####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # ERROR! Check molecule: 1 and the amino acid number 14 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 14 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 14 (molecule: 1) # Only one atom (first) is used for calculations. # Molecule1: number of CA atoms 76 ( 305), selected 57 , name T0564AL285_1-D1 # Molecule2: number of CA atoms 61 ( 989), selected 57 , name T0564-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0564AL285_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 50 - 64 4.38 18.60 LONGEST_CONTINUOUS_SEGMENT: 15 51 - 65 4.46 18.94 LCS_AVERAGE: 20.77 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 70 - 78 1.96 19.02 LCS_AVERAGE: 9.49 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 64 - 68 0.24 15.15 LCS_AVERAGE: 6.10 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 57 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 8 Q 8 4 7 10 4 4 5 6 6 8 8 10 11 11 11 12 13 15 16 18 22 23 25 28 LCS_GDT V 9 V 9 4 7 10 4 4 5 6 6 8 8 10 11 11 11 12 13 17 20 22 26 30 33 36 LCS_GDT V 10 V 10 4 7 10 4 4 5 6 6 8 8 10 11 11 12 13 16 22 25 26 28 31 33 36 LCS_GDT V 11 V 11 4 7 10 4 4 5 6 6 8 10 11 11 13 15 17 19 22 25 26 28 31 33 36 LCS_GDT S 12 S 12 4 7 10 0 3 5 6 6 8 10 11 12 15 16 18 19 22 25 26 28 31 33 36 LCS_GDT N 13 N 13 4 7 10 3 3 8 10 11 12 12 13 14 15 16 18 19 22 25 26 28 31 33 36 LCS_GDT K 14 K 14 4 7 10 3 4 7 10 11 12 12 13 14 15 16 18 19 22 25 26 28 31 33 36 LCS_GDT R 15 R 15 4 5 10 3 4 4 8 11 12 12 13 14 15 16 18 19 22 25 26 28 31 33 36 LCS_GDT E 16 E 16 4 5 10 3 4 7 10 11 12 12 13 14 15 16 18 19 20 22 24 27 31 32 35 LCS_GDT K 17 K 17 4 5 10 3 4 8 10 11 12 12 13 14 15 16 18 19 20 22 24 26 29 30 33 LCS_GDT R 37 R 37 4 4 8 3 3 4 4 4 4 4 4 4 5 9 11 12 12 14 16 18 18 20 21 LCS_GDT Y 38 Y 38 4 4 11 3 3 4 4 4 4 4 5 6 9 10 11 12 12 14 16 18 19 20 21 LCS_GDT E 39 E 39 4 4 11 3 3 4 4 4 5 6 6 7 9 10 11 12 12 14 16 18 19 20 21 LCS_GDT A 40 A 40 4 4 11 3 3 4 4 4 5 6 7 8 9 10 11 12 12 14 16 18 19 21 23 LCS_GDT S 41 S 41 3 3 11 3 3 3 3 4 5 6 7 8 9 10 11 12 12 14 16 18 19 26 26 LCS_GDT F 42 F 42 3 3 11 3 3 3 3 6 6 6 7 9 9 10 12 16 19 20 22 26 29 30 33 LCS_GDT K 43 K 43 3 3 12 3 3 3 3 6 6 6 8 9 12 13 15 18 19 20 23 28 30 33 36 LCS_GDT P 44 P 44 4 5 12 4 4 4 4 6 6 6 8 9 12 13 15 18 20 23 26 28 31 33 36 LCS_GDT L 45 L 45 4 5 12 4 4 4 4 6 7 8 9 11 13 15 17 19 22 25 26 28 31 33 36 LCS_GDT N 46 N 46 4 5 12 4 4 4 4 5 6 7 9 11 13 15 17 19 22 25 26 28 31 33 36 LCS_GDT G 47 G 47 4 5 12 4 4 4 4 6 7 8 9 11 13 15 17 19 22 25 26 28 31 33 36 LCS_GDT G 48 G 48 3 5 12 0 3 4 4 7 7 8 9 11 13 15 17 19 22 25 26 28 31 33 36 LCS_GDT L 49 L 49 3 4 12 1 3 4 4 7 7 7 8 11 15 16 17 19 22 25 26 28 31 33 36 LCS_GDT E 50 E 50 3 4 15 3 3 3 4 7 7 8 9 11 13 15 17 19 22 25 26 28 31 33 36 LCS_GDT K 51 K 51 3 3 15 3 3 3 3 7 7 9 12 12 15 16 17 19 22 25 26 28 31 33 36 LCS_GDT T 52 T 52 4 4 15 3 3 4 4 4 6 9 12 13 15 16 17 19 22 25 26 28 31 33 36 LCS_GDT F 53 F 53 4 4 15 5 5 8 10 11 12 12 13 14 15 16 18 19 22 25 26 28 31 33 36 LCS_GDT R 54 R 54 4 6 15 3 3 4 7 10 12 12 13 14 15 16 18 19 20 22 24 26 29 32 35 LCS_GDT L 55 L 55 4 6 15 3 3 4 5 5 6 9 12 12 13 13 14 16 19 21 22 26 29 30 33 LCS_GDT Q 56 Q 56 4 6 15 4 4 4 5 6 8 9 12 12 13 13 14 16 19 20 22 26 29 30 32 LCS_GDT A 57 A 57 4 6 15 4 4 4 5 6 8 9 12 12 13 13 14 16 19 19 22 25 29 30 32 LCS_GDT Q 58 Q 58 4 6 15 4 4 5 5 6 8 9 12 12 13 13 15 16 19 20 23 25 29 30 34 LCS_GDT Q 59 Q 59 4 6 15 4 4 5 5 6 8 9 12 12 13 13 15 18 19 21 26 28 31 33 36 LCS_GDT Y 60 Y 60 3 5 15 0 3 5 5 5 8 9 12 12 13 15 17 19 21 25 26 28 31 33 36 LCS_GDT H 61 H 61 3 