 8 8 9 10 11 12 12 12 13 13 14 15 16 20 22 22 22 LCS_GDT L 141 L 141 6 9 15 5 6 6 8 8 9 10 11 12 12 12 13 13 14 15 16 17 19 20 20 LCS_GDT M 142 M 142 6 9 15 2 6 6 8 8 9 10 11 12 12 12 13 13 14 15 16 17 19 20 20 LCS_GDT V 143 V 143 4 9 15 3 4 5 8 8 9 10 11 12 12 12 13 13 14 15 16 17 19 20 20 LCS_GDT F 144 F 144 4 9 15 3 4 4 6 8 9 10 11 12 12 12 13 13 14 15 16 17 19 20 20 LCS_GDT Q 145 Q 145 4 8 15 3 4 4 6 7 8 10 11 12 12 12 13 13 14 15 16 17 19 20 20 LCS_GDT G 146 G 146 4 8 15 3 3 4 6 7 8 10 11 12 12 12 13 13 14 15 16 17 19 20 20 LCS_GDT D 147 D 147 3 5 15 3 3 4 5 5 5 7 9 12 12 12 13 13 14 15 16 17 19 20 20 LCS_GDT R 148 R 148 3 5 15 3 3 4 5 5 5 7 7 9 11 11 13 13 13 14 15 17 19 20 20 LCS_GDT L 149 L 149 3 5 15 3 3 3 5 5 5 7 7 9 9 10 12 13 13 15 16 17 19 20 20 LCS_GDT L 150 L 150 3 3 15 3 3 3 3 3 4 4 6 7 8 9 11 13 14 15 16 17 19 20 20 LCS_AVERAGE LCS_A: 9.58 ( 3.95 7.17 17.63 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 7 10 14 16 17 18 20 21 25 27 30 35 36 37 40 41 44 46 GDT PERCENT_AT 4.17 5.00 5.83 8.33 11.67 13.33 14.17 15.00 16.67 17.50 20.83 22.50 25.00 29.17 30.00 30.83 33.33 34.17 36.67 38.33 GDT RMS_LOCAL 0.21 0.43 0.79 1.47 1.88 2.02 2.20 2.37 2.81 2.87 4.44 4.58 4.80 5.23 5.35 5.45 5.86 6.09 6.51 6.70 GDT RMS_ALL_AT 38.60 38.56 29.11 27.93 27.89 27.94 27.95 28.16 28.47 28.14 27.13 27.03 27.10 27.27 27.27 27.19 27.36 26.86 26.78 26.79 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA A 23 A 23 27.201 1 0.147 0.147 27.201 0.000 0.000 LGA Q 24 Q 24 28.435 5 0.031 0.031 29.701 0.000 0.000 LGA A 25 A 25 28.082 1 0.023 0.023 28.210 0.000 0.000 LGA E 26 E 26 29.330 5 0.035 0.035 29.330 0.000 0.000 LGA V 27 V 27 27.666 3 0.056 0.056 28.879 0.000 0.000 LGA R 28 R 28 30.430 7 0.033 0.033 30.430 0.000 0.000 LGA I 29 I 29 30.068 4 0.073 0.073 33.694 0.000 0.000 LGA D 30 D 30 35.497 4 0.553 0.553 35.497 0.000 0.000 LGA G 31 G 31 31.491 0 0.204 0.204 33.062 0.000 0.000 LGA P 32 P 32 24.366 3 0.101 0.101 26.975 0.000 0.000 LGA I 33 I 33 19.821 4 0.075 0.075 21.261 0.000 0.000 LGA E 34 E 34 15.625 5 0.534 0.534 17.157 0.000 0.000 LGA Y 35 Y 35 9.259 8 0.175 0.175 11.462 4.643 1.548 LGA G 36 G 36 7.973 0 0.226 0.226 9.532 4.048 4.048 LGA V 37 V 37 11.959 3 0.200 0.200 13.082 0.000 0.000 LGA F 38 F 38 14.852 7 0.026 0.026 16.293 0.000 0.000 LGA E 39 E 39 16.507 5 0.648 0.648 18.102 0.000 0.000 LGA S 40 S 40 21.956 2 0.057 0.057 24.974 0.000 0.000 LGA Q 57 Q 57 18.346 5 0.452 0.452 18.880 0.000 0.000 LGA N 58 N 58 15.573 4 0.637 0.637 16.948 0.000 0.000 LGA I 59 I 59 11.175 4 0.166 0.166 12.949 0.000 0.000 LGA Q 60 Q 60 9.256 5 0.145 0.145 9.945 2.857 1.270 LGA Q 61 Q 61 6.765 5 0.205 0.205 7.505 19.524 8.677 LGA T 62 T 62 3.682 3 0.277 0.277 5.021 51.786 29.592 LGA T 63 T 63 2.187 3 0.508 0.508 2.187 71.190 40.680 LGA E 64 E 64 1.689 5 0.096 0.096 1.856 75.000 33.333 LGA V 65 V 65 1.830 3 0.029 0.029 2.226 72.976 41.701 LGA P 66 P 66 1.471 3 0.063 0.063 1.958 77.143 44.082 LGA A 67 A 67 2.812 1 0.319 0.319 2.812 60.952 48.762 LGA K 68 K 68 2.782 5 0.533 0.533 4.285 54.048 24.021 LGA L 69 L 69 2.301 4 0.095 0.095 3.958 63.571 31.786 LGA G 70 G 70 2.703 0 0.637 0.637 2.840 61.071 61.071 LGA T 71 T 71 2.284 3 0.070 0.070 2.511 60.952 34.830 LGA K 72 K 72 1.162 5 0.028 0.028 1.528 77.143 34.286 LGA F 73 F 73 1.957 7 0.285 0.285 2.519 69.048 25.108 LGA G 74 G 74 4.635 0 0.209 0.209 4.635 42.024 42.024 LGA M 75 M 75 4.023 4 0.106 0.106 4.200 40.238 20.119 LGA R 76 R 76 2.627 7 0.415 0.415 3.402 55.357 20.130 LGA Y 77 Y 77 1.729 8 0.139 0.139 1.888 72.857 24.286 LGA Q 78 Q 78 1.217 5 0.063 0.063 1.540 81.548 36.243 LGA L 79 L 79 1.589 4 0.322 0.322 3.654 67.857 33.929 LGA S 80 S 80 2.341 2 0.198 0.198 5.815 47.619 31.746 LGA G 81 G 81 8.084 0 0.609 0.609 9.768 6.786 6.786 LGA K 82 K 82 13.424 5 0.505 0.505 13.808 0.000 0.000 LGA Q 83 Q 83 12.902 5 0.613 0.613 14.084 0.000 0.000 LGA E 84 E 84 16.093 5 0.018 0.018 16.093 0.000 0.000 LGA G 85 G 85 15.243 0 0.845 0.845 15.357 0.000 0.000 LGA D 86 D 86 14.723 4 0.681 0.681 16.874 0.000 0.000 LGA T 87 T 87 13.100 3 0.111 0.111 13.112 0.000 0.000 LGA P 88 P 88 12.290 3 0.157 0.157 12.875 0.000 0.000 LGA L 89 L 89 9.641 4 0.058 0.058 10.846 0.119 0.060 LGA T 90 T 90 10.303 3 0.643 0.643 10.303 0.595 0.340 LGA L 91 L 91 9.914 4 0.204 0.204 11.320 0.238 0.119 LGA L 92 L 92 8.369 4 0.131 0.131 8.369 5.357 2.679 LGA Y 93 Y 93 8.780 8 0.136 0.136 10.547 2.143 0.714 LGA L 94 L 