####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 42 ( 331), selected 42 , name T0564TS171_1-D1 # Molecule2: number of CA atoms 61 ( 989), selected 42 , name T0564-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0564TS171_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 51 - 77 4.83 11.69 LONGEST_CONTINUOUS_SEGMENT: 27 52 - 78 4.82 12.23 LCS_AVERAGE: 39.66 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 61 - 73 1.98 12.91 LCS_AVERAGE: 14.44 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 57 - 64 0.85 13.96 LCS_AVERAGE: 8.35 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 42 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT F 42 F 42 3 3 15 0 3 3 5 5 5 5 6 6 6 9 14 18 18 19 21 21 22 25 28 LCS_GDT K 43 K 43 3 3 23 3 3 3 5 5 5 5 6 7 7 9 15 18 21 22 23 24 29 29 30 LCS_GDT P 44 P 44 4 7 23 4 4 5 6 8 9 11 13 15 16 18 20 22 23 24 26 28 29 30 31 LCS_GDT L 45 L 45 4 7 23 4 4 4 4 6 9 11 12 14 18 18 20 22 23 24 26 28 29 30 31 LCS_GDT N 46 N 46 4 7 23 4 4 4 6 8 10 12 13 15 18 18 20 22 23 24 26 28 29 30 31 LCS_GDT G 47 G 47 4 7 23 4 4 4 6 8 10 12 13 15 18 18 20 20 22 23 26 28 29 29 31 LCS_GDT G 48 G 48 3 7 23 0 3 4 5 8 9 12 13 15 18 18 20 22 23 24 26 28 29 30 31 LCS_GDT L 49 L 49 5 7 23 3 5 6 6 8 10 12 13 14 18 18 20 20 23 24 26 28 29 30 31 LCS_GDT E 50 E 50 5 7 26 4 5 6 6 8 10 12 13 15 18 18 20 22 23 24 26 28 29 30 31 LCS_GDT K 51 K 51 5 7 27 4 5 6 6 8 10 12 13 15 18 18 21 24 24 24 26 28 29 30 31 LCS_GDT T 52 T 52 5 7 27 4 5 6 8 11 13 14 18 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT F 53 F 53 5 7 27 4 5 6 8 9 11 13 18 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT R 54 R 54 3 7 27 3 4 6 8 11 14 16 19 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT L 55 L 55 3 7 27 3 4 5 8 9 11 12 16 19 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT Q 56 Q 56 3 7 27 3 3 5 8 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT A 57 A 57 8 12 27 3 7 8 10 12 14 17 19 20 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT Q 58 Q 58 8 12 27 3 7 8 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT Q 59 Q 59 8 12 27 3 7 8 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT Y 60 Y 60 8 12 27 4 7 8 10 12 13 17 19 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT H 61 H 61 8 13 27 4 7 8 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT A 62 A 62 8 13 27 4 7 8 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 30 LCS_GDT L 63 L 63 8 13 27 4 7 8 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 30 LCS_GDT T 64 T 64 8 13 27 4 6 8 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 30 LCS_GDT V 65 V 65 7 13 27 4 6 7 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 30 LCS_GDT G 66 G 66 7 13 27 4 6 7 10 12 14 17 19 21 22 23 23 24 24 24 26 26 27 30 30 LCS_GDT D 67 D 67 7 13 27 4 6 7 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 30 LCS_GDT Q 68 Q 68 7 13 27 4 6 8 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 30 LCS_GDT G 69 G 69 5 13 27 4 5 6 9 11 14 17 19 21 22 23 23 24 24 24 26 28 29 30 30 LCS_GDT T 70 T 70 5 13 27 4 5 6 8 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 30 LCS_GDT L 71 L 71 5 13 27 4 5 6 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT S 72 S 72 5 13 27 4 5 6 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 31 LCS_GDT Y 73 Y 73 5 13 27 3 5 6 10 12 14 17 19 21 22 23 23 24 24 24 26 26 27 30 31 LCS_GDT K 74 K 74 4 7 27 3 3 4 6 7 12 14 17 21 22 23 23 24 24 24 26 26 27 30 31 LCS_GDT G 75 G 75 4 5 27 3 3 4 4 5 6 8 10 11 13 14 20 20 22 24 25 26 27 29 31 LCS_GDT T 76 T 76 4 6 27 3 3 6 8 9 10 12 12 13 18 18 19 22 23 24 25 