####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 80 ( 320), selected 61 , name T0564TS328_1-D1 # Molecule2: number of CA atoms 61 ( 989), selected 61 , name T0564-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0564TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 39 - 61 4.98 15.91 LONGEST_CONTINUOUS_SEGMENT: 23 40 - 62 4.96 15.73 LCS_AVERAGE: 32.46 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 37 - 46 1.26 15.74 LCS_AVERAGE: 12.34 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 37 - 45 0.95 15.59 LCS_AVERAGE: 7.93 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 61 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 4 L 4 5 7 14 3 4 5 6 8 8 10 12 14 15 17 20 22 23 24 25 31 33 34 34 LCS_GDT Q 5 Q 5 5 7 22 3 4 5 5 8 8 10 12 14 15 17 20 22 24 28 30 31 33 34 35 LCS_GDT Q 6 Q 6 5 7 22 3 4 5 6 8 8 10 12 14 15 18 21 25 26 28 32 33 34 35 36 LCS_GDT K 7 K 7 5 8 22 3 4 5 7 8 8 13 14 15 16 20 25 26 27 29 32 33 34 35 36 LCS_GDT Q 8 Q 8 5 8 22 3 4 5 7 8 13 13 15 16 18 20 25 26 27 29 32 33 34 35 36 LCS_GDT V 9 V 9 4 8 22 3 4 5 9 11 13 13 15 16 18 20 25 26 27 29 32 33 34 35 36 LCS_GDT V 10 V 10 4 8 22 3 4 5 7 8 12 13 15 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT V 11 V 11 4 8 22 3 4 5 7 10 13 13 15 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT S 12 S 12 4 8 22 3 4 5 7 7 8 10 15 17 18 21 22 23 27 29 32 33 34 35 36 LCS_GDT N 13 N 13 4 8 22 3 4 5 7 7 8 11 15 17 18 21 22 23 26 29 32 33 34 35 36 LCS_GDT K 14 K 14 4 8 22 3 4 5 6 7 8 11 15 17 18 21 22 23 24 28 31 32 34 35 36 LCS_GDT R 15 R 15 4 8 22 3 4 5 6 7 8 10 15 16 18 19 19 23 24 25 26 28 29 33 36 LCS_GDT E 16 E 16 4 8 22 3 4 5 5 7 8 11 15 16 18 19 21 23 24 25 26 28 29 33 36 LCS_GDT K 17 K 17 4 8 22 3 4 5 5 7 8 9 10 12 14 16 18 19 20 20 22 24 26 28 28 LCS_GDT R 37 R 37 9 10 22 5 7 9 9 11 13 13 15 16 18 21 22 23 24 25 29 31 33 35 36 LCS_GDT Y 38 Y 38 9 10 22 5 7 9 9 11 13 13 15 17 18 21 22 23 24 28 31 33 34 35 36 LCS_GDT E 39 E 39 9 10 23 5 7 9 9 11 13 13 15 17 18 21 22 23 27 29 32 33 34 35 36 LCS_GDT A 40 A 40 9 10 23 5 7 9 9 11 13 13 15 17 18 21 22 26 27 29 32 33 34 35 36 LCS_GDT S 41 S 41 9 10 23 5 7 9 9 11 13 13 15 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT F 42 F 42 9 10 23 3 7 9 9 11 13 13 15 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT K 43 K 43 9 10 23 4 7 9 9 11 13 13 15 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT P 44 P 44 9 10 23 4 6 9 9 11 13 13 15 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT L 45 L 45 9 10 23 3 6 9 9 11 13 13 15 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT N 46 N 46 5 10 23 1 3 6 8 11 13 13 14 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT G 47 G 47 4 6 23 1 3 4 4 6 8 10 10 13 17 20 25 26 27 29 32 33 34 35 36 LCS_GDT G 48 G 48 5 6 23 4 4 5 5 7 11 11 11 13 17 20 25 26 27 29 32 33 34 35 36 LCS_GDT L 49 L 49 5 6 23 4 4 5 5 7 11 11 11 13 17 20 25 26 27 29 32 33 34 35 36 LCS_GDT E 50 E 50 5 9 23 4 4 5 7 8 11 11 11 13 17 20 25 26 27 29 32 33 34 35 36 LCS_GDT K 51 K 51 5 9 23 4 4 5 7 8 11 11 11 12 16 20 25 26 27 29 32 33 34 35 36 LCS_GDT T 52 T 52 5 9 23 3 3 5 7 8 11 11 11 13 17 20 25 26 27 29 32 33 34 35 36 LCS_GDT F 53 F 53 4 9 23 3 4 4 5 8 11 11 11 12 16 20 25 26 27 28 32 33 34 35 36 LCS_GDT R 54 R 54 4 9 23 3 4 4 7 8 11 11 11 12 14 20 22 26 27 28 32 33 34 35 36 LCS_GDT L 55 L 55 4 9 23 3 4 4 7 8 11 11 11 12 16 20 25 26 27 29 32 33 34 35 36 LCS_GDT Q 56 Q 56 4 9 23 3 4 4 7 8 11 11 11 12 13 20 25 26 27 29 32 33 34 35 36 LCS_GDT A 57 A 57 4 9 23 4 4 4 6 8 11 11 11 13 17 20 25 26 27 29 32 33 34 35 36 LCS_GDT Q 58 Q 58 4 9 23 4 4 4 7 7 11 11 11 13 17 20 25 26 27 29 32 33 34 35 36 LCS_GDT Q 59 Q 59 4 7 23 4 4 5 7 9 10 12 13 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT Y 60 