####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # ERROR! Check molecule: 1 and the amino acid number 94 and name ASP # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 94 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 94 (molecule: 1) # Only one atom (first) is used for calculations. # Molecule1: number of CA atoms 123 ( 493), selected 123 , name T0562AL396_1-D1 # Molecule2: number of CA atoms 123 ( 1891), selected 123 , name T0562-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0562AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 80 - 101 4.83 24.27 LCS_AVERAGE: 16.23 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 110 - 121 1.93 23.17 LCS_AVERAGE: 5.94 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 111 - 120 0.98 23.42 LCS_AVERAGE: 4.08 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 123 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 3 16 2 3 4 4 6 7 12 13 15 17 20 21 25 29 32 36 40 43 46 48 LCS_GDT K 2 K 2 3 5 16 3 3 3 3 5 7 7 11 12 15 17 21 24 28 32 36 39 43 46 48 LCS_GDT D 3 D 3 3 6 16 3 3 3 5 5 7 8 11 12 13 17 22 24 28 32 36 39 43 46 48 LCS_GDT G 4 G 4 4 9 16 3 3 5 7 8 10 10 12 14 15 18 22 25 28 32 35 39 41 45 48 LCS_GDT T 5 T 5 6 9 16 3 6 6 7 8 10 10 12 14 15 18 23 25 28 32 36 39 42 46 48 LCS_GDT Y 6 Y 6 6 9 16 4 6 6 7 8 10 10 11 12 12 18 23 25 27 32 36 39 42 46 48 LCS_GDT Y 7 Y 7 6 9 16 4 6 6 7 8 10 10 11 12 12 18 23 25 28 32 36 39 43 46 48 LCS_GDT A 8 A 8 6 9 16 4 6 7 7 8 10 10 11 12 12 18 23 25 27 32 36 40 43 46 48 LCS_GDT E 9 E 9 6 9 21 4 6 6 7 8 10 10 11 14 15 18 23 25 28 32 36 40 43 46 48 LCS_GDT A 10 A 10 6 9 21 3 6 6 6 8 10 10 11 14 15 18 23 25 28 32 36 40 43 46 48 LCS_GDT D 11 D 11 4 9 21 3 3 6 7 8 10 10 11 13 15 18 23 25 28 32 36 40 43 46 48 LCS_GDT D 12 D 12 4 9 21 3 3 5 7 8 10 10 11 12 12 18 23 25 28 32 33 37 41 44 48 LCS_GDT F 13 F 13 4 6 21 3 3 4 6 6 7 9 11 12 14 18 23 25 28 32 36 40 43 46 48 LCS_GDT D 14 D 14 4 6 21 3 4 5 6 7 7 11 13 15 17 20 23 25 28 32 36 40 43 46 48 LCS_GDT E 15 E 15 4 6 21 0 3 4 6 6 12 12 14 15 17 20 22 26 29 32 36 40 43 46 48 LCS_GDT S 16 S 16 4 6 21 3 3 6 8 9 10 11 12 15 18 23 23 26 28 31 36 40 43 46 48 LCS_GDT G 17 G 17 4 5 21 3 3 4 5 7 10 12 13 15 18 23 23 26 28 32 36 40 43 46 48 LCS_GDT W 18 W 18 4 5 21 3 3 4 5 7 10 12 13 15 18 23 23 26 29 32 36 40 43 46 48 LCS_GDT K 19 K 19 3 5 21 3 3 3 6 7 9 12 12 15 17 23 23 26 29 32 36 40 43 46 48 LCS_GDT D 20 D 20 3 9 21 3 3 5 6 7 10 12 12 14 17 23 23 26 29 32 36 40 43 46 48 LCS_GDT T 21 T 21 7 9 21 5 7 7 8 9 12 12 14 15 17 20 23 25 29 32 36 40 43 46 48 LCS_GDT V 22 V 22 7 9 21 5 7 7 8 10 12 12 14 15 17 20 22 25 29 32 36 40 43 46 48 LCS_GDT T 23 T 23 7 9 21 5 7 7 8 10 12 12 14 15 17 20 23 25 29 32 36 40 43 46 48 LCS_GDT I 24 I 24 7 9 21 5 7 7 8 10 12 12 14 15 17 20 23 25 29 32 36 40 43 46 48 LCS_GDT E 25 E 25 7 9 21 5 7 7 8 10 12 12 14 15 17 20 23 25 29 32 36 40 43 46 48 LCS_GDT V 26 V 26 7 9 21 5 7 7 8 10 12 12 14 15 17 20 23 25 29 32 36 40 43 46 48 LCS_GDT K 27 K 27 7 9 21 5 7 7 8 10 12 12 14 15 17 20 23 25 29 32 36 40 43 46 48 LCS_GDT N 28 N 28 3 9 21 3 3 6 8 10 12 12 14 15 17 20 21 25 29 32 36 40 43 46 48 LCS_GDT G 29 G 29 3 5 21 3 3 3 3 5 8 11 14 15 17 20 23 25 29 32 36 40 43 46 48 LCS_GDT K 30 K 30 6 7 18 4 4 6 7 8 8 9 10 11 12 16 17 21 21 23 23 26 30 34 35 LCS_GDT I 31 I 31 6 7 18 4 4 6 7 8 8 9 10 11 12 16 17 21 22 23 25 29 36 38 44 LCS_GDT V 32 V 32 6 7 18 4 4 6 7 8 8 9 10 11 12 16 17 21 22 23 23 26 34 37 42 LCS_GDT S 33 S 33 6 7 20 4 4 6 7 8 8 9 12 14 16 18 21 25 29 32 36 40 43 46 48 LCS_GDT V 34 V 34 6 8 20 3 4 6 7 8 8 11 14 16 17 19 23 25 29 32 36 40 43 46 48 LCS_GDT D 35 D 35 6 8 20 3 4 7 7 10 11 11 14 16 17 19 23 25 28 32 36 40 43 46 48 LCS_GDT W 36 W 36 6 8 20 3 4 7 7 10 11 11 14 16 17 19 23 25 28 32 34 37 41 