26 27 29 31 LCS_GDT R 77 R 77 4 6 27 3 3 6 8 9 10 12 13 14 18 18 20 20 22 23 25 26 27 29 31 LCS_GDT F 78 F 78 4 6 27 3 4 4 4 9 10 12 13 14 18 18 20 20 22 23 25 26 27 29 31 LCS_GDT V 79 V 79 4 6 14 3 4 6 8 9 10 11 13 14 18 18 20 20 22 23 25 26 27 29 31 LCS_GDT G 80 G 80 4 6 11 3 4 6 8 9 10 11 13 14 18 18 20 20 22 23 25 26 27 29 31 LCS_GDT F 81 F 81 4 6 11 3 4 5 8 9 10 11 12 14 18 18 20 20 22 23 25 26 27 29 31 LCS_GDT V 82 V 82 3 4 11 3 3 4 4 4 4 7 7 13 18 18 20 20 22 23 25 26 27 29 31 LCS_GDT S 83 S 83 3 4 11 3 3 4 4 4 4 9 10 12 14 16 20 20 22 23 25 26 27 29 31 LCS_AVERAGE LCS_A: 20.82 ( 8.35 14.44 39.66 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 7 8 10 12 14 17 19 21 22 23 23 24 24 24 26 28 29 30 31 GDT PERCENT_AT 6.56 11.48 13.11 16.39 19.67 22.95 27.87 31.15 34.43 36.07 37.70 37.70 39.34 39.34 39.34 42.62 45.90 47.54 49.18 50.82 GDT RMS_LOCAL 0.16 0.61 0.85 1.14 1.59 2.08 2.48 2.70 3.18 3.17 3.35 3.35 3.87 3.87 3.68 5.03 5.88 6.03 6.30 7.14 GDT RMS_ALL_AT 15.73 13.80 13.96 15.06 14.46 12.53 12.59 12.36 11.69 11.98 11.74 11.74 11.39 11.39 11.87 10.75 10.56 10.61 10.35 12.11 # Checking swapping # possible swapping detected: F 42 F 42 # possible swapping detected: F 53 F 53 # possible swapping detected: Y 60 Y 60 # possible swapping detected: F 81 F 81 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA F 42 F 42 16.088 0 0.276 0.384 16.729 0.000 0.000 LGA K 43 K 43 19.487 0 0.589 0.851 27.772 0.000 0.000 LGA P 44 P 44 16.829 0 0.629 0.793 19.977 0.000 0.000 LGA L 45 L 45 19.837 0 0.086 0.205 23.772 0.000 0.000 LGA N 46 N 46 23.143 0 0.303 1.221 25.507 0.000 0.000 LGA G 47 G 47 25.484 0 0.580 0.580 25.484 0.000 0.000 LGA G 48 G 48 22.202 0 0.645 0.645 23.123 0.000 0.000 LGA L 49 L 49 21.594 0 0.605 1.509 25.008 0.000 0.000 LGA E 50 E 50 16.292 0 0.080 0.696 18.288 0.000 0.000 LGA K 51 K 51 12.329 0 0.078 1.016 19.207 0.000 0.000 LGA T 52 T 52 7.062 0 0.588 0.887 8.949 15.119 12.245 LGA F 53 F 53 5.769 0 0.037 0.568 10.587 19.524 8.442 LGA R 54 R 54 4.211 0 0.091 1.270 14.529 35.714 18.052 LGA L 55 L 55 5.529 0 0.525 1.032 12.378 36.548 19.167 LGA Q 56 Q 56 3.320 0 0.368 1.024 11.569 62.143 30.899 LGA A 57 A 57 3.443 0 0.629 0.611 6.164 59.286 50.857 LGA Q 58 Q 58 1.430 0 0.670 0.629 3.046 67.262 71.534 LGA Q 59 Q 59 2.892 0 0.103 1.094 7.401 62.857 43.175 LGA Y 60 Y 60 3.600 0 0.119 1.481 15.400 48.452 19.802 LGA H 61 H 61 3.516 0 0.117 1.181 4.964 45.476 41.810 LGA A 62 A 62 2.287 0 0.123 0.121 3.664 61.429 62.095 LGA L 63 L 63 1.873 0 0.143 0.849 4.302 65.119 61.548 LGA T 64 T 64 2.384 0 0.131 1.037 3.794 75.238 65.510 LGA V 65 V 65 2.467 0 0.101 0.176 4.267 70.952 57.347 LGA G 66 G 66 2.096 0 0.037 0.037 2.737 62.857 62.857 LGA D 67 D 67 1.736 0 0.354 0.552 2.396 68.810 71.905 LGA Q 68 Q 68 3.277 0 0.082 0.877 10.538 57.500 30.582 LGA G 69 G 69 2.363 0 0.300 0.300 2.363 79.643 79.643 LGA T 70 T 70 2.421 0 0.071 1.030 5.136 60.952 50.204 LGA L 71 L 71 1.851 0 0.058 1.354 4.033 70.833 64.524 LGA S 72 S 72 2.657 0 0.203 0.683 3.709 64.881 58.810 LGA Y 73 Y 73 1.399 0 0.598 1.388 4.415 60.357 58.611 LGA K 74 K 74 5.817 0 0.555 0.807 7.173 20.476 26.032 LGA G 75 G 75 10.189 0 0.373 0.373 10.189 1.429 1.429 LGA T 76 T 76 8.317 0 0.643 0.847 9.449 5.595 4.490 LGA R 77 R 77 11.032 0 0.144 1.015 18.232 0.000 0.000 LGA F 78 F 78 11.428 0 0.210 1.394 13.736 0.000 0.173 LGA V 79 V 79 17.353 0 0.572 0.980 21.439 0.000 0.000 LGA G 80 G 80 18.632 0 0.066 0.066 18.632 0.000 0.000 LGA F 81 F 81 18.233 0 0.154 0.956 20.842 0.000 0.000 LGA V 82 V 82 20.118 0 0.130 1.096 24.337 0.000 0.000 LGA S 83 S 83 21.040 0 0.189 0.256 22.243 