94 8.180 4 0.025 0.025 8.180 6.667 3.333 LGA T 95 T 95 10.075 3 0.075 0.075 11.254 0.119 0.068 LGA P 96 P 96 10.350 3 0.632 0.632 11.477 0.119 0.068 LGA G 97 G 97 14.065 0 0.197 0.197 14.737 0.000 0.000 LGA V 98 V 98 14.426 3 0.047 0.047 17.480 0.000 0.000 LGA V 99 V 99 20.776 3 0.221 0.221 21.562 0.000 0.000 LGA T 100 T 100 24.353 3 0.670 0.670 26.929 0.000 0.000 LGA P 101 P 101 30.844 3 0.197 0.197 33.842 0.000 0.000 LGA D 102 D 102 33.609 4 0.058 0.058 33.609 0.000 0.000 LGA G 103 G 103 28.565 0 0.671 0.671 30.070 0.000 0.000 LGA Q 104 Q 104 29.100 5 0.204 0.204 29.100 0.000 0.000 LGA R 105 R 105 25.165 7 0.462 0.462 26.806 0.000 0.000 LGA H 106 H 106 22.005 6 0.047 0.047 23.048 0.000 0.000 LGA D 107 D 107 18.090 4 0.148 0.148 19.213 0.000 0.000 LGA K 108 K 108 17.336 5 0.175 0.175 18.927 0.000 0.000 LGA F 109 F 109 17.581 7 0.074 0.074 17.581 0.000 0.000 LGA E 110 E 110 18.315 5 0.064 0.064 19.869 0.000 0.000 LGA V 111 V 111 17.858 3 0.106 0.106 17.991 0.000 0.000 LGA V 112 V 112 15.705 3 0.049 0.049 15.705 0.000 0.000 LGA Q 113 Q 113 14.723 5 0.141 0.141 15.806 0.000 0.000 LGA K 114 K 114 11.251 5 0.078 0.078 11.251 0.000 0.000 LGA L 115 L 115 9.876 4 0.091 0.091 10.445 0.476 0.238 LGA V 116 V 116 6.103 3 0.035 0.035 6.138 20.476 11.701 LGA P 117 P 117 5.161 3 0.631 0.631 5.506 25.000 14.286 LGA G 118 G 118 10.039 0 0.174 0.174 14.544 2.500 2.500 LGA A 119 A 119 20.088 1 0.505 0.505 22.069 0.000 0.000 LGA P 120 P 120 26.024 3 0.673 0.673 26.142 0.000 0.000 LGA T 121 T 121 27.495 3 0.060 0.060 28.763 0.000 0.000 LGA D 122 D 122 29.531 4 0.141 0.141 30.768 0.000 0.000 LGA V 123 V 123 32.659 3 0.048 0.048 33.768 0.000 0.000 LGA M 124 M 124 35.733 4 0.020 0.020 37.069 0.000 0.000 LGA A 125 A 125 39.757 1 0.113 0.113 41.945 0.000 0.000 LGA Y 126 Y 126 44.539 8 0.093 0.093 46.027 0.000 0.000 LGA E 127 E 127 49.720 5 0.044 0.044 52.407 0.000 0.000 LGA F 128 F 128 55.529 7 0.283 0.283 57.357 0.000 0.000 LGA T 129 T 129 59.813 3 0.019 0.019 61.750 0.000 0.000 LGA E 130 E 130 60.572 5 0.201 0.201 61.633 0.000 0.000 LGA P 131 P 131 62.849 3 0.218 0.218 62.852 0.000 0.000 LGA H 132 H 132 61.210 6 0.703 0.703 61.683 0.000 0.000 LGA E 133 E 133 56.749 5 0.645 0.645 58.835 0.000 0.000 LGA V 134 V 134 56.529 3 0.129 0.129 56.821 0.000 0.000 LGA V 135 V 135 55.129 3 0.065 0.065 55.597 0.000 0.000 LGA K 136 K 136 57.899 5 0.057 0.057 57.899 0.000 0.000 LGA G 137 G 137 55.033 0 0.102 0.102 55.913 0.000 0.000 LGA E 138 E 138 52.718 5 0.064 0.064 53.632 0.000 0.000 LGA W 139 W 139 47.702 10 0.042 0.042 49.545 0.000 0.000 LGA R 140 R 140 46.355 7 0.075 0.075 46.633 0.000 0.000 LGA L 141 L 141 41.932 4 0.080 0.080 43.865 0.000 0.000 LGA M 142 M 142 40.179 4 0.042 0.042 40.529 0.000 0.000 LGA V 143 V 143 35.639 3 0.111 0.111 37.604 0.000 0.000 LGA F 144 F 144 35.137 7 0.090 0.090 35.137 0.000 0.000 LGA Q 145 Q 145 33.223 5 0.165 0.165 34.046 0.000 0.000 LGA G 146 G 146 34.767 0 0.233 0.233 38.683 0.000 0.000 LGA D 147 D 147 39.919 4 0.155 0.155 42.137 0.000 0.000 LGA R 148 R 148 38.447 7 0.599 0.599 39.699 0.000 0.000 LGA L 149 L 149 39.331 4 0.635 0.635 39.619 0.000 0.000 LGA L 150 L 150 37.965 4 0.112 0.112 40.438 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 112 448 448 100.00 877 448 51.08 120 SUMMARY(RMSD_GDC): 24.216 24.199 24.199 10.867 5.968 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 112 120 4.0 18 2.37 14.792 13.206 0.729 LGA_LOCAL RMSD: 2.368 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 28.158 Number of assigned atoms: 112 Std_ASGN_ATOMS RMSD: 24.216 Standard rmsd on all 112 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.874121 * X + -0.193063 * Y + -0.445689 * Z + 89.004601 Y_new = -0.452890 * X + 0.007597 * Y + -0.891534 * Z + 157.197296 Z_new = 0.175508 * X + 0.981157 * Y + -0.080796 * Z + -5.084510 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.478029 -0.176422 1.652959 [DEG: -27.3891 -10.1082 94.7076 ] ZXZ: -0.463578 1.651680 0.177007 [DEG: -26.5610 94.6343 10.1417 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0568TS328_1-D1 REMARK 2: T0568-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0568TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 112 120 4.0 18 2.37 13.206 24.22 REMARK ---------------------------------------------------------- MOLECULE T0568TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0568 REMARK MODEL 1 REMARK PARENT 2gsy_E ATOM 81 N ALA 