####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 118 ( 472), selected 118 , name T0562TS328_1-D1 # Molecule2: number of CA atoms 123 ( 1891), selected 118 , name T0562-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0562TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 64 - 92 4.98 20.78 LCS_AVERAGE: 18.49 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 68 - 81 1.88 19.39 LONGEST_CONTINUOUS_SEGMENT: 14 69 - 82 1.93 19.33 LONGEST_CONTINUOUS_SEGMENT: 14 105 - 118 1.74 18.73 LCS_AVERAGE: 7.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 106 - 118 0.94 19.50 LCS_AVERAGE: 5.07 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 118 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 12 19 3 3 7 9 10 14 14 17 22 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT K 2 K 2 3 12 19 3 7 8 9 10 17 20 20 22 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT D 3 D 3 3 12 19 3 4 4 7 11 14 14 17 22 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT G 4 G 4 7 12 19 4 7 8 9 11 17 20 20 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT T 5 T 5 7 12 19 4 7 8 9 11 17 20 20 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT Y 6 Y 6 7 12 19 4 7 8 9 11 17 20 20 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT Y 7 Y 7 7 12 19 4 7 8 9 11 17 20 20 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT A 8 A 8 7 12 19 4 7 8 13 15 17 20 20 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT E 9 E 9 7 12 19 4 7 8 13 15 17 20 20 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT A 10 A 10 7 12 19 4 7 8 9 15 17 20 20 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT D 11 D 11 5 12 19 3 4 7 8 11 14 14 16 21 23 25 30 33 39 41 43 45 47 48 50 LCS_GDT D 12 D 12 5 12 19 3 4 5 8 15 17 20 20 23 28 30 34 35 39 41 43 45 47 50 51 LCS_GDT F 13 F 13 5 12 19 3 4 5 7 9 13 14 18 22 26 27 32 35 39 41 43 45 47 50 52 LCS_GDT D 14 D 14 5 12 19 3 4 6 8 13 17 18 19 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT E 15 E 15 5 12 20 3 4 6 8 10 12 14 16 22 26 27 29 34 37 41 42 45 47 50 52 LCS_GDT S 16 S 16 5 6 21 3 4 5 7 9 13 13 16 17 19 20 22 25 30 35 39 43 47 50 52 LCS_GDT G 17 G 17 4 5 21 3 4 4 4 5 6 9 16 17 20 22 29 30 31 34 37 39 43 48 52 LCS_GDT W 18 W 18 4 5 21 3 4 4 5 5 6 10 16 17 20 22 29 30 31 34 34 39 40 45 50 LCS_GDT K 19 K 19 3 5 21 3 3 4 5 6 6 6 11 17 20 22 29 30 32 37 40 43 47 50 52 LCS_GDT D 20 D 20 3 10 21 3 3 4 5 10 10 10 16 17 20 22 29 30 32 35 40 43 47 50 52 LCS_GDT T 21 T 21 7 10 21 3 4 7 9 10 10 10 13 16 20 23 29 30 31 32 37 39 43 48 52 LCS_GDT V 22 V 22 7 10 21 4 6 7 9 10 11 11 14 16 20 23 25 26 32 37 40 43 47 50 52 LCS_GDT T 23 T 23 7 10 21 4 6 7 9 10 11 11 13 15 17 23 29 30 31 34 37 40 43 48 52 LCS_GDT I 24 I 24 7 10 21 3 6 7 9 10 10 10 11 15 15 18 22 30 32 37 40 43 47 50 52 LCS_GDT E 25 E 25 7 10 21 4 6 7 9 10 13 16 17 19 22 26 28 31 33 34 37 43 46 48 52 LCS_GDT V 26 V 26 7 10 21 4 6 7 9 10 13 16 17 19 22 26 29 31 35 39 40 45 47 50 52 LCS_GDT K 27 K 27 7 10 21 3 6 7 9 10 11 16 17 19 22 26 28 31 33 39 40 44 46 50 52 LCS_GDT N 28 N 28 7 10 21 3 4 7 9 10 10 11 15 18 22 26 28 31 35 39 42 45 47 50 52 LCS_GDT G 29 G 29 3 10 21 3 4 7 9 10 11 14 16 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT K 30 K 30 4 6 21 3 4 4 6 8 12 14 18 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT I 31 I 31 4 9 21 3 4 4 6 8 11 14 16 19 26 30 34 35 39 41 43 45 47 50 52 LCS_GDT V 32 V 32 6 9 21 3 5 6 8 8 11 14 16 19 23 27 29 35 39 41 43 45 47 50 52 LCS_GDT S 33 S 33 6 9 21 3 5 6 8 8 11 13 16 19 23 27 29 34 37 41 43 45 47 50 52 LCS_GDT V 34 V 34 6 9 21 3 5 6 8 8 11 14 16 19 23 29 34 35 39 41 43 45 47 50 52 LCS_GDT D 35 D 35 6 9 21 3 5 6 8 8 9 11 13 16 23 27 31 34 39 41 43 45 47 50 52 LCS_GDT W 36 W 36 6 9 21 3 5 6 8 8 9 11 13 16 25 29 34 35 39 41 43 45 47 50 52 LCS_GDT N 37 N 37 6 9 18 0 5 6 8 8 9 11 12 15 23 29 34 35 39 41 43 45 47 50 52 LCS_GDT A 38 A 38 3 9 18 3 3 4 8 8 9 10 18 23 28 30 34 35 39 41 43 45 47 50 50 LCS_GDT I 39 I 39 4 9 18 3 3 4 8 8 9 18 19 23 26 30 34 35 39 41 43 45 47 50 52 LCS_GDT N 40 N 40 4 5 18 3 3 4 5 5 9 18 19 23 28 30 34 35 39 41 43 45 47 50 52 LCS_GDT K 41 K 41 4 5 18 3 3 4 4 5 10 14 16 16 19 20 20 24 30 34 34 36 43 47 52 LCS_GDT D 42 D 42 4 5 17 3 3 4 4 5 7 14 16 16 19 20 20 21 25 31 34 36 37 39 46 LCS_GDT G 43 G 43 3 5 17 3 3 4 4 5 7 7 8 10 19 20 20 25 30 34 34 36 42 47 52 LCS_GDT G 44 G 44 3 5 17 3 3 4 4 5 7 13 14 16 17 19 21 24 30 34 34 36 38 43 46 LCS_GDT D 45 D 45 4 5 20 3 4 4 5 5 7 7 9 10 17 20 24 26 31 34 37 43 46 48 50 LCS_GDT D 46 D 46 4 5 21 3 4 4 5 6 7 7 13 17 18 23 27 31 31 34 37 43 46 48 50 LCS_GDT K 47 K 47 4 5 21 3 4 5 7 9 13 13 15 17 19 22 25 28 30 34 35 43 46 48 50 LCS_GDT D 48 D 48 4 5 21 3 4 4 7 9 13 13 15 17 20 23 25 27 30 34 34 36 41 48 49 LCS_GDT T 49 T 49 3 3 21 0 3 3 3 6 10 10 14 17 20 23 25 26 28 31 33 35 37 37 40 LCS_GDT L 50 L 50 4 4 21 3 4 4 4 4 7 9 13 16 20 23 25 26 28 31 33 35 37 37 40 LCS_GDT S 51 S 51 4 9 21 3 4 4 4 4 4 6 11 13 18 23 25 26 26 28 33 35 37 37 40 LCS_GDT R 52 R 52 4 9 21 3 5 7 9 9 10 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT N 53 N 53 4 9 21 3 4 4 9 9 11 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT G 54 G 54 6 9 21 3 4 6 7 9 10 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT G 55 G 55 6 9 21 5 5 7 9 9 11 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT Y 56 Y 56 6 9 21 5 5 7 9 9 11 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT K 57 K 57 6 9 21 5 5 7 9 9 11 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT M 58 M 58 6 9 21 5 5 7 9 9 11 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT V 59 V 59 6 9 21 5 5 7 9 9 11 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT E 60 E 60 6 9 21 3 3 7 9 9 11 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT Y 61 Y 