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 42 168 168 100.00 330 330 100.00 61 SUMMARY(RMSD_GDC): 9.780 9.747 10.566 20.958 17.570 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 42 61 4.0 19 2.70 25.410 23.721 0.678 LGA_LOCAL RMSD: 2.704 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.361 Number of assigned atoms: 42 Std_ASGN_ATOMS RMSD: 9.780 Standard rmsd on all 42 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.236060 * X + -0.208172 * Y + 0.949179 * Z + -2.913481 Y_new = -0.776657 * X + 0.546635 * Y + 0.313041 * Z + -6.977590 Z_new = -0.584020 * X + -0.811082 * Y + -0.032640 * Z + -0.006634 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.275725 0.623673 -1.611017 [DEG: -73.0937 35.7338 -92.3045 ] ZXZ: 1.889365 1.603442 -2.517536 [DEG: 108.2527 91.8705 -144.2442 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0564TS171_1-D1 REMARK 2: T0564-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0564TS171_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 42 61 4.0 19 2.70 23.721 9.78 REMARK ---------------------------------------------------------- MOLECULE T0564TS171_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0564 REMARK MODEL 1 REMARK PARENT 1xne_A ATOM 1 N PHE 42 0.322 -10.586 -11.439 1.00 0.00 N ATOM 2 CA PHE 42 0.757 -11.680 -10.541 1.00 0.00 C ATOM 3 CB PHE 42 1.459 -11.111 -9.299 1.00 0.00 C ATOM 4 CG PHE 42 2.722 -10.505 -9.796 1.00 0.00 C ATOM 5 CD1 PHE 42 2.706 -9.276 -10.416 1.00 0.00 C ATOM 6 CD2 PHE 42 3.916 -11.167 -9.642 1.00 0.00 C ATOM 7 CE1 PHE 42 3.872 -8.718 -10.877 1.00 0.00 C ATOM 8 CE2 PHE 42 5.087 -10.613 -10.101 1.00 0.00 C ATOM 9 CZ PHE 42 5.061 -9.388 -10.723 1.00 0.00 C ATOM 10 C PHE 42 -0.385 -12.526 -10.099 1.00 0.00 C ATOM 11 O PHE 42 -1.522 -12.339 -10.528 1.00 0.00 O ATOM 12 N LYS 43 -0.087 -13.505 -9.231 1.00 0.00 N ATOM 13 CA LYS 43 -1.096 -14.385 -8.736 1.00 0.00 C ATOM 14 CB LYS 43 -0.506 -15.482 -7.827 1.00 0.00 C ATOM 15 CG LYS 43 -1.514 -16.520 -7.332 1.00 0.00 C ATOM 16 CD LYS 43 -0.843 -17.775 -6.771 1.00 0.00 C ATOM 17 CE LYS 43 0.005 -17.509 -5.525 1.00 0.00 C ATOM 18 NZ LYS 43 0.677 -18.755 -5.088 1.00 0.00 N ATOM 19 C LYS 43 -2.091 -13.578 -7.957 1.00 0.00 C ATOM 20 O LYS 43 -3.295 -13.751 -8.145 1.00 0.00 O ATOM 21 N PRO 44 -1.664 -12.683 -7.102 1.00 0.00 N ATOM 22 CA PRO 44 -2.609 -11.930 -6.324 1.00 0.00 C ATOM 23 CD PRO 44 -0.377 -12.800 -6.430 1.00 0.00 C ATOM 24 CB PRO 44 -1.783 -11.171 -5.287 1.00 0.00 C ATOM 25 CG PRO 44 -0.544 -12.064 -5.090 1.00 0.00 C ATOM 26 C PRO 44 -3.481 -11.050 -7.157 1.00 0.00 C ATOM 27 O PRO 44 -4.646 -10.865 -6.809 1.00 0.00 O ATOM 28 N LEU 45 -2.939 -10.489 -8.248 1.00 0.00 N ATOM 29 CA LEU 45 -3.689 -9.623 -9.108 1.00 0.00 C ATOM 30 CB LEU 45 -2.822 -9.057 -10.245 1.00 0.00 C ATOM 31 CG LEU 45 -1.623 -8.233 -9.744 1.00 0.00 C ATOM 32 CD1 LEU 45 -0.831 -7.611 -10.908 1.00 0.00 C ATOM 33 CD2 LEU 45 -2.064 -7.208 -8.689 1.00 0.00 C ATOM 34 C LEU 45 -4.741 -10.457 -9.752 1.00 0.00 C ATOM 35 O LEU 45 -5.898 -10.065 -9.879 1.00 0.00 O ATOM 36 N ASN 46 -4.320 -11.665 -10.154 1.00 0.00 N ATOM 37 CA ASN 46 -5.137 -12.585 -10.875 1.00 0.00 C ATOM 38 CB ASN 46 -4.380 -13.879 -11.213 1.00 0.00 C ATOM 39 CG ASN 46 -5.229 -14.675 -12.189 1.00 0.00 C ATOM 40 OD1 ASN 46 -6.208 -14.172 -12.740 1.00 0.00 O ATOM 41 ND2 ASN 46 -4.849 -15.962 -12.406 1.00 0.00 N ATOM 42 C ASN 46 -6.310 -12.963 -10.039 1.00 0.00 C ATOM 43 O ASN 46 -7.437 -13.008 -10.528 1.00 0.00 O ATOM 44 N GLY 47 -6.080 -13.224 -8.739 1.00 0.00 N ATOM 45 CA GLY 47 -7.162 -13.654 -7.908 1.00 0.00 C ATOM 46 C GLY 47 -8.190 -12.577 -7.929 1.00 0.00 