23 29.091 16.730 29.366 1.00 3.00 N ATOM 82 CA ALA 23 29.327 15.615 28.460 1.00 3.00 C ATOM 83 C ALA 23 28.077 15.225 27.711 1.00 3.00 C ATOM 84 O ALA 23 27.065 15.922 27.774 1.00 3.00 O ATOM 85 N GLN 24 28.145 14.093 27.019 1.00 3.00 N ATOM 86 CA GLN 24 27.098 13.711 26.095 1.00 3.00 C ATOM 87 C GLN 24 27.089 12.221 25.839 1.00 3.00 C ATOM 88 O GLN 24 28.142 11.605 25.673 1.00 3.00 O ATOM 89 N ALA 25 25.895 11.645 25.805 1.00 3.00 N ATOM 90 CA ALA 25 25.725 10.298 25.299 1.00 3.00 C ATOM 91 C ALA 25 25.099 10.383 23.924 1.00 3.00 C ATOM 92 O ALA 25 24.296 11.277 23.655 1.00 3.00 O ATOM 93 N GLU 26 25.496 9.464 23.053 1.00 3.00 N ATOM 94 CA GLU 26 24.983 9.400 21.696 1.00 3.00 C ATOM 95 C GLU 26 24.321 8.041 21.511 1.00 3.00 C ATOM 96 O GLU 26 24.928 7.005 21.786 1.00 3.00 O ATOM 97 N VAL 27 23.074 8.056 21.048 1.00 3.00 N ATOM 98 CA VAL 27 22.301 6.835 20.869 1.00 3.00 C ATOM 99 C VAL 27 22.002 6.553 19.404 1.00 3.00 C ATOM 100 O VAL 27 21.642 7.459 18.652 1.00 3.00 O ATOM 101 N ARG 28 22.160 5.292 19.009 1.00 3.00 N ATOM 102 CA ARG 28 21.829 4.836 17.661 1.00 3.00 C ATOM 103 C ARG 28 20.783 3.734 17.779 1.00 3.00 C ATOM 104 O ARG 28 20.767 3.003 18.770 1.00 3.00 O ATOM 105 N ILE 29 19.925 3.602 16.768 1.00 3.00 N ATOM 106 CA ILE 29 18.914 2.537 16.755 1.00 3.00 C ATOM 107 C ILE 29 18.362 2.238 15.354 1.00 3.00 C ATOM 108 O ILE 29 18.384 3.096 14.482 1.00 3.00 O ATOM 109 N ASP 30 17.877 1.023 15.128 1.00 3.00 N ATOM 110 CA ASP 30 17.224 0.699 13.846 1.00 3.00 C ATOM 111 C ASP 30 16.177 1.693 14.336 1.00 3.00 C ATOM 112 O ASP 30 15.808 2.611 13.602 1.00 3.00 O ATOM 113 N GLY 31 15.716 1.503 15.564 1.00 3.00 N ATOM 114 CA GLY 31 14.729 2.395 16.164 1.00 3.00 C ATOM 115 C GLY 31 15.064 2.631 17.646 1.00 3.00 C ATOM 116 O GLY 31 15.248 1.675 18.396 1.00 3.00 O ATOM 117 N PRO 32 15.158 3.888 18.036 1.00 3.00 N ATOM 118 CA PRO 32 15.428 4.250 19.422 1.00 3.00 C ATOM 119 C PRO 32 14.141 4.948 19.861 1.00 3.00 C ATOM 120 O PRO 32 13.750 5.946 19.256 1.00 3.00 O ATOM 121 N ILE 33 13.492 4.413 20.884 1.00 3.00 N ATOM 122 CA ILE 33 12.212 4.955 21.339 1.00 3.00 C ATOM 123 C ILE 33 12.022 5.108 22.847 1.00 3.00 C ATOM 124 O ILE 33 12.502 4.297 23.632 1.00 3.00 O ATOM 125 N GLU 34 11.306 6.171 23.215 1.00 3.00 N ATOM 126 CA GLU 34 10.980 6.444 24.614 1.00 3.00 C ATOM 127 C GLU 34 12.093 6.678 25.611 1.00 3.00 C ATOM 128 O GLU 34 11.990 6.227 26.755 1.00 3.00 O ATOM 129 N TYR 35 13.130 7.398 25.216 1.00 3.00 N ATOM 130 CA TYR 35 14.244 7.667 26.120 1.00 3.00 C ATOM 131 C TYR 35 14.032 8.643 27.249 1.00 3.00 C ATOM 132 O TYR 35 13.817 9.836 27.026 1.00 3.00 O ATOM 133 N GLY 36 14.103 8.116 28.465 1.00 3.00 N ATOM 134 CA GLY 36 14.144 8.922 29.677 1.00 3.00 C ATOM 135 C GLY 36 15.409 8.533 30.425 1.00 3.00 C ATOM 136 O GLY 36 15.882 7.403 30.291 1.00 3.00 O ATOM 137 N VAL 37 15.945 9.454 31.221 1.00 3.00 N ATOM 138 CA VAL 37 17.150 9.178 31.993 1.00 3.00 C ATOM 139 C VAL 37 17.457 10.331 32.952 1.00 3.00 C ATOM 140 O VAL 37 16.740 11.338 32.970 1.00 3.00 O ATOM 141 N PHE 38 18.472 10.137 33.784 1.00 3.00 N ATOM 142 CA PHE 38 18.915 11.164 34.717 1.00 3.00 C ATOM 143 C PHE 38 20.325 11.530 34.281 1.00 3.00 C ATOM 144 O PHE 38 21.171 10.652 34.072 1.00 3.00 O ATOM 145 N GLU 39 20.566 12.821 34.062 1.00 9.00 N ATOM 146 CA GLU 39 21.873 13.305 33.653 1.00 9.00 C ATOM 147 C GLU 39 22.795 13.402 34.860 1.00 9.00 C ATOM 148 O GLU 39 24.013 13.450 34.734 1.00 9.00 O ATOM 149 N SER 40 22.175 13.445 36.030 1.00 3.00 N ATOM 150 CA SER 40 22.883 13.509 37.304 1.00 3.00 C ATOM 151 C SER 40 21.877 13.012 38.325 1.00 3.00 C ATOM 152 O SER 40 20.680 13.294 38.216 1.00 3.00 O ATOM 217 N GLN 57 14.421 16.045 36.811 1.00 9.00 N ATOM 218 CA GLN 57 15.364 16.971 37.418 1.00 9.00 C ATOM 219 C GLN 57 16.653 17.116 36.627 1.00 9.00 C ATOM 220 O GLN 57 16.726 17.923 35.715 1.00 9.00 O ATOM 221 N ASN 58 17.659 16.315 36.988 1.00 9.00 N ATOM 222 CA ASN 58 18.961 16.342 36.339 1.00 9.00 C ATOM 223 C ASN 58 18.994 15.882 34.888 1.00 9.00 C ATOM 224 O ASN 58 19.663 16.508 34.052 1.00 9.00 O ATOM 225 N ILE 59 18.293 14.808 34.563 1.00 3.00 N ATOM 226 CA ILE 59 18.293 14.312 33.192 1.00 3.00 C ATOM 227 C ILE 59 17.010 14.677 32.444 1.00 3.00 C ATOM 228 O ILE 59 16.041 15.119 33.043 1.00 3.00 O ATOM 229 N GLN 60 17.033 14.486 31.132 1.00 3.00 N ATOM 230 CA GLN 60 15.867 14.810 30.312 1.00 3.00 C ATOM 231 C GLN 60 14.907 13.636 30.213 1.00 3.00 C ATOM 232 O GLN 