61 3 9 21 3 3 4 5 7 10 10 11 12 19 23 25 26 28 31 33 35 37 42 46 LCS_GDT G 62 G 62 3 9 21 0 3 7 9 9 10 12 14 16 20 23 25 26 28 31 33 35 37 38 40 LCS_GDT G 63 G 63 3 5 28 3 3 4 6 8 8 12 14 16 20 23 25 26 28 32 35 41 43 46 50 LCS_GDT A 64 A 64 3 5 29 3 3 3 9 11 14 14 17 20 21 25 28 31 36 38 42 46 47 50 50 LCS_GDT Q 65 Q 65 4 5 29 4 5 7 8 11 13 16 18 20 23 26 28 31 36 41 43 46 47 50 50 LCS_GDT A 66 A 66 4 5 29 4 5 7 8 11 12 16 18 20 23 26 28 31 34 38 42 46 47 50 50 LCS_GDT E 67 E 67 4 7 29 3 4 4 8 11 12 15 18 20 23 26 28 31 34 38 42 46 47 50 50 LCS_GDT W 68 W 68 4 14 29 3 4 7 8 11 12 15 18 20 23 26 28 31 38 41 43 46 47 50 52 LCS_GDT H 69 H 69 6 14 29 4 5 10 12 13 13 14 17 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT E 70 E 70 11 14 29 4 5 11 12 13 17 18 19 23 26 29 34 35 39 41 43 46 47 50 52 LCS_GDT Q 71 Q 71 11 14 29 4 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT A 72 A 72 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT E 73 E 73 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT K 74 K 74 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT V 75 V 75 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT E 76 E 76 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT A 77 A 77 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT Y 78 Y 78 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT L 79 L 79 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT V 80 V 80 11 14 29 5 10 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT E 81 E 81 11 14 29 5 9 11 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 LCS_GDT K 82 K 82 4 14 29 3 3 4 9 10 12 17 19 22 26 27 30 34 39 41 43 46 47 50 50 LCS_GDT Q 83 Q 83 4 6 29 3 3 4 5 6 7 14 17 20 21 23 29 33 36 41 43 46 47 50 50 LCS_GDT D 84 D 84 4 6 29 3 3 4 5 6 9 10 15 19 21 23 26 29 34 38 42 46 47 50 50 LCS_GDT P 85 P 85 3 6 29 3 3 4 5 6 9 10 15 19 21 22 26 29 31 34 40 46 47 50 50 LCS_GDT T 86 T 86 3 6 29 3 3 4 6 9 12 16 17 20 22 26 28 31 33 37 42 46 47 50 50 LCS_GDT D 87 D 87 3 6 29 3 3 5 8 9 13 16 17 20 22 26 28 31 34 38 42 46 47 50 50 LCS_GDT I 88 I 88 3 5 29 3 3 4 5 9 13 16 17 20 22 26 28 31 34 38 42 46 47 50 50 LCS_GDT K 89 K 89 3 5 29 1 3 3 5 9 13 16 17 19 22 26 28 31 34 38 42 46 47 50 50 LCS_GDT Y 90 Y 90 3 4 29 0 3 4 6 7 7 8 10 13 18 22 24 27 34 38 42 46 47 50 50 LCS_GDT K 91 K 91 3 5 29 1 3 4 6 7 7 8 10 13 18 22 24 27 30 37 40 46 47 50 50 LCS_GDT D 92 D 92 4 7 29 4 5 5 6 7 7 8 10 13 18 22 24 27 30 37 40 46 47 50 50 LCS_GDT N 93 N 93 4 7 26 4 5 5 6 6 7 8 9 12 14 16 23 25 28 31 34 36 38 42 48 LCS_GDT D 94 D 94 4 7 20 4 5 5 6 6 8 9 10 12 14 16 20 25 28 29 31 34 35 37 39 LCS_GDT G 95 G 95 4 7 20 4 5 5 6 7 8 9 10 12 14 16 21 25 28 29 33 36 38 43 48 LCS_GDT H 96 H 96 4 7 20 3 3 4 5 7 8 9 10 12 14 19 23 25 28 32 38 43 47 50 50 LCS_GDT T 97 T 97 4 7 22 3 5 5 6 6 8 9 10 12 15 19 24 27 34 38 42 46 47 50 50 LCS_GDT D 98 D 98 5 8 22 4 5 5 6 7 13 16 18 19 23 26 28 31 34 38 42 46 47 50 50 LCS_GDT A 99 A 99 5 8 22 4 5 7 8 11 13 16 18 20 23 26 28 31 33 38 42 46 47 50 50 LCS_GDT I 100 I 100 5 8 22 4 5 6 8 11 12 15 18 20 23 26 28 31 33 38 42 46 47 50 50 LCS_GDT S 101 S 101 5 8 22 4 5 7 8 11 13 16 18 20 23 26 28 31 33 38 42 46 47 50 50 LCS_GDT G 102 G 102 5 8 22 4 5 6 8 11 13 16 18 20 23 26 28 31 33 38 42 46 47 50 50 LCS_GDT A 103 A 103 4 8 22 4 5 6 8 11 13 16 18 20 23 26 28 31 34 38 42 46 47 50 50 LCS_GDT T 104 T 104 4 8 22 4 4 7 8 11 13 16 18 20 23 26 28 31 34 38 42 46 47 50 50 LCS_GDT I 105 I 105 4 14 22 4 5 7 8 11 13 16 18 20 23 26 28 31 34 38 42 46 47 50 50 LCS_GDT K 106 K 106 13 14 22 3 4 10 13 13 13 15 18 20 23 24 28 31 33 34 38 43 47 50 50 LCS_GDT V 107 V 107 13 14 22 8 12 12 13 13 13 14 16 19 22 24 27 27 30 32 36 43 46 48 50 LCS_GDT K 108 K 108 13 14 22 8 12 12 13 13 13 14 16 20 22 24 27 28 30 32 36 41 46 48 50 LCS_GDT K 109 K 109 13 14 22 8 12 12 13 13 13 15 18 20 23 24 27 31 34 38 42 46 47 50 50 LCS_GDT F 110 F 110 13 14 22 8 12 12 13 13 13 14 17 20 23 24 27 28 34 38 42 46 47 50 50 LCS_GDT F 111 F 111 13 14 22 8 12 12 13 13 13 15 17 20 23 24 27 28 31 36 38 40 47 50 50 LCS_GDT D 112 D 112 13 14 22 7 12 12 13 13 13 15 18 20 23 24 27 28 33 38 42 46 47 50 50 LCS_GDT L 113 L 113 13 14 22 4 12 12 13 13 13 14 15 17 22 24 26 31 34 38 42 46 47 50 50 LCS_GDT A 114 A 114 13 14 22 8 12 12 13 13 13 14 16 20 23 24 27 31 34 38 42 46 47 50 50 LCS_GDT Q 115 Q 115 13 14 22 8 12 12 13 13 13 15 17 20 23 24 27 31 34 38 42 46 47 50 50 LCS_GDT K 116 K 116 13 14 22 8 12 12 13 13 13 14 14 16 19 22 25 28 33 38 42 46 47 50 50 LCS_GDT A 117 A 117 13 14 22 7 12 12 13 13 13 14 15 17 19 22 26 29 31 38 42 46 47 50 50 LCS_GDT L 118 L 118 13 14 22 3 12 12 13 13 13 14 16 17 21 24 27 29 34 38 42 46 47 50 50 LCS_AVERAGE LCS_A: 10.45 ( 5.07 7.77 18.49 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 12 12 13 15 17 20 20 23 28 30 34 35 39 41 43 46 47 50 52 GDT PERCENT_AT 6.50 9.76 9.76 10.57 12.20 13.82 16.26 16.26 18.70 22.76 24.39 27.64 28.46 31.71 33.33 34.96 37.40 38.21 40.65 42.28 GDT RMS_LOCAL 0.35 0.55 0.55 0.94 1.63 1.91 2.38 2.38 2.85 3.50 3.73 4.09 4.17 4.55 4.72 4.99 6.12 5.46 6.13 6.98 GDT RMS_ALL_AT 19.32 19.69 19.69 19.50 18.64 18.72 18.24 18.24 18.66 18.25 18.27 18.47 18.42 18.34 18.34 18.12 20.26 18.11 18.35 18.62 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 4.744 4 0.238 0.238 4.744 42.024 21.012 LGA K 2 K 2 2.931 5 0.285 0.285 3.698 48.452 21.534 LGA D 3 D 3 5.561 4 0.159 0.159 5.561 33.333 16.667 LGA G 4 G 4 2.732 0 0.462 0.462 3.877 53.690 53.690 LGA T 5 T 5 2.882 3 0.043 0.043 2.945 59.048 33.741 LGA Y 6 Y 6 1.169 8 0.044 0.044 1.797 77.143 25.714 LGA Y 7 Y 7 2.023 8 0.101 0.101 2.023 79.762 26.587 LGA A 8 A 8 1.452 1 0.083 0.083 2.132 72.976 58.381 LGA E 9 E 9 1.712 5 0.111 0.111 2.087 68.810 30.582 LGA A 10 A 10 3.278 1 0.480 0.480 5.522 