45 48 LCS_GDT N 37 N 37 6 8 20 3 4 7 7 10 11 11 14 16 17 19 23 25 29 32 36 40 43 46 48 LCS_GDT A 38 A 38 6 8 20 3 4 7 7 10 11 11 14 16 17 19 23 25 28 32 36 40 43 46 48 LCS_GDT I 39 I 39 6 8 20 3 4 7 7 10 11 11 14 16 17 21 22 25 29 32 36 40 43 46 48 LCS_GDT N 40 N 40 6 8 20 3 4 7 7 10 11 11 14 16 17 19 23 25 28 32 36 40 43 46 48 LCS_GDT K 41 K 41 4 8 20 4 4 7 7 10 11 11 14 16 17 20 22 25 29 32 36 40 43 46 48 LCS_GDT D 42 D 42 4 4 20 4 4 4 6 7 8 10 13 16 17 20 21 24 29 32 36 40 43 46 48 LCS_GDT G 43 G 43 4 5 20 4 4 4 6 8 10 11 14 16 17 20 21 25 29 32 36 40 43 46 48 LCS_GDT G 44 G 44 4 8 20 4 4 6 8 10 12 12 14 16 17 20 21 25 29 32 36 40 43 46 48 LCS_GDT D 45 D 45 7 8 20 5 5 7 8 10 12 12 14 16 17 20 21 25 29 32 36 40 43 46 48 LCS_GDT D 46 D 46 7 8 20 5 6 7 7 8 8 10 13 14 17 20 22 26 29 31 34 40 42 46 48 LCS_GDT K 47 K 47 7 8 20 5 6 7 7 8 8 10 13 16 18 21 22 25 29 31 36 40 43 46 48 LCS_GDT D 48 D 48 7 8 20 5 6 7 7 8 8 10 13 16 18 23 23 26 29 31 36 40 43 46 48 LCS_GDT T 49 T 49 7 8 20 5 6 7 8 10 12 12 14 16 17 21 22 25 29 32 36 40 43 46 48 LCS_GDT L 50 L 50 7 8 20 4 6 7 7 8 8 10 13 16 18 21 22 25 29 32 36 40 43 46 48 LCS_GDT S 51 S 51 7 8 20 4 6 7 7 8 8 10 14 15 18 21 22 26 29 32 36 40 43 46 48 LCS_GDT R 52 R 52 3 8 20 3 3 3 4 7 8 10 13 16 18 21 22 25 28 32 34 37 43 46 48 LCS_GDT N 53 N 53 3 5 20 3 3 3 5 7 8 10 12 16 18 21 22 25 28 32 34 37 41 45 48 LCS_GDT G 54 G 54 3 7 20 3 3 4 7 7 10 10 12 16 18 21 22 25 28 32 34 37 41 45 48 LCS_GDT G 55 G 55 5 7 20 3 5 7 7 7 9 10 12 14 17 21 22 24 28 32 34 37 41 45 48 LCS_GDT Y 56 Y 56 5 7 20 3 4 7 7 7 9 10 12 16 18 21 22 25 28 32 34 37 41 45 48 LCS_GDT K 57 K 57 5 7 20 3 5 7 7 7 9 11 11 16 18 21 22 25 28 32 34 37 41 45 48 LCS_GDT M 58 M 58 5 7 20 3 5 7 7 7 9 11 13 16 18 21 22 25 28 32 34 37 41 45 48 LCS_GDT V 59 V 59 5 8 20 3 5 7 7 7 9 11 11 16 18 21 22 25 27 29 30 32 38 41 44 LCS_GDT E 60 E 60 4 8 20 3 5 7 7 7 9 11 11 16 18 20 22 25 27 29 31 36 38 41 46 LCS_GDT Y 61 Y 61 4 8 20 3 3 4 7 7 8 11 11 14 15 17 19 24 27 29 30 32 38 40 44 LCS_GDT G 62 G 62 4 8 20 3 3 4 7 7 9 11 11 14 15 16 19 24 26 29 34 36 40 43 46 LCS_GDT G 63 G 63 4 8 20 3 3 4 5 7 8 11 12 16 18 20 22 25 28 32 34 37 41 45 48 LCS_GDT A 64 A 64 4 8 20 3 3 5 7 7 8 11 11 16 18 21 22 25 28 32 34 37 41 45 48 LCS_GDT Q 65 Q 65 4 8 20 3 4 5 7 7 8 11 11 16 18 21 22 25 27 32 34 37 41 45 48 LCS_GDT A 66 A 66 4 8 20 3 4 5 7 8 8 11 13 14 17 21 22 24 27 29 33 37 41 45 48 LCS_GDT E 67 E 67 3 5 20 3 3 4 5 7 8 11 13 14 17 19 22 25 27 29 30 32 34 36 40 LCS_GDT W 68 W 68 3 6 20 3 3 3 4 6 6 8 11 14 18 21 22 25 27 29 30 32 33 34 36 LCS_GDT H 69 H 69 5 6 20 4 4 5 5 6 9 10 11 16 18 21 22 25 28 30 33 35 41 45 48 LCS_GDT E 70 E 70 5 6 20 4 4 5 5 6 6 7 9 16 18 20 22 25 28 29 33 35 39 41 42 LCS_GDT Q 71 Q 71 5 6 20 4 4 5 5 6 6 10 11 16 18 21 22 25 28 29 30 33 39 41 42 LCS_GDT A 72 A 72 5 6 20 4 4 5 5 6 6 10 10 14 18 21 22 25 27 28 30 33 39 41 42 LCS_GDT E 73 E 73 5 6 16 4 4 5 5 6 6 9 9 12 13 14 17 21 28 30 31 33 39 41 42 LCS_GDT K 74 K 74 4 6 16 3 3 4 4 6 6 7 9 12 13 14 17 21 28 30 31 33 39 41 42 LCS_GDT V 75 V 75 3 5 16 3 3 3 4 5 6 7 9 12 13 14 17 21 28 29 30 35 39 41 42 LCS_GDT E 76 E 76 3 5 16 3 3 3 4 5 5 6 9 12 13 14 14 16 20 22 24 28 33 38 42 LCS_GDT A 77 A 77 3 5 16 3 3 3 4 5 5 6 8 9 11 13 17 21 28 30 33 35 39 41 43 LCS_GDT Y 78 Y 78 3 5 16 3 3 3 4 5 5 6 8 9 11 13 22 22 24 26 29 32 35 41 43 LCS_GDT L 79 L 79 3 5 16 3 3 3 4 5 5 7 8 9 11 12 16 17 24 29 33 36 38 42 45 LCS_GDT V 80 V 80 3 3 22 0 3 3 4 5 7 10 13 15 18 23 23 26 28 31 34 36 38 42 45 LCS_GDT E 81 E 81 4 5 22 0 4 5 5 7 7 10 13 15 18 23 23 26 28 31 34 36 38 42 45 LCS_GDT K 82 K 82 4 6 22 3 4 5 6 7 7 9 13 15 18 23 23 26 28 31 34 36 38 42 45 LCS_GDT Q 83 Q 83 4 6 22 3 4 5 6 7 7 9 9 10 12 14 20 22 25 29 34 36 38 42 45 LCS_GDT D 84 D 84 