Y 60 4 7 23 4 4 5 7 9 10 12 13 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT H 61 H 61 4 7 23 4 4 5 7 9 10 12 13 17 18 21 25 26 27 29 32 33 34 35 36 LCS_GDT A 62 A 62 5 7 23 3 4 5 5 7 7 8 12 17 18 21 22 23 26 29 32 33 34 35 36 LCS_GDT L 63 L 63 5 7 17 3 4 5 5 7 7 8 9 11 14 16 17 20 21 22 26 27 31 33 36 LCS_GDT T 64 T 64 5 6 17 3 4 5 5 6 7 8 9 11 14 16 17 19 19 20 22 24 27 28 30 LCS_GDT V 65 V 65 5 6 17 3 4 5 5 6 7 8 9 11 14 16 17 19 19 20 22 24 27 28 30 LCS_GDT G 66 G 66 5 6 17 3 4 5 5 6 7 8 9 11 14 16 17 19 19 20 22 24 25 28 30 LCS_GDT D 67 D 67 3 7 17 3 3 4 4 6 7 9 9 11 13 16 17 19 19 20 22 24 27 28 30 LCS_GDT Q 68 Q 68 3 7 17 3 3 4 6 7 7 9 9 11 14 16 17 19 19 20 22 24 27 28 30 LCS_GDT G 69 G 69 3 7 17 3 3 4 7 7 7 9 9 11 14 16 17 19 19 20 22 24 27 28 30 LCS_GDT T 70 T 70 4 7 17 3 3 5 7 7 7 9 9 10 14 16 17 19 19 20 22 24 27 28 30 LCS_GDT L 71 L 71 4 7 17 3 3 5 7 7 7 9 9 10 10 13 17 19 19 20 22 24 27 28 30 LCS_GDT S 72 S 72 4 7 17 3 5 5 7 7 7 9 9 10 10 12 14 15 19 20 22 24 27 28 30 LCS_GDT Y 73 Y 73 4 7 14 3 5 5 7 7 7 9 9 10 10 12 12 14 16 19 22 24 27 28 30 LCS_GDT K 74 K 74 4 7 14 3 5 5 7 7 7 9 9 10 10 12 12 14 16 16 18 20 20 24 26 LCS_GDT G 75 G 75 4 7 14 3 5 5 7 7 7 9 9 10 10 12 12 14 16 16 17 20 20 24 26 LCS_GDT T 76 T 76 4 6 14 3 4 5 5 6 7 9 9 10 10 12 12 14 16 16 18 20 21 23 25 LCS_GDT R 77 R 77 3 6 14 3 5 5 6 7 7 9 9 10 10 12 12 14 16 18 22 22 22 25 29 LCS_GDT F 78 F 78 3 5 14 3 4 4 4 5 6 7 8 10 10 13 14 18 20 21 25 26 28 29 33 LCS_GDT V 79 V 79 3 4 14 3 3 3 3 5 5 6 7 9 13 21 22 23 24 25 26 27 31 33 35 LCS_GDT G 80 G 80 3 4 11 3 3 3 3 5 5 5 7 12 18 21 22 23 24 26 28 29 31 33 36 LCS_GDT F 81 F 81 3 4 11 0 3 3 3 5 6 9 13 17 18 21 22 23 25 27 30 32 34 35 36 LCS_GDT V 82 V 82 3 3 11 2 3 3 3 5 6 6 6 9 9 11 12 18 20 23 26 29 31 33 36 LCS_GDT S 83 S 83 3 3 11 2 3 3 3 5 6 6 6 7 9 11 12 14 16 16 18 19 21 21 24 LCS_AVERAGE LCS_A: 17.58 ( 7.93 12.34 32.46 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 7 9 9 11 13 13 15 17 18 21 25 26 27 29 32 33 34 35 36 GDT PERCENT_AT 8.20 11.48 14.75 14.75 18.03 21.31 21.31 24.59 27.87 29.51 34.43 40.98 42.62 44.26 47.54 52.46 54.10 55.74 57.38 59.02 GDT RMS_LOCAL 0.31 0.64 0.95 0.95 1.48 1.79 1.79 2.76 3.43 3.54 4.18 4.76 4.83 4.94 5.38 5.63 5.80 6.02 6.17 6.41 GDT RMS_ALL_AT 15.14 15.07 15.59 15.59 17.05 16.54 16.54 15.36 14.01 14.04 14.03 15.87 15.97 15.84 15.01 15.41 15.33 14.89 15.15 14.69 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 4 L 4 15.806 4 0.158 0.158 15.806 0.000 0.000 LGA Q 5 Q 5 14.054 5 0.061 0.061 15.071 0.000 0.000 LGA Q 6 Q 6 9.581 5 0.192 0.192 10.755 2.500 1.111 LGA K 7 K 7 6.837 5 0.032 0.032 7.867 17.024 7.566 LGA Q 8 Q 8 3.115 5 0.098 0.098 4.109 43.571 19.365 LGA V 9 V 9 2.950 3 0.152 0.152 3.381 57.500 32.857 LGA V 10 V 10 2.969 3 0.072 0.072 3.404 61.190 34.966 LGA V 11 V 11 1.881 3 0.237 0.237 4.726 56.548 32.313 LGA S 12 S 12 5.598 2 0.568 0.568 5.598 31.905 21.270 LGA N 13 N 13 4.358 4 0.043 0.043 5.562 30.357 15.179 LGA K 14 K 14 5.021 5 0.103 0.103 6.046 25.476 11.323 LGA R 15 R 15 8.095 7 0.100 0.100 8.095 8.095 2.944 LGA E 16 E 16 7.602 5 0.179 0.179 8.772 5.000 2.222 LGA K 17 K 17 11.537 5 0.010 0.010 11.537 0.238 0.106 LGA R 37 R 37 2.365 7 0.194 0.194 3.640 61.429 22.338 LGA Y 38 Y 38 1.350 8 0.036 0.036 1.649 79.286 26.429 LGA E 39 E 39 1.447 5 0.065 0.065 1.614 79.286 35.238 LGA A 40 A 40 1.580 1 0.028 0.028 1.580 79.286 63.429 LGA S 41 S 41 1.579 2 0.041 0.041 1.676 72.857 48.571 LGA F 42 F 42 1.704 7 0.146 0.146 1.720 75.000 27.273 LGA K 43 K 43 2.532 5 0.063 0.063 2.532 64.881 28.836 LGA P 44 P 44 2.583 3 0.055 0.055 3.469 55.357 31.633 LGA L 45 L 45 2.998 4 0.644 0.644 5.326 45.952 22.976 LGA N 46 N 46 4.737 4 0.553 0.553 6.274 28.333 14.167 LGA G 47 G 47 