5 15 3 3 4 4 4 6 10 10 11 13 14 16 19 20 22 23 27 30 33 36 LCS_GDT A 62 A 62 3 7 15 3 3 4 6 7 8 11 13 14 15 16 18 19 20 22 24 25 30 32 36 LCS_GDT L 63 L 63 4 7 15 3 4 6 6 7 8 9 12 14 15 16 18 19 20 22 25 28 30 33 36 LCS_GDT T 64 T 64 5 7 15 5 5 8 10 11 12 12 13 14 15 16 18 19 20 22 24 26 27 30 36 LCS_GDT V 65 V 65 5 7 15 5 5 8 10 11 12 12 13 14 15 16 18 19 20 22 24 26 29 31 33 LCS_GDT G 66 G 66 5 7 14 5 5 8 10 11 12 12 13 14 15 16 18 19 20 22 24 25 26 27 29 LCS_GDT D 67 D 67 5 7 14 5 5 8 10 11 12 12 13 14 15 16 18 19 20 22 24 25 26 27 29 LCS_GDT Q 68 Q 68 5 7 14 5 5 8 10 11 12 12 13 14 15 16 18 19 20 22 24 25 26 27 28 LCS_GDT G 69 G 69 3 3 13 3 3 3 3 6 7 7 8 9 11 14 16 18 21 23 26 28 31 33 36 LCS_GDT T 70 T 70 3 9 13 3 3 4 6 8 9 10 11 11 12 13 13 18 21 25 26 28 31 33 36 LCS_GDT L 71 L 71 3 9 13 3 3 4 6 8 9 10 11 11 13 15 18 19 22 25 26 28 31 33 36 LCS_GDT S 72 S 72 3 9 13 3 3 5 6 8 9 10 11 11 12 16 18 19 22 25 26 28 31 33 36 LCS_GDT Y 73 Y 73 3 9 13 3 3 5 6 8 9 10 11 11 13 15 18 19 22 25 26 28 31 33 36 LCS_GDT K 74 K 74 3 9 13 3 3 5 6 8 9 10 11 11 13 14 17 18 22 25 26 28 31 33 36 LCS_GDT G 75 G 75 4 9 13 3 3 4 6 8 9 10 11 11 12 13 13 16 17 18 23 27 29 32 34 LCS_GDT T 76 T 76 4 9 13 3 3 5 6 8 9 10 11 11 12 13 13 14 15 17 18 18 20 29 32 LCS_GDT R 77 R 77 4 9 13 3 3 5 6 8 9 10 11 11 12 13 13 14 17 21 25 28 30 33 36 LCS_GDT F 78 F 78 4 9 13 3 3 4 6 7 9 10 11 11 12 13 13 16 20 25 26 28 31 33 36 LCS_GDT V 79 V 79 3 4 13 3 3 4 4 5 5 6 8 11 13 14 17 18 22 25 26 28 31 33 36 LCS_GDT G 80 G 80 3 4 13 3 3 3 4 5 5 5 6 8 11 12 15 17 22 25 26 28 31 33 36 LCS_GDT F 81 F 81 3 4 13 3 3 3 4 5 5 5 6 8 9 10 11 15 16 18 22 28 31 33 36 LCS_GDT V 82 V 82 3 3 12 3 3 3 4 4 4 6 7 11 13 15 17 19 22 25 26 28 31 33 36 LCS_GDT S 83 S 83 3 3 12 3 3 3 4 4 4 5 5 6 9 10 11 11 11 17 24 28 31 32 35 LCS_AVERAGE LCS_A: 12.12 ( 6.10 9.49 20.77 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 5 8 10 11 12 12 13 14 15 16 18 19 22 25 26 28 31 33 36 GDT PERCENT_AT 8.20 8.20 13.11 16.39 18.03 19.67 19.67 21.31 22.95 24.59 26.23 29.51 31.15 36.07 40.98 42.62 45.90 50.82 54.10 59.02 GDT RMS_LOCAL 0.21 0.21 1.19 1.38 1.56 1.81 1.81 2.13 2.48 2.76 3.01 3.46 3.80 5.18 5.53 5.65 5.89 6.35 6.82 7.33 GDT RMS_ALL_AT 15.19 15.19 14.92 14.86 14.83 14.66 14.66 14.61 14.59 14.45 14.45 14.45 14.35 13.30 13.24 13.18 13.20 13.01 12.90 12.87 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 8 Q 8 24.609 5 0.067 0.067 25.117 0.000 0.000 LGA V 9 V 9 17.958 3 0.070 0.070 20.386 0.000 0.000 LGA V 10 V 10 15.326 3 0.022 0.022 16.037 0.000 0.000 LGA V 11 V 11 10.491 3 0.093 0.093 12.613 0.476 0.272 LGA S 12 S 12 5.823 2 0.548 0.548 6.855 24.524 16.349 LGA N 13 N 13 1.162 4 0.443 0.443 3.658 65.595 32.798 LGA K 14 K 14 1.304 5 0.024 0.024 2.778 73.214 32.540 LGA R 15 R 15 3.263 7 0.149 0.149 3.263 67.262 24.459 LGA E 16 E 16 1.813 5 0.183 0.183 4.137 61.905 27.513 LGA K 17 K 17 2.033 5 0.140 0.140 2.033 82.024 36.455 LGA R 37 R 37 27.644 7 0.261 0.261 29.657 0.000 0.000 LGA Y 38 Y 38 27.852 8 0.094 0.094 27.852 0.000 0.000 LGA E 39 E 39 22.802 5 0.629 0.629 24.965 0.000 0.000 LGA A 40 A 40 23.581 1 0.606 0.606 23.581 0.000 0.000 LGA S 41 S 41 20.971 2 0.607 0.607 22.398 0.000 0.000 LGA F 42 F 42 17.611 7 0.582 0.582 18.542 0.000 0.000 LGA K 43 K 43 19.664 5 0.624 0.624 20.413 0.000 0.000 LGA P 44 P 44 20.128 3 0.616 0.616 20.802 0.000 0.000 LGA L 45 L 45 19.993 4 0.047 0.047 20.648 0.000 0.000 LGA N 46 N 46 20.713 4 0.279 0.279 21.435 0.000 0.000 LGA G 47 G 47 22.525 0 0.593 0.593 22.525 0.000 0.000 LGA G 48 G 48 18.093 0 0.540 0.540 19.623 0.000 0.000 LGA L 49 L 49 12.390 4 0.648 