4 6 22 4 4 5 6 7 7 9 9 10 16 16 20 21 23 26 27 31 35 42 45 LCS_GDT P 85 P 85 4 6 22 4 4 5 5 6 7 9 9 10 12 14 20 22 25 29 34 36 38 42 45 LCS_GDT T 86 T 86 4 6 22 4 4 4 5 6 7 7 9 13 18 23 23 26 28 31 34 36 38 42 45 LCS_GDT D 87 D 87 4 6 22 4 4 4 5 6 7 7 9 11 18 23 23 26 28 31 34 36 38 42 45 LCS_GDT I 88 I 88 3 6 22 0 3 4 6 7 9 10 10 13 18 23 23 26 28 31 34 36 41 45 48 LCS_GDT K 89 K 89 3 4 22 0 3 3 3 4 6 10 10 15 18 23 23 26 28 31 34 36 41 45 48 LCS_GDT Y 90 Y 90 3 6 22 3 3 4 4 6 7 10 13 14 17 23 23 26 28 31 34 37 41 45 48 LCS_GDT K 91 K 91 4 6 22 3 3 5 5 6 7 11 13 15 18 23 23 26 28 32 34 37 41 45 48 LCS_GDT D 92 D 92 4 7 22 3 3 5 6 7 7 10 13 15 18 23 23 26 28 32 34 37 41 45 48 LCS_GDT N 93 N 93 5 7 22 3 4 5 6 7 8 10 13 14 15 20 22 26 28 32 34 37 41 45 48 LCS_GDT D 94 D 94 5 7 22 3 3 5 6 7 8 10 13 15 18 23 23 26 28 31 34 37 41 45 48 LCS_GDT G 95 G 95 5 7 22 4 4 5 6 9 10 11 13 15 18 23 23 26 28 32 34 37 41 45 48 LCS_GDT H 96 H 96 5 7 22 4 4 5 6 9 10 11 12 15 18 23 23 26 28 32 34 37 41 45 48 LCS_GDT T 97 T 97 5 7 22 4 4 5 6 8 9 10 11 14 16 23 23 26 28 32 34 37 41 45 48 LCS_GDT D 98 D 98 5 7 22 4 4 5 6 8 9 10 10 14 15 20 20 22 27 29 32 35 37 44 48 LCS_GDT A 99 A 99 5 7 22 3 4 5 6 8 9 10 11 14 18 23 23 25 28 31 33 36 38 42 45 LCS_GDT I 100 I 100 5 7 22 3 4 5 6 8 9 10 13 15 18 23 23 26 28 31 34 36 38 42 45 LCS_GDT S 101 S 101 5 7 22 3 3 5 6 8 9 10 13 15 18 23 23 26 28 31 34 36 38 42 45 LCS_GDT G 102 G 102 4 7 17 3 3 4 6 8 8 9 10 12 15 19 23 26 28 31 34 36 38 42 45 LCS_GDT A 103 A 103 4 7 20 3 3 4 6 8 8 9 10 11 13 16 20 24 28 31 34 36 38 42 45 LCS_GDT T 104 T 104 4 7 20 3 3 4 5 7 8 8 10 10 12 14 17 19 25 31 34 36 38 42 45 LCS_GDT I 105 I 105 3 5 20 3 3 3 4 9 11 11 14 16 17 19 20 21 22 25 28 35 38 42 45 LCS_GDT K 106 K 106 3 5 20 3 3 6 7 9 11 11 14 16 17 19 20 21 22 23 26 28 34 35 39 LCS_GDT V 107 V 107 3 5 20 3 3 5 7 9 11 12 13 14 17 19 20 21 22 23 26 27 34 35 39 LCS_GDT K 108 K 108 3 4 20 3 3 4 4 5 7 9 14 16 17 19 20 21 22 23 26 27 28 32 37 LCS_GDT K 109 K 109 3 4 20 3 3 5 7 8 8 9 13 14 17 18 20 21 22 23 26 28 34 36 39 LCS_GDT F 110 F 110 3 12 20 3 3 3 4 4 5 11 11 14 17 18 19 21 22 23 26 28 34 34 38 LCS_GDT F 111 F 111 10 12 20 7 9 9 10 11 11 12 13 14 16 16 18 19 22 23 26 37 41 45 48 LCS_GDT D 112 D 112 10 12 20 4 9 9 10 11 11 12 13 14 16 16 17 19 25 32 34 37 41 45 48 LCS_GDT L 113 L 113 10 12 20 7 9 9 10 11 11 12 13 14 16 16 19 22 28 32 34 37 41 45 48 LCS_GDT A 114 A 114 10 12 20 7 9 9 10 11 11 12 13 14 16 18 20 24 28 32 34 37 41 45 48 LCS_GDT Q 115 Q 115 10 12 20 7 9 9 10 11 11 12 13 14 16 18 20 24 28 32 34 37 41 45 48 LCS_GDT K 116 K 116 10 12 20 7 9 9 10 11 11 12 13 14 16 18 20 24 28 31 34 37 41 45 48 LCS_GDT A 117 A 117 10 12 20 7 9 9 10 11 11 12 13 14 16 18 19 24 27 30 33 37 41 45 48 LCS_GDT L 118 L 118 10 12 20 4 9 9 10 11 11 12 13 14 16 16 18 19 22 26 32 34 38 44 47 LCS_GDT K 119 K 119 10 12 20 7 9 9 10 11 11 12 13 14 16 16 18 19 22 27 30 34 36 41 45 LCS_GDT D 120 D 120 10 12 20 3 3 4 10 11 11 12 13 14 16 16 18 22 25 27 30 34 39 43 47 LCS_GDT A 121 A 121 3 12 20 0 3 4 10 11 11 12 13 14 15 15 18 18 22 23 25 26 28 31 32 LCS_GDT E 122 E 122 3 3 20 1 2 4 5 8 10 10 13 13 14 15 18 18 22 22 23 24 26 27 28 LCS_GDT K 123 K 123 3 3 20 0 2 3 3 4 5 6 6 8 8 9 18 18 22 22 23 24 26 27 28 LCS_AVERAGE LCS_A: 8.75 ( 4.08 5.94 16.23 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 9 10 11 12 12 14 16 18 23 23 26 29 32 36 40 43 46 48 GDT PERCENT_AT 5.69 7.32 7.32 8.13 8.94 9.76 9.76 11.38 13.01 14.63 18.70 18.70 21.14 23.58 26.02 29.27 32.52 34.96 37.40 39.02 GDT RMS_LOCAL 0.30 0.48 0.48 0.79 1.18 1.97 1.97 2.58 3.25 3.94 4.34 4.34 4.91 5.00 5.75 5.91 6.23 6.49 6.71 6.88 GDT RMS_ALL_AT 23.93 23.93 23.93 23.55 22.86 21.91 21.91 21.89 22.25 22.77 22.09 22.09 21.71 21.11 16.44 