60 15.290 12.481 30.406 1.00 3.00 O ATOM 233 N GLN 61 13.654 13.941 29.879 1.00 3.00 N ATOM 234 CA GLN 61 12.644 12.906 29.728 1.00 3.00 C ATOM 235 C GLN 61 11.966 12.949 28.390 1.00 3.00 C ATOM 236 O GLN 61 12.146 13.910 27.645 1.00 3.00 O ATOM 237 N THR 62 11.198 11.909 28.072 1.00 3.00 N ATOM 238 CA THR 62 10.499 11.807 26.787 1.00 3.00 C ATOM 239 C THR 62 11.316 12.398 25.627 1.00 3.00 C ATOM 240 O THR 62 11.308 13.610 25.387 1.00 3.00 O ATOM 241 N THR 63 12.025 11.526 24.921 1.00 3.00 N ATOM 242 CA THR 63 13.051 11.930 23.969 1.00 3.00 C ATOM 243 C THR 63 13.114 10.906 22.841 1.00 3.00 C ATOM 244 O THR 63 13.742 9.854 22.984 1.00 3.00 O ATOM 245 N GLU 64 12.449 11.217 21.732 1.00 3.00 N ATOM 246 CA GLU 64 12.359 10.305 20.598 1.00 3.00 C ATOM 247 C GLU 64 13.688 10.047 19.922 1.00 3.00 C ATOM 248 O GLU 64 14.498 10.960 19.758 1.00 3.00 O ATOM 249 N VAL 65 13.916 8.793 19.541 1.00 3.00 N ATOM 250 CA VAL 65 15.119 8.413 18.816 1.00 3.00 C ATOM 251 C VAL 65 14.805 8.218 17.344 1.00 3.00 C ATOM 252 O VAL 65 13.856 7.517 16.993 1.00 3.00 O ATOM 253 N PRO 66 15.607 8.847 16.490 1.00 3.00 N ATOM 254 CA PRO 66 15.495 8.676 15.047 1.00 3.00 C ATOM 255 C PRO 66 16.409 7.545 14.581 1.00 3.00 C ATOM 256 O PRO 66 17.505 7.350 15.107 1.00 3.00 O ATOM 257 N ALA 67 15.925 6.805 13.594 1.00 3.00 N ATOM 258 CA ALA 67 16.636 5.696 12.988 1.00 3.00 C ATOM 259 C ALA 67 17.810 6.199 12.133 1.00 3.00 C ATOM 260 O ALA 67 17.697 7.223 11.459 1.00 3.00 O ATOM 261 N LYS 68 18.936 5.488 12.193 1.00 3.00 N ATOM 262 CA LYS 68 20.098 5.763 11.340 1.00 3.00 C ATOM 263 C LYS 68 20.800 7.098 11.527 1.00 3.00 C ATOM 264 O LYS 68 21.462 7.587 10.610 1.00 3.00 O ATOM 265 N LEU 69 20.663 7.685 12.712 1.00 3.00 N ATOM 266 CA LEU 69 21.312 8.953 13.039 1.00 3.00 C ATOM 267 C LEU 69 21.813 8.909 14.471 1.00 3.00 C ATOM 268 O LEU 69 21.307 8.135 15.287 1.00 3.00 O ATOM 269 N GLY 70 22.813 9.738 14.766 1.00 3.00 N ATOM 270 CA GLY 70 23.193 10.022 16.141 1.00 3.00 C ATOM 271 C GLY 70 22.041 10.756 16.820 1.00 3.00 C ATOM 272 O GLY 70 21.475 11.694 16.256 1.00 3.00 O ATOM 273 N THR 71 21.677 10.292 18.013 1.00 3.00 N ATOM 274 CA THR 71 20.709 10.973 18.864 1.00 3.00 C ATOM 275 C THR 71 21.418 11.462 20.109 1.00 3.00 C ATOM 276 O THR 71 21.868 10.663 20.935 1.00 3.00 O ATOM 277 N LYS 72 21.534 12.776 20.235 1.00 3.00 N ATOM 278 CA LYS 72 22.366 13.361 21.279 1.00 3.00 C ATOM 279 C LYS 72 21.612 13.514 22.583 1.00 3.00 C ATOM 280 O LYS 72 20.443 13.897 22.599 1.00 3.00 O ATOM 281 N PHE 73 22.294 13.209 23.678 1.00 3.00 N ATOM 282 CA PHE 73 21.761 13.439 25.006 1.00 3.00 C ATOM 283 C PHE 73 22.803 14.197 25.812 1.00 3.00 C ATOM 284 O PHE 73 23.673 13.590 26.438 1.00 3.00 O ATOM 285 N GLY 74 22.726 15.535 25.792 1.00 3.00 N ATOM 286 CA GLY 74 23.725 16.346 26.466 1.00 3.00 C ATOM 287 C GLY 74 23.511 16.348 27.972 1.00 3.00 C ATOM 288 O GLY 74 22.403 16.100 28.448 1.00 3.00 O ATOM 289 N MET 75 24.580 16.622 28.707 1.00 3.00 N ATOM 290 CA MET 75 24.507 16.771 30.146 1.00 3.00 C ATOM 291 C MET 75 24.912 18.192 30.505 1.00 3.00 C ATOM 292 O MET 75 26.041 18.614 30.250 1.00 3.00 O ATOM 293 N ARG 76 23.970 18.936 31.067 1.00 3.00 N ATOM 294 CA ARG 76 24.203 20.323 31.443 1.00 3.00 C ATOM 295 C ARG 76 23.755 20.578 32.875 1.00 3.00 C ATOM 296 O ARG 76 22.956 21.480 33.126 1.00 3.00 O ATOM 297 N TYR 77 24.261 19.784 33.813 1.00 3.00 N ATOM 298 CA TYR 77 23.787 19.855 35.187 1.00 3.00 C ATOM 299 C TYR 77 24.661 20.741 36.045 1.00 3.00 C ATOM 300 O TYR 77 25.884 20.625 36.034 1.00 3.00 O ATOM 301 N GLN 78 24.017 21.622 36.795 1.00 3.00 N ATOM 302 CA GLN 78 24.692 22.370 37.838 1.00 3.00 C ATOM 303 C GLN 78 23.975 22.082 39.152 1.00 3.00 C ATOM 304 O GLN 78 22.768 22.286 39.264 1.00 3.00 O ATOM 305 N LEU 79 24.714 21.571 40.130 1.00 3.00 N ATOM 306 CA LEU 79 24.136 21.265 41.454 1.00 3.00 C ATOM 307 C LEU 79 24.353 21.383 42.946 1.00 3.00 C ATOM 308 O LEU 79 24.998 20.525 43.559 1.00 3.00 O ATOM 309 N SER 80 23.833 22.453 43.533 1.00 3.00 N ATOM 310 CA SER 80 23.935 22.660 44.963 1.00 3.00 C ATOM 311 C SER 80 22.544 22.922 45.484 1.00 3.00 C ATOM 312 O SER 80 21.967 23.985 45.240 1.00 3.00 O ATOM 313 N GLY 81 21.995 21.942 46.186 1.00 3.00 N ATOM 314 CA GLY 81 20.645 22.070 46.723 1.00 3.00 C ATOM 315 C GLY 81 20.691 22.645 48.133 1.00 3.00 C ATOM 316 O GLY 81 21.408 22.141 48.995 1.00 3.00 O ATOM 317 N LYS 82 19.923 23.709 48.347 1.00 9.00 N ATOM 318 CA LYS 82 19.843 