10.357 0 0.440 0.440 10.452 1.190 1.190 LGA G 48 G 48 11.778 0 0.706 0.706 11.778 0.000 0.000 LGA L 49 L 49 11.969 4 0.025 0.025 12.036 0.000 0.000 LGA E 50 E 50 11.543 5 0.365 0.365 11.543 0.000 0.000 LGA K 51 K 51 11.751 5 0.285 0.285 11.751 0.000 0.000 LGA T 52 T 52 12.180 3 0.287 0.287 15.125 0.000 0.000 LGA F 53 F 53 14.141 7 0.667 0.667 14.472 0.000 0.000 LGA R 54 R 54 14.540 7 0.073 0.073 14.556 0.000 0.000 LGA L 55 L 55 13.458 4 0.171 0.171 13.653 0.000 0.000 LGA Q 56 Q 56 14.329 5 0.063 0.063 14.863 0.000 0.000 LGA A 57 A 57 14.476 1 0.614 0.614 14.476 0.000 0.000 LGA Q 58 Q 58 16.352 5 0.034 0.034 16.352 0.000 0.000 LGA Q 59 Q 59 12.929 5 0.034 0.034 13.810 0.000 0.000 LGA Y 60 Y 60 8.910 8 0.410 0.410 11.425 0.833 0.278 LGA H 61 H 61 9.991 6 0.109 0.109 12.829 0.476 0.190 LGA A 62 A 62 14.167 1 0.542 0.542 15.740 0.000 0.000 LGA L 63 L 63 15.457 4 0.182 0.182 17.163 0.000 0.000 LGA T 64 T 64 21.448 3 0.028 0.028 23.264 0.000 0.000 LGA V 65 V 65 24.147 3 0.013 0.013 27.759 0.000 0.000 LGA G 66 G 66 31.617 0 0.144 0.144 34.433 0.000 0.000 LGA D 67 D 67 31.996 4 0.326 0.326 31.996 0.000 0.000 LGA Q 68 Q 68 33.270 5 0.619 0.619 33.270 0.000 0.000 LGA G 69 G 69 32.555 0 0.656 0.656 33.004 0.000 0.000 LGA T 70 T 70 30.990 3 0.050 0.050 31.555 0.000 0.000 LGA L 71 L 71 25.482 4 0.305 0.305 27.699 0.000 0.000 LGA S 72 S 72 20.926 2 0.282 0.282 22.157 0.000 0.000 LGA Y 73 Y 73 17.931 8 0.122 0.122 21.125 0.000 0.000 LGA K 74 K 74 20.985 5 0.321 0.321 20.985 0.000 0.000 LGA G 75 G 75 20.033 0 0.425 0.425 21.075 0.000 0.000 LGA T 76 T 76 16.224 3 0.214 0.214 17.935 0.000 0.000 LGA R 77 R 77 12.690 7 0.585 0.585 14.541 0.000 0.000 LGA F 78 F 78 10.363 7 0.587 0.587 11.002 0.119 0.043 LGA V 79 V 79 15.039 3 0.112 0.112 15.108 0.000 0.000 LGA G 80 G 80 14.927 0 0.584 0.584 15.026 0.000 0.000 LGA F 81 F 81 13.477 7 0.621 0.621 15.990 0.000 0.000 LGA V 82 V 82 20.240 3 0.478 0.478 22.242 0.000 0.000 LGA S 83 S 83 22.217 2 0.467 0.467 25.700 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 61 244 244 100.00 490 244 49.80 61 SUMMARY(RMSD_GDC): 12.904 12.774 12.774 16.126 8.259 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 80 61 4.0 15 2.76 25.820 22.454 0.524 LGA_LOCAL RMSD: 2.762 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.359 Number of assigned atoms: 61 Std_ASGN_ATOMS RMSD: 12.904 Standard rmsd on all 61 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.379512 * X + -0.702291 * Y + -0.602294 * Z + 14.909410 Y_new = -0.913972 * X + -0.183532 * Y + -0.361900 * Z + 36.667088 Z_new = 0.143620 * X + 0.687825 * Y + -0.711527 * Z + -21.076345 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.177227 -0.144118 2.373131 [DEG: -67.4501 -8.2573 135.9704 ] ZXZ: -1.029737 2.362465 0.205845 [DEG: -58.9996 135.3593 11.7941 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0564TS328_1-D1 REMARK 2: T0564-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0564TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 80 61 4.0 15 2.76 22.454 12.90 REMARK ---------------------------------------------------------- MOLECULE T0564TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0564 REMARK MODEL 1 REMARK PARENT 2rim_A ATOM 13 N LEU 4 17.926 -13.097 -1.557 1.00 3.00 N ATOM 14 CA LEU 4 18.200 -11.885 -2.342 1.00 3.00 C ATOM 15 C LEU 4 17.603 -10.627 -1.704 1.00 3.00 C ATOM 16 O LEU 4 16.511 -10.660 -1.157 1.00 3.00 O ATOM 17 N GLN 5 18.330 -9.517 -1.804 1.00 3.00 N ATOM 18 CA GLN 5 18.062 -8.316 -1.026 1.00 3.00 C ATOM 19 C GLN 5 17.220 -7.342 -1.825 1.00 3.00 C ATOM 20 O GLN 5 17.576 -7.004 -2.948 1.00 3.00 O ATOM 21 N GLN 6 16.111 -6.906 -1.244 1.00 3.00 N ATOM 22 CA GLN 6 15.227 -5.923 -1.870 1.00 3.00 C ATOM 23 C GLN 6 14.917 -4.848 -0.822 1.00 