0.648 14.219 0.000 0.000 LGA E 50 E 50 12.292 5 0.616 0.616 12.479 0.000 0.000 LGA K 51 K 51 10.857 5 0.593 0.593 11.509 1.071 0.476 LGA T 52 T 52 7.222 3 0.587 0.587 7.961 15.119 8.639 LGA F 53 F 53 1.298 7 0.674 0.674 2.731 73.214 26.623 LGA R 54 R 54 2.758 7 0.443 0.443 7.478 42.500 15.455 LGA L 55 L 55 9.710 4 0.513 0.513 12.083 3.452 1.726 LGA Q 56 Q 56 13.736 5 0.254 0.254 14.593 0.000 0.000 LGA A 57 A 57 18.116 1 0.167 0.167 18.257 0.000 0.000 LGA Q 58 Q 58 18.774 5 0.209 0.209 18.774 0.000 0.000 LGA Q 59 Q 59 12.201 5 0.591 0.591 14.520 0.000 0.000 LGA Y 60 Y 60 8.318 8 0.649 0.649 9.618 9.167 3.056 LGA H 61 H 61 7.982 6 0.660 0.660 8.367 10.595 4.238 LGA A 62 A 62 4.270 1 0.178 0.178 5.888 30.357 24.286 LGA L 63 L 63 5.456 4 0.667 0.667 5.456 34.524 17.262 LGA T 64 T 64 1.028 3 0.310 0.310 2.530 79.881 45.646 LGA V 65 V 65 1.485 3 0.033 0.033 1.489 81.429 46.531 LGA G 66 G 66 1.638 0 0.078 0.078 1.844 75.000 75.000 LGA D 67 D 67 1.166 4 0.016 0.016 1.410 81.429 40.714 LGA Q 68 Q 68 1.802 5 0.592 0.592 2.011 70.833 31.481 LGA G 69 G 69 10.361 0 0.054 0.054 10.475 0.833 0.833 LGA T 70 T 70 12.459 3 0.626 0.626 12.459 0.000 0.000 LGA L 71 L 71 6.886 4 0.574 0.574 8.650 14.762 7.381 LGA S 72 S 72 6.302 2 0.225 0.225 6.302 26.786 17.857 LGA Y 73 Y 73 6.205 8 0.154 0.154 9.471 11.190 3.730 LGA K 74 K 74 14.060 5 0.247 0.247 15.031 0.000 0.000 LGA G 75 G 75 15.426 0 0.415 0.415 15.426 0.000 0.000 LGA T 76 T 76 18.095 3 0.116 0.116 18.624 0.000 0.000 LGA R 77 R 77 16.968 7 0.590 0.590 16.968 0.000 0.000 LGA F 78 F 78 13.928 7 0.586 0.586 18.061 0.000 0.000 LGA V 79 V 79 17.708 3 0.093 0.093 20.727 0.000 0.000 LGA G 80 G 80 18.357 0 0.601 0.601 18.357 0.000 0.000 LGA F 81 F 81 16.581 7 0.599 0.599 20.108 0.000 0.000 LGA V 82 V 82 17.621 3 0.571 0.571 18.131 0.000 0.000 LGA S 83 S 83 18.848 2 0.603 0.603 21.817 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 57 228 228 100.00 455 228 50.11 61 SUMMARY(RMSD_GDC): 12.093 11.960 11.960 17.002 8.874 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 76 61 4.0 13 2.13 22.131 18.881 0.582 LGA_LOCAL RMSD: 2.134 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.607 Number of assigned atoms: 57 Std_ASGN_ATOMS RMSD: 12.093 Standard rmsd on all 57 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.449241 * X + 0.321206 * Y + -0.833672 * Z + 16.776293 Y_new = 0.768664 * X + -0.336628 * Y + -0.543909 * Z + -1.720853 Z_new = -0.455344 * X + -0.885160 * Y + -0.095673 * Z + 8.364915 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.099698 0.472759 -1.678463 [DEG: 120.3039 27.0871 -96.1689 ] ZXZ: -0.992718 1.666616 -2.666476 [DEG: -56.8786 95.4900 -152.7778 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0564AL285_1-D1 REMARK 2: T0564-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0564AL285_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 76 61 4.0 13 2.13 18.881 12.09 REMARK ---------------------------------------------------------- MOLECULE T0564AL285_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 3csqA ATOM 1 N GLN 8 1.967 12.490 -16.640 1.00 0.00 N ATOM 2 CA GLN 8 1.183 12.812 -15.417 1.00 0.00 C ATOM 3 C GLN 8 0.785 11.555 -14.673 1.00 0.00 C ATOM 4 O GLN 8 0.044 10.722 -15.195 1.00 0.00 O ATOM 5 N VAL 9 1.233 11.457 -13.422 1.00 0.00 N ATOM 6 CA VAL 9 0.696 10.452 -12.511 1.00 0.00 C ATOM 7 C VAL 9 0.446 11.110 -11.140 1.00 0.00 C ATOM 8 O VAL 9 1.115 12.086 -10.788 1.00 0.00 O ATOM 9 N VAL 10 -0.525 10.584 -10.395 1.00 0.00 N ATOM 10 CA VAL 10 -0.790 10.989 -9.012 1.00 0.00 C ATOM 11 C VAL 10 0.008 10.056 -8.098 1.00 0.00 C ATOM 12 O VAL 10 -0.169 