C ATOM 47 O GLY 47 -9.385 -12.847 -8.044 1.00 0.00 O ATOM 48 N GLY 48 -7.753 -11.313 -7.843 1.00 0.00 N ATOM 49 CA GLY 48 -8.733 -10.273 -7.863 1.00 0.00 C ATOM 50 C GLY 48 -9.264 -10.136 -6.475 1.00 0.00 C ATOM 51 O GLY 48 -10.286 -9.491 -6.248 1.00 0.00 O ATOM 52 N LEU 49 -8.569 -10.744 -5.499 1.00 0.00 N ATOM 53 CA LEU 49 -8.986 -10.648 -4.133 1.00 0.00 C ATOM 54 CB LEU 49 -8.078 -11.436 -3.172 1.00 0.00 C ATOM 55 CG LEU 49 -8.501 -11.328 -1.691 1.00 0.00 C ATOM 56 CD1 LEU 49 -9.883 -11.957 -1.445 1.00 0.00 C ATOM 57 CD2 LEU 49 -7.415 -11.881 -0.750 1.00 0.00 C ATOM 58 C LEU 49 -8.898 -9.206 -3.751 1.00 0.00 C ATOM 59 O LEU 49 -9.732 -8.695 -3.006 1.00 0.00 O ATOM 60 N GLU 50 -7.879 -8.509 -4.284 1.00 0.00 N ATOM 61 CA GLU 50 -7.601 -7.140 -3.952 1.00 0.00 C ATOM 62 CB GLU 50 -6.323 -6.593 -4.600 1.00 0.00 C ATOM 63 CG GLU 50 -6.441 -6.497 -6.126 1.00 0.00 C ATOM 64 CD GLU 50 -5.194 -5.817 -6.670 1.00 0.00 C ATOM 65 OE1 GLU 50 -4.771 -4.787 -6.086 1.00 0.00 O ATOM 66 OE2 GLU 50 -4.653 -6.321 -7.692 1.00 0.00 O ATOM 67 C GLU 50 -8.657 -6.225 -4.472 1.00 0.00 C ATOM 68 O GLU 50 -9.320 -6.505 -5.468 1.00 0.00 O ATOM 69 N LYS 51 -8.836 -5.102 -3.746 1.00 0.00 N ATOM 70 CA LYS 51 -9.647 -3.989 -4.146 1.00 0.00 C ATOM 71 CB LYS 51 -10.971 -3.870 -3.370 1.00 0.00 C ATOM 72 CG LYS 51 -11.906 -2.774 -3.892 1.00 0.00 C ATOM 73 CD LYS 51 -13.311 -2.854 -3.291 1.00 0.00 C ATOM 74 CE LYS 51 -14.258 -1.761 -3.786 1.00 0.00 C ATOM 75 NZ LYS 51 -14.810 -2.133 -5.107 1.00 0.00 N ATOM 76 C LYS 51 -8.812 -2.800 -3.785 1.00 0.00 C ATOM 77 O LYS 51 -8.642 -2.488 -2.608 1.00 0.00 O ATOM 78 N THR 52 -8.245 -2.115 -4.794 1.00 0.00 N ATOM 79 CA THR 52 -7.356 -1.020 -4.532 1.00 0.00 C ATOM 80 CB THR 52 -6.610 -0.553 -5.749 1.00 0.00 C ATOM 81 OG1 THR 52 -7.516 -0.088 -6.737 1.00 0.00 O ATOM 82 CG2 THR 52 -5.767 -1.723 -6.292 1.00 0.00 C ATOM 83 C THR 52 -8.088 0.151 -3.950 1.00 0.00 C ATOM 84 O THR 52 -7.570 0.816 -3.053 1.00 0.00 O ATOM 85 N PHE 53 -9.315 0.436 -4.422 1.00 0.00 N ATOM 86 CA PHE 53 -9.987 1.630 -3.984 1.00 0.00 C ATOM 87 CB PHE 53 -10.951 2.200 -5.037 1.00 0.00 C ATOM 88 CG PHE 53 -10.106 3.005 -5.960 1.00 0.00 C ATOM 89 CD1 PHE 53 -9.097 2.418 -6.685 1.00 0.00 C ATOM 90 CD2 PHE 53 -10.344 4.351 -6.115 1.00 0.00 C ATOM 91 CE1 PHE 53 -8.321 3.171 -7.535 1.00 0.00 C ATOM 92 CE2 PHE 53 -9.573 5.108 -6.964 1.00 0.00 C ATOM 93 CZ PHE 53 -8.557 4.517 -7.675 1.00 0.00 C ATOM 94 C PHE 53 -10.741 1.460 -2.705 1.00 0.00 C ATOM 95 O PHE 53 -11.408 0.453 -2.471 1.00 0.00 O ATOM 96 N ARG 54 -10.588 2.481 -1.834 1.00 0.00 N ATOM 97 CA ARG 54 -11.270 2.669 -0.583 1.00 0.00 C ATOM 98 CB ARG 54 -10.931 1.625 0.499 1.00 0.00 C ATOM 99 CG ARG 54 -11.605 0.268 0.291 1.00 0.00 C ATOM 100 CD ARG 54 -13.070 0.244 0.737 1.00 0.00 C ATOM 101 NE ARG 54 -13.109 0.194 2.226 1.00 0.00 N ATOM 102 CZ ARG 54 -13.279 -1.007 2.855 1.00 0.00 C ATOM 103 NH1 ARG 54 -13.376 -2.154 2.121 1.00 0.00 N ATOM 104 NH2 ARG 54 -13.358 -1.065 4.217 1.00 0.00 N ATOM 105 C ARG 54 -10.750 3.976 -0.073 1.00 0.00 C ATOM 106 O ARG 54 -9.548 4.226 -0.164 1.00 0.00 O ATOM 107 N LEU 55 -11.613 4.862 0.466 1.00 0.00 N ATOM 108 CA LEU 55 -11.027 6.087 0.924 1.00 0.00 C ATOM 109 CB LEU 55 -12.040 7.132 1.437 1.00 0.00 C ATOM 110 CG LEU 55 -12.885 7.828 0.345 1.00 0.00 C ATOM 111 CD1 LEU 55 -13.829 6.859 -0.387 1.00 0.00 C ATOM 112 CD2 LEU 55 -13.629 9.038 0.932 1.00 0.00 C ATOM 113 C LEU 55 -10.105 5.757 2.050 1.00 0.00 C ATOM 114 O LEU 55 -8.923 6.091 2.021 1.00 0.00 O ATOM 115 N GLN 56 -10.606 5.043 3.070 1.00 0.00 N ATOM 116 CA GLN 56 -9.716 4.733 4.145 1.00 0.00 C ATOM 117 CB GLN 56 -9.674 