24.388 49.641 1.00 9.00 C ATOM 319 C LYS 82 21.221 24.679 50.223 1.00 9.00 C ATOM 320 O LYS 82 21.372 24.857 51.429 1.00 9.00 O ATOM 321 N GLN 83 22.224 24.748 49.356 1.00 3.00 N ATOM 322 CA GLN 83 23.590 25.018 49.777 1.00 3.00 C ATOM 323 C GLN 83 24.118 23.947 50.717 1.00 3.00 C ATOM 324 O GLN 83 25.001 24.225 51.538 1.00 3.00 O ATOM 325 N GLU 84 23.594 22.733 50.611 1.00 3.00 N ATOM 326 CA GLU 84 24.045 21.646 51.468 1.00 3.00 C ATOM 327 C GLU 84 24.243 20.331 50.714 1.00 3.00 C ATOM 328 O GLU 84 25.143 19.549 51.037 1.00 3.00 O ATOM 329 N GLY 85 23.409 20.077 49.717 1.00 3.00 N ATOM 330 CA GLY 85 23.510 18.839 48.950 1.00 3.00 C ATOM 331 C GLY 85 23.317 18.722 50.484 1.00 3.00 C ATOM 332 O GLY 85 24.071 19.306 51.266 1.00 3.00 O ATOM 333 N ASP 86 22.299 17.962 50.881 1.00 3.00 N ATOM 334 CA ASP 86 21.889 17.880 52.283 1.00 3.00 C ATOM 335 C ASP 86 22.792 16.980 53.131 1.00 3.00 C ATOM 336 O ASP 86 22.750 17.039 54.360 1.00 3.00 O ATOM 337 N THR 87 23.592 16.148 52.464 1.00 3.00 N ATOM 338 CA THR 87 24.609 15.308 53.108 1.00 3.00 C ATOM 339 C THR 87 25.683 14.957 52.080 1.00 3.00 C ATOM 340 O THR 87 25.413 14.994 50.882 1.00 3.00 O ATOM 341 N PRO 88 26.902 14.604 52.536 1.00 3.00 N ATOM 342 CA PRO 88 27.972 14.275 51.581 1.00 3.00 C ATOM 343 C PRO 88 27.541 13.294 50.494 1.00 3.00 C ATOM 344 O PRO 88 26.914 12.270 50.791 1.00 3.00 O ATOM 345 N LEU 89 27.868 13.633 49.248 1.00 3.00 N ATOM 346 CA LEU 89 27.635 12.772 48.091 1.00 3.00 C ATOM 347 C LEU 89 28.736 11.739 47.998 1.00 3.00 C ATOM 348 O LEU 89 29.922 12.067 48.096 1.00 3.00 O ATOM 349 N THR 90 28.333 10.497 47.763 1.00 3.00 N ATOM 350 CA THR 90 29.241 9.361 47.796 1.00 3.00 C ATOM 351 C THR 90 29.317 8.603 46.469 1.00 3.00 C ATOM 352 O THR 90 30.322 7.950 46.182 1.00 3.00 O ATOM 353 N LEU 91 28.269 8.710 45.659 1.00 3.00 N ATOM 354 CA LEU 91 28.279 8.113 44.328 1.00 3.00 C ATOM 355 C LEU 91 27.317 8.822 43.388 1.00 3.00 C ATOM 356 O LEU 91 26.447 9.574 43.818 1.00 3.00 O ATOM 357 N LEU 92 27.494 8.577 42.100 1.00 3.00 N ATOM 358 CA LEU 92 26.607 9.102 41.078 1.00 3.00 C ATOM 359 C LEU 92 26.156 7.928 40.228 1.00 3.00 C ATOM 360 O LEU 92 26.959 7.040 39.914 1.00 3.00 O ATOM 361 N TYR 93 24.876 7.899 39.877 1.00 3.00 N ATOM 362 CA TYR 93 24.407 6.905 38.926 1.00 3.00 C ATOM 363 C TYR 93 23.449 7.489 37.906 1.00 3.00 C ATOM 364 O TYR 93 22.795 8.503 38.150 1.00 3.00 O ATOM 365 N LEU 94 23.397 6.841 36.752 1.00 3.00 N ATOM 366 CA LEU 94 22.530 7.254 35.671 1.00 3.00 C ATOM 367 C LEU 94 21.603 6.117 35.294 1.00 3.00 C ATOM 368 O LEU 94 22.050 5.028 34.949 1.00 3.00 O ATOM 369 N THR 95 20.306 6.380 35.371 1.00 3.00 N ATOM 370 CA THR 95 19.304 5.430 34.925 1.00 3.00 C ATOM 371 C THR 95 18.742 5.879 33.594 1.00 3.00 C ATOM 372 O THR 95 18.635 7.076 33.334 1.00 3.00 O ATOM 373 N PRO 96 18.403 4.912 32.748 1.00 3.00 N ATOM 374 CA PRO 96 17.778 5.194 31.464 1.00 3.00 C ATOM 375 C PRO 96 16.511 4.371 31.325 1.00 3.00 C ATOM 376 O PRO 96 16.522 3.161 31.544 1.00 3.00 O ATOM 377 N GLY 97 15.419 5.040 30.973 1.00 3.00 N ATOM 378 CA GLY 97 14.159 4.375 30.693 1.00 3.00 C ATOM 379 C GLY 97 13.984 4.321 29.183 1.00 3.00 C ATOM 380 O GLY 97 14.141 5.333 28.497 1.00 3.00 O ATOM 381 N VAL 98 13.691 3.125 28.676 1.00 3.00 N ATOM 382 CA VAL 98 13.360 2.923 27.268 1.00 3.00 C ATOM 383 C VAL 98 11.904 2.476 27.158 1.00 3.00 C ATOM 384 O VAL 98 11.556 1.367 27.565 1.00 3.00 O ATOM 385 N VAL 99 11.059 3.356 26.625 1.00 3.00 N ATOM 386 CA VAL 99 9.644 3.061 26.406 1.00 3.00 C ATOM 387 C VAL 99 9.332 3.127 24.911 1.00 3.00 C ATOM 388 O VAL 99 10.171 3.564 24.120 1.00 3.00 O ATOM 389 N THR 100 8.135 2.691 24.526 1.00 3.00 N ATOM 390 CA THR 100 7.788 2.599 23.110 1.00 3.00 C ATOM 391 C THR 100 6.443 3.234 22.755 1.00 3.00 C ATOM 392 O THR 100 6.247 3.673 21.618 1.00 3.00 O ATOM 393 N PRO 101 5.524 3.265 23.720 1.00 3.00 N ATOM 394 CA PRO 101 4.173 3.816 23.532 1.00 3.00 C ATOM 395 C PRO 101 3.223 2.868 22.797 1.00 3.00 C ATOM 396 O PRO 101 2.192 2.477 23.345 1.00 3.00 O ATOM 397 N ASP 102 3.566 2.502 21.565 1.00 3.00 N ATOM 398 CA ASP 102 2.683 1.673 20.742 1.00 3.00 C ATOM 399 C ASP 102 3.027 0.195 20.736 1.00 3.00 C ATOM 400 O ASP 102 2.442 -0.576 19.968 1.00 3.00 O ATOM 401 N GLY 103 3.968 -0.197 21.594 1.00 3.00 N ATOM 402 CA GLY 103 4.451 -1.577 21.658 1.00 3.00 C ATOM 403 C GLY 103 3.382 -2.609 21.982 1.00 3.00 C ATOM 404 O GLY 103 2.391 -2.301 22.650 1.00 3.00 O ATOM 405 N