8.818 -8.131 1.00 0.00 O ATOM 13 N VAL 11 0.922 10.634 -7.320 1.00 0.00 N ATOM 14 CA VAL 11 1.769 9.883 -6.377 1.00 0.00 C ATOM 15 C VAL 11 1.809 10.603 -5.038 1.00 0.00 C ATOM 16 O VAL 11 2.309 11.719 -4.940 1.00 0.00 O ATOM 17 N SER 12 1.295 9.938 -4.002 1.00 0.00 N ATOM 18 CA SER 12 1.132 10.575 -2.694 1.00 0.00 C ATOM 19 C SER 12 0.787 9.538 -1.639 1.00 0.00 C ATOM 20 O SER 12 0.383 8.421 -1.983 1.00 0.00 O ATOM 21 N ASN 13 0.957 9.914 -0.365 1.00 0.00 N ATOM 22 CA ASN 13 0.521 9.091 0.755 1.00 0.00 C ATOM 23 C ASN 13 -0.914 9.449 1.159 1.00 0.00 C ATOM 24 O ASN 13 -1.182 9.759 2.307 1.00 0.00 O ATOM 25 N LYS 14 -1.833 9.401 0.206 1.00 0.00 N ATOM 26 CA LYS 14 -3.224 9.769 0.466 1.00 0.00 C ATOM 27 CA LYS 14 -3.224 9.784 0.449 1.00 0.00 C ATOM 28 C LYS 14 -4.121 8.983 -0.491 1.00 0.00 C ATOM 29 O LYS 14 -3.697 8.654 -1.588 1.00 0.00 O ATOM 30 N ARG 15 -5.352 8.657 -0.055 1.00 0.00 N ATOM 31 CA ARG 15 -6.314 7.903 -0.932 1.00 0.00 C ATOM 32 C ARG 15 -6.797 8.735 -2.107 1.00 0.00 C ATOM 33 O ARG 15 -7.240 9.853 -1.949 1.00 0.00 O ATOM 34 N GLU 16 -6.674 8.185 -3.305 1.00 0.00 N ATOM 35 CA GLU 16 -7.037 8.891 -4.497 1.00 0.00 C ATOM 36 C GLU 16 -8.526 8.840 -4.746 1.00 0.00 C ATOM 37 O GLU 16 -9.178 7.836 -4.437 1.00 0.00 O ATOM 38 N LYS 17 -9.067 9.913 -5.346 1.00 0.00 N ATOM 39 CA LYS 17 -10.452 9.928 -5.820 1.00 0.00 C ATOM 40 C LYS 17 -10.521 9.105 -7.117 1.00 0.00 C ATOM 41 O LYS 17 -9.480 8.812 -7.700 1.00 0.00 O ATOM 42 N PRO 18 -11.725 8.802 -7.603 1.00 0.00 N ATOM 43 CA PRO 18 -11.873 8.096 -8.876 1.00 0.00 C ATOM 44 C PRO 18 -11.255 8.843 -10.034 1.00 0.00 C ATOM 45 O PRO 18 -10.731 8.211 -10.953 1.00 0.00 O ATOM 46 N VAL 19 -11.359 10.183 -10.019 1.00 0.00 N ATOM 47 CA VAL 19 -10.723 11.003 -11.069 1.00 0.00 C ATOM 48 C VAL 19 -9.210 10.798 -11.105 1.00 0.00 C ATOM 49 O VAL 19 -8.632 10.593 -12.179 1.00 0.00 O ATOM 50 N ASN 20 -8.566 10.900 -9.951 1.00 0.00 N ATOM 51 CA ASN 20 -7.105 10.671 -9.858 1.00 0.00 C ATOM 52 C ASN 20 -6.702 9.214 -10.223 1.00 0.00 C ATOM 53 O ASN 20 -5.771 9.004 -11.024 1.00 0.00 O ATOM 54 N ASP 21 -7.439 8.229 -9.701 1.00 0.00 N ATOM 55 CA ASP 21 -7.198 6.810 -10.050 1.00 0.00 C ATOM 56 C ASP 21 -7.321 6.561 -11.539 1.00 0.00 C ATOM 57 O ASP 21 -6.568 5.747 -12.094 1.00 0.00 O ATOM 58 N ARG 22 -8.314 7.182 -12.174 1.00 0.00 N ATOM 59 CA ARG 22 -8.526 7.018 -13.639 1.00 0.00 C ATOM 60 C ARG 22 -7.292 7.438 -14.457 1.00 0.00 C ATOM 61 O ARG 22 -6.924 6.795 -15.468 1.00 0.00 O ATOM 62 N ARG 23 -6.658 8.526 -14.026 1.00 0.00 N ATOM 63 CA ARG 23 -5.422 8.987 -14.641 1.00 0.00 C ATOM 64 C ARG 23 -4.326 7.931 -14.462 1.00 0.00 C ATOM 65 O ARG 23 -3.648 7.523 -15.444 1.00 0.00 O ATOM 66 N SER 24 -4.166 7.440 -13.231 1.00 0.00 N ATOM 67 CA SER 24 -3.174 6.383 -12.967 1.00 0.00 C ATOM 68 C SER 24 -3.445 5.106 -13.717 1.00 0.00 C ATOM 69 O SER 24 -2.511 4.466 -14.247 1.00 0.00 O ATOM 70 N ARG 25 -4.718 4.722 -13.740 1.00 0.00 N ATOM 71 CA ARG 25 -5.171 3.465 -14.396 1.00 0.00 C ATOM 72 C ARG 25 -4.928 3.477 -15.896 1.00 0.00 C ATOM 73 O ARG 25 -4.486 2.480 -16.489 1.00 0.00 O ATOM 74 N GLN 26 -5.223 4.624 -16.521 1.00 0.00 N ATOM 75 CA GLN 26 -4.890 4.845 -17.940 1.00 0.00 C ATOM 76 C GLN 26 -3.371 4.718 -18.197 1.00 0.00 C ATOM 77 O GLN 26 -2.949 4.039 -19.138 1.00 0.00 O ATOM 78 N GLN 27 -2.563 5.377 -17.372 1.00 0.00 N ATOM 79 CA GLN 27 -1.095 5.349 -17.501 1.00 0.00 C ATOM 80 C GLN 27 -0.554 3.917 -17.458 1.00 0.00 C ATOM 81 O GLN 27 0.182 3.474 -18.360 1.00 0.00 O ATOM 82 N GLU 28 -0.942 3.172 -16.426 1.00 0.00 N ATOM 83 CA GLU 28 -0.610 1.749 -16.282 1.00 0.00 C ATOM 84 C GLU 28 -1.056 