5.833 5.217 1.00 0.00 C ATOM 118 CG GLN 56 -9.114 7.168 4.723 1.00 0.00 C ATOM 119 CD GLN 56 -9.234 8.152 5.874 1.00 0.00 C ATOM 120 OE1 GLN 56 -9.664 7.778 6.965 1.00 0.00 O ATOM 121 NE2 GLN 56 -8.857 9.437 5.630 1.00 0.00 N ATOM 122 C GLN 56 -10.249 3.524 4.821 1.00 0.00 C ATOM 123 O GLN 56 -10.862 3.615 5.882 1.00 0.00 O ATOM 124 N ALA 57 -9.993 2.337 4.258 1.00 0.00 N ATOM 125 CA ALA 57 -10.511 1.184 4.920 1.00 0.00 C ATOM 126 CB ALA 57 -10.338 -0.113 4.114 1.00 0.00 C ATOM 127 C ALA 57 -9.738 1.055 6.183 1.00 0.00 C ATOM 128 O ALA 57 -8.602 1.519 6.279 1.00 0.00 O ATOM 129 N GLN 58 -10.360 0.447 7.207 1.00 0.00 N ATOM 130 CA GLN 58 -9.670 0.274 8.443 1.00 0.00 C ATOM 131 CB GLN 58 -10.592 -0.131 9.610 1.00 0.00 C ATOM 132 CG GLN 58 -11.607 0.968 9.950 1.00 0.00 C ATOM 133 CD GLN 58 -12.466 0.508 11.119 1.00 0.00 C ATOM 134 OE1 GLN 58 -12.226 -0.533 11.726 1.00 0.00 O ATOM 135 NE2 GLN 58 -13.502 1.323 11.453 1.00 0.00 N ATOM 136 C GLN 58 -8.664 -0.791 8.196 1.00 0.00 C ATOM 137 O GLN 58 -8.895 -1.690 7.395 1.00 0.00 O ATOM 138 N GLN 59 -7.502 -0.649 8.865 1.00 0.00 N ATOM 139 CA GLN 59 -6.316 -1.461 8.832 1.00 0.00 C ATOM 140 CB GLN 59 -6.538 -2.989 8.980 1.00 0.00 C ATOM 141 CG GLN 59 -7.124 -3.723 7.768 1.00 0.00 C ATOM 142 CD GLN 59 -7.632 -5.081 8.236 1.00 0.00 C ATOM 143 OE1 GLN 59 -8.300 -5.168 9.265 1.00 0.00 O ATOM 144 NE2 GLN 59 -7.323 -6.161 7.471 1.00 0.00 N ATOM 145 C GLN 59 -5.638 -1.218 7.525 1.00 0.00 C ATOM 146 O GLN 59 -4.434 -1.429 7.395 1.00 0.00 O ATOM 147 N TYR 60 -6.395 -0.755 6.509 1.00 0.00 N ATOM 148 CA TYR 60 -5.755 -0.355 5.291 1.00 0.00 C ATOM 149 CB TYR 60 -6.732 -0.150 4.116 1.00 0.00 C ATOM 150 CG TYR 60 -7.151 -1.451 3.516 1.00 0.00 C ATOM 151 CD1 TYR 60 -8.051 -2.293 4.131 1.00 0.00 C ATOM 152 CD2 TYR 60 -6.644 -1.806 2.287 1.00 0.00 C ATOM 153 CE1 TYR 60 -8.418 -3.479 3.533 1.00 0.00 C ATOM 154 CE2 TYR 60 -7.006 -2.984 1.686 1.00 0.00 C ATOM 155 CZ TYR 60 -7.892 -3.825 2.309 1.00 0.00 C ATOM 156 OH TYR 60 -8.263 -5.036 1.689 1.00 0.00 O ATOM 157 C TYR 60 -5.108 0.971 5.532 1.00 0.00 C ATOM 158 O TYR 60 -3.921 1.171 5.275 1.00 0.00 O ATOM 159 N HIS 61 -5.898 1.891 6.119 1.00 0.00 N ATOM 160 CA HIS 61 -5.507 3.256 6.312 1.00 0.00 C ATOM 161 ND1 HIS 61 -6.616 4.411 9.425 1.00 0.00 N ATOM 162 CG HIS 61 -7.035 3.766 8.286 1.00 0.00 C ATOM 163 CB HIS 61 -6.621 4.144 6.896 1.00 0.00 C ATOM 164 NE2 HIS 61 -7.972 2.777 10.082 1.00 0.00 N ATOM 165 CD2 HIS 61 -7.863 2.770 8.704 1.00 0.00 C ATOM 166 CE1 HIS 61 -7.206 3.779 10.473 1.00 0.00 C ATOM 167 C HIS 61 -4.342 3.284 7.235 1.00 0.00 C ATOM 168 O HIS 61 -3.506 4.182 7.167 1.00 0.00 O ATOM 169 N ALA 62 -4.248 2.274 8.112 1.00 0.00 N ATOM 170 CA ALA 62 -3.210 2.237 9.096 1.00 0.00 C ATOM 171 CB ALA 62 -3.221 0.942 9.931 1.00 0.00 C ATOM 172 C ALA 62 -1.889 2.308 8.395 1.00 0.00 C ATOM 173 O ALA 62 -0.955 2.930 8.895 1.00 0.00 O ATOM 174 N LEU 63 -1.774 1.682 7.210 1.00 0.00 N ATOM 175 CA LEU 63 -0.496 1.666 6.556 1.00 0.00 C ATOM 176 CB LEU 63 -0.505 0.916 5.213 1.00 0.00 C ATOM 177 CG LEU 63 0.882 0.877 4.548 1.00 0.00 C ATOM 178 CD1 LEU 63 1.842 -0.013 5.352 1.00 0.00 C ATOM 179 CD2 LEU 63 0.797 0.491 3.062 1.00 0.00 C ATOM 180 C LEU 63 -0.075 3.070 6.255 1.00 0.00 C ATOM 181 O LEU 63 -0.842 3.862 5.709 1.00 0.00 O ATOM 182 N THR 64 1.179 3.414 6.617 1.00 0.00 N ATOM 183 CA THR 64 1.701 4.719 6.333 1.00 0.00 C ATOM 184 CB THR 64 1.670 5.666 7.509 1.00 0.00 C ATOM 185 OG1 THR 64 2.439 5.154 8.587 1.00 0.00 O ATOM 186 CG2 THR 64 0.210 5.875 7.946 1.00 0.00 C ATOM 187 C THR 64 3.126 4.551 5.906 1.00 0.00 C ATOM 188 O THR 64 3.722 3.494 6.105 1.00 