GLN 104 3.590 -3.837 21.511 1.00 3.00 N ATOM 406 CA GLN 104 2.649 -4.932 21.747 1.00 3.00 C ATOM 407 C GLN 104 3.346 -6.183 22.295 1.00 3.00 C ATOM 408 O GLN 104 4.493 -6.110 22.744 1.00 3.00 O ATOM 409 N ARG 105 2.630 -7.311 22.255 1.00 3.00 N ATOM 410 CA ARG 105 3.083 -8.610 22.782 1.00 3.00 C ATOM 411 C ARG 105 4.560 -8.666 23.195 1.00 3.00 C ATOM 412 O ARG 105 4.890 -8.384 24.350 1.00 3.00 O ATOM 413 N HIS 106 5.434 -9.020 22.255 1.00 3.00 N ATOM 414 CA HIS 106 6.872 -9.103 22.518 1.00 3.00 C ATOM 415 C HIS 106 7.685 -8.522 21.379 1.00 3.00 C ATOM 416 O HIS 106 8.023 -9.229 20.428 1.00 3.00 O ATOM 417 N ASP 107 8.014 -7.238 21.487 1.00 3.00 N ATOM 418 CA ASP 107 8.478 -6.470 20.331 1.00 3.00 C ATOM 419 C ASP 107 9.988 -6.422 20.088 1.00 3.00 C ATOM 420 O ASP 107 10.427 -6.579 18.946 1.00 3.00 O ATOM 421 N LYS 108 10.761 -6.204 21.151 1.00 3.00 N ATOM 422 CA LYS 108 12.217 -5.991 21.068 1.00 3.00 C ATOM 423 C LYS 108 12.566 -4.519 20.856 1.00 3.00 C ATOM 424 O LYS 108 12.251 -3.932 19.816 1.00 3.00 O ATOM 425 N PHE 109 13.210 -3.935 21.862 1.00 3.00 N ATOM 426 CA PHE 109 13.688 -2.558 21.810 1.00 3.00 C ATOM 427 C PHE 109 15.196 -2.582 21.965 1.00 3.00 C ATOM 428 O PHE 109 15.716 -3.153 22.919 1.00 3.00 O ATOM 429 N GLU 110 15.898 -1.961 21.028 1.00 3.00 N ATOM 430 CA GLU 110 17.348 -1.954 21.063 1.00 3.00 C ATOM 431 C GLU 110 17.923 -0.592 20.735 1.00 3.00 C ATOM 432 O GLU 110 17.406 0.127 19.882 1.00 3.00 O ATOM 433 N VAL 111 18.991 -0.239 21.437 1.00 3.00 N ATOM 434 CA VAL 111 19.793 0.918 21.070 1.00 3.00 C ATOM 435 C VAL 111 21.260 0.729 21.412 1.00 3.00 C ATOM 436 O VAL 111 21.619 -0.075 22.277 1.00 3.00 O ATOM 437 N VAL 112 24.731 2.873 22.570 1.00 3.00 N ATOM 438 CA VAL 112 25.105 4.115 23.247 1.00 3.00 C ATOM 439 C VAL 112 26.612 4.310 23.332 1.00 3.00 C ATOM 440 O VAL 112 27.364 3.352 23.518 1.00 3.00 O ATOM 441 N GLN 113 27.038 5.564 23.210 1.00 3.00 N ATOM 442 CA GLN 113 28.450 5.927 23.225 1.00 3.00 C ATOM 443 C GLN 113 28.590 7.279 23.891 1.00 3.00 C ATOM 444 O GLN 113 27.743 8.148 23.709 1.00 3.00 O ATOM 445 N LYS 114 31.165 9.864 26.995 1.00 3.00 N ATOM 446 CA LYS 114 31.652 10.047 28.356 1.00 3.00 C ATOM 447 C LYS 114 31.145 11.327 28.994 1.00 3.00 C ATOM 448 O LYS 114 30.803 12.291 28.304 1.00 3.00 O ATOM 449 N LEU 115 31.095 11.305 30.323 1.00 3.00 N ATOM 450 CA LEU 115 30.635 12.426 31.121 1.00 3.00 C ATOM 451 C LEU 115 31.783 12.932 31.964 1.00 3.00 C ATOM 452 O LEU 115 32.715 12.188 32.269 1.00 3.00 O ATOM 453 N VAL 116 32.342 14.923 35.654 1.00 3.00 N ATOM 454 CA VAL 116 31.783 15.460 36.879 1.00 3.00 C ATOM 455 C VAL 116 32.836 16.364 37.494 1.00 3.00 C ATOM 456 O VAL 116 33.905 15.900 37.906 1.00 3.00 O ATOM 457 N PRO 117 32.553 17.661 37.521 1.00 3.00 N ATOM 458 CA PRO 117 33.480 18.625 38.091 1.00 3.00 C ATOM 459 C PRO 117 32.952 19.006 39.452 1.00 3.00 C ATOM 460 O PRO 117 31.863 19.576 39.551 1.00 3.00 O ATOM 461 N GLY 118 37.142 20.929 44.564 1.00 3.00 N ATOM 462 CA GLY 118 37.231 19.583 45.130 1.00 3.00 C ATOM 463 C GLY 118 38.628 19.071 45.440 1.00 3.00 C ATOM 464 O GLY 118 38.820 18.303 46.383 1.00 3.00 O ATOM 465 N ALA 119 39.617 15.922 50.910 1.00 3.00 N ATOM 466 CA ALA 119 40.680 14.946 50.897 1.00 3.00 C ATOM 467 C ALA 119 40.871 14.237 52.220 1.00 3.00 C ATOM 468 O ALA 119 40.414 13.102 52.356 1.00 3.00 O ATOM 469 N PRO 120 41.529 14.878 53.209 1.00 3.00 N ATOM 470 CA PRO 120 41.733 13.986 54.344 1.00 3.00 C ATOM 471 C PRO 120 40.401 13.822 55.057 1.00 3.00 C ATOM 472 O PRO 120 39.623 14.770 55.146 1.00 3.00 O ATOM 473 N THR 121 40.117 12.608 55.500 1.00 3.00 N ATOM 474 CA THR 121 38.905 12.349 56.250 1.00 3.00 C ATOM 475 C THR 121 39.303 11.667 57.544 1.00 3.00 C ATOM 476 O THR 121 40.146 10.775 57.541 1.00 3.00 O ATOM 477 N ASP 122 38.722 12.108 58.650 1.00 3.00 N ATOM 478 CA ASP 122 38.909 11.424 59.916 1.00 3.00 C ATOM 479 C ASP 122 37.594 10.799 60.341 1.00 3.00 C ATOM 480 O ASP 122 36.589 11.488 60.497 1.00 3.00 O ATOM 481 N VAL 123 37.612 9.486 60.516 1.00 3.00 N ATOM 482 CA VAL 123 36.436 8.761 60.937 1.00 3.00 C ATOM 483 C VAL 123 36.535 8.435 62.408 1.00 3.00 C ATOM 484 O VAL 123 37.550 7.911 62.868 1.00 3.00 O ATOM 485 N MET 124 35.479 8.761 63.143 1.00 3.00 N ATOM 486 CA MET 124 35.371 8.393 64.539 1.00 3.00 C ATOM 487 C MET 124 34.153 7.494 64.667 1.00 3.00 C ATOM 488 O MET 124 33.019 7.947 64.523 1.00 3.00 O ATOM 489 N ALA 125 34.404 6.212 64.913 1.00 3.00 N