41.429 33.143 LGA D 11 D 11 6.499 4 0.060 0.060 6.533 20.714 10.357 LGA D 12 D 12 2.901 4 0.701 0.701 3.495 53.571 26.786 LGA F 13 F 13 6.435 7 0.103 0.103 6.435 21.548 7.835 LGA D 14 D 14 5.051 4 0.166 0.166 9.557 14.524 7.262 LGA E 15 E 15 9.293 5 0.648 0.648 11.557 2.857 1.270 LGA S 16 S 16 14.906 2 0.735 0.735 17.861 0.000 0.000 LGA G 17 G 17 19.636 0 0.372 0.372 21.533 0.000 0.000 LGA W 18 W 18 19.547 10 0.627 0.627 19.547 0.000 0.000 LGA K 19 K 19 15.240 5 0.576 0.576 16.878 0.000 0.000 LGA D 20 D 20 15.509 4 0.621 0.621 16.130 0.000 0.000 LGA T 21 T 21 16.942 3 0.639 0.639 16.942 0.000 0.000 LGA V 22 V 22 12.778 3 0.070 0.070 14.136 0.000 0.000 LGA T 23 T 23 14.517 3 0.246 0.246 14.517 0.000 0.000 LGA I 24 I 24 11.288 4 0.006 0.006 12.232 0.000 0.000 LGA E 25 E 25 13.138 5 0.084 0.084 13.138 0.000 0.000 LGA V 26 V 26 9.251 3 0.094 0.094 10.380 0.476 0.272 LGA K 27 K 27 11.530 5 0.065 0.065 11.530 0.357 0.159 LGA N 28 N 28 9.074 4 0.456 0.456 10.203 2.857 1.429 LGA G 29 G 29 6.241 0 0.687 0.687 6.490 22.976 22.976 LGA K 30 K 30 6.666 5 0.527 0.527 6.666 19.524 8.677 LGA I 31 I 31 7.701 4 0.032 0.032 10.028 4.762 2.381 LGA V 32 V 32 8.828 3 0.616 0.616 9.113 4.286 2.449 LGA S 33 S 33 9.148 2 0.164 0.164 9.148 2.143 1.429 LGA V 34 V 34 7.412 3 0.051 0.051 8.044 7.262 4.150 LGA D 35 D 35 7.998 4 0.047 0.047 7.998 8.571 4.286 LGA W 36 W 36 6.707 10 0.206 0.206 7.580 10.119 2.891 LGA N 37 N 37 7.509 4 0.117 0.117 7.509 13.690 6.845 LGA A 38 A 38 5.141 1 0.612 0.612 5.743 22.619 18.095 LGA I 39 I 39 7.673 4 0.414 0.414 7.733 10.357 5.179 LGA N 40 N 40 8.100 4 0.108 0.108 10.895 3.690 1.845 LGA K 41 K 41 13.728 5 0.578 0.578 15.133 0.000 0.000 LGA D 42 D 42 16.163 4 0.642 0.642 19.548 0.000 0.000 LGA G 43 G 43 18.082 0 0.467 0.467 20.911 0.000 0.000 LGA G 44 G 44 20.097 0 0.629 0.629 21.897 0.000 0.000 LGA D 45 D 45 22.407 4 0.688 0.688 22.407 0.000 0.000 LGA D 46 D 46 19.149 4 0.189 0.189 20.108 0.000 0.000 LGA K 47 K 47 19.910 5 0.594 0.594 21.792 0.000 0.000 LGA D 48 D 48 19.594 4 0.560 0.560 21.766 0.000 0.000 LGA T 49 T 49 25.377 3 0.574 0.574 25.941 0.000 0.000 LGA L 50 L 50 26.150 4 0.671 0.671 28.403 0.000 0.000 LGA S 51 S 51 27.611 2 0.175 0.175 28.058 0.000 0.000 LGA R 52 R 52 27.439 7 0.612 0.612 27.993 0.000 0.000 LGA N 53 N 53 27.164 4 0.606 0.606 28.898 0.000 0.000 LGA G 54 G 54 27.122 0 0.280 0.280 27.477 0.000 0.000 LGA G 55 G 55 24.876 0 0.353 0.353 25.347 0.000 0.000 LGA Y 56 Y 56 21.262 8 0.242 0.242 22.698 0.000 0.000 LGA K 57 K 57 20.144 5 0.111 0.111 20.321 0.000 0.000 LGA M 58 M 58 17.240 4 0.017 0.017 18.732 0.000 0.000 LGA V 59 V 59 17.018 3 0.644 0.644 17.245 0.000 0.000 LGA E 60 E 60 14.737 5 0.623 0.623 15.287 0.000 0.000 LGA Y 61 Y 61 13.047 8 0.622 0.622 14.911 0.000 0.000 LGA G 62 G 62 15.010 0 0.429 0.429 15.010 0.000 0.000 LGA G 63 G 63 11.998 0 0.587 0.587 12.966 1.190 1.190 LGA A 64 A 64 10.784 1 0.260 0.260 11.682 0.000 0.000 LGA Q 65 Q 65 10.141 5 0.571 0.571 13.552 0.119 0.053 LGA A 66 A 66 14.511 1 0.328 0.328 15.252 0.000 0.000 LGA E 67 E 67 12.051 5 0.689 0.689 12.100 0.357 0.159 LGA W 68 W 68 8.501 10 0.456 0.456 10.080 5.714 1.633 LGA H 69 H 69 6.292 6 0.449 0.449 6.982 19.524 7.810 LGA E 70 E 70 6.574 5 0.175 0.175 6.574 20.714 9.206 LGA Q 71 Q 71 3.283 5 0.137 0.137 4.120 56.190 24.974 LGA A 72 A 72 1.342 1 0.123 0.123 1.562 79.286 63.429 LGA E 73 E 73 2.695 5 0.047 0.047 2.695 62.857 27.937 LGA K 74 K 74 2.428 5 0.024 0.024 2.428 66.786 29.683 LGA V 75 V 75 1.487 3 0.032 0.032 1.638 77.143 44.082 LGA E 76 E 76 1.366 5 0.059 0.059 1.515 81.548 36.243 LGA A 77 A 77 2.173 1 0.047 0.047 2.173 77.381 61.905 LGA Y 78 Y 78 1.584 8 0.044 0.044 2.608 71.071 23.690 LGA L 79 L 79 2.590 4 0.125 0.125 4.211 56.071 28.036 LGA V 80 V 80 3.037 3 0.147 0.147 4.628 49.048 28.027 LGA E 81 E 81 2.464 5 0.659 0.659 4.636 49.524 22.011 LGA K 82 K 82 7.879 5 0.589 0.589 8.743 9.643 4.286 LGA Q 83 Q 83 7.767 5 0.630 0.630 11.756 5.119 2.275 LGA D 84 D 84 14.555 4 0.371 0.371 15.480 0.000 0.000 LGA P 85 P 85 17.753 3 0.705 0.705 18.646 0.000 0.000 LGA T 86 T 86 19.785 3 0.365 0.365 20.106 0.000 0.000 LGA D 87 D 87 20.947 4 0.198 0.198 21.437 0.000 0.000 LGA I 88 I 88 23.130 4 0.602 0.602 27.694 0.000 0.000 LGA K 89 K 89 29.355 5 0.646 0.646 30.682 0.000 0.000 LGA Y 90 Y 90 31.280 8 0.538 0.538 35.409 0.000 0.000 LGA K 91 K 91 35.160 5 0.446 0.446 37.209 0.000 0.000 LGA D 92 D 92 36.853 4 0.647 0.647 39.681 0.000 0.000 LGA N 93 N 93 41.323 4 0.139 0.139 42.587 0.000 0.000 LGA D 94 D 94 38.879 4 0.329 0.329 39.301 0.000 0.000 LGA G 95 G 95 34.525 0 0.400 0.400 35.960 0.000 0.000 LGA H 96 H 96 35.176 6 0.535 0.535 35.482 0.000 0.000 LGA T 97 T 97 31.598 3 0.073 0.073 32.388 0.000 0.000 LGA D 98 D 98 30.724 4 0.568 0.568 31.290 0.000 0.000 LGA A 99 A 99 26.462 1 0.228 0.228 28.123 0.000 0.000 LGA I 100 I 100 21.040 4 0.125 0.125 23.122 0.000 0.000 LGA S 101 S 101 24.240 2 0.142 0.142 24.240 0.000 0.000 LGA G 102 G 102 22.073 0 0.331 0.331 23.249 0.000 0.000 LGA A 103 A 103 17.248 1 0.052 0.052 20.590 0.000 0.000 LGA T 104 T 104 19.118 3 0.571 0.571 19.118 0.000 0.000 LGA I 105 I 105 16.136 4 0.041 0.041 19.664 0.000 0.000 LGA K 106 K 106 20.638 5 0.186 0.186 21.241 0.000 0.000 LGA V 107 V 107 23.493 3 0.217 0.217 24.136 0.000 0.000 LGA K 108 K 108 25.764 5 0.031 0.031 25.764 0.000 0.000 LGA K 109 K 109 21.475 5 0.062 0.062 22.725 0.000 0.000 LGA F 110 F 110 20.780 7 0.045 0.045 22.427 0.000 0.000 LGA F 111 F 111 25.751 7 0.031 0.031 26.946 0.000 0.000 LGA D 112 D 112 25.708 4 0.024 0.024 25.708 0.000 0.000 LGA L 113 L 113 22.178 4 0.152 0.152 23.128 0.000 0.000 LGA A 114 A 114 23.322 1 0.086 0.086 24.744 0.000 0.000 LGA Q 115 Q 115 27.896 5 0.012 0.012 28.499 0.000 0.000 LGA K 116 K 116 26.172 5 0.076 