0.00 O ATOM 189 N VAL 65 3.698 5.596 5.276 1.00 0.00 N ATOM 190 CA VAL 65 5.060 5.520 4.836 1.00 0.00 C ATOM 191 CB VAL 65 5.463 6.612 3.885 1.00 0.00 C ATOM 192 CG1 VAL 65 6.950 6.431 3.526 1.00 0.00 C ATOM 193 CG2 VAL 65 4.531 6.582 2.667 1.00 0.00 C ATOM 194 C VAL 65 5.924 5.677 6.039 1.00 0.00 C ATOM 195 O VAL 65 5.565 6.366 6.990 1.00 0.00 O ATOM 196 N GLY 66 7.099 5.022 6.024 1.00 0.00 N ATOM 197 CA GLY 66 8.015 5.135 7.117 1.00 0.00 C ATOM 198 C GLY 66 8.047 3.846 7.873 1.00 0.00 C ATOM 199 O GLY 66 9.042 3.545 8.533 1.00 0.00 O ATOM 200 N ASP 67 6.975 3.039 7.799 1.00 0.00 N ATOM 201 CA ASP 67 7.016 1.783 8.492 1.00 0.00 C ATOM 202 CB ASP 67 5.644 1.105 8.645 1.00 0.00 C ATOM 203 CG ASP 67 5.794 -0.044 9.634 1.00 0.00 C ATOM 204 OD1 ASP 67 6.842 -0.087 10.335 1.00 0.00 O ATOM 205 OD2 ASP 67 4.867 -0.893 9.699 1.00 0.00 O ATOM 206 C ASP 67 7.855 0.904 7.631 1.00 0.00 C ATOM 207 O ASP 67 8.319 1.342 6.583 1.00 0.00 O ATOM 208 N GLN 68 8.123 -0.343 8.061 1.00 0.00 N ATOM 209 CA GLN 68 8.860 -1.171 7.156 1.00 0.00 C ATOM 210 CB GLN 68 9.185 -2.557 7.737 1.00 0.00 C ATOM 211 CG GLN 68 10.070 -3.441 6.857 1.00 0.00 C ATOM 212 CD GLN 68 10.419 -4.656 7.705 1.00 0.00 C ATOM 213 OE1 GLN 68 10.844 -5.702 7.215 1.00 0.00 O ATOM 214 NE2 GLN 68 10.227 -4.511 9.043 1.00 0.00 N ATOM 215 C GLN 68 7.934 -1.331 6.003 1.00 0.00 C ATOM 216 O GLN 68 6.943 -2.057 6.086 1.00 0.00 O ATOM 217 N GLY 69 8.249 -0.645 4.888 1.00 0.00 N ATOM 218 CA GLY 69 7.358 -0.632 3.775 1.00 0.00 C ATOM 219 C GLY 69 7.162 -2.032 3.328 1.00 0.00 C ATOM 220 O GLY 69 7.999 -2.610 2.641 1.00 0.00 O ATOM 221 N THR 70 6.011 -2.607 3.704 1.00 0.00 N ATOM 222 CA THR 70 5.742 -3.925 3.246 1.00 0.00 C ATOM 223 CB THR 70 5.489 -4.930 4.332 1.00 0.00 C ATOM 224 OG1 THR 70 4.337 -4.576 5.082 1.00 0.00 O ATOM 225 CG2 THR 70 6.727 -4.991 5.242 1.00 0.00 C ATOM 226 C THR 70 4.506 -3.800 2.443 1.00 0.00 C ATOM 227 O THR 70 3.496 -3.276 2.908 1.00 0.00 O ATOM 228 N LEU 71 4.575 -4.252 1.185 1.00 0.00 N ATOM 229 CA LEU 71 3.411 -4.181 0.371 1.00 0.00 C ATOM 230 CB LEU 71 3.687 -3.823 -1.097 1.00 0.00 C ATOM 231 CG LEU 71 4.166 -2.388 -1.339 1.00 0.00 C ATOM 232 CD1 LEU 71 4.379 -2.136 -2.842 1.00 0.00 C ATOM 233 CD2 LEU 71 3.196 -1.378 -0.708 1.00 0.00 C ATOM 234 C LEU 71 2.854 -5.550 0.325 1.00 0.00 C ATOM 235 O LEU 71 3.486 -6.460 -0.209 1.00 0.00 O ATOM 236 N SER 72 1.655 -5.747 0.898 1.00 0.00 N ATOM 237 CA SER 72 1.105 -7.047 0.698 1.00 0.00 C ATOM 238 CB SER 72 -0.262 -7.289 1.349 1.00 0.00 C ATOM 239 OG SER 72 -0.685 -8.616 1.061 1.00 0.00 O ATOM 240 C SER 72 0.878 -7.074 -0.765 1.00 0.00 C ATOM 241 O SER 72 0.474 -6.071 -1.348 1.00 0.00 O ATOM 242 N TYR 73 1.161 -8.209 -1.417 1.00 0.00 N ATOM 243 CA TYR 73 0.979 -8.134 -2.826 1.00 0.00 C ATOM 244 CB TYR 73 1.485 -9.328 -3.646 1.00 0.00 C ATOM 245 CG TYR 73 1.624 -8.704 -4.991 1.00 0.00 C ATOM 246 CD1 TYR 73 0.596 -8.681 -5.907 1.00 0.00 C ATOM 247 CD2 TYR 73 2.811 -8.084 -5.306 1.00 0.00 C ATOM 248 CE1 TYR 73 0.779 -8.069 -7.127 1.00 0.00 C ATOM 249 CE2 TYR 73 3.002 -7.472 -6.521 1.00 0.00 C ATOM 250 CZ TYR 73 1.981 -7.473 -7.436 1.00 0.00 C ATOM 251 OH TYR 73 2.165 -6.850 -8.687 1.00 0.00 O ATOM 252 C TYR 73 -0.485 -7.983 -3.064 1.00 0.00 C ATOM 253 O TYR 73 -0.894 -7.258 -3.970 1.00 0.00 O ATOM 254 N LYS 74 -1.308 -8.641 -2.220 1.00 0.00 N ATOM 255 CA LYS 74 -2.732 -8.658 -2.406 1.00 0.00 C ATOM 256 CB LYS 74 -3.495 -9.252 -1.203 1.00 0.00 C ATOM 257 CG LYS 74 -3.214 -10.729 -0.907 1.00 0.00 C ATOM 258 CD LYS 74 -3.611 -11.671 -2.045 1.00 0.00 C ATOM 259 CE LYS 74 -3.277 -13.147 -1.801 1.00 0.00 C ATOM 260 NZ LYS 74 -3.837 -13.603 -0.508 1.00 0.00 N ATOM 261 C LYS 74 -3.198 -7.248 -2.500 1.00 0.00 C ATOM 262 O LYS 74 -3.850 -6.864 -3.467 1.00 0.00 O ATOM 263 N GLY 75 -2.832 -6.405 -1.525 1.00 0.00 N ATOM 264 CA GLY 75 -3.332 -5.073 -1.636 1.00 0.00 C ATOM 265 C GLY 75 -2.173 -4.150 -1.614 1.00 0.00 C ATOM 266 O GLY 75 -1.259 -4.297 -0.805 1.00 0.00 O ATOM 267 N THR 76 -2.193 -3.153 -2.514 1.00 0.00 N ATOM 268 CA THR 76 -1.135 -2.197 -2.523 1.00 0.00 C ATOM 269 CB THR 76 -0.510 -1.998 -3.870 1.00 0.00 C ATOM 270 OG1 THR 76 0.010 -3.220 -4.370 1.00 0.00 O ATOM 271 CG2 THR 76 0.614 -0.961 -3.716 1.00 0.00 C ATOM 272 C THR 76 -1.757 -0.897 -2.160 1.00 0.00 C ATOM 273 O THR 76 -2.844 -0.573 -2.637 1.00 0.00 O ATOM 274 N ARG 77 -1.091 -0.119 -1.283 1.00 0.00 N ATOM 275 CA ARG 77 -1.669 1.145 -0.955 1.00 0.00 C ATOM 276 CB ARG 77 -2.268 1.237 0.457 1.00 0.00 C ATOM 277 CG ARG 77 -3.060 2.535 0.614 1.00 0.00 C ATOM 278 CD ARG 77 -4.161 2.660 -0.447 1.00 0.00 C ATOM 279 NE ARG 77 -4.721 4.040 -0.396 1.00 0.00 N ATOM 280 CZ ARG 77 -4.982 4.703 -1.563 1.00 0.00 C ATOM 281 NH1 ARG 77 -4.668 4.126 -2.760 1.00 0.00 N ATOM 282 NH2 ARG 77 -5.542 5.950 -1.531 1.00 0.00 N ATOM 283 C ARG 77 -0.633 2.210 -1.072 1.00 0.00 C ATOM 284 O ARG 77 0.543 2.008 -0.775 1.00 0.00 O ATOM 285 N PHE 78 -1.082 3.391 -1.528 1.00 0.00 N ATOM 286 CA PHE 78 -0.233 4.525 -1.716 1.00 0.00 C ATOM 287 CB PHE 78 0.167 4.760 -3.186 1.00 0.00 C ATOM 288 CG PHE 78 1.325 3.875 -3.500 1.00 0.00 C ATOM 289 CD1 PHE 78 1.152 2.562 -3.865 1.00 0.00 C ATOM 290 CD2 PHE 78 2.605 4.374 -3.414 1.00 0.00 C ATOM 291 CE1 PHE 78 2.242 1.767 -4.142 1.00 0.00 C ATOM 292 CE2 PHE 78 3.698 3.584 -3.690 1.00 0.00 C ATOM 293 CZ PHE 78 3.516 2.275 -4.062 1.00 0.00 C ATOM 294 C PHE 78 -0.970 5.734 -1.258 1.00 0.00 C ATOM 295 O PHE 78 -2.117 5.666 -0.817 1.00 0.00 O ATOM 296 N VAL 79 -0.280 6.884 -1.321 1.00 0.00 N ATOM 297 CA VAL 79 -0.869 8.135 -0.970 1.00 0.00 C ATOM 298 CB VAL 79 0.057 9.011 -0.175 1.00 0.00 C ATOM 299 CG1 VAL 79 1.334 9.254 -0.997 1.00 0.00 C ATOM 300 CG2 VAL 79 -0.683 10.302 0.207 1.00 0.00 C ATOM 301 C VAL 79 -1.168 8.805 -2.269 1.00 0.00 C ATOM 302 O VAL 79 -0.459 8.597 -3.253 1.00 0.00 O ATOM 303 N GLY 80 -2.252 9.602 -2.324 1.00 0.00 N ATOM 304 CA GLY 80 -2.599 10.244 -3.557 1.00 0.00 C ATOM 305 C GLY 80 -3.556 9.346 -4.269 1.00 0.00 C ATOM 306 O GLY 80 -3.757 8.197 -3.877 1.00 0.00 O ATOM 307 N PHE 81 -4.164 9.844 -5.362 1.00 0.00 N ATOM 308 CA PHE 81 -5.123 9.051 -6.074 1.00 0.00 C ATOM 309 CB PHE 81 -5.940 9.813 -7.134 1.00 0.00 C ATOM 310 CG PHE 81 -5.028 10.224 -8.229 1.00 0.00 C ATOM 311 CD1 PHE 81 -4.358 11.423 -8.164 1.00 0.00 C ATOM 312 CD2 PHE 81 -4.838 9.402 -9.314 1.00 0.00 C ATOM 313 CE1 PHE 81 -3.516 11.809 -9.177 1.00 0.00 C ATOM 314 CE2 PHE 81 -3.998 9.784 -10.330 1.00 0.00 C ATOM 315 CZ PHE 81 -3.332 10.985 -10.261 1.00 0.00 C ATOM 316 C PHE 81 -4.371 7.951 -6.736 1.00 0.00 C ATOM 317 O PHE 81 -3.143 7.959 -6.766 1.00 0.00 O ATOM 318 N VAL 82 -5.110 6.953 -7.258 1.00 0.00 N ATOM 319 CA VAL 82 -4.507 5.780 -7.817 1.00 0.00 C ATOM 320 CB VAL 82 -5.484 4.876 -8.517 1.00 0.00 C ATOM 321 CG1 VAL 82 -6.111 5.632 -9.703 1.00 0.00 C ATOM 322 CG2 VAL 82 -4.744 3.595 -8.939 1.00 0.00 C ATOM 323 C VAL 82 -3.455 6.156 -8.803 1.00 0.00 C ATOM 324 O VAL 82 -3.693 6.911 -9.742 1.00 0.00 O ATOM 325 N SER 83 -2.229 5.647 -8.560 1.00 0.00 N ATOM 326 CA SER 83 -1.138 5.871 -9.458 1.00 0.00 C ATOM 327 CB SER 83 0.177 6.287 -8.764 1.00 0.00 C ATOM 328 OG SER 83 1.209 6.477 -9.723 1.00 0.00 O ATOM 329 C SER 83 -0.892 4.535 -10.151 1.00 0.00 C ATOM 330 O SER 83 -0.230 3.658 -9.533 1.00 0.00 O ATOM 331 OXT SER 83 -1.376 4.368 -11.302 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 330 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 68.07 40.9 44 37.6 117 ARMSMC SECONDARY STRUCTURE . . 