ATOM 490 CA ALA 125 33.356 5.232 65.031 1.00 3.00 C ATOM 491 C ALA 125 32.934 5.007 66.479 1.00 3.00 C ATOM 492 O ALA 125 33.766 4.753 67.350 1.00 3.00 O ATOM 493 N TYR 126 31.629 5.084 66.759 1.00 3.00 N ATOM 494 CA TYR 126 31.179 4.914 68.134 1.00 3.00 C ATOM 495 C TYR 126 29.690 4.584 68.268 1.00 3.00 C ATOM 496 O TYR 126 28.887 4.867 67.380 1.00 3.00 O ATOM 497 N GLU 127 29.345 3.970 69.399 1.00 3.00 N ATOM 498 CA GLU 127 27.971 3.619 69.726 1.00 3.00 C ATOM 499 C GLU 127 27.804 3.642 71.247 1.00 3.00 C ATOM 500 O GLU 127 28.690 3.185 71.970 1.00 3.00 O ATOM 501 N PHE 128 26.693 4.204 71.715 1.00 3.00 N ATOM 502 CA PHE 128 26.421 4.276 73.152 1.00 3.00 C ATOM 503 C PHE 128 25.487 3.133 73.557 1.00 3.00 C ATOM 504 O PHE 128 24.856 2.520 72.709 1.00 3.00 O ATOM 505 N THR 129 25.429 2.850 74.856 1.00 3.00 N ATOM 506 CA THR 129 24.578 1.770 75.338 1.00 3.00 C ATOM 507 C THR 129 23.111 1.954 74.965 1.00 3.00 C ATOM 508 O THR 129 22.383 0.973 74.846 1.00 3.00 O ATOM 509 N GLU 130 22.687 3.199 74.777 1.00 3.00 N ATOM 510 CA GLU 130 21.292 3.479 74.434 1.00 3.00 C ATOM 511 C GLU 130 20.696 4.610 75.246 1.00 3.00 C ATOM 512 O GLU 130 20.449 4.453 76.442 1.00 3.00 O ATOM 513 N PRO 131 20.484 5.752 74.603 1.00 3.00 N ATOM 514 CA PRO 131 19.905 6.908 75.280 1.00 3.00 C ATOM 515 C PRO 131 20.937 7.808 75.935 1.00 3.00 C ATOM 516 O PRO 131 20.584 8.770 76.621 1.00 3.00 O ATOM 517 N HIS 132 22.212 7.486 75.738 1.00 3.00 N ATOM 518 CA HIS 132 23.286 8.387 76.122 1.00 3.00 C ATOM 519 C HIS 132 23.599 9.307 74.949 1.00 3.00 C ATOM 520 O HIS 132 23.169 9.060 73.820 1.00 3.00 O ATOM 521 N GLU 133 24.341 10.374 75.229 1.00 3.00 N ATOM 522 CA GLU 133 24.598 11.427 74.258 1.00 3.00 C ATOM 523 C GLU 133 26.095 11.564 73.998 1.00 3.00 C ATOM 524 O GLU 133 26.872 11.759 74.931 1.00 3.00 O ATOM 525 N VAL 134 26.483 11.446 72.729 1.00 3.00 N ATOM 526 CA VAL 134 27.874 11.593 72.308 1.00 3.00 C ATOM 527 C VAL 134 28.143 13.066 72.027 1.00 3.00 C ATOM 528 O VAL 134 27.531 13.672 71.142 1.00 3.00 O ATOM 529 N VAL 135 30.308 16.345 71.037 1.00 3.00 N ATOM 530 CA VAL 135 31.362 16.832 70.174 1.00 3.00 C ATOM 531 C VAL 135 31.628 18.285 70.530 1.00 3.00 C ATOM 532 O VAL 135 30.702 19.082 70.650 1.00 3.00 O ATOM 533 N LYS 136 32.895 18.613 70.729 1.00 3.00 N ATOM 534 CA LYS 136 33.305 19.979 70.995 1.00 3.00 C ATOM 535 C LYS 136 34.592 20.208 70.234 1.00 3.00 C ATOM 536 O LYS 136 35.511 19.395 70.298 1.00 3.00 O ATOM 537 N GLY 137 34.655 21.302 69.492 1.00 3.00 N ATOM 538 CA GLY 137 35.837 21.591 68.707 1.00 3.00 C ATOM 539 C GLY 137 36.123 23.066 68.575 1.00 3.00 C ATOM 540 O GLY 137 35.283 23.903 68.897 1.00 3.00 O ATOM 541 N GLU 138 37.329 23.378 68.121 1.00 3.00 N ATOM 542 CA GLU 138 37.679 24.740 67.763 1.00 3.00 C ATOM 543 C GLU 138 38.339 24.700 66.393 1.00 3.00 C ATOM 544 O GLU 138 39.206 23.868 66.137 1.00 3.00 O ATOM 545 N TRP 139 37.903 25.586 65.510 1.00 3.00 N ATOM 546 CA TRP 139 38.492 25.717 64.189 1.00 3.00 C ATOM 547 C TRP 139 39.059 27.107 64.070 1.00 3.00 C ATOM 548 O TRP 139 38.416 28.075 64.463 1.00 3.00 O ATOM 549 N ARG 140 40.266 27.203 63.530 1.00 3.00 N ATOM 550 CA ARG 140 40.947 28.484 63.393 1.00 3.00 C ATOM 551 C ARG 140 41.166 28.843 61.937 1.00 3.00 C ATOM 552 O ARG 140 41.570 27.999 61.133 1.00 3.00 O ATOM 553 N LEU 141 40.902 30.101 61.599 1.00 3.00 N ATOM 554 CA LEU 141 40.912 30.528 60.209 1.00 3.00 C ATOM 555 C LEU 141 41.649 31.826 59.964 1.00 3.00 C ATOM 556 O LEU 141 41.687 32.711 60.821 1.00 3.00 O ATOM 557 N MET 142 42.229 31.926 58.774 1.00 3.00 N ATOM 558 CA MET 142 42.575 33.208 58.188 1.00 3.00 C ATOM 559 C MET 142 41.388 33.587 57.310 1.00 3.00 C ATOM 560 O MET 142 40.925 32.782 56.505 1.00 3.00 O ATOM 561 N VAL 143 40.879 34.799 57.481 1.00 3.00 N ATOM 562 CA VAL 143 39.647 35.194 56.813 1.00 3.00 C ATOM 563 C VAL 143 39.736 36.564 56.177 1.00 3.00 C ATOM 564 O VAL 143 40.406 37.454 56.702 1.00 3.00 O ATOM 565 N PHE 144 39.055 36.717 55.043 1.00 3.00 N ATOM 566 CA PHE 144 38.844 38.026 54.428 1.00 3.00 C ATOM 567 C PHE 144 37.354 38.341 54.520 1.00 3.00 C ATOM 568 O PHE 144 36.527 37.555 54.050 1.00 3.00 O ATOM 569 N GLN 145 37.005 39.474 55.154 1.00 3.00 N ATOM 570 CA GLN 145 35.602 39.833 55.370 1.00 3.00 C ATOM 571 C GLN 145 34.869 40.124 54.071 1.00 3.00 C ATOM 572 O GLN 145 35.493 40.541 53.091 1.00 3.00 O ATOM 573 N GLY 146 33.555 39.904 54.071 1.00 3.00 N ATOM 574 CA GLY 146 32.718 40.301 