0.076 26.451 0.000 0.000 LGA A 117 A 117 22.932 1 0.109 0.109 24.477 0.000 0.000 LGA L 118 L 118 26.838 4 0.339 0.339 28.535 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 118 472 472 100.00 929 472 50.81 123 SUMMARY(RMSD_GDC): 13.619 13.574 13.574 13.113 7.108 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 118 123 4.0 20 2.38 17.886 15.507 0.807 LGA_LOCAL RMSD: 2.378 Number of atoms: 20 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.237 Number of assigned atoms: 118 Std_ASGN_ATOMS RMSD: 13.619 Standard rmsd on all 118 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.396635 * X + 0.917976 * Y + -0.001199 * Z + 68.679916 Y_new = -0.438824 * X + -0.188458 * Y + 0.878588 * Z + -28.307262 Z_new = 0.806297 * X + 0.349005 * Y + 0.477579 * Z + -58.918243 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.305739 -0.937864 0.631086 [DEG: -132.1091 -53.7357 36.1586 ] ZXZ: -3.140228 1.072900 1.162296 [DEG: -179.9218 61.4726 66.5947 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0562TS328_1-D1 REMARK 2: T0562-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0562TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 118 123 4.0 20 2.38 15.507 13.62 REMARK ---------------------------------------------------------- MOLECULE T0562TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0562 REMARK MODEL 1 REMARK PARENT 3a79_B ATOM 1 N MET 1 1.647 -10.862 17.960 1.00 3.00 N ATOM 2 CA MET 1 1.870 -12.209 17.441 1.00 3.00 C ATOM 3 C MET 1 3.169 -12.230 16.665 1.00 3.00 C ATOM 4 O MET 1 3.601 -11.200 16.147 1.00 3.00 O ATOM 5 N LYS 2 3.797 -13.393 16.581 1.00 3.00 N ATOM 6 CA LYS 2 5.054 -13.487 15.851 1.00 3.00 C ATOM 7 C LYS 2 4.798 -13.827 14.375 1.00 3.00 C ATOM 8 O LYS 2 5.091 -14.925 13.883 1.00 3.00 O ATOM 9 N ASP 3 4.234 -12.839 13.689 1.00 3.00 N ATOM 10 CA ASP 3 3.834 -12.965 12.305 1.00 3.00 C ATOM 11 C ASP 3 5.019 -13.104 11.354 1.00 3.00 C ATOM 12 O ASP 3 6.099 -12.557 11.602 1.00 3.00 O ATOM 13 N GLY 4 4.791 -13.829 10.256 1.00 3.00 N ATOM 14 CA GLY 4 5.784 -14.002 9.200 1.00 3.00 C ATOM 15 C GLY 4 5.370 -13.348 7.879 1.00 3.00 C ATOM 16 O GLY 4 6.211 -12.785 7.167 1.00 3.00 O ATOM 17 N THR 5 4.084 -13.422 7.541 1.00 3.00 N ATOM 18 CA THR 5 3.596 -12.654 6.402 1.00 3.00 C ATOM 19 C THR 5 2.297 -11.927 6.697 1.00 3.00 C ATOM 20 O THR 5 1.354 -12.505 7.235 1.00 3.00 O ATOM 21 N TYR 6 2.283 -10.643 6.355 1.00 3.00 N ATOM 22 CA TYR 6 1.066 -9.854 6.273 1.00 3.00 C ATOM 23 C TYR 6 0.855 -9.499 4.811 1.00 3.00 C ATOM 24 O TYR 6 1.591 -8.703 4.228 1.00 3.00 O ATOM 25 N TYR 7 -0.132 -10.134 4.204 1.00 3.00 N ATOM 26 CA TYR 7 -0.494 -9.804 2.846 1.00 3.00 C ATOM 27 C TYR 7 -1.669 -8.845 2.926 1.00 3.00 C ATOM 28 O TYR 7 -2.659 -9.130 3.592 1.00 3.00 O ATOM 29 N ALA 8 -1.549 -7.705 2.256 1.00 3.00 N ATOM 30 CA ALA 8 -2.564 -6.660 2.330 1.00 3.00 C ATOM 31 C ALA 8 -2.810 -6.031 0.968 1.00 3.00 C ATOM 32 O ALA 8 -1.872 -5.613 0.287 1.00 3.00 O ATOM 33 N GLU 9 -4.068 -5.965 0.556 1.00 3.00 N ATOM 34 CA GLU 9 -4.344 -5.428 -0.763 1.00 3.00 C ATOM 35 C GLU 9 -5.288 -4.238 -0.759 1.00 3.00 C ATOM 36 O GLU 9 -6.331 -4.227 -0.099 1.00 3.00 O ATOM 37 N ALA 10 -4.899 -3.254 -1.551 1.00 3.00 N ATOM 38 CA ALA 10 -5.554 -1.973 -1.630 1.00 3.00 C ATOM 39 C ALA 10 -6.182 -1.873 -3.008 1.00 3.00 C ATOM 40 O ALA 10 -6.169 -0.816 -3.640 1.00 3.00 O ATOM 41 N ASP 11 -6.688 -2.987 -3.512 1.00 3.00 N ATOM 42 CA ASP 11 -7.362 -2.954 -4.798 1.00 3.00 C ATOM 43 C ASP 11 -8.664 -2.181 -4.615 1.00 3.00 C ATOM 44 O ASP 11 -9.024 -1.342 -5.443 1.00 3.00 O ATOM 45 N ASP 12 -9.342 -2.450 -3.501 1.00 3.00 N ATOM 46 CA ASP 12 -10.630 -1.836 -3.204 1.00 3.00 C ATOM 47 C ASP 12 -10.526 -0.350 -2.838 1.00 3.00 C ATOM 48 O ASP 12 -11.541 0.314 -2.643 1.00 3.00 O ATOM 49 N PHE 13 -9.303 0.167 -2.763 1.00 3.00 N ATOM 50 CA PHE 13 -9.034 1.479 -2.168 1.00 3.00 C ATOM 51 C PHE 13 -9.053 2.666 -3.132 1.00 3.00 C ATOM 52 O PHE 13 -8.376 2.666 -4.152 1.00 3.00 O ATOM 53 N ASP 14 -9.821 3.689 -2.774 1.00 3.00 N ATOM 54 CA ASP 14 -9.857 4.936 -3.519 1.00 3.00 C ATOM 55 C ASP 14 -9.442 6.032 -2.549 1.00 3.00 C ATOM 56 O ASP 14 -9.521 5.831 -1.340 1.00 3.00 O ATOM 57 N GLU 15 -8.962 7.159 -3.075 1.00 3.00 N ATOM 58 CA GLU 15 -8.586 8.320 -2.263 1.00 3.00 C ATOM 59 C GLU 15 -9.837 8.946 -1.678 1.00 3.00 C ATOM 60 O GLU 15 -10.903 8.867 -2.284 1.00 3.00 O ATOM 61 N SER 16 -9.722 9.565 -0.506 1.00 3.00 N ATOM 62 CA SER 16 -10.868 10.277 0.068 1.00 3.00 C ATOM 63 C SER 16 -10.216 11.502 0.685 1.00 3.00 C ATOM 64 O SER 16 -9.011 11.679 0.583 1.00 3.00 O ATOM 65 N GLY 17 -10.990 12.352 1.349 1.00 3.00 N ATOM 66 CA GLY 17 -10.418 13.540 1.962 1.00 3.00 C ATOM 67 C GLY 17 -9.548 13.129 3.132 1.00 3.00 C ATOM 68 O GLY 17 -8.399 13.550 3.250 1.00 3.00 O ATOM 69 N TRP 18 -10.113 12.295 3.993 1.00 3.00 N ATOM 70 CA TRP 18 -9.427 11.807 5.185 1.00 3.00 C ATOM 71 C TRP 18 -8.234 10.887 4.919 1.00 3.00 C ATOM 72 O TRP 18 -7.556 10.481 5.870 1.00 3.00 O ATOM 73 N LYS 19 -7.978 10.568 3.646 1.00 9.00 N ATOM 74 CA LYS 19 -6.837 9.714 3.312 1.00 9.00 C ATOM 75 C LYS 19 -5.546 10.484 3.609 1.00 9.00 C ATOM 76 O LYS 19 -4.471 9.891 3.782 1.00 9.00 O ATOM 77 N ASP 20 -5.665 11.808 3.662 1.00 3.00 N ATOM 78 CA ASP 20 -4.527 12.655 3.956 1.00 3.00 C ATOM 79 C ASP 20 -4.011 12.287 5.335 1.00 3.00 C ATOM 80 O ASP 20 -2.850 12.550 5.673 1.00 3.00 O ATOM 81 N THR 21 -4.893 11.682 6.134 1.00 3.00 N ATOM 82 CA THR 21 -4.585 11.235 7.485 1.00 3.00 C ATOM 83 C THR 21 -4.554 9.697 7.499 1.00 3.00 C ATOM 84 O THR 21 -3.807 9.095 8.273 1.00 3.00 O ATOM 85 N VAL 22 -5.382 9.099 6.640 1.00 3.00 N ATOM 86 CA VAL 22 -5.535 7.653 6.438 1.00 3.00 C ATOM 87 C VAL 22 -4.182 7.160 6.965 1.00 3.00 C ATOM 88 O VAL 22 -3.148 7.326 6.316 1.00 3.00 O ATOM 89 N THR 23 -4.175 6.591 8.162 1.00 