3.00 C ATOM 24 O GLN 6 15.231 -5.031 0.349 1.00 3.00 O ATOM 25 N LYS 7 14.336 -3.730 -1.261 1.00 3.00 N ATOM 26 CA LYS 7 13.842 -2.683 -0.387 1.00 3.00 C ATOM 27 C LYS 7 12.512 -2.232 -0.954 1.00 3.00 C ATOM 28 O LYS 7 12.285 -2.383 -2.141 1.00 3.00 O ATOM 29 N GLN 8 11.641 -1.680 -0.118 1.00 3.00 N ATOM 30 CA GLN 8 10.340 -1.219 -0.588 1.00 3.00 C ATOM 31 C GLN 8 9.914 0.069 0.079 1.00 3.00 C ATOM 32 O GLN 8 10.354 0.397 1.163 1.00 3.00 O ATOM 33 N VAL 9 9.099 0.813 -0.640 1.00 3.00 N ATOM 34 CA VAL 9 8.408 1.972 -0.133 1.00 3.00 C ATOM 35 C VAL 9 6.924 1.623 -0.164 1.00 3.00 C ATOM 36 O VAL 9 6.423 1.155 -1.175 1.00 3.00 O ATOM 37 N VAL 10 6.249 1.844 0.963 1.00 3.00 N ATOM 38 CA VAL 10 4.810 1.731 1.107 1.00 3.00 C ATOM 39 C VAL 10 4.306 3.099 1.603 1.00 3.00 C ATOM 40 O VAL 10 4.521 3.475 2.729 1.00 3.00 O ATOM 41 N VAL 11 3.670 3.848 0.716 1.00 3.00 N ATOM 42 CA VAL 11 3.215 5.190 1.002 1.00 3.00 C ATOM 43 C VAL 11 1.691 5.186 1.060 1.00 3.00 C ATOM 44 O VAL 11 1.061 4.414 0.344 1.00 3.00 O ATOM 45 N SER 12 1.099 6.062 1.880 1.00 3.00 N ATOM 46 CA SER 12 -0.357 6.106 2.058 1.00 3.00 C ATOM 47 C SER 12 -0.835 7.533 2.293 1.00 3.00 C ATOM 48 O SER 12 -0.276 8.229 3.110 1.00 3.00 O ATOM 49 N ASN 13 -1.864 7.968 1.570 1.00 3.00 N ATOM 50 CA ASN 13 -2.485 9.241 1.880 1.00 3.00 C ATOM 51 C ASN 13 -3.334 9.155 3.174 1.00 3.00 C ATOM 52 O ASN 13 -3.658 8.053 3.679 1.00 3.00 O ATOM 53 N LYS 14 -3.688 10.320 3.699 1.00 3.00 N ATOM 54 CA LYS 14 -4.568 10.427 4.860 1.00 3.00 C ATOM 55 C LYS 14 -6.001 10.203 4.381 1.00 3.00 C ATOM 56 O LYS 14 -6.479 10.958 3.522 1.00 3.00 O ATOM 57 N ARG 15 -6.701 9.183 4.944 1.00 3.00 N ATOM 58 CA ARG 15 -8.072 8.880 4.537 1.00 3.00 C ATOM 59 C ARG 15 -8.951 10.127 4.491 1.00 3.00 C ATOM 60 O ARG 15 -8.843 10.984 5.367 1.00 3.00 O ATOM 61 N GLU 16 -9.813 10.239 3.484 1.00 3.00 N ATOM 62 CA GLU 16 -10.672 11.427 3.382 1.00 3.00 C ATOM 63 C GLU 16 -12.074 11.172 2.844 1.00 3.00 C ATOM 64 O GLU 16 -12.272 10.284 2.035 1.00 3.00 O ATOM 65 N LYS 17 -13.042 11.965 3.287 1.00 3.00 N ATOM 66 CA LYS 17 -14.404 11.858 2.800 1.00 3.00 C ATOM 67 C LYS 17 -14.490 12.241 1.328 1.00 3.00 C ATOM 68 O LYS 17 -13.915 13.249 0.924 1.00 3.00 O ATOM 69 N PRO 18 -15.209 11.441 0.536 1.00 3.00 N ATOM 70 CA PRO 18 -15.275 11.637 -0.922 1.00 3.00 C ATOM 71 C PRO 18 -16.729 11.535 -1.459 1.00 3.00 C ATOM 72 O PRO 18 -17.684 11.370 -0.691 1.00 3.00 O ATOM 73 N VAL 19 -16.913 11.677 -2.766 1.00 3.00 N ATOM 74 CA VAL 19 -18.260 11.494 -3.327 1.00 3.00 C ATOM 75 C VAL 19 -18.486 9.974 -3.349 1.00 3.00 C ATOM 76 O VAL 19 -17.528 9.196 -3.248 1.00 3.00 O ATOM 77 N ASN 20 -19.741 9.556 -3.458 1.00 3.00 N ATOM 78 CA ASN 20 -20.063 8.145 -3.538 1.00 3.00 C ATOM 79 C ASN 20 -19.342 7.567 -4.758 1.00 3.00 C ATOM 80 O ASN 20 -19.225 8.256 -5.764 1.00 3.00 O ATOM 81 N ASP 21 -18.800 6.349 -4.647 1.00 3.00 N ATOM 82 CA ASP 21 -18.213 5.633 -5.788 1.00 3.00 C ATOM 83 C ASP 21 -19.186 5.580 -6.991 1.00 3.00 C ATOM 84 O ASP 21 -18.771 5.741 -8.137 1.00 3.00 O ATOM 85 N ARG 22 -20.472 5.377 -6.712 1.00 3.00 N ATOM 86 CA ARG 22 -21.510 5.334 -7.731 1.00 3.00 C ATOM 87 C ARG 22 -22.510 6.424 -7.419 1.00 3.00 C ATOM 88 O ARG 22 -22.997 6.514 -6.287 1.00 3.00 O ATOM 89 N ARG 23 -22.801 7.234 -8.439 1.00 3.00 N ATOM 90 CA ARG 23 -23.797 8.312 -8.368 1.00 3.00 C ATOM 91 C ARG 23 -25.114 7.826 -7.787 1.00 3.00 C ATOM 92 O ARG 23 -25.803 7.024 -8.415 1.00 3.00 O ATOM 93 N SER 24 -25.463 8.305 -6.573 1.00 3.00 N ATOM 94 CA SER 24 -26.783 8.066 -5.991 1.00 3.00 C ATOM 95 C SER 24 -27.899 8.544 -6.907 1.00 3.00 C ATOM 96 O SER 24 -27.734 9.526 -7.627 1.00 3.00 O ATOM 97 N ARG 25 -29.017 7.829 -6.888 1.00 3.00 N ATOM 98 CA ARG 25 -30.232 8.288 -7.545 1.00 3.00 C ATOM 99 C ARG 25 -31.301 