0.911 -17.469 1.00 0.00 C ATOM 85 O GLU 28 -0.288 0.064 -17.954 1.00 0.00 O ATOM 86 N VAL 29 -2.280 1.133 -17.954 1.00 0.00 N ATOM 87 CA VAL 29 -2.713 0.448 -19.172 1.00 0.00 C ATOM 88 C VAL 29 -1.757 0.705 -20.339 1.00 0.00 C ATOM 89 O VAL 29 -1.231 -0.223 -20.923 1.00 0.00 O ATOM 90 N SER 30 -1.513 1.971 -20.636 1.00 0.00 N ATOM 91 CA SER 30 -0.587 2.353 -21.718 1.00 0.00 C ATOM 92 C SER 30 0.800 1.707 -21.592 1.00 0.00 C ATOM 93 O SER 30 1.314 1.100 -22.529 1.00 0.00 O ATOM 94 N PRO 31 1.388 1.817 -20.404 1.00 0.00 N ATOM 95 CA PRO 31 2.693 1.235 -20.119 1.00 0.00 C ATOM 96 C PRO 31 2.768 -0.285 -20.286 1.00 0.00 C ATOM 97 O PRO 31 3.675 -0.803 -20.918 1.00 0.00 O ATOM 98 N ALA 32 1.838 -1.016 -19.679 1.00 0.00 N ATOM 99 CA ALA 32 1.938 -2.472 -19.709 1.00 0.00 C ATOM 100 C ALA 32 1.456 -3.022 -21.041 1.00 0.00 C ATOM 101 O ALA 32 1.916 -4.071 -21.451 1.00 0.00 O ATOM 102 N GLY 33 0.561 -2.296 -21.715 1.00 0.00 N ATOM 103 CA GLY 33 0.169 -2.631 -23.112 1.00 0.00 C ATOM 104 C GLY 33 1.358 -2.713 -24.073 1.00 0.00 C ATOM 105 O GLY 33 1.438 -3.626 -24.893 1.00 0.00 O ATOM 106 N THR 34 2.264 -1.744 -23.959 1.00 0.00 N ATOM 107 CA THR 34 3.523 -1.691 -24.711 1.00 0.00 C ATOM 108 C THR 34 4.483 -2.779 -24.268 1.00 0.00 C ATOM 109 O THR 34 5.456 -3.085 -24.952 1.00 0.00 O ATOM 110 N SER 35 4.238 -3.336 -23.094 1.00 0.00 N ATOM 111 CA SER 35 5.055 -4.400 -22.598 1.00 0.00 C ATOM 112 C SER 35 4.447 -5.772 -22.915 1.00 0.00 C ATOM 113 O SER 35 4.973 -6.798 -22.487 1.00 0.00 O ATOM 114 N MET 36 3.326 -5.783 -23.630 1.00 0.00 N ATOM 115 CA MET 36 2.738 -7.045 -24.101 1.00 0.00 C ATOM 116 C MET 36 1.699 -7.696 -23.194 1.00 0.00 C ATOM 117 O MET 36 1.269 -8.819 -23.469 1.00 0.00 O ATOM 118 N ARG 37 1.272 -7.013 -22.126 1.00 0.00 N ATOM 119 CA ARG 37 0.148 -7.522 -21.318 1.00 0.00 C ATOM 120 C ARG 37 -1.174 -7.286 -22.045 1.00 0.00 C ATOM 121 O ARG 37 -1.287 -6.298 -22.767 1.00 0.00 O ATOM 122 N TYR 38 -2.195 -8.129 -21.794 1.00 0.00 N ATOM 123 CA TYR 38 -3.510 -7.958 -22.420 1.00 0.00 C ATOM 124 C TYR 38 -4.305 -6.922 -21.647 1.00 0.00 C ATOM 125 O TYR 38 -3.975 -6.630 -20.504 1.00 0.00 O ATOM 126 N GLU 39 -5.330 -6.335 -22.260 1.00 0.00 N ATOM 127 CA GLU 39 -6.123 -5.311 -21.557 1.00 0.00 C ATOM 128 C GLU 39 -6.867 -5.956 -20.393 1.00 0.00 C ATOM 129 O GLU 39 -7.040 -5.329 -19.320 1.00 0.00 O ATOM 130 N ALA 40 -7.263 -7.221 -20.593 1.00 0.00 N ATOM 131 CA ALA 40 -7.962 -7.967 -19.548 1.00 0.00 C ATOM 132 C ALA 40 -7.123 -8.174 -18.287 1.00 0.00 C ATOM 133 O ALA 40 -7.592 -7.957 -17.155 1.00 0.00 O ATOM 134 N SER 41 -5.875 -8.567 -18.472 1.00 0.00 N ATOM 135 CA SER 41 -5.032 -8.929 -17.331 1.00 0.00 C ATOM 136 C SER 41 -4.623 -7.649 -16.582 1.00 0.00 C ATOM 137 O SER 41 -4.554 -7.631 -15.344 1.00 0.00 O ATOM 138 N PHE 42 -4.393 -6.573 -17.331 1.00 0.00 N ATOM 139 CA PHE 42 -4.021 -5.282 -16.740 1.00 0.00 C ATOM 140 C PHE 42 -5.166 -4.803 -15.882 1.00 0.00 C ATOM 141 O PHE 42 -4.965 -4.394 -14.729 1.00 0.00 O ATOM 142 N LYS 43 -6.375 -4.837 -16.449 1.00 0.00 N ATOM 143 CA LYS 43 -7.600 -4.473 -15.697 1.00 0.00 C ATOM 144 C LYS 43 -7.868 -5.384 -14.511 1.00 0.00 C ATOM 145 O LYS 43 -8.300 -4.920 -13.460 1.00 0.00 O ATOM 146 N PRO 44 -7.591 -6.682 -14.656 1.00 0.00 N ATOM 147 CA PRO 44 -7.726 -7.570 -13.519 1.00 0.00 C ATOM 148 C PRO 44 -6.803 -7.175 -12.385 1.00 0.00 C ATOM 149 O PRO 44 -7.187 -7.251 -11.200 1.00 0.00 O ATOM 150 N LEU 45 -5.584 -6.734 -12.737 1.00 0.00 N ATOM 151 CA LEU 45 -4.633 -6.190 -11.745 1.00 0.00 C ATOM 152 C LEU 45 -5.019 -4.863 -11.170 1.00 0.00 C ATOM 153 O LEU 45 -4.856 -4.616 -9.954 1.00 0.00 O ATOM 154 N ASN 