3.00 N ATOM 90 CA THR 23 -2.951 6.037 8.707 1.00 3.00 C ATOM 91 C THR 23 -3.169 4.551 8.883 1.00 3.00 C ATOM 92 O THR 23 -4.287 4.058 8.750 1.00 3.00 O ATOM 93 N ILE 24 -2.099 3.832 9.186 1.00 3.00 N ATOM 94 CA ILE 24 -2.217 2.427 9.514 1.00 3.00 C ATOM 95 C ILE 24 -0.912 1.902 10.075 1.00 3.00 C ATOM 96 O ILE 24 0.119 1.915 9.411 1.00 3.00 O ATOM 97 N GLU 25 -0.962 1.452 11.316 1.00 3.00 N ATOM 98 CA GLU 25 0.208 0.909 11.958 1.00 3.00 C ATOM 99 C GLU 25 0.283 -0.553 11.573 1.00 3.00 C ATOM 100 O GLU 25 -0.663 -1.298 11.822 1.00 3.00 O ATOM 101 N VAL 26 1.393 -0.951 10.952 1.00 3.00 N ATOM 102 CA VAL 26 1.645 -2.356 10.625 1.00 3.00 C ATOM 103 C VAL 26 2.385 -3.105 11.735 1.00 3.00 C ATOM 104 O VAL 26 3.504 -2.742 12.096 1.00 3.00 O ATOM 105 N LYS 27 1.764 -4.168 12.268 1.00 3.00 N ATOM 106 CA LYS 27 2.373 -4.985 13.324 1.00 3.00 C ATOM 107 C LYS 27 3.726 -5.500 12.869 1.00 3.00 C ATOM 108 O LYS 27 3.948 -5.582 11.665 1.00 3.00 O ATOM 109 N ASN 28 4.617 -5.839 13.797 1.00 3.00 N ATOM 110 CA ASN 28 5.908 -6.398 13.398 1.00 3.00 C ATOM 111 C ASN 28 5.716 -7.667 12.574 1.00 3.00 C ATOM 112 O ASN 28 5.094 -8.625 13.033 1.00 3.00 O ATOM 113 N GLY 29 6.230 -7.658 11.347 1.00 3.00 N ATOM 114 CA GLY 29 6.170 -8.826 10.467 1.00 3.00 C ATOM 115 C GLY 29 7.526 -9.044 9.854 1.00 3.00 C ATOM 116 O GLY 29 8.252 -8.087 9.607 1.00 3.00 O ATOM 117 N LYS 30 7.873 -10.294 9.588 1.00 3.00 N ATOM 118 CA LYS 30 9.025 -10.547 8.733 1.00 3.00 C ATOM 119 C LYS 30 8.793 -9.958 7.325 1.00 3.00 C ATOM 120 O LYS 30 9.584 -9.141 6.833 1.00 3.00 O ATOM 121 N ILE 31 7.697 -10.350 6.687 1.00 3.00 N ATOM 122 CA ILE 31 7.398 -9.842 5.358 1.00 3.00 C ATOM 123 C ILE 31 6.129 -8.997 5.346 1.00 3.00 C ATOM 124 O ILE 31 5.138 -9.342 5.983 1.00 3.00 O ATOM 125 N VAL 32 6.172 -7.873 4.639 1.00 3.00 N ATOM 126 CA VAL 32 4.957 -7.123 4.351 1.00 3.00 C ATOM 127 C VAL 32 4.762 -7.042 2.852 1.00 3.00 C ATOM 128 O VAL 32 5.572 -6.438 2.156 1.00 3.00 O ATOM 129 N SER 33 3.691 -7.654 2.361 1.00 3.00 N ATOM 130 CA SER 33 3.394 -7.653 0.933 1.00 3.00 C ATOM 131 C SER 33 2.137 -6.840 0.663 1.00 3.00 C ATOM 132 O SER 33 1.055 -7.134 1.192 1.00 3.00 O ATOM 133 N VAL 34 2.291 -5.816 -0.168 1.00 3.00 N ATOM 134 CA VAL 34 1.190 -4.927 -0.491 1.00 3.00 C ATOM 135 C VAL 34 0.843 -5.023 -1.975 1.00 3.00 C ATOM 136 O VAL 34 1.711 -4.895 -2.836 1.00 3.00 O ATOM 137 N ASP 35 -0.428 -5.260 -2.269 1.00 3.00 N ATOM 138 CA ASP 35 -0.877 -5.351 -3.654 1.00 3.00 C ATOM 139 C ASP 35 -1.858 -4.217 -3.941 1.00 3.00 C ATOM 140 O ASP 35 -2.784 -3.984 -3.164 1.00 3.00 O ATOM 141 N TRP 36 -1.657 -3.518 -5.056 1.00 3.00 N ATOM 142 CA TRP 36 -2.500 -2.380 -5.412 1.00 3.00 C ATOM 143 C TRP 36 -3.392 -2.673 -6.608 1.00 3.00 C ATOM 144 O TRP 36 -3.270 -3.717 -7.247 1.00 3.00 O ATOM 145 N ASN 37 -4.298 -1.750 -6.906 1.00 3.00 N ATOM 146 CA ASN 37 -5.139 -1.887 -8.081 1.00 3.00 C ATOM 147 C ASN 37 -4.233 -2.000 -9.287 1.00 3.00 C ATOM 148 O ASN 37 -3.308 -1.208 -9.443 1.00 3.00 O ATOM 149 N ALA 38 -4.508 -2.984 -10.155 1.00 3.00 N ATOM 150 CA ALA 38 -3.609 -3.406 -11.230 1.00 3.00 C ATOM 151 C ALA 38 -3.852 -2.654 -12.533 1.00 3.00 C ATOM 152 O ALA 38 -3.244 -2.994 -13.551 1.00 3.00 O ATOM 153 N ILE 39 -4.727 -1.657 -12.502 1.00 3.00 N ATOM 154 CA ILE 39 -5.146 -0.996 -13.725 1.00 3.00 C ATOM 155 C ILE 39 -5.294 0.496 -13.584 1.00 3.00 C ATOM 156 O ILE 39 -6.289 1.074 -14.024 1.00 3.00 O ATOM 157 N ASN 40 -4.308 1.125 -12.968 1.00 3.00 N ATOM 158 CA ASN 40 -4.370 2.561 -12.777 1.00 3.00 C ATOM 159 C ASN 40 -3.079 3.094 -12.214 1.00 3.00 C ATOM 160 O ASN 40 -2.197 2.341 -11.788 1.00 3.00 O ATOM 161 N LYS 41 -2.981 4.414 -12.230 1.00 3.00 N ATOM 162 CA LYS 41 -1.853 5.081 -11.644 1.00 3.00 C ATOM 163 C LYS 41 -1.893 4.780 -10.159 1.00 3.00 C ATOM 164 O LYS 41 -2.966 4.700 -9.570 1.00 3.00 O ATOM 165 N ASP 42 -0.723 4.551 -9.571 1.00 3.00 N ATOM 166 CA ASP 42 -0.614 4.277 -8.148 1.00 3.00 C ATOM 167 C ASP 42 -1.055 5.511 -7.394 1.00 3.00 C ATOM 168 O ASP 42 -0.505 6.595 -7.600 1.00 3.00 O ATOM 169 N GLY 43 -2.047 5.368 -6.522 1.00 3.00 N ATOM 170 CA GLY 43 -2.578 6.551 -5.853 1.00 3.00 C ATOM 171 C GLY 43 -2.885 6.321 -4.386 1.00 3.00 C ATOM 172 O GLY 43 -3.967 6.640 -3.922 1.00 3.00 O ATOM 173 N GLY 44 -1.936 5.774 -3.646 1.00 3.00 N ATOM 174 CA GLY 44 -2.175 5.568 -2.230 1.00 3.00 C ATOM 175 C GLY 44 -1.594 6.688 -1.359 1.00 3.00 C ATOM 176 O GLY 44 -0.415 7.048 -1.474 1.00 3.00 O ATOM 177 N ASP 45 -2.451 7.230 -0.495 1.00 3.00 N ATOM 178 CA ASP 45 -2.080 8.300 0.418 1.00 3.00 C ATOM 179 C ASP 45 -2.097 7.865 1.886 1.00 3.00 C ATOM 180 O ASP 45 -1.911 8.682 2.775 1.00 3.00 O ATOM 181 N ASP 46 -2.335 6.586 2.140 1.00 3.00 N ATOM 182 CA ASP 46 -2.287 6.049 3.491 1.00 3.00 C ATOM 183 C ASP 46 -0.884 6.152 4.087 1.00 3.00 C ATOM 184 O ASP 46 0.101 5.734 3.473 1.00 3.00 O ATOM 185 N LYS 47 -0.807 6.715 5.291 1.00 3.00 N ATOM 186 CA LYS 47 0.439 6.788 6.053 1.00 3.00 C ATOM 187 C LYS 47 0.691 5.451 6.771 1.00 3.00 C ATOM 188 O LYS 47 0.018 5.133 7.753 1.00 3.00 O ATOM 189 N ASP 48 1.644 4.661 6.278 1.00 3.00 N ATOM 190 CA ASP 48 1.893 3.337 6.852 1.00 3.00 C ATOM 191 C ASP 48 3.150 3.217 7.686 1.00 3.00 C ATOM 192 O ASP 48 4.256 3.196 7.157 1.00 3.00 O ATOM 193 N THR 49 2.980 3.088 8.992 1.00 3.00 N ATOM 194 CA THR 49 4.119 2.837 9.857 1.00 3.00 C ATOM 195 C THR 49 4.441 1.346 10.000 1.00 3.00 C ATOM 196 O THR 49 3.561 0.487 9.908 1.00 3.00 O ATOM 197 N LEU 50 5.718 1.053 10.202 1.00 3.00 N ATOM 198 CA LEU 50 6.149 -0.277 10.579 1.00 3.00 C ATOM 199 C LEU 50 7.315 -0.131 11.538 1.00 3.00 C ATOM 200 O LEU 50 8.116 0.785 11.396 1.00 3.00 O ATOM 201 N SER 51 7.410 -1.030 12.511 1.00 3.00 N ATOM 202 CA SER 51 8.564 -1.062 13.397 1.00 3.00 C ATOM 203 C SER 51 9.604 -2.049 12.882 1.00 3.00 C ATOM 204 O SER 51 