8.593 -6.510 1.00 3.00 C ATOM 100 O ARG 25 -31.231 8.104 -5.378 1.00 3.00 O ATOM 101 N GLN 26 -32.284 9.398 -6.905 1.00 3.00 N ATOM 102 CA GLN 26 -33.326 9.885 -5.986 1.00 3.00 C ATOM 103 C GLN 26 -34.360 8.826 -5.568 1.00 3.00 C ATOM 104 O GLN 26 -35.251 9.103 -4.761 1.00 3.00 O ATOM 105 N GLN 27 -34.230 7.618 -6.115 1.00 3.00 N ATOM 106 CA GLN 27 -35.140 6.513 -5.800 1.00 3.00 C ATOM 107 C GLN 27 -34.508 5.601 -4.776 1.00 3.00 C ATOM 108 O GLN 27 -35.160 4.789 -4.141 1.00 3.00 O ATOM 109 N GLU 28 -33.220 5.751 -4.634 1.00 3.00 N ATOM 110 CA GLU 28 -32.450 5.003 -3.664 1.00 3.00 C ATOM 111 C GLU 28 -32.957 5.135 -2.258 1.00 3.00 C ATOM 112 O GLU 28 -33.451 6.172 -1.846 1.00 3.00 O ATOM 113 N VAL 29 -32.827 4.056 -1.513 1.00 3.00 N ATOM 114 CA VAL 29 -33.203 4.140 -0.134 1.00 3.00 C ATOM 115 C VAL 29 -31.980 4.553 0.682 1.00 3.00 C ATOM 116 O VAL 29 -32.109 5.102 1.784 1.00 3.00 O ATOM 117 N SER 30 -30.798 4.288 0.143 1.00 3.00 N ATOM 118 CA SER 30 -29.556 4.585 0.812 1.00 3.00 C ATOM 119 C SER 30 -28.750 5.597 0.042 1.00 3.00 C ATOM 120 O SER 30 -28.611 5.536 -1.181 1.00 3.00 O ATOM 121 N PRO 31 -28.254 6.499 0.846 1.00 3.00 N ATOM 122 CA PRO 31 -27.257 7.376 0.393 1.00 3.00 C ATOM 123 C PRO 31 -26.211 6.942 1.418 1.00 3.00 C ATOM 124 O PRO 31 -26.517 6.888 2.602 1.00 3.00 O ATOM 125 N ALA 32 -25.001 6.639 1.013 1.00 3.00 N ATOM 126 CA ALA 32 -23.961 6.331 1.933 1.00 3.00 C ATOM 127 C ALA 32 -23.776 7.480 2.883 1.00 3.00 C ATOM 128 O ALA 32 -23.584 8.608 2.459 1.00 3.00 O ATOM 129 N GLY 33 -23.862 7.206 4.160 1.00 3.00 N ATOM 130 CA GLY 33 -23.679 8.336 5.048 1.00 3.00 C ATOM 131 C GLY 33 -22.266 8.917 4.798 1.00 3.00 C ATOM 132 O GLY 33 -22.030 10.105 5.026 1.00 3.00 O ATOM 133 N THR 34 -21.360 8.068 4.324 1.00 3.00 N ATOM 134 CA THR 34 -19.994 8.507 4.087 1.00 3.00 C ATOM 135 C THR 34 -19.200 7.514 3.246 1.00 3.00 C ATOM 136 O THR 34 -19.396 6.304 3.349 1.00 3.00 O ATOM 137 N SER 35 -18.308 8.031 2.411 1.00 3.00 N ATOM 138 CA SER 35 -17.392 7.238 1.593 1.00 3.00 C ATOM 139 C SER 35 -15.972 7.733 1.916 1.00 3.00 C ATOM 140 O SER 35 -15.666 8.915 1.760 1.00 3.00 O ATOM 141 N MET 36 -15.113 6.824 2.357 1.00 3.00 N ATOM 142 CA MET 36 -13.752 7.174 2.768 1.00 3.00 C ATOM 143 C MET 36 -12.745 6.637 1.724 1.00 3.00 C ATOM 144 O MET 36 -12.686 5.426 1.463 1.00 3.00 O ATOM 145 N ARG 37 -11.966 7.528 1.115 1.00 3.00 N ATOM 146 CA ARG 37 -10.964 7.126 0.122 1.00 3.00 C ATOM 147 C ARG 37 -9.534 7.261 0.645 1.00 3.00 C ATOM 148 O ARG 37 -9.188 8.274 1.259 1.00 3.00 O ATOM 149 N TYR 38 -8.708 6.270 0.349 1.00 3.00 N ATOM 150 CA TYR 38 -7.296 6.255 0.740 1.00 3.00 C ATOM 151 C TYR 38 -6.486 5.681 -0.405 1.00 3.00 C ATOM 152 O TYR 38 -6.820 4.614 -0.941 1.00 3.00 O ATOM 153 N GLU 39 -5.433 6.388 -0.797 1.00 3.00 N ATOM 154 CA GLU 39 -4.505 5.864 -1.779 1.00 3.00 C ATOM 155 C GLU 39 -3.309 5.129 -1.096 1.00 3.00 C ATOM 156 O GLU 39 -2.744 5.619 -0.144 1.00 3.00 O ATOM 157 N ALA 40 -2.987 3.931 -1.565 1.00 3.00 N ATOM 158 CA ALA 40 -1.742 3.240 -1.209 1.00 3.00 C ATOM 159 C ALA 40 -0.837 3.273 -2.469 1.00 3.00 C ATOM 160 O ALA 40 -1.327 2.967 -3.556 1.00 3.00 O ATOM 161 N SER 41 0.440 3.663 -2.328 1.00 3.00 N ATOM 162 CA SER 41 1.419 3.664 -3.426 1.00 3.00 C ATOM 163 C SER 41 2.647 2.871 -3.014 1.00 3.00 C ATOM 164 O SER 41 3.247 3.149 -1.972 1.00 3.00 O ATOM 165 N PHE 42 3.028 1.899 -3.847 1.00 3.00 N ATOM 166 CA PHE 42 4.113 0.994 -3.517 1.00 3.00 C ATOM 167 C PHE 42 5.200 1.101 -4.579 1.00 3.00 C ATOM 168 O PHE 42 4.892 1.254 -5.751 1.00 3.00 O ATOM 169 N LYS 43 6.466 0.996 -4.158 1.00 3.00 N ATOM 170 CA LYS 43 7.591 0.894 -5.064 1.00 3.00 C ATOM 171 C LYS 43 8.541 -0.150 -4.538 1.00 3.00 C ATOM 172 O LYS 43 8.757 -0.225 -3.340 1.00 3.00 O ATOM 173 N PRO 44 9.108 -0.960 -5.420 1.00 3.00 N ATOM 174 CA PRO 44 10.083 -1.975 -4.987 1.00 3.00 C ATOM 175 C PRO 44 11.444 -1.648 -5.607 1.00 3.00 C ATOM 176 O PRO 44 11.527 -1.202 -6.766 1.00 3.00 O ATOM 177 N LEU 45 12.495 -1.853 -4.824 1.00 3.00 N ATOM 178 CA LEU 45 13.849 -1.496 -5.242 1.00 3.00 C ATOM 179 C LEU 45 14.756 -2.703 -5.162 1.00 3.00 C ATOM 180 O LEU 45 14.630 -3.518 -4.253 1.00 3.00 O ATOM 181 N ASN 46 15.696 -2.789 -6.093 1.00 3.00 N ATOM 182 CA ASN 46 16.738 -3.795 -6.047 1.00 3.00 C ATOM 183 C ASN 46 18.048 -3.152 -6.488 1.00 3.00 C ATOM 184 O ASN 46 18.101 -2.493 -7.543 1.00 3.00 O ATOM 185 N GLY 47 19.087 -3.345 -5.670 1.00 3.00 N ATOM 186 CA GLY 47 20.429 -2.871 -5.953 1.00 3.00 C ATOM 187 C GLY 47 20.324 -1.556 -6.702 1.00 3.00 C ATOM 188 O GLY 47 20.365 -0.490 -6.083 1.00 3.00 O ATOM 189 N GLY 48 20.195 -1.615 -8.030 1.00 3.00 N ATOM 190 CA GLY 48 20.137 -0.401 -8.845 1.00 3.00 C ATOM 191 C GLY 48 18.763 -0.020 -9.365 1.00 3.00 C ATOM 192 O GLY 48 18.616 0.980 -10.058 1.00 3.00 O ATOM 193 N LEU 49 17.741 -0.820 -9.055 1.00 3.00 N ATOM 194 CA LEU 49 16.394 -0.482 -9.495 1.00 3.00 C ATOM 195 C LEU 49 16.033 0.866 -8.868 1.00 3.00 C ATOM 196 O LEU 49 16.293 1.102 -7.687 1.00 3.00 O ATOM 197 N GLU 50 15.436 1.774 -9.664 1.00 9.00 N ATOM 198 CA GLU 50 15.047 3.116 -9.203 1.00 9.00 C ATOM 199 C GLU 50 13.825 3.220 -8.292 1.00 9.00 C ATOM 200 O GLU 50 12.846 3.868 -8.630 1.00 9.00 O ATOM 201 N LYS 51 13.895 2.567 -7.132 1.00 3.00 N ATOM 202 CA LYS 51 12.827 2.616 -6.138 1.00 3.00 C ATOM 203 C LYS 51 11.408 2.517 -6.712 1.00 3.00 C ATOM 204 O LYS 51 10.540 3.329 -6.380 1.00 3.00 O ATOM 205 N THR 52 11.171 1.523 -7.550 1.00 3.00 N ATOM 206 CA THR 52 9.862 1.362 -8.177 1.00 3.00 C ATOM 207 C THR 52 9.766 -0.062 -8.717 1.00 3.00 C ATOM 208 O THR 52 10.759 -0.803 -8.727 1.00 3.00 O ATOM 209 N PHE 53 8.564 -0.452 -9.148 1.00 3.00 N ATOM 210 CA PHE 53 8.359 -1.783 -9.728 1.00 3.00 C ATOM 211 C PHE 53 7.551 -0.675 -9.014 1.00 3.00 C ATOM 212 O PHE 53 8.028 -0.077 -8.068 1.00 3.00 O ATOM 213 N ARG 54 6.347 -0.391 -9.482 1.00 3.00 N ATOM 214 CA ARG 54 5.438 0.506 -8.762 1.00 3.00 C ATOM 215 C ARG 54 3.957 0.161 -8.959 1.00 3.00 C ATOM 216 O ARG 54 3.580 -0.337 -10.001 1.00 3.00 O ATOM 217 N LEU 55 3.137 0.455 -7.945 1.00 3.00 N ATOM 218 CA LEU 55 1.733 0.008 -7.876 1.00 3.00 C ATOM 219 C LEU 55 0.804 0.847 -7.006 1.00 3.00 C ATOM 220 O LEU 55 1.083 1.080 -5.829 1.00 3.00 O ATOM 221 N GLN 56 -0.280 1.340 -7.593 1.00 3.00 N ATOM 222 CA GLN 56 -1.194 2.151 -6.820 1.00 3.00 C ATOM 223 C GLN 56 -2.620 2.122 -7.359 1.00 3.00 C ATOM 224 O GLN 56 -2.890 1.824 -8.511 1.00 3.00 O ATOM 225 N ALA 57 -3.500 2.478 -6.444 1.00 3.00 N ATOM 226 CA ALA 57 -4.925 2.598 -6.701 1.00 3.00 C ATOM 227 C ALA 57 -5.418 3.876 -6.019 1.00 3.00 C ATOM 228 O ALA 57 -5.439 3.909 -4.794 1.00 3.00 O ATOM 229 N GLN 58 -5.687 4.924 -6.793 1.00 9.00 N ATOM 230 CA GLN 58 -6.126 6.166 -6.158 1.00 9.00 C ATOM 231 C GLN 58 -7.455 5.953 -5.443 1.00 9.00 C ATOM 232 O GLN 58 -7.755 6.703 -4.520 1.00 9.00 O ATOM 233 N GLN 59 -8.223 4.967 -5.878 1.00 9.00 N ATOM 234 CA GLN 59 -9.495 4.641 -5.225 1.00 9.00 C ATOM 235 C GLN 59 -9.208 3.997 -3.867 1.00 9.00 C ATOM 236 O GLN 59 -9.906 4.225 -2.889 1.00 9.00 O ATOM 237 N TYR 60 -8.135 3.218 -3.808 1.00 3.00 N ATOM 238 CA TYR 60 -7.650 2.552 -2.641 1.00 3.00 C ATOM 239 C TYR 60 -8.693 2.019 -1.693 1.00 3.00 C ATOM 240 O TYR 60 -9.584 1.233 -2.025 1.00 3.00 O ATOM 241 N HIS 61 -8.570 2.418 -0.437 1.00 3.00 N ATOM 242 CA HIS 61 -9.366 1.984 0.686 1.00 3.00 C ATOM 243 C HIS 61 -10.859 1.939 0.446 1.00 3.00 C ATOM 244 O HIS 61 -11.559 1.120 1.058 1.00 3.00 O ATOM 245 N ALA 62 -11.385 2.850 -0.345 1.00 3.00 N ATOM 246 CA ALA 62 -12.829 2.943 -0.555 1.00 3.00 C ATOM 247 C ALA 