46 -5.526 -3.998 -12.024 1.00 0.00 N ATOM 155 CA ASN 46 -6.069 -2.710 -11.599 1.00 0.00 C ATOM 156 C ASN 46 -7.188 -2.818 -10.558 1.00 0.00 C ATOM 157 O ASN 46 -7.238 -2.022 -9.620 1.00 0.00 O ATOM 158 N GLY 47 -8.081 -3.785 -10.748 1.00 0.00 N ATOM 159 CA GLY 47 -9.167 -4.047 -9.791 1.00 0.00 C ATOM 160 C GLY 47 -8.613 -4.323 -8.410 1.00 0.00 C ATOM 161 O GLY 47 -9.117 -3.794 -7.387 1.00 0.00 O ATOM 162 N GLY 48 -7.569 -5.137 -8.405 1.00 0.00 N ATOM 163 CA GLY 48 -6.764 -5.405 -7.222 1.00 0.00 C ATOM 164 C GLY 48 -6.048 -4.171 -6.681 1.00 0.00 C ATOM 165 O GLY 48 -6.131 -3.869 -5.476 1.00 0.00 O ATOM 166 N LEU 49 -5.376 -3.410 -7.545 1.00 0.00 N ATOM 167 CA LEU 49 -4.613 -2.259 -7.027 1.00 0.00 C ATOM 168 C LEU 49 -5.578 -1.170 -6.517 1.00 0.00 C ATOM 169 O LEU 49 -5.227 -0.399 -5.615 1.00 0.00 O ATOM 170 N GLU 50 -6.785 -1.103 -7.086 1.00 0.00 N ATOM 171 CA GLU 50 -7.789 -0.176 -6.564 1.00 0.00 C ATOM 172 C GLU 50 -8.118 -0.493 -5.115 1.00 0.00 C ATOM 173 O GLU 50 -8.291 0.423 -4.319 1.00 0.00 O ATOM 174 N LYS 51 -8.284 -1.779 -4.801 1.00 0.00 N ATOM 175 CA LYS 51 -8.560 -2.181 -3.419 1.00 0.00 C ATOM 176 C LYS 51 -7.307 -2.039 -2.521 1.00 0.00 C ATOM 177 O LYS 51 -7.424 -1.677 -1.372 1.00 0.00 O ATOM 178 N THR 52 -6.108 -2.294 -3.046 1.00 0.00 N ATOM 179 CA THR 52 -4.914 -2.283 -2.189 1.00 0.00 C ATOM 180 C THR 52 -4.529 -0.851 -1.826 1.00 0.00 C ATOM 181 O THR 52 -4.072 -0.585 -0.716 1.00 0.00 O ATOM 182 N PHE 53 -4.695 0.044 -2.786 1.00 0.00 N ATOM 183 CA PHE 53 -3.962 1.308 -2.760 1.00 0.00 C ATOM 184 C PHE 53 -4.661 2.519 -3.355 1.00 0.00 C ATOM 185 O PHE 53 -4.089 3.629 -3.314 1.00 0.00 O ATOM 186 N ARG 54 -5.900 2.342 -3.828 1.00 0.00 N ATOM 187 CA ARG 54 -6.552 3.303 -4.740 1.00 0.00 C ATOM 188 C ARG 54 -5.606 3.651 -5.922 1.00 0.00 C ATOM 189 O ARG 54 -5.506 4.807 -6.394 1.00 0.00 O ATOM 190 N LEU 55 -4.943 2.613 -6.421 1.00 0.00 N ATOM 191 CA LEU 55 -3.950 2.773 -7.528 1.00 0.00 C ATOM 192 C LEU 55 -2.981 3.948 -7.288 1.00 0.00 C ATOM 193 O LEU 55 -2.755 4.819 -8.165 1.00 0.00 O ATOM 194 N GLN 56 -2.414 3.982 -6.089 1.00 0.00 N ATOM 195 CA GLN 56 -1.492 5.023 -5.730 1.00 0.00 C ATOM 196 C GLN 56 -0.090 4.476 -5.442 1.00 0.00 C ATOM 197 O GLN 56 0.147 3.852 -4.426 1.00 0.00 O ATOM 198 N ALA 57 0.862 4.730 -6.349 1.00 0.00 N ATOM 199 CA ALA 57 2.269 4.321 -6.122 1.00 0.00 C ATOM 200 C ALA 57 2.973 4.983 -4.920 1.00 0.00 C ATOM 201 O ALA 57 4.041 4.549 -4.535 1.00 0.00 O ATOM 202 N GLN 58 2.402 6.008 -4.306 1.00 0.00 N ATOM 203 CA GLN 58 3.105 6.582 -3.169 1.00 0.00 C ATOM 204 C GLN 58 2.481 6.209 -1.835 1.00 0.00 C ATOM 205 O GLN 58 2.833 6.774 -0.809 1.00 0.00 O ATOM 206 N GLN 59 1.536 5.275 -1.845 1.00 0.00 N ATOM 207 CA GLN 59 0.713 5.026 -0.642 1.00 0.00 C ATOM 208 C GLN 59 1.323 4.008 0.285 1.00 0.00 C ATOM 209 O GLN 59 1.665 2.903 -0.122 1.00 0.00 O ATOM 210 N TYR 60 1.439 4.401 1.556 1.00 0.00 N ATOM 211 CA TYR 60 1.897 3.536 2.636 1.00 0.00 C ATOM 212 C TYR 60 0.656 2.952 3.321 1.00 0.00 C ATOM 213 O TYR 60 -0.328 3.634 3.462 1.00 0.00 O ATOM 214 N HIS 61 0.724 1.690 3.738 1.00 0.00 N ATOM 215 CA HIS 61 -0.417 1.023 4.348 1.00 0.00 C ATOM 216 C HIS 61 -0.849 1.835 5.564 1.00 0.00 C ATOM 217 O HIS 61 0.016 2.265 6.356 1.00 0.00 O ATOM 218 N ALA 62 -2.173 2.075 5.670 1.00 0.00 N ATOM 219 CA ALA 62 -2.789 2.810 6.795 1.00 0.00 C ATOM 220 C ALA 62 -2.274 4.242 6.853 1.00 0.00 C ATOM 221 O ALA 62 -2.369 4.904 7.886 1.00 0.00 O ATOM 222 N LEU 63 -1.718 4.715 5.719 1.00 0.00 N ATOM 223 CA LEU 63 -1.066 6.031 5.627 1.00 0.00 C ATOM 224 C LEU 63 0.171 6.155 6.539 1.00 0.00 C ATOM 225 O LEU 63 0.688 7.248 6.752 1.00 