10.637 -1.664 12.328 1.00 3.00 O ATOM 205 N ARG 52 9.320 -3.333 13.069 1.00 3.00 N ATOM 206 CA ARG 52 10.245 -4.381 12.671 1.00 3.00 C ATOM 207 C ARG 52 9.805 -4.996 11.350 1.00 3.00 C ATOM 208 O ARG 52 8.721 -5.570 11.264 1.00 3.00 O ATOM 209 N ASN 53 10.651 -4.874 10.326 1.00 3.00 N ATOM 210 CA ASN 53 10.318 -5.352 8.991 1.00 3.00 C ATOM 211 C ASN 53 11.537 -5.946 8.298 1.00 3.00 C ATOM 212 O ASN 53 12.599 -5.339 8.278 1.00 3.00 O ATOM 213 N GLY 54 11.391 -7.137 7.736 1.00 3.00 N ATOM 214 CA GLY 54 12.515 -7.785 7.100 1.00 3.00 C ATOM 215 C GLY 54 12.483 -7.558 5.606 1.00 3.00 C ATOM 216 O GLY 54 13.515 -7.369 4.960 1.00 3.00 O ATOM 217 N GLY 55 11.276 -7.565 5.058 1.00 3.00 N ATOM 218 CA GLY 55 11.094 -7.503 3.623 1.00 3.00 C ATOM 219 C GLY 55 9.798 -6.772 3.335 1.00 3.00 C ATOM 220 O GLY 55 8.720 -7.186 3.763 1.00 3.00 O ATOM 221 N TYR 56 9.918 -5.650 2.644 1.00 3.00 N ATOM 222 CA TYR 56 8.755 -4.944 2.155 1.00 3.00 C ATOM 223 C TYR 56 8.580 -5.374 0.725 1.00 3.00 C ATOM 224 O TYR 56 9.560 -5.511 -0.001 1.00 3.00 O ATOM 225 N LYS 57 7.345 -5.594 0.305 1.00 3.00 N ATOM 226 CA LYS 57 7.122 -5.972 -1.078 1.00 3.00 C ATOM 227 C LYS 57 5.857 -5.385 -1.681 1.00 3.00 C ATOM 228 O LYS 57 4.755 -5.605 -1.172 1.00 3.00 O ATOM 229 N MET 58 6.030 -4.639 -2.771 1.00 3.00 N ATOM 230 CA MET 58 4.921 -3.940 -3.410 1.00 3.00 C ATOM 231 C MET 58 4.686 -4.501 -4.796 1.00 3.00 C ATOM 232 O MET 58 5.640 -4.737 -5.533 1.00 3.00 O ATOM 233 N VAL 59 3.415 -4.668 -5.156 1.00 3.00 N ATOM 234 CA VAL 59 3.031 -5.222 -6.449 1.00 3.00 C ATOM 235 C VAL 59 1.994 -4.361 -7.173 1.00 3.00 C ATOM 236 O VAL 59 1.059 -3.859 -6.557 1.00 3.00 O ATOM 237 N GLU 60 2.166 -4.215 -8.487 1.00 3.00 N ATOM 238 CA GLU 60 1.295 -3.385 -9.322 1.00 3.00 C ATOM 239 C GLU 60 1.099 -1.950 -9.877 1.00 3.00 C ATOM 240 O GLU 60 0.870 -1.780 -11.076 1.00 3.00 O ATOM 241 N TYR 61 1.220 -0.971 -8.986 1.00 3.00 N ATOM 242 CA TYR 61 0.983 0.421 -9.367 1.00 3.00 C ATOM 243 C TYR 61 2.095 1.424 -9.134 1.00 3.00 C ATOM 244 O TYR 61 2.901 1.325 -8.216 1.00 3.00 O ATOM 245 N GLY 62 2.113 2.420 -10.021 1.00 3.00 N ATOM 246 CA GLY 62 3.107 3.481 -9.986 1.00 3.00 C ATOM 247 C GLY 62 2.443 4.808 -10.364 1.00 3.00 C ATOM 248 O GLY 62 1.482 4.815 -11.122 1.00 3.00 O ATOM 249 N GLY 63 2.964 5.925 -9.835 1.00 9.00 N ATOM 250 CA GLY 63 2.428 7.230 -10.195 1.00 9.00 C ATOM 251 C GLY 63 2.550 7.391 -11.715 1.00 9.00 C ATOM 252 O GLY 63 1.828 8.163 -12.345 1.00 9.00 O ATOM 253 N ALA 64 3.486 6.681 -12.322 1.00 3.00 N ATOM 254 CA ALA 64 3.575 6.750 -13.767 1.00 3.00 C ATOM 255 C ALA 64 4.406 7.840 -14.418 1.00 3.00 C ATOM 256 O ALA 64 5.589 7.984 -14.133 1.00 3.00 O ATOM 257 N GLN 65 3.759 8.596 -15.305 1.00 3.00 N ATOM 258 CA GLN 65 4.415 9.642 -16.085 1.00 3.00 C ATOM 259 C GLN 65 5.517 10.418 -15.389 1.00 3.00 C ATOM 260 O GLN 65 6.634 10.510 -15.896 1.00 3.00 O ATOM 261 N ALA 66 5.234 10.979 -14.220 1.00 3.00 N ATOM 262 CA ALA 66 6.250 11.764 -13.519 1.00 3.00 C ATOM 263 C ALA 66 5.329 12.481 -12.533 1.00 3.00 C ATOM 264 O ALA 66 5.769 12.922 -11.467 1.00 3.00 O ATOM 265 N GLU 67 4.044 12.556 -12.886 1.00 3.00 N ATOM 266 CA GLU 67 3.031 13.261 -12.100 1.00 3.00 C ATOM 267 C GLU 67 2.641 12.575 -10.785 1.00 3.00 C ATOM 268 O GLU 67 2.092 13.221 -9.891 1.00 3.00 O ATOM 269 N TRP 68 2.905 11.273 -10.674 1.00 3.00 N ATOM 270 CA TRP 68 2.601 10.531 -9.449 1.00 3.00 C ATOM 271 C TRP 68 3.813 9.798 -8.896 1.00 3.00 C ATOM 272 O TRP 68 3.688 8.998 -7.963 1.00 3.00 O ATOM 273 N HIS 69 4.980 10.076 -9.477 1.00 3.00 N ATOM 274 CA HIS 69 6.241 9.513 -9.004 1.00 3.00 C ATOM 275 C HIS 69 6.402 9.769 -7.511 1.00 3.00 C ATOM 276 O HIS 69 6.633 8.836 -6.740 1.00 3.00 O ATOM 277 N GLU 70 6.258 11.034 -7.109 1.00 3.00 N ATOM 278 CA GLU 70 6.466 11.426 -5.717 1.00 3.00 C ATOM 279 C GLU 70 5.464 10.792 -4.753 1.00 3.00 C ATOM 280 O GLU 70 5.819 10.463 -3.621 1.00 3.00 O ATOM 281 N GLN 71 4.221 10.626 -5.194 1.00 3.00 N ATOM 282 CA GLN 71 3.215 9.924 -4.389 1.00 3.00 C ATOM 283 C GLN 71 3.748 8.591 -3.850 1.00 3.00 C ATOM 284 O GLN 71 3.549 8.273 -2.667 1.00 3.00 O ATOM 285 N ALA 72 4.416 7.823 -4.720 1.00 3.00 N ATOM 286 CA ALA 72 5.013 6.544 -4.332 1.00 3.00 C ATOM 287 C ALA 72 6.187 6.698 -3.381 1.00 3.00 C ATOM 288 O ALA 72 6.326 5.923 -2.439 1.00 3.00 O ATOM 289 N GLU 73 7.045 7.681 -3.643 1.00 3.00 N ATOM 290 CA GLU 73 8.212 7.919 -2.793 1.00 3.00 C ATOM 291 C GLU 73 7.813 8.323 -1.376 1.00 3.00 C ATOM 292 O GLU 73 8.468 7.939 -0.407 1.00 3.00 O ATOM 293 N LYS 74 6.728 9.087 -1.265 1.00 3.00 N ATOM 294 CA LYS 74 6.174 9.468 0.032 1.00 3.00 C ATOM 295 C LYS 74 5.593 8.268 0.782 1.00 3.00 C ATOM 296 O LYS 74 5.822 8.089 1.989 1.00 3.00 O ATOM 297 N VAL 75 4.813 7.466 0.061 1.00 3.00 N ATOM 298 CA VAL 75 4.170 6.310 0.654 1.00 3.00 C ATOM 299 C VAL 75 5.224 5.342 1.177 1.00 3.00 C ATOM 300 O VAL 75 5.018 4.674 2.198 1.00 3.00 O ATOM 301 N GLU 76 6.356 5.284 0.483 1.00 3.00 N ATOM 302 CA GLU 76 7.428 4.350 0.818 1.00 3.00 C ATOM 303 C GLU 76 8.241 4.891 1.972 1.00 3.00 C ATOM 304 O GLU 76 8.783 4.133 2.779 1.00 3.00 O ATOM 305 N ALA 77 8.333 6.214 2.023 1.00 3.00 N ATOM 306 CA ALA 77 9.183 6.896 2.991 1.00 3.00 C ATOM 307 C ALA 77 9.056 6.354 4.409 1.00 3.00 C ATOM 308 O ALA 77 10.059 6.194 5.095 1.00 3.00 O ATOM 309 N TYR 78 7.835 6.066 4.844 1.00 3.00 N ATOM 310 CA TYR 78 7.607 5.649 6.224 1.00 3.00 C ATOM 311 C TYR 78 7.680 4.129 6.468 1.00 3.00 C ATOM 312 O TYR 78 7.940 3.689 7.587 1.00 3.00 O ATOM 313 N LEU 79 7.452 3.326 5.434 1.00 3.00 N ATOM 314 CA LEU 79 7.642 1.882 5.557 1.00 3.00 C ATOM 315 C LEU 79 9.136 1.595 5.522 1.00 3.00 C ATOM 316 O LEU 79 9.599 0.526 5.909 1.00 3.00 O ATOM 317 N VAL 80 9.888 2.589 5.075 1.00 3.00 N ATOM 318 CA VAL 80 11.305 2.428 4.797 1.00 3.00 C ATOM 319 C VAL 80 12.238 