21.93 21.88 21.96 22.07 22.24 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 4.533 4 0.576 0.576 6.512 27.976 13.988 LGA K 2 K 2 9.189 5 0.646 0.646 10.718 2.976 1.323 LGA D 3 D 3 9.489 4 0.546 0.546 10.933 1.071 0.536 LGA G 4 G 4 12.935 0 0.645 0.645 12.935 0.000 0.000 LGA T 5 T 5 11.600 3 0.115 0.115 12.820 0.000 0.000 LGA Y 6 Y 6 11.809 8 0.045 0.045 11.809 0.119 0.040 LGA Y 7 Y 7 11.208 8 0.045 0.045 13.160 0.000 0.000 LGA A 8 A 8 11.445 1 0.029 0.029 11.445 0.119 0.095 LGA E 9 E 9 10.618 5 0.132 0.132 11.226 0.000 0.000 LGA A 10 A 10 10.271 1 0.095 0.095 10.869 0.000 0.000 LGA D 11 D 11 11.015 4 0.601 0.601 14.591 0.000 0.000 LGA D 12 D 12 12.419 4 0.238 0.238 12.419 1.190 0.595 LGA F 13 F 13 8.260 7 0.130 0.130 10.215 2.381 0.866 LGA D 14 D 14 5.570 4 0.521 0.521 5.861 27.857 13.929 LGA E 15 E 15 2.826 5 0.408 0.408 6.144 42.143 18.730 LGA S 16 S 16 7.320 2 0.676 0.676 8.432 13.333 8.889 LGA G 17 G 17 8.000 0 0.535 0.535 8.258 5.952 5.952 LGA W 18 W 18 7.329 10 0.608 0.608 7.329 15.714 4.490 LGA K 19 K 19 5.315 5 0.141 0.141 5.315 26.190 11.640 LGA D 20 D 20 6.299 4 0.052 0.052 6.793 18.333 9.167 LGA T 21 T 21 2.539 3 0.016 0.016 2.539 64.881 37.075 LGA V 22 V 22 2.291 3 0.229 0.229 3.360 63.095 36.054 LGA T 23 T 23 1.276 3 0.159 0.159 3.432 71.429 40.816 LGA I 24 I 24 1.358 4 0.121 0.121 2.009 81.786 40.893 LGA E 25 E 25 1.959 5 0.155 0.155 3.293 65.119 28.942 LGA V 26 V 26 1.237 3 0.042 0.042 1.366 81.429 46.531 LGA K 27 K 27 2.433 5 0.021 0.021 3.246 63.095 28.042 LGA N 28 N 28 2.570 4 0.118 0.118 5.064 55.476 27.738 LGA G 29 G 29 4.895 0 0.214 0.214 8.322 26.667 26.667 LGA K 30 K 30 17.313 5 0.316 0.316 17.313 0.000 0.000 LGA I 31 I 31 12.511 4 0.173 0.173 15.239 0.000 0.000 LGA V 32 V 32 13.558 3 0.031 0.031 13.558 0.000 0.000 LGA S 33 S 33 9.498 2 0.442 0.442 10.362 1.429 0.952 LGA V 34 V 34 8.568 3 0.048 0.048 10.715 1.786 1.020 LGA D 35 D 35 10.145 4 0.653 0.653 12.844 0.714 0.357 LGA W 36 W 36 12.654 10 0.106 0.106 12.654 0.119 0.034 LGA N 37 N 37 8.777 4 0.109 0.109 11.724 0.833 0.417 LGA A 38 A 38 9.857 1 0.064 0.064 9.857 4.524 3.619 LGA I 39 I 39 6.925 4 0.102 0.102 10.242 5.238 2.619 LGA N 40 N 40 10.511 4 0.642 0.642 10.511 1.429 0.714 LGA K 41 K 41 7.825 5 0.578 0.578 8.772 8.571 3.810 LGA D 42 D 42 9.932 4 0.033 0.033 9.932 4.524 2.262 LGA G 43 G 43 5.788 0 0.132 0.132 7.105 36.548 36.548 LGA G 44 G 44 1.680 0 0.083 0.083 3.388 67.262 67.262 LGA D 45 D 45 2.293 4 0.151 0.151 5.553 51.190 25.595 LGA D 46 D 46 7.007 4 0.080 0.080 7.007 21.548 10.774 LGA K 47 K 47 8.520 5 0.088 0.088 8.543 12.262 5.450 LGA D 48 D 48 5.693 4 0.119 0.119 6.508 35.476 17.738 LGA T 49 T 49 2.065 3 0.175 0.175 4.760 54.524 31.156 LGA L 50 L 50 5.655 4 0.180 0.180 7.762 26.786 13.393 LGA S 51 S 51 4.013 2 0.607 0.607 6.466 30.714 20.476 LGA R 52 R 52 6.529 7 0.169 0.169 10.246 10.595 3.853 LGA N 53 N 53 13.150 4 0.584 0.584 14.645 0.000 0.000 LGA G 54 G 54 17.204 0 0.277 0.277 20.881 0.000 0.000 LGA G 55 G 55 22.264 0 0.221 0.221 23.088 0.000 0.000 LGA Y 56 Y 56 21.008 8 0.336 0.336 23.400 0.000 0.000 LGA K 57 K 57 22.437 5 0.040 0.040 22.437 0.000 0.000 LGA M 58 M 58 21.581 4 0.072 0.072 24.498 0.000 0.000 LGA V 59 V 59 23.745 3 0.662 0.662 23.885 0.000 0.000 LGA E 60 E 60 24.656 5 0.114 0.114 26.408 0.000 0.000 LGA Y 61 Y 61 26.954 8 0.597 0.597 28.020 0.000 0.000 LGA G 62 G 62 30.789 0 0.422 0.422 33.744 0.000 0.000 LGA G 63 G 63 33.045 0 0.658 0.658 35.217 0.000 0.000 LGA A 64 A 64 33.356 1 0.059 0.059 33.356 0.000 0.000 LGA Q 65 Q 65 33.202 5 0.315 0.315 33.493 0.000 0.000 LGA A 66 A 66 30.367 1 0.411 0.411 31.497 0.000 0.000 LGA E 67 E 67 29.070 5 0.618 0.618 30.029 0.000 0.000 LGA W 68 W 68 27.306 10 0.578 0.578 27.689 0.000 0.000 LGA H 69 H 69 24.723 6 