0.00 O ATOM 226 N THR 64 0.668 5.017 7.029 1.00 0.00 N ATOM 227 CA THR 64 1.855 4.988 7.909 1.00 0.00 C ATOM 228 C THR 64 3.169 5.243 7.172 1.00 0.00 C ATOM 229 O THR 64 3.953 4.314 6.995 1.00 0.00 O ATOM 230 N VAL 65 3.410 6.491 6.766 1.00 0.00 N ATOM 231 CA VAL 65 4.637 6.848 6.055 1.00 0.00 C ATOM 232 C VAL 65 5.920 6.334 6.710 1.00 0.00 C ATOM 233 O VAL 65 6.098 6.444 7.927 1.00 0.00 O ATOM 234 N GLY 66 6.804 5.773 5.894 1.00 0.00 N ATOM 235 CA GLY 66 8.122 5.338 6.346 1.00 0.00 C ATOM 236 C GLY 66 8.182 3.993 7.071 1.00 0.00 C ATOM 237 O GLY 66 9.272 3.478 7.343 1.00 0.00 O ATOM 238 N ASP 67 7.031 3.408 7.384 1.00 0.00 N ATOM 239 CA ASP 67 7.033 2.092 8.009 1.00 0.00 C ATOM 240 C ASP 67 7.271 0.991 6.979 1.00 0.00 C ATOM 241 O ASP 67 6.361 0.555 6.288 1.00 0.00 O ATOM 242 N GLN 68 8.507 0.527 6.905 1.00 0.00 N ATOM 243 CA GLN 68 8.903 -0.414 5.860 1.00 0.00 C ATOM 244 C GLN 68 8.553 -1.876 6.168 1.00 0.00 C ATOM 245 O GLN 68 8.886 -2.766 5.387 1.00 0.00 O ATOM 246 N GLY 69 2.855 1.155 -1.890 1.00 0.00 N ATOM 247 CA GLY 69 2.730 1.320 -3.345 1.00 0.00 C ATOM 248 C GLY 69 1.551 0.613 -3.951 1.00 0.00 C ATOM 249 O GLY 69 0.642 0.199 -3.235 1.00 0.00 O ATOM 250 N THR 70 1.573 0.461 -5.274 1.00 0.00 N ATOM 251 CA THR 70 0.390 0.008 -6.017 1.00 0.00 C ATOM 252 C THR 70 -0.246 -1.303 -5.557 1.00 0.00 C ATOM 253 O THR 70 -1.494 -1.372 -5.471 1.00 0.00 O ATOM 254 N LEU 71 0.577 -2.327 -5.289 1.00 0.00 N ATOM 255 CA LEU 71 0.087 -3.624 -4.833 1.00 0.00 C ATOM 256 C LEU 71 0.375 -3.843 -3.349 1.00 0.00 C ATOM 257 O LEU 71 0.134 -4.920 -2.834 1.00 0.00 O ATOM 258 N SER 72 0.821 -2.790 -2.671 1.00 0.00 N ATOM 259 CA SER 72 1.139 -2.855 -1.252 1.00 0.00 C ATOM 260 C SER 72 2.141 -3.983 -0.966 1.00 0.00 C ATOM 261 O SER 72 1.845 -4.964 -0.272 1.00 0.00 O ATOM 262 N TYR 73 3.330 -3.830 -1.544 1.00 0.00 N ATOM 263 CA TYR 73 4.474 -4.710 -1.282 1.00 0.00 C ATOM 264 C TYR 73 4.678 -4.781 0.230 1.00 0.00 C ATOM 265 O TYR 73 4.870 -3.766 0.849 1.00 0.00 O ATOM 266 N LYS 74 6.821 -6.988 3.283 1.00 0.00 N ATOM 267 CA LYS 74 7.214 -5.695 3.793 1.00 0.00 C ATOM 268 C LYS 74 7.673 -4.814 2.652 1.00 0.00 C ATOM 269 O LYS 74 8.214 -5.310 1.642 1.00 0.00 O ATOM 270 N GLY 75 7.475 -3.517 2.820 1.00 0.00 N ATOM 271 CA GLY 75 7.779 -2.546 1.766 1.00 0.00 C ATOM 272 C GLY 75 9.249 -2.619 1.364 1.00 0.00 C ATOM 273 O GLY 75 9.613 -2.340 0.227 1.00 0.00 O ATOM 274 N THR 76 10.086 -3.034 2.312 1.00 0.00 N ATOM 275 CA THR 76 11.509 -3.008 2.101 1.00 0.00 C ATOM 276 C THR 76 11.946 -3.966 1.011 1.00 0.00 C ATOM 277 O THR 76 13.016 -3.787 0.455 1.00 0.00 O ATOM 278 N ARG 77 11.166 -5.005 0.726 1.00 0.00 N ATOM 279 CA ARG 77 11.523 -5.929 -0.348 1.00 0.00 C ATOM 280 C ARG 77 11.521 -5.216 -1.686 1.00 0.00 C ATOM 281 O ARG 77 12.459 -5.368 -2.497 1.00 0.00 O ATOM 282 N PHE 78 10.482 -4.413 -1.913 1.00 0.00 N ATOM 283 CA PHE 78 10.428 -3.581 -3.114 1.00 0.00 C ATOM 284 C PHE 78 11.452 -2.440 -3.046 1.00 0.00 C ATOM 285 O PHE 78 12.226 -2.220 -3.980 1.00 0.00 O ATOM 286 N VAL 79 11.451 -1.719 -1.933 1.00 0.00 N ATOM 287 CA VAL 79 12.245 -0.510 -1.840 1.00 0.00 C ATOM 288 C VAL 79 13.711 -0.866 -2.025 1.00 0.00 C ATOM 289 O VAL 79 14.450 -0.139 -2.705 1.00 0.00 O ATOM 290 N GLY 80 14.117 -1.998 -1.459 1.00 0.00 N ATOM 291 CA GLY 80 15.485 -2.503 -1.619 1.00 0.00 C ATOM 292 C GLY 80 15.790 -2.938 -3.041 1.00 0.00 C ATOM 293 O GLY 80 16.897 -2.679 -3.547 1.00 0.00 O ATOM 294 N PHE 81 14.823 -3.580 -3.698 1.00 0.00 N ATOM 295 CA PHE 81 14.974 -3.934 -5.107 1.00 0.00 C ATOM 296 C PHE 81 15.184 -2.652 -5.944 1.00 0.00 C ATOM 297 O PHE 81 16.075 -2.569 -6.810 1.00 0.00 