62 -13.558 2.147 0.518 1.00 3.00 C ATOM 248 O ALA 62 -13.711 0.926 0.372 1.00 3.00 O ATOM 249 N LEU 63 -13.974 2.813 1.599 1.00 3.00 N ATOM 250 CA LEU 63 -14.867 2.190 2.566 1.00 3.00 C ATOM 251 C LEU 63 -16.164 2.977 2.510 1.00 3.00 C ATOM 252 O LEU 63 -16.149 4.159 2.752 1.00 3.00 O ATOM 253 N THR 64 -17.258 2.328 2.131 1.00 3.00 N ATOM 254 CA THR 64 -18.565 2.991 2.055 1.00 3.00 C ATOM 255 C THR 64 -19.420 2.607 3.249 1.00 3.00 C ATOM 256 O THR 64 -19.565 1.423 3.573 1.00 3.00 O ATOM 257 N VAL 65 -19.961 3.628 3.907 1.00 3.00 N ATOM 258 CA VAL 65 -20.749 3.445 5.107 1.00 3.00 C ATOM 259 C VAL 65 -22.200 3.811 4.874 1.00 3.00 C ATOM 260 O VAL 65 -22.505 4.893 4.384 1.00 3.00 O ATOM 261 N GLY 66 -23.089 2.881 5.197 1.00 3.00 N ATOM 262 CA GLY 66 -24.521 3.142 5.106 1.00 3.00 C ATOM 263 C GLY 66 -25.059 3.381 6.512 1.00 3.00 C ATOM 264 O GLY 66 -25.790 4.337 6.744 1.00 3.00 O ATOM 265 N ASP 67 -24.662 2.516 7.442 1.00 3.00 N ATOM 266 CA ASP 67 -25.044 2.603 8.847 1.00 3.00 C ATOM 267 C ASP 67 -23.907 2.099 9.735 1.00 3.00 C ATOM 268 O ASP 67 -22.809 1.763 9.250 1.00 3.00 O ATOM 269 N GLN 68 -24.203 2.038 11.037 1.00 3.00 N ATOM 270 CA GLN 68 -23.365 1.372 12.038 1.00 3.00 C ATOM 271 C GLN 68 -23.048 -0.087 11.645 1.00 3.00 C ATOM 272 O GLN 68 -21.907 -0.545 11.792 1.00 3.00 O ATOM 273 N GLY 69 -24.061 -0.791 11.122 1.00 3.00 N ATOM 274 CA GLY 69 -24.016 -2.252 10.932 1.00 3.00 C ATOM 275 C GLY 69 -23.581 -2.775 9.546 1.00 3.00 C ATOM 276 O GLY 69 -23.086 -3.906 9.444 1.00 3.00 O ATOM 277 N THR 70 -23.773 -1.978 8.489 1.00 3.00 N ATOM 278 CA THR 70 -23.409 -2.403 7.128 1.00 3.00 C ATOM 279 C THR 70 -22.452 -1.438 6.405 1.00 3.00 C ATOM 280 O THR 70 -22.567 -0.194 6.480 1.00 3.00 O ATOM 281 N LEU 71 -21.501 -2.044 5.714 1.00 3.00 N ATOM 282 CA LEU 71 -20.404 -1.331 5.147 1.00 3.00 C ATOM 283 C LEU 71 -19.349 -2.043 4.315 1.00 3.00 C ATOM 284 O LEU 71 -19.684 -2.945 3.541 1.00 3.00 O ATOM 285 N SER 72 -18.093 -1.669 4.443 1.00 3.00 N ATOM 286 CA SER 72 -17.083 -2.367 3.657 1.00 3.00 C ATOM 287 C SER 72 -16.571 -1.611 2.441 1.00 3.00 C ATOM 288 O SER 72 -16.913 -0.437 2.237 1.00 3.00 O ATOM 289 N TYR 73 -15.751 -2.272 1.620 1.00 3.00 N ATOM 290 CA TYR 73 -15.192 -1.645 0.423 1.00 3.00 C ATOM 291 C TYR 73 -16.228 -1.348 -0.638 1.00 3.00 C ATOM 292 O TYR 73 -17.076 -2.178 -0.963 1.00 3.00 O ATOM 293 N LYS 74 -16.176 -0.128 -1.158 1.00 9.00 N ATOM 294 CA LYS 74 -17.080 0.303 -2.182 1.00 9.00 C ATOM 295 C LYS 74 -16.471 0.037 -3.549 1.00 9.00 C ATOM 296 O LYS 74 -15.307 -0.383 -3.689 1.00 9.00 O ATOM 297 N GLY 75 -17.256 0.299 -4.581 1.00 9.00 N ATOM 298 CA GLY 75 -16.797 0.098 -5.933 1.00 9.00 C ATOM 299 C GLY 75 -15.666 1.084 -6.306 1.00 9.00 C ATOM 300 O GLY 75 -14.823 0.756 -7.145 1.00 9.00 O ATOM 301 N THR 76 -15.617 2.263 -5.691 1.00 9.00 N ATOM 302 CA THR 76 -14.504 3.179 -6.003 1.00 9.00 C ATOM 303 C THR 76 -13.210 2.568 -5.433 1.00 9.00 C ATOM 304 O THR 76 -12.148 2.611 -6.072 1.00 9.00 O ATOM 305 N ARG 77 -13.296 1.967 -4.256 1.00 9.00 N ATOM 306 CA ARG 77 -12.106 1.323 -3.644 1.00 9.00 C ATOM 307 C ARG 77 -11.588 0.252 -4.590 1.00 9.00 C ATOM 308 O ARG 77 -10.390 0.154 -4.834 1.00 9.00 O ATOM 309 N PHE 78 -12.509 -0.555 -5.118 1.00 3.00 N ATOM 310 CA PHE 78 -12.162 -1.616 -6.056 1.00 3.00 C ATOM 311 C PHE 78 -11.515 -0.990 -7.297 1.00 3.00 C ATOM 312 O PHE 78 -10.462 -1.443 -7.751 1.00 3.00 O ATOM 313 N VAL 79 -12.122 0.063 -7.856 1.00 3.00 N ATOM 314 CA VAL 79 -11.551 0.690 -9.040 1.00 3.00 C ATOM 315 C VAL 79 -10.144 1.185 -8.719 1.00 3.00 C ATOM 316 O VAL 79 -9.221 1.113 -9.545 1.00 3.00 O ATOM 317 N GLY 80 -9.984 1.690 -7.505 1.00 9.00 N ATOM 318 CA GLY 80 -8.684 2.159 -7.034 1.00 9.00 C ATOM 319 C GLY 80 -7.647 1.026 -7.053 1.00 9.00 C ATOM 320 O GLY 