0.513 0.513 26.064 0.000 0.000 LGA E 70 E 70 27.063 5 0.195 0.195 28.295 0.000 0.000 LGA Q 71 Q 71 30.893 5 0.154 0.154 30.893 0.000 0.000 LGA A 72 A 72 26.509 1 0.083 0.083 27.809 0.000 0.000 LGA E 73 E 73 24.566 5 0.040 0.040 26.185 0.000 0.000 LGA K 74 K 74 29.905 5 0.304 0.304 30.300 0.000 0.000 LGA V 75 V 75 28.244 3 0.595 0.595 29.986 0.000 0.000 LGA E 76 E 76 28.073 5 0.683 0.683 28.073 0.000 0.000 LGA A 77 A 77 28.634 1 0.658 0.658 31.104 0.000 0.000 LGA Y 78 Y 78 31.431 8 0.640 0.640 31.431 0.000 0.000 LGA L 79 L 79 28.836 4 0.626 0.626 30.441 0.000 0.000 LGA V 80 V 80 28.500 3 0.623 0.623 30.060 0.000 0.000 LGA E 81 E 81 33.949 5 0.641 0.641 35.597 0.000 0.000 LGA K 82 K 82 33.963 5 0.660 0.660 33.963 0.000 0.000 LGA Q 83 Q 83 32.811 5 0.352 0.352 33.315 0.000 0.000 LGA D 84 D 84 28.722 4 0.588 0.588 30.032 0.000 0.000 LGA P 85 P 85 26.823 3 0.222 0.222 27.846 0.000 0.000 LGA T 86 T 86 30.846 3 0.119 0.119 32.581 0.000 0.000 LGA D 87 D 87 33.088 4 0.590 0.590 33.258 0.000 0.000 LGA I 88 I 88 31.866 4 0.627 0.627 33.202 0.000 0.000 LGA K 89 K 89 36.303 5 0.619 0.619 38.407 0.000 0.000 LGA Y 90 Y 90 38.611 8 0.612 0.612 39.352 0.000 0.000 LGA K 91 K 91 39.385 5 0.563 0.563 39.799 0.000 0.000 LGA D 92 D 92 35.360 4 0.700 0.700 36.359 0.000 0.000 LGA N 93 N 93 33.839 4 0.116 0.116 34.874 0.000 0.000 LGA D 94 D 94 28.340 4 0.543 0.543 30.670 0.000 0.000 LGA G 95 G 95 28.822 0 0.150 0.150 28.822 0.000 0.000 LGA H 96 H 96 28.729 6 0.070 0.070 30.648 0.000 0.000 LGA T 97 T 97 30.881 3 0.632 0.632 31.648 0.000 0.000 LGA D 98 D 98 31.501 4 0.193 0.193 32.780 0.000 0.000 LGA A 99 A 99 32.314 1 0.113 0.113 33.234 0.000 0.000 LGA I 100 I 100 33.924 4 0.161 0.161 35.300 0.000 0.000 LGA S 101 S 101 32.673 2 0.587 0.587 33.592 0.000 0.000 LGA G 102 G 102 35.839 0 0.099 0.099 35.839 0.000 0.000 LGA A 103 A 103 33.335 1 0.582 0.582 34.135 0.000 0.000 LGA T 104 T 104 32.507 3 0.248 0.248 33.412 0.000 0.000 LGA I 105 I 105 31.702 4 0.603 0.603 32.451 0.000 0.000 LGA K 106 K 106 33.340 5 0.561 0.561 33.340 0.000 0.000 LGA V 107 V 107 30.033 3 0.068 0.068 31.004 0.000 0.000 LGA K 108 K 108 27.979 5 0.128 0.128 28.630 0.000 0.000 LGA K 109 K 109 26.480 5 0.287 0.287 27.125 0.000 0.000 LGA F 110 F 110 20.924 7 0.130 0.130 23.001 0.000 0.000 LGA F 111 F 111 23.256 7 0.073 0.073 24.317 0.000 0.000 LGA D 112 D 112 23.012 4 0.102 0.102 23.598 0.000 0.000 LGA L 113 L 113 18.219 4 0.075 0.075 20.151 0.000 0.000 LGA A 114 A 114 14.750 1 0.047 0.047 16.217 0.000 0.000 LGA Q 115 Q 115 15.442 5 0.059 0.059 15.695 0.000 0.000 LGA K 116 K 116 14.056 5 0.131 0.131 14.539 0.000 0.000 LGA A 117 A 117 11.442 1 0.069 0.069 12.235 0.000 0.000 LGA L 118 L 118 11.479 4 0.354 0.354 11.479 0.000 0.000 LGA K 119 K 119 10.665 5 0.078 0.078 10.909 0.238 0.106 LGA D 120 D 120 10.129 4 0.050 0.050 12.344 0.119 0.060 LGA A 121 A 121 16.628 1 0.541 0.541 19.103 0.000 0.000 LGA E 122 E 122 22.717 5 0.611 0.611 23.378 0.000 0.000 LGA K 123 K 123 24.373 5 0.037 0.037 24.694 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 123 492 492 100.00 969 492 50.77 123 SUMMARY(RMSD_GDC): 15.849 15.912 15.912 9.226 5.294 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 123 123 4.0 14 2.58 14.024 11.438 0.522 LGA_LOCAL RMSD: 2.584 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.891 Number of assigned atoms: 123 Std_ASGN_ATOMS RMSD: 15.849 Standard rmsd on all 123 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.871034 * X + 0.481193 * Y + 0.098756 * Z + -28.320967 Y_new = -0.351356 * X + 0.469805 * Y + 0.809834 * Z + -63.595634 Z_new = 0.343290 * X + -0.740092 * Y + 0.578287 * Z + -21.986279 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.383415 -0.350418 -0.907518 [DEG: -21.9681 -20.0775 -51.9970 ] ZXZ: 3.020245 0.954169 2.707283 [DEG: 173.0473 54.6699 155.1159 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0562AL396_1-D1 REMARK 2: T0562-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0562AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 123 123 4.0 14 2.58 11.438 15.85 REMARK ---------------------------------------------------------- MOLECULE T0562AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 2raa_A ATOM 1 N MET 1 2.869 -7.003 15.263 1.00 0.00 N ATOM 2 CA MET 1 3.116 -5.901 16.223 1.00 0.00 C ATOM 3 C MET 1 2.997 -6.404 17.664 1.00 0.00 C ATOM 4 O MET 1 3.867 -6.147 18.505 1.00 0.00 O ATOM 5 N LYS 2 1.929 -7.149 17.923 1.00 0.00 N ATOM 6 CA LYS 2 1.705 -7.739 19.248 1.00 0.00 C ATOM 7 C LYS 2 2.755 -8.796 19.589 1.00 0.00 C ATOM 8 O LYS 2 3.051 -9.022 20.742 1.00 0.00 O ATOM 9 N ASP 3 3.373 -9.380 18.580 1.00 0.00 N ATOM 10 CA ASP 3 4.492 -10.289 18.784 1.00 0.00 C ATOM 11 C ASP 3 5.822 -9.597 19.031 1.00 0.00 C ATOM 12 O ASP 3 6.833 -10.273 19.282 1.00 0.00 O ATOM 13 N GLY 4 5.859 -8.259 18.937 1.00 0.00 N ATOM 14 CA GLY 4 7.084 -7.508 19.217 1.00 0.00 C ATOM 15 C GLY 4 7.938 -7.350 17.975 1.00 0.00 C ATOM 16 O GLY 4 9.134 -7.091 18.059 1.00 0.00 O ATOM 17 N THR 5 7.331 -7.492 16.808 1.00 0.00 N ATOM 18 CA THR 5 8.075 -7.347 15.548 1.00 0.00 C ATOM 19 C THR 5 7.953 -5.913 15.001 1.00 0.00 C ATOM 20 O THR 5 6.952 -5.229 15.219 1.00 0.00 O ATOM 21 N TYR 6 8.965 -5.480 14.274 1.00 0.00 N ATOM 22 CA TYR 6 8.902 -4.229 13.507 1.00 0.00 C ATOM 23 C TYR 6 8.025 -4.424 12.305 1.00 0.00 C ATOM 24 O TYR 6 8.241 -5.364 11.555 1.00 0.00 O ATOM 25 N TYR 7 7.049 -3.549 12.080 1.00 0.00 N ATOM 26 CA TYR 7 6.126 -3.755 10.960 1.00 0.00 C ATOM 27 C TYR 7 5.747 -2.489 10.228 1.00 0.00 C ATOM 28 O TYR 7 5.778 -1.397 10.767 1.00 0.00 O ATOM 29 N ALA 8 5.406 -2.665 8.974 1.00 0.00 N ATOM 30 CA ALA 8 4.843 -1.605 8.177 1.00 0.00 C ATOM 31 C ALA 8 3.799 -2.236 7.288 1.00 0.00 C ATOM 32 O ALA 8 3.937 -3.407 6.886 1.00 0.00 O ATOM 33 N GLU 9 2.777 -1.453 6.964 1.00 0.00 N ATOM 34 CA GLU 9 1.663 -1.889 6.143 1.00 0.00 C ATOM 35 C GLU 9 0.883 -0.707 5.633 1.00 0.00 C ATOM 36 O GLU 9 0.419 0.110 6.426 1.00 0.00 O ATOM 37 N ALA 10 0.688 -0.608 4.329 1.00 0.00 N ATOM 38 CA ALA 10 -0.136 0.462 3.796 1.00 0.00 C ATOM 39 C ALA 10 -0.732 -0.012 2.493 1.00 0.00 C ATOM 40 O ALA 10 -0.274 -1.006 1.951 1.00 0.00 O ATOM 41 N ASP 11 -1.752 0.695 1.988 1.00 0.00 N ATOM 42 CA ASP 11 -2.283 0.417 0.672 1.00 0.00 C ATOM 43 C ASP 11 -1.769 1.392 -0.378 1.00 0.00 C ATOM 44 O ASP 11 -1.091 2.349 -0.044 1.00 0.00 O ATOM 45 N ASP 12 -2.070 1.095 -1.642 1.00 0.00 N ATOM 46 CA ASP 12 -1.852 2.000 -2.782 1.00 0.00 C ATOM 47 C ASP 12 -3.029 1.855 -3.757 1.00 0.00 C ATOM 48 O ASP 12 -3.164 0.830 -4.427 1.00 0.00 O ATOM 49 N PHE 13 -3.884 2.880 -3.809 1.00 0.00 N ATOM 50 CA PHE 13 -5.040 2.902 -4.720 1.00 0.00 C ATOM 51 C PHE 13 -4.793 3.787 -5.954 1.00 0.00 C ATOM 52 O PHE 13 -3.744 4.431 -6.090 1.00 0.00 O ATOM 53 N ASP 14 -5.779 3.778 -6.851 1.00 0.00 N ATOM 54 CA ASP 14 -5.873 4.688 -8.009 1.00 0.00 C ATOM 55 C ASP 14 -7.309 4.559 -8.496 1.00 0.00 C ATOM 56 O ASP 14 -7.561 4.211 -9.651 1.00 0.00 O ATOM 57 N GLU 15 -8.250 4.822 -7.587 1.00 0.00 N ATOM 58 CA GLU 15 -9.674 4.565 -7.811 1.00 0.00 C ATOM 59 C GLU 15 -10.526 5.807 -7.576 1.00 0.00 C ATOM 60 O GLU 15 -11.549 5.746 -6.894 1.00 0.00 O ATOM 61 N SER 16 -13.031 3.838 -8.752 1.00 0.00 N ATOM 62 CA SER 16 -14.290 3.146 -8.508 1.00 0.00 C ATOM 63 C SER 16 -14.149 2.057 -7.438 1.00 0.00 C ATOM 64 O SER 16 -13.050 1.774 -6.938 1.00 0.00 O ATOM 65 N GLY 17 -15.292 1.483 -7.067 1.00 0.00 N ATOM 66 CA GLY 17 -15.340 0.286 -6.224 1.00 0.00 C ATOM 67 C GLY 17 -15.144 -0.873 -7.205 1.00 0.00 C ATOM 68 O GLY 17 -15.829 -0.947 -8.245 