52.946 1.00 3.00 C ATOM 575 C GLY 146 32.619 41.831 52.897 1.00 3.00 C ATOM 576 O GLY 146 33.001 42.497 53.860 1.00 3.00 O ATOM 577 N ASP 147 32.134 42.397 51.774 1.00 3.00 N ATOM 578 CA ASP 147 32.129 43.853 51.635 1.00 3.00 C ATOM 579 C ASP 147 31.485 44.633 52.785 1.00 3.00 C ATOM 580 O ASP 147 31.963 45.718 53.118 1.00 3.00 O ATOM 581 N ARG 148 30.421 44.102 53.386 1.00 3.00 N ATOM 582 CA ARG 148 29.740 44.838 54.452 1.00 3.00 C ATOM 583 C ARG 148 30.555 44.833 55.741 1.00 3.00 C ATOM 584 O ARG 148 30.652 45.850 56.427 1.00 3.00 O ATOM 585 N LEU 149 31.160 43.692 56.046 1.00 3.00 N ATOM 586 CA LEU 149 31.987 43.565 57.233 1.00 3.00 C ATOM 587 C LEU 149 33.334 44.256 57.073 1.00 3.00 C ATOM 588 O LEU 149 33.882 44.779 58.043 1.00 3.00 O ATOM 589 N LEU 150 33.850 44.264 55.844 1.00 3.00 N ATOM 590 CA LEU 150 35.124 44.911 55.522 1.00 3.00 C ATOM 591 C LEU 150 35.159 46.385 55.920 1.00 3.00 C ATOM 592 O LEU 150 36.230 46.971 56.040 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 448 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 74.09 42.6 190 80.9 235 ARMSMC SECONDARY STRUCTURE . . 50.27 56.2 80 69.6 115 ARMSMC SURFACE . . . . . . . . 76.92 39.2 130 83.3 156 ARMSMC BURIED . . . . . . . . 67.57 50.0 60 75.9 79 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 92 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 82 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 51 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 60 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 60 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 51 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 34 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 38 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 15 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 12 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 3 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 2 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 24.22 (Number of atoms: 112) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 24.22 112 93.3 120 CRMSCA CRN = ALL/NP . . . . . 0.2162 CRMSCA SECONDARY STRUCTURE . . 23.69 52 88.1 59 CRMSCA SURFACE . . . . . . . . 25.27 74 93.7 79 CRMSCA BURIED . . . . . . . . 22.03 38 92.7 41 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 24.20 448 76.1 589 CRMSMC SECONDARY STRUCTURE . . 23.72 208 71.5 291 CRMSMC SURFACE . . . . . . . . 25.11 296 76.5 387 CRMSMC BURIED . . . . . . . . 22.32 152 75.2 202 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 464 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 390 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 264 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 292 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 172 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 24.20 448 47.5 944 CRMSALL SECONDARY STRUCTURE . . 23.72 208 41.6 500 CRMSALL SURFACE . . . . . . . . 25.11 296 48.7 608 CRMSALL BURIED . . . . . . . . 22.32 152 45.2 336 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.593 0.682 0.341 112 93.3 120 ERRCA SECONDARY STRUCTURE . . 17.948 0.672 0.336 52 88.1 59 ERRCA SURFACE . . . . . . . . 19.906 0.707 0.353 74 93.7 79 ERRCA BURIED . . . . . . . . 16.037 0.635 0.318 38 92.7 41 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.579 0.682 0.341 448 76.1 589 ERRMC SECONDARY STRUCTURE . . 17.972 0.672 0.336 208 71.5 291 ERRMC SURFACE . . . . . . . . 19.745 0.704 0.352 296 76.5 387 ERRMC BURIED . . . . . . . . 16.310 0.640 0.320 152 75.2 202 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 464 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 390 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 264 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 292 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 172 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.579 0.682 0.341 448 47.5 944 ERRALL SECONDARY STRUCTURE . . 17.972 0.672 0.336 208 41.6 500 ERRALL SURFACE . . . . . . . . 19.745 0.704 0.352 296 48.7 608 ERRALL BURIED . . . . . . . . 16.310 0.640 0.320 152 45.2 336 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 2 23 112 120 DISTCA CA (P) 0.00 0.00 0.00 1.67 19.17 120 DISTCA CA (RMS) 0.00 0.00 0.00 4.48 7.97 DISTCA ALL (N) 0 0 0 5 87 448 944 DISTALL ALL (P) 0.00 0.00 0.00 0.53 9.22 944 DISTALL ALL (RMS) 0.00 0.00 0.00 4.64 7.72 DISTALL END of the results output