O ATOM 298 N VAL 82 14.381 -1.639 -5.660 1.00 0.00 N ATOM 299 CA VAL 82 14.490 -0.381 -6.358 1.00 0.00 C ATOM 300 C VAL 82 15.902 0.180 -6.195 1.00 0.00 C ATOM 301 O VAL 82 16.542 0.514 -7.184 1.00 0.00 O ATOM 302 N SER 83 16.423 0.203 -4.960 1.00 0.00 N ATOM 303 CA SER 83 17.759 0.777 -4.732 1.00 0.00 C ATOM 304 C SER 83 18.820 0.019 -5.506 1.00 0.00 C ATOM 305 O SER 83 19.684 0.625 -6.143 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 229 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 83.44 40.5 74 63.2 117 ARMSMC SECONDARY STRUCTURE . . 92.19 34.3 35 53.0 66 ARMSMC SURFACE . . . . . . . . 77.60 44.2 52 61.2 85 ARMSMC BURIED . . . . . . . . 95.82 31.8 22 68.8 32 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 41 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 29 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 22 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 17 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 12 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 12 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 6 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 5 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.02 (Number of atoms: 58) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.02 58 95.1 61 CRMSCA CRN = ALL/NP . . . . . 0.2072 CRMSCA SECONDARY STRUCTURE . . 10.20 31 93.9 33 CRMSCA SURFACE . . . . . . . . 12.26 42 93.3 45 CRMSCA BURIED . . . . . . . . 11.36 16 100.0 16 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 11.94 229 76.6 299 CRMSMC SECONDARY STRUCTURE . . 10.21 121 74.2 163 CRMSMC SURFACE . . . . . . . . 12.22 165 75.0 220 CRMSMC BURIED . . . . . . . . 11.20 64 81.0 79 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 745 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 699 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 429 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 555 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 190 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.94 229 23.2 989 CRMSALL SECONDARY STRUCTURE . . 10.21 121 21.6 561 CRMSALL SURFACE . . . . . . . . 12.22 165 22.4 735 CRMSALL BURIED . . . . . . . . 11.20 64 25.2 254 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.872 1.000 0.500 58 95.1 61 ERRCA SECONDARY STRUCTURE . . 9.358 1.000 0.500 31 93.9 33 ERRCA SURFACE . . . . . . . . 11.104 1.000 0.500 42 93.3 45 ERRCA BURIED . . . . . . . . 10.262 1.000 0.500 16 100.0 16 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.846 1.000 0.500 229 76.6 299 ERRMC SECONDARY STRUCTURE . . 9.442 1.000 0.500 121 74.2 163 ERRMC SURFACE . . . . . . . . 11.104 1.000 0.500 165 75.0 220 ERRMC BURIED . . . . . . . . 10.179 1.000 0.500 64 81.0 79 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 745 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 699 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 429 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 555 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 190 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.846 1.000 0.500 229 23.2 989 ERRALL SECONDARY STRUCTURE . . 9.442 1.000 0.500 121 21.6 561 ERRALL SURFACE . . . . . . . . 11.104 1.000 0.500 165 22.4 735 ERRALL BURIED . . . . . . . . 10.179 1.000 0.500 64 25.2 254 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 5 30 57 61 DISTCA CA (P) 0.00 0.00 0.00 8.20 49.18 61 DISTCA CA (RMS) 0.00 0.00 0.00 4.23 7.61 DISTCA ALL (N) 0 0 1 14 120 228 989 DISTALL ALL (P) 0.00 0.00 0.10 1.42 12.13 989 DISTALL ALL (RMS) 0.00 0.00 2.75 4.01 7.59 DISTALL END of the results output