1.00 0.00 O ATOM 69 N TRP 18 -14.191 -1.750 -6.890 1.00 0.00 N ATOM 70 CA TRP 18 -13.776 -2.823 -7.803 1.00 0.00 C ATOM 71 C TRP 18 -12.515 -2.467 -8.589 1.00 0.00 C ATOM 72 O TRP 18 -12.013 -3.274 -9.369 1.00 0.00 O ATOM 73 N LYS 19 -12.006 -1.253 -8.395 1.00 0.00 N ATOM 74 CA LYS 19 -10.754 -0.840 -9.012 1.00 0.00 C ATOM 75 C LYS 19 -9.588 -1.658 -8.410 1.00 0.00 C ATOM 76 O LYS 19 -9.522 -1.855 -7.180 1.00 0.00 O ATOM 77 N ASP 20 -8.686 -2.170 -9.274 1.00 0.00 N ATOM 78 CA ASP 20 -7.517 -2.913 -8.793 1.00 0.00 C ATOM 79 C ASP 20 -6.655 -2.066 -7.886 1.00 0.00 C ATOM 80 O ASP 20 -6.460 -0.876 -8.155 1.00 0.00 O ATOM 81 N THR 21 -3.299 -2.443 -4.507 1.00 0.00 N ATOM 82 CA THR 21 -2.277 -3.239 -3.849 1.00 0.00 C ATOM 83 C THR 21 -2.271 -2.861 -2.343 1.00 0.00 C ATOM 84 O THR 21 -2.748 -1.788 -1.944 1.00 0.00 O ATOM 85 N VAL 22 -1.791 -3.769 -1.515 1.00 0.00 N ATOM 86 CA VAL 22 -1.482 -3.485 -0.120 1.00 0.00 C ATOM 87 C VAL 22 -0.082 -4.109 0.060 1.00 0.00 C ATOM 88 O VAL 22 0.347 -4.848 -0.803 1.00 0.00 O ATOM 89 N THR 23 0.626 -3.815 1.148 1.00 0.00 N ATOM 90 CA THR 23 1.980 -4.266 1.345 1.00 0.00 C ATOM 91 C THR 23 2.218 -4.521 2.798 1.00 0.00 C ATOM 92 O THR 23 1.687 -3.821 3.594 1.00 0.00 O ATOM 93 N ILE 24 3.020 -5.524 3.142 1.00 0.00 N ATOM 94 CA ILE 24 3.496 -5.718 4.504 1.00 0.00 C ATOM 95 C ILE 24 4.995 -5.878 4.450 1.00 0.00 C ATOM 96 O ILE 24 5.513 -6.533 3.531 1.00 0.00 O ATOM 97 N GLU 25 5.660 -5.256 5.426 1.00 0.00 N ATOM 98 CA GLU 25 7.046 -5.522 5.745 1.00 0.00 C ATOM 99 C GLU 25 7.016 -5.896 7.192 1.00 0.00 C ATOM 100 O GLU 25 6.352 -5.225 7.996 1.00 0.00 O ATOM 101 N VAL 26 7.614 -7.041 7.496 1.00 0.00 N ATOM 102 CA VAL 26 7.640 -7.561 8.862 1.00 0.00 C ATOM 103 C VAL 26 9.112 -7.912 9.148 1.00 0.00 C ATOM 104 O VAL 26 9.686 -8.669 8.416 1.00 0.00 O ATOM 105 N LYS 27 9.713 -7.303 10.163 1.00 0.00 N ATOM 106 CA LYS 27 11.160 -7.449 10.421 1.00 0.00 C ATOM 107 C LYS 27 11.401 -8.855 10.852 1.00 0.00 C ATOM 108 O LYS 27 10.569 -9.444 11.564 1.00 0.00 O ATOM 109 N ASN 28 12.495 -9.423 10.391 1.00 0.00 N ATOM 110 CA ASN 28 12.812 -10.802 10.738 1.00 0.00 C ATOM 111 C ASN 28 14.233 -10.910 11.289 1.00 0.00 C ATOM 112 O ASN 28 15.038 -11.724 10.831 1.00 0.00 O ATOM 113 N GLY 29 14.450 -10.102 12.339 1.00 0.00 N ATOM 114 CA GLY 29 15.707 -9.893 13.065 1.00 0.00 C ATOM 115 C GLY 29 16.734 -9.274 12.133 1.00 0.00 C ATOM 116 O GLY 29 17.182 -8.147 12.347 1.00 0.00 O ATOM 117 N LYS 30 6.425 1.227 -1.219 1.00 0.00 N ATOM 118 CA LYS 30 6.296 0.584 -2.540 1.00 0.00 C ATOM 119 C LYS 30 7.218 -0.664 -2.671 1.00 0.00 C ATOM 120 O LYS 30 8.428 -0.550 -2.934 1.00 0.00 O ATOM 121 N ILE 31 6.619 -1.842 -2.461 1.00 0.00 N ATOM 122 CA ILE 31 7.302 -3.151 -2.494 1.00 0.00 C ATOM 123 C ILE 31 7.610 -3.625 -3.915 1.00 0.00 C ATOM 124 O ILE 31 6.771 -4.209 -4.585 1.00 0.00 O ATOM 125 N VAL 32 8.829 -3.372 -4.370 1.00 0.00 N ATOM 126 CA VAL 32 9.225 -3.772 -5.718 1.00 0.00 C ATOM 127 C VAL 32 9.784 -5.195 -5.729 1.00 0.00 C ATOM 128 O VAL 32 9.749 -5.835 -6.776 1.00 0.00 O ATOM 129 N SER 33 10.247 -5.703 -4.579 1.00 0.00 N ATOM 130 CA SER 33 10.837 -7.049 -4.512 1.00 0.00 C ATOM 131 C SER 33 10.299 -7.942 -3.408 1.00 0.00 C ATOM 132 O SER 33 11.037 -8.324 -2.490 1.00 0.00 O ATOM 133 N VAL 34 9.031 -8.341 -3.537 1.00 0.00 N ATOM 134 CA VAL 34 8.386 -9.091 -2.476 1.00 0.00 C ATOM 135 C VAL 34 8.816 -10.549 -2.373 1.00 0.00 C ATOM 136 O VAL 34 9.131 -11.195 -3.366 1.00 0.00 O ATOM 137 N ASP 35 8.778 -11.055 -1.153 1.00 0.00 N ATOM 138 CA ASP 35 9.045 -12.454 -0.862 1.00 0.00 C ATOM 139 C ASP 35 7.824 -13.296 -1.201 1.00 0.00 C ATOM 140 O ASP 35 7.967 -14.491 -1.488 1.00 0.00 O ATOM 141 N TRP 36 6.644 -12.659 -1.202 1.00 0.00 N ATOM 142 CA TRP 36 5.387 -13.350 -1.481 1.00 0.00 