80 -6.508 1.221 -7.466 1.00 9.00 O ATOM 321 N PHE 81 -8.038 -0.179 -6.608 1.00 3.00 N ATOM 322 CA PHE 81 -7.113 -1.312 -6.623 1.00 3.00 C ATOM 323 C PHE 81 -6.688 -1.504 -8.059 1.00 3.00 C ATOM 324 O PHE 81 -5.563 -1.916 -8.324 1.00 3.00 O ATOM 325 N VAL 82 -7.603 -1.218 -8.981 1.00 3.00 N ATOM 326 CA VAL 82 -7.306 -1.389 -10.398 1.00 3.00 C ATOM 327 C VAL 82 -6.490 -0.253 -10.992 1.00 3.00 C ATOM 328 O VAL 82 -6.204 -0.256 -12.177 1.00 3.00 O ATOM 329 N SER 83 -6.135 0.738 -10.172 1.00 3.00 N ATOM 330 CA SER 83 -5.373 1.869 -10.659 1.00 3.00 C ATOM 331 C SER 83 -4.269 1.672 -11.680 1.00 3.00 C ATOM 332 O SER 83 -4.515 1.809 -12.859 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 244 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 76.17 39.0 82 70.1 117 ARMSMC SECONDARY STRUCTURE . . 61.78 52.4 42 63.6 66 ARMSMC SURFACE . . . . . . . . 81.35 36.7 60 70.6 85 ARMSMC BURIED . . . . . . . . 59.78 45.5 22 68.8 32 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 41 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 29 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 22 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 17 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 12 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 5 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.90 (Number of atoms: 61) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.90 61 100.0 61 CRMSCA CRN = ALL/NP . . . . . 0.2115 CRMSCA SECONDARY STRUCTURE . . 12.02 33 100.0 33 CRMSCA SURFACE . . . . . . . . 13.43 45 100.0 45 CRMSCA BURIED . . . . . . . . 11.30 16 100.0 16 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.78 244 81.6 299 CRMSMC SECONDARY STRUCTURE . . 12.04 132 81.0 163 CRMSMC SURFACE . . . . . . . . 13.17 180 81.8 220 CRMSMC BURIED . . . . . . . . 11.60 64 81.0 79 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 745 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 699 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 429 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 555 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 190 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.78 244 24.7 989 CRMSALL SECONDARY STRUCTURE . . 12.04 132 23.5 561 CRMSALL SURFACE . . . . . . . . 13.17 180 24.5 735 CRMSALL BURIED . . . . . . . . 11.60 64 25.2 254 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.146 0.486 0.255 61 100.0 61 ERRCA SECONDARY STRUCTURE . . 7.349 0.463 0.244 33 100.0 33 ERRCA SURFACE . . . . . . . . 8.644 0.504 0.268 45 100.0 45 ERRCA BURIED . . . . . . . . 6.744 0.436 0.218 16 100.0 16 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.028 0.480 0.250 244 81.6 299 ERRMC SECONDARY STRUCTURE . . 7.342 0.457 0.237 132 81.0 163 ERRMC SURFACE . . . . . . . . 8.376 0.492 0.259 180 81.8 220 ERRMC BURIED . . . . . . . . 7.048 0.448 0.225 64 81.0 79 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 745 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 699 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 429 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 555 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 190 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.028 0.480 0.250 244 24.7 989 ERRALL SECONDARY STRUCTURE . . 7.342 0.457 0.237 132 23.5 561 ERRALL SURFACE . . . . . . . . 8.376 0.492 0.259 180 24.5 735 ERRALL BURIED . . . . . . . . 7.048 0.448 0.225 64 25.2 254 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 3 9 24 61 61 DISTCA CA (P) 0.00 1.64 4.92 14.75 39.34 61 DISTCA CA (RMS) 0.00 1.34 2.01 3.74 6.27 DISTCA ALL (N) 0 6 12 32 96 244 989 DISTALL ALL (P) 0.00 0.61 1.21 3.24 9.71 989 DISTALL ALL (RMS) 0.00 1.70 2.07 3.54 6.20 DISTALL END of the results output