58.36 38.5 13 19.7 66 ARMSMC SURFACE . . . . . . . . 68.63 45.7 35 41.2 85 ARMSMC BURIED . . . . . . . . 65.86 22.2 9 28.1 32 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 100.90 26.7 15 32.6 46 ARMSSC1 RELIABLE SIDE CHAINS . 100.90 26.7 15 36.6 41 ARMSSC1 SECONDARY STRUCTURE . . 119.19 0.0 6 20.7 29 ARMSSC1 SURFACE . . . . . . . . 98.01 30.0 10 31.2 32 ARMSSC1 BURIED . . . . . . . . 106.45 20.0 5 35.7 14 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.29 42.9 7 25.9 27 ARMSSC2 RELIABLE SIDE CHAINS . 96.39 40.0 5 22.7 22 ARMSSC2 SECONDARY STRUCTURE . . 105.32 33.3 3 17.6 17 ARMSSC2 SURFACE . . . . . . . . 58.31 75.0 4 20.0 20 ARMSSC2 BURIED . . . . . . . . 127.33 0.0 3 42.9 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 7.27 100.0 1 5.9 17 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 12 ARMSSC3 SURFACE . . . . . . . . 7.27 100.0 1 7.1 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 5 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.78 (Number of atoms: 42) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.78 42 68.9 61 CRMSCA CRN = ALL/NP . . . . . 0.2329 CRMSCA SECONDARY STRUCTURE . . 10.36 19 57.6 33 CRMSCA SURFACE . . . . . . . . 10.32 32 71.1 45 CRMSCA BURIED . . . . . . . . 7.83 10 62.5 16 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.79 204 68.2 299 CRMSMC SECONDARY STRUCTURE . . 10.44 93 57.1 163 CRMSMC SURFACE . . . . . . . . 10.31 155 70.5 220 CRMSMC BURIED . . . . . . . . 7.95 49 62.0 79 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.39 162 21.7 745 CRMSSC RELIABLE SIDE CHAINS . 11.20 132 18.9 699 CRMSSC SECONDARY STRUCTURE . . 12.21 86 20.0 429 CRMSSC SURFACE . . . . . . . . 11.69 116 20.9 555 CRMSSC BURIED . . . . . . . . 10.59 46 24.2 190 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.59 330 33.4 989 CRMSALL SECONDARY STRUCTURE . . 11.39 162 28.9 561 CRMSALL SURFACE . . . . . . . . 10.97 244 33.2 735 CRMSALL BURIED . . . . . . . . 9.44 86 33.9 254 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.762 1.000 0.500 42 68.9 61 ERRCA SECONDARY STRUCTURE . . 8.716 1.000 0.500 19 57.6 33 ERRCA SURFACE . . . . . . . . 9.391 1.000 0.500 32 71.1 45 ERRCA BURIED . . . . . . . . 6.750 1.000 0.500 10 62.5 16 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.782 1.000 0.500 204 68.2 299 ERRMC SECONDARY STRUCTURE . . 8.869 1.000 0.500 93 57.1 163 ERRMC SURFACE . . . . . . . . 9.390 1.000 0.500 155 70.5 220 ERRMC BURIED . . . . . . . . 6.858 1.000 0.500 49 62.0 79 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.517 1.000 0.500 162 21.7 745 ERRSC RELIABLE SIDE CHAINS . 10.339 1.000 0.500 132 18.9 699 ERRSC SECONDARY STRUCTURE . . 11.074 1.000 0.500 86 20.0 429 ERRSC SURFACE . . . . . . . . 10.796 1.000 0.500 116 20.9 555 ERRSC BURIED . . . . . . . . 9.813 1.000 0.500 46 24.2 190 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.613 1.000 0.500 330 33.4 989 ERRALL SECONDARY STRUCTURE . . 10.012 1.000 0.500 162 28.9 561 ERRALL SURFACE . . . . . . . . 10.040 1.000 0.500 244 33.2 735 ERRALL BURIED . . . . . . . . 8.402 1.000 0.500 86 33.9 254 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 2 4 10 28 42 61 DISTCA CA (P) 0.00 3.28 6.56 16.39 45.90 61 DISTCA CA (RMS) 0.00 1.79 2.23 3.26 6.75 DISTCA ALL (N) 1 7 25 56 197 330 989 DISTALL ALL (P) 0.10 0.71 2.53 5.66 19.92 989 DISTALL ALL (RMS) 0.79 1.64 2.32 3.44 7.05 DISTALL END of the results output