3.059 5.831 1.00 3.00 C ATOM 320 O VAL 80 13.424 2.724 5.889 1.00 3.00 O ATOM 321 N GLU 81 11.713 3.984 6.635 1.00 3.00 N ATOM 322 CA GLU 81 12.491 4.539 7.738 1.00 3.00 C ATOM 323 C GLU 81 13.023 3.348 8.520 1.00 3.00 C ATOM 324 O GLU 81 12.319 2.352 8.715 1.00 3.00 O ATOM 325 N LYS 82 14.275 3.436 8.939 1.00 3.00 N ATOM 326 CA LYS 82 14.964 2.250 9.395 1.00 3.00 C ATOM 327 C LYS 82 15.299 2.061 10.863 1.00 3.00 C ATOM 328 O LYS 82 16.099 2.810 11.447 1.00 3.00 O ATOM 329 N GLN 83 14.662 1.061 11.486 1.00 3.00 N ATOM 330 CA GLN 83 15.481 0.351 12.463 1.00 3.00 C ATOM 331 C GLN 83 16.671 -0.247 11.706 1.00 3.00 C ATOM 332 O GLN 83 17.449 0.486 11.077 1.00 3.00 O ATOM 333 N ASP 84 16.804 -1.567 11.739 1.00 3.00 N ATOM 334 CA ASP 84 17.935 -2.205 11.079 1.00 3.00 C ATOM 335 C ASP 84 17.777 -2.209 9.553 1.00 3.00 C ATOM 336 O ASP 84 17.227 -1.267 8.981 1.00 3.00 O ATOM 337 N PRO 85 18.272 -3.260 8.902 1.00 3.00 N ATOM 338 CA PRO 85 18.196 -3.378 7.447 1.00 3.00 C ATOM 339 C PRO 85 16.937 -4.114 7.032 1.00 3.00 C ATOM 340 O PRO 85 16.339 -4.830 7.830 1.00 3.00 O ATOM 341 N THR 86 16.540 -3.929 5.781 1.00 3.00 N ATOM 342 CA THR 86 15.422 -4.669 5.210 1.00 3.00 C ATOM 343 C THR 86 14.663 -4.290 3.950 1.00 3.00 C ATOM 344 O THR 86 13.458 -4.068 3.986 1.00 3.00 O ATOM 345 N ASP 87 15.386 -4.191 2.839 1.00 3.00 N ATOM 346 CA ASP 87 14.774 -3.821 1.570 1.00 3.00 C ATOM 347 C ASP 87 14.320 -4.999 0.725 1.00 3.00 C ATOM 348 O ASP 87 14.664 -6.150 0.972 1.00 3.00 O ATOM 349 N ILE 88 13.524 -4.687 -0.300 1.00 3.00 N ATOM 350 CA ILE 88 13.022 -5.705 -1.185 1.00 3.00 C ATOM 351 C ILE 88 14.209 -6.387 -1.856 1.00 3.00 C ATOM 352 O ILE 88 14.227 -7.604 -2.004 1.00 3.00 O ATOM 353 N LYS 89 15.203 -5.590 -2.244 1.00 9.00 N ATOM 354 CA LYS 89 16.395 -6.133 -2.902 1.00 9.00 C ATOM 355 C LYS 89 17.176 -7.103 -2.019 1.00 9.00 C ATOM 356 O LYS 89 17.835 -8.004 -2.535 1.00 9.00 O ATOM 357 N TYR 90 17.090 -6.927 -0.700 1.00 9.00 N ATOM 358 CA TYR 90 17.784 -7.836 0.200 1.00 9.00 C ATOM 359 C TYR 90 17.200 -9.233 0.037 1.00 9.00 C ATOM 360 O TYR 90 17.914 -10.157 -0.366 1.00 9.00 O ATOM 361 N LYS 91 15.917 -9.389 0.333 1.00 9.00 N ATOM 362 CA LYS 91 15.275 -10.696 0.210 1.00 9.00 C ATOM 363 C LYS 91 15.284 -11.189 -1.239 1.00 9.00 C ATOM 364 O LYS 91 14.973 -12.351 -1.521 1.00 9.00 O ATOM 365 N ASP 92 15.653 -10.287 -2.157 1.00 9.00 N ATOM 366 CA ASP 92 15.757 -10.616 -3.576 1.00 9.00 C ATOM 367 C ASP 92 17.174 -11.116 -3.817 1.00 9.00 C ATOM 368 O ASP 92 17.694 -11.071 -4.927 1.00 9.00 O ATOM 369 N ASN 93 17.774 -11.590 -2.726 1.00 9.00 N ATOM 370 CA ASN 93 19.118 -12.129 -2.714 1.00 9.00 C ATOM 371 C ASN 93 18.956 -13.652 -2.759 1.00 9.00 C ATOM 372 O ASN 93 19.875 -14.396 -3.087 1.00 9.00 O ATOM 373 N ASP 94 17.744 -14.091 -2.421 1.00 9.00 N ATOM 374 CA ASP 94 17.417 -15.504 -2.406 1.00 9.00 C ATOM 375 C ASP 94 16.171 -15.787 -3.259 1.00 9.00 C ATOM 376 O ASP 94 15.734 -16.926 -3.371 1.00 9.00 O ATOM 377 N GLY 95 15.621 -14.739 -3.871 1.00 9.00 N ATOM 378 CA GLY 95 14.430 -14.880 -4.713 1.00 9.00 C ATOM 379 C GLY 95 14.572 -14.169 -6.059 1.00 9.00 C ATOM 380 O GLY 95 15.020 -13.032 -6.128 1.00 9.00 O ATOM 381 N HIS 96 14.179 -14.861 -7.126 1.00 9.00 N ATOM 382 CA HIS 96 14.263 -14.301 -8.478 1.00 9.00 C ATOM 383 C HIS 96 13.008 -13.522 -8.854 1.00 9.00 C ATOM 384 O HIS 96 12.743 -13.293 -10.033 1.00 9.00 O ATOM 385 N THR 97 12.240 -13.121 -7.849 1.00 9.00 N ATOM 386 CA THR 97 11.023 -12.353 -8.073 1.00 9.00 C ATOM 387 C THR 97 11.403 -10.916 -8.441 1.00 9.00 C ATOM 388 O THR 97 12.467 -10.439 -8.050 1.00 9.00 O ATOM 389 N ASP 98 10.529 -10.249 -9.181 1.00 9.00 N ATOM 390 CA ASP 98 10.799 -8.874 -9.602 1.00 9.00 C ATOM 391 C ASP 98 10.688 -7.832 -8.475 1.00 9.00 C ATOM 392 O ASP 98 9.640 -7.706 -7.839 1.00 9.00 O ATOM 393 N ALA 99 11.781 -7.109 -8.244 1.00 3.00 N ATOM 394 CA ALA 99 11.820 -6.076 -7.199 1.00 3.00 C ATOM 395 C ALA 99 10.606 -5.162 -7.293 1.00 3.00 C ATOM 396 O ALA 99 9.739 -5.178 -6.417 1.00 3.00 O ATOM 397 N ILE 100 10.567 -4.367 -8.348 1.00 3.00 N ATOM 398 CA ILE 100 9.461 -3.434 -8.574 1.00 3.00 C ATOM 399 C ILE 100 8.139 -4.159 -8.422 1.00 3.00 C ATOM 400 O ILE 100 7.170 -3.597 -7.891 1.00 3.00 O ATOM 401 N SER 101 8.085 -5.406 -8.877 1.00 3.00 N ATOM 402 CA SER 101 6.878 -6.221 -8.791 1.00 3.00 C ATOM 403 C SER 101 5.896 -5.557 -9.740 1.00 3.00 C ATOM 404 O SER 101 4.992 -4.846 -9.310 1.00 3.00 O ATOM 405 N GLY 102 6.071 -5.788 -11.032 1.00 3.00 N ATOM 406 CA GLY 102 5.184 -5.192 -12.026 1.00 3.00 C ATOM 407 C GLY 102 5.159 -3.653 -12.070 1.00 3.00 C ATOM 408 O GLY 102 4.098 -3.054 -12.230 1.00 3.00 O ATOM 409 N ALA 103 6.328 -3.024 -11.959 1.00 3.00 N ATOM 410 CA ALA 103 6.446 -1.567 -12.027 1.00 3.00 C ATOM 411 C ALA 103 6.546 -1.096 -13.463 1.00 3.00 C ATOM 412 O ALA 103 7.503 -1.414 -14.156 1.00 3.00 O ATOM 413 N THR 104 5.561 -0.335 -13.913 1.00 3.00 N ATOM 414 CA THR 104 5.682 0.362 -15.177 1.00 3.00 C ATOM 415 C THR 104 5.940 1.799 -14.837 1.00 3.00 C ATOM 416 O THR 104 5.143 2.421 -14.142 1.00 3.00 O ATOM 417 N ILE 105 7.048 2.341 -15.318 1.00 3.00 N ATOM 418 CA ILE 105 7.472 3.652 -14.849 1.00 3.00 C ATOM 419 C ILE 105 8.261 4.405 -15.905 1.00 3.00 C ATOM 420 O ILE 105 8.849 3.804 -16.790 1.00 3.00 O ATOM 421 N LYS 106 8.251 5.725 -15.819 1.00 3.00 N ATOM 422 CA LYS 106 9.180 6.551 -16.578 1.00 3.00 C ATOM 423 C LYS 106 10.628 6.174 -16.283 1.00 3.00 C ATOM 424 O LYS 106 10.919 5.542 -15.271 1.00 3.00 O ATOM 425 N VAL 107 11.545 6.560 -17.161 1.00 3.00 N ATOM 426 CA VAL 107 12.952 6.446 -16.822 1.00 3.00 C ATOM 427 C VAL 107 13.308 7.489 -15.759 1.00 3.00 C ATOM 428 O VAL 107 13.949 7.154 -14.759 1.00 3.00 O ATOM 429 N LYS 108 12.890 8.739 -15.973 1.00 3.00 N ATOM 430 CA LYS 108 13.083 9.811 -14.981 1.00 3.00 C ATOM 431 C LYS 108 12.714 9.324 -13.581 1.00 3.00 C ATOM 432 O LYS 108 13.451 9.545 -12.612 1.00 3.00 O ATOM 433 N LYS 109 11.572 8.647 -13.490 1.00 3.00 N ATOM 434 CA LYS 109 11.053 8.192 -12.215 1.00 3.00 C ATOM 435 C LYS 109 11.841 7.006 -11.673 1.00 3.00 C ATOM 436 O LYS 109 11.889 6.781 -10.466 1.00 3.00 O ATOM 437 N PHE 110 12.451 6.235 -12.561 1.00 3.00 N ATOM 438 CA PHE 110 13.223 5.083 -12.119 1.00 3.00 C ATOM 439 C PHE 110 14.520 5.542 -11.476 1.00 3.00 C ATOM 440 O PHE 110 14.918 5.042 -10.423 1.00 3.00 O ATOM 441 N PHE 111 15.161 6.520 -12.107 1.00 3.00 N ATOM 442 CA PHE 111 16.365 7.138 -11.570 1.00 3.00 C ATOM 443 C PHE 111 16.081 7.856 -10.234 1.00 3.00 C ATOM 444 O PHE 111 16.942 7.935 -9.352 1.00 3.00 O ATOM 445 N ASP 112 14.863 8.362 -10.084 1.00 3.00 N ATOM 446 CA ASP 112 14.418 8.876 -8.796 1.00 3.00 C ATOM 447 C ASP 112 14.237 7.747 -7.769 1.00 3.00 C ATOM 448 O ASP 112 14.762 7.807 -6.664 1.00 3.00 O ATOM 449 N LEU 113 13.492 6.717 -8.142 1.00 3.00 N ATOM 450 CA LEU 113 13.308 5.561 -7.280 1.00 3.00 C ATOM 451 C LEU 113 14.630 5.044 -6.707 1.00 3.00 C ATOM 452 O LEU 113 14.739 4.836 -5.503 1.00 3.00 O ATOM 453 N ALA 114 15.632 4.835 -7.561 1.00 3.00 N ATOM 454 CA ALA 114 16.955 4.417 -7.089 1.00 3.00 C ATOM 455 C ALA 114 17.513 5.408 -6.070 1.00 3.00 C ATOM 456 O ALA 114 17.929 5.012 -4.987 1.00 3.00 O ATOM 457 N GLN 115 17.517 6.691 -6.425 1.00 3.00 N ATOM 458 CA GLN 115 18.080 7.742 -5.565 1.00 3.00 C ATOM 459 C GLN 115 17.378 7.815 -4.213 1.00 3.00 C ATOM 460 O GLN 115 18.004 8.104 -3.196 1.00 3.00 O ATOM 461 N LYS 116 16.071 7.571 -4.218 1.00 3.00 N ATOM 462 CA LYS 116 15.266 7.567 -3.004 1.00 3.00 C ATOM 463 C LYS 116 15.739 6.482 -2.049 1.00 3.00 C ATOM 464 O LYS 116 15.721 6.649 -0.830 1.00 3.00 O ATOM 465 N ALA 117 16.173 5.369 -2.619 1.00 3.00 N ATOM 466 CA ALA 117 16.549 4.214 -1.837 1.00 3.00 C ATOM 467 C ALA 117 17.962 4.320 -1.292 1.00 3.00 C ATOM 468 O ALA 117 18.262 3.798 -0.224 1.00 3.00 O ATOM 469 N LEU 118 18.826 4.999 -2.027 1.00 3.00 N ATOM 470 CA LEU 118 20.258 4.930 -1.760 1.00 3.00 C ATOM 471 C LEU 118 20.640 5.336 -0.321 1.00 3.00 C ATOM 472 O LEU 118 21.456 4.675 0.333 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 472 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 78.84 45.3 234 95.9 244 ARMSMC SECONDARY STRUCTURE . . 64.63 64.8 108 100.0 108 ARMSMC SURFACE . . . . . . . . 83.15 41.1 141 95.3 148 ARMSMC BURIED . . . . . . . . 71.81 51.6 93 96.9 96 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 100 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 92 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 48 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 63 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 37 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 81 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 70 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 36 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 54 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 34 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 30 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 16 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 18 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 10 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 13.62 (Number of atoms: 118) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 13.62 118 95.9 123 CRMSCA CRN = ALL/NP . . . . . 0.1154 CRMSCA SECONDARY STRUCTURE . . 13.39 54 100.0 54 CRMSCA SURFACE . . . . . . . . 14.48 71 94.7 75 CRMSCA BURIED . . . . . . . . 12.21 47 97.9 48 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 13.58 472 78.1 604 CRMSMC SECONDARY STRUCTURE . . 13.48 216 80.0 270 CRMSMC SURFACE . . . . . . . . 14.44 284 77.6 366 CRMSMC BURIED . . . . . . . . 12.15 188 79.0 238 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 1399 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 1349 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 687 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 834 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 565 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 13.58 472 25.0 1891 CRMSALL SECONDARY STRUCTURE . . 13.48 216 23.9 903 CRMSALL SURFACE . . . . . . . . 14.44 284 25.0 1134 CRMSALL BURIED . . . . . . . . 12.15 188 24.8 757 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.098 0.537 0.269 118 95.9 123 ERRCA SECONDARY STRUCTURE . . 9.592 0.584 0.292 54 100.0 54 ERRCA SURFACE . . . . . . . . 9.597 0.536 0.268 71 94.7 75 ERRCA BURIED . . . . . . . . 8.344 0.539 0.269 47 97.9 48 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.084 0.539 0.270 472 78.1 604 ERRMC SECONDARY STRUCTURE . . 9.663 0.585 0.293 216 80.0 270 ERRMC SURFACE . . . . . . . . 9.578 0.537 0.269 284 77.6 366 ERRMC BURIED . . . . . . . . 8.339 0.541 0.271 188 79.0 238 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 1399 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 1349 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 687 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 834 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 565 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.084 0.539 0.270 472 25.0 1891 ERRALL SECONDARY STRUCTURE . . 9.663 0.585 0.293 216 23.9 903 ERRALL SURFACE . . . . . . . . 9.578 0.537 0.269 284 25.0 1134 ERRALL BURIED . . . . . . . . 8.339 0.541 0.271 188 24.8 757 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 3 41 118 123 DISTCA CA (P) 0.00 0.00 0.00 2.44 33.33 123 DISTCA CA (RMS) 0.00 0.00 0.00 4.49 7.93 DISTCA ALL (N) 0 0 0 6 157 472 1891 DISTALL ALL (P) 0.00 0.00 0.00 0.32 8.30 1891 DISTALL ALL (RMS) 0.00 0.00 0.00 4.57 7.88 DISTALL END of the results output