C ATOM 143 C TRP 36 4.446 -12.397 -2.137 1.00 0.00 C ATOM 144 O TRP 36 4.368 -11.256 -1.737 1.00 0.00 O ATOM 145 N ASN 37 3.739 -12.874 -3.152 1.00 0.00 N ATOM 146 CA ASN 37 2.710 -12.102 -3.856 1.00 0.00 C ATOM 147 C ASN 37 1.436 -12.861 -3.622 1.00 0.00 C ATOM 148 O ASN 37 1.406 -14.073 -3.791 1.00 0.00 O ATOM 149 N ALA 38 0.394 -12.132 -3.220 1.00 0.00 N ATOM 150 CA ALA 38 -0.882 -12.696 -2.819 1.00 0.00 C ATOM 151 C ALA 38 -1.928 -12.081 -3.717 1.00 0.00 C ATOM 152 O ALA 38 -2.054 -10.874 -3.775 1.00 0.00 O ATOM 153 N ILE 39 -2.650 -12.907 -4.457 1.00 0.00 N ATOM 154 CA ILE 39 -3.626 -12.409 -5.416 1.00 0.00 C ATOM 155 C ILE 39 -4.980 -12.941 -4.978 1.00 0.00 C ATOM 156 O ILE 39 -5.275 -14.103 -5.127 1.00 0.00 O ATOM 157 N ASN 40 -5.804 -12.073 -4.424 1.00 0.00 N ATOM 158 CA ASN 40 -7.050 -12.514 -3.858 1.00 0.00 C ATOM 159 C ASN 40 -8.181 -12.504 -4.870 1.00 0.00 C ATOM 160 O ASN 40 -9.320 -12.877 -4.518 1.00 0.00 O ATOM 161 N LYS 41 -7.891 -12.073 -6.106 1.00 0.00 N ATOM 162 CA LYS 41 -8.878 -12.138 -7.205 1.00 0.00 C ATOM 163 C LYS 41 -8.216 -12.684 -8.462 1.00 0.00 C ATOM 164 O LYS 41 -7.462 -11.953 -9.097 1.00 0.00 O ATOM 165 N ASP 42 -8.506 -13.942 -8.833 1.00 0.00 N ATOM 166 CA ASP 42 -7.774 -14.622 -9.945 1.00 0.00 C ATOM 167 C ASP 42 -7.749 -13.795 -11.223 1.00 0.00 C ATOM 168 O ASP 42 -6.835 -13.849 -12.032 1.00 0.00 O ATOM 169 N GLY 43 -8.801 -13.023 -11.364 1.00 0.00 N ATOM 170 CA GLY 43 -8.981 -12.131 -12.466 1.00 0.00 C ATOM 171 C GLY 43 -7.862 -11.142 -12.702 1.00 0.00 C ATOM 172 O GLY 43 -7.685 -10.667 -13.816 1.00 0.00 O ATOM 173 N GLY 44 -7.108 -10.832 -11.661 1.00 0.00 N ATOM 174 CA GLY 44 -6.000 -9.888 -11.767 1.00 0.00 C ATOM 175 C GLY 44 -4.668 -10.553 -12.177 1.00 0.00 C ATOM 176 O GLY 44 -3.664 -9.852 -12.342 1.00 0.00 O ATOM 177 N ASP 45 -4.651 -11.880 -12.336 1.00 0.00 N ATOM 178 CA ASP 45 -3.426 -12.597 -12.657 1.00 0.00 C ATOM 179 C ASP 45 -2.891 -12.138 -14.011 1.00 0.00 C ATOM 180 O ASP 45 -3.642 -12.028 -14.976 1.00 0.00 O ATOM 181 N ASP 46 -1.587 -11.875 -14.059 1.00 0.00 N ATOM 182 CA ASP 46 -0.899 -11.344 -15.241 1.00 0.00 C ATOM 183 C ASP 46 0.582 -11.334 -14.902 1.00 0.00 C ATOM 184 O ASP 46 0.942 -11.346 -13.728 1.00 0.00 O ATOM 185 N LYS 47 1.452 -11.279 -15.915 1.00 0.00 N ATOM 186 CA LYS 47 2.888 -11.292 -15.614 1.00 0.00 C ATOM 187 C LYS 47 3.379 -10.036 -14.869 1.00 0.00 C ATOM 188 O LYS 47 4.395 -10.097 -14.177 1.00 0.00 O ATOM 189 N ASP 48 2.663 -8.917 -15.004 1.00 0.00 N ATOM 190 CA ASP 48 2.982 -7.687 -14.276 1.00 0.00 C ATOM 191 C ASP 48 2.817 -7.873 -12.766 1.00 0.00 C ATOM 192 O ASP 48 3.522 -7.257 -11.963 1.00 0.00 O ATOM 193 N THR 49 1.883 -8.745 -12.398 1.00 0.00 N ATOM 194 CA THR 49 1.511 -8.978 -11.000 1.00 0.00 C ATOM 195 C THR 49 2.610 -9.731 -10.264 1.00 0.00 C ATOM 196 O THR 49 2.587 -9.806 -9.046 1.00 0.00 O ATOM 197 N LEU 50 3.568 -10.274 -11.012 1.00 0.00 N ATOM 198 CA LEU 50 4.633 -11.108 -10.464 1.00 0.00 C ATOM 199 C LEU 50 6.019 -10.434 -10.568 1.00 0.00 C ATOM 200 O LEU 50 7.050 -11.031 -10.255 1.00 0.00 O ATOM 201 N SER 51 6.021 -9.156 -10.936 1.00 0.00 N ATOM 202 CA SER 51 7.251 -8.385 -11.021 1.00 0.00 C ATOM 203 C SER 51 7.974 -8.306 -9.687 1.00 0.00 C ATOM 204 O SER 51 7.364 -8.016 -8.667 1.00 0.00 O ATOM 205 N ARG 52 9.278 -8.570 -9.695 1.00 0.00 N ATOM 206 CA ARG 52 10.084 -8.515 -8.474 1.00 0.00 C ATOM 207 C ARG 52 10.047 -9.770 -7.616 1.00 0.00 C ATOM 208 O ARG 52 10.803 -9.888 -6.638 1.00 0.00 O ATOM 209 N ASN 53 11.036 -13.217 -6.648 1.00 0.00 N ATOM 210 CA ASN 53 12.123 -14.157 -6.835 1.00 0.00 C ATOM 211 C ASN 53 11.600 -15.532 -7.179 1.00 0.00 C ATOM 212 O ASN 53 10.407 -15.790 -7.094 1.00 0.00 O ATOM 213 N GLY 54 12.517 -16.417 -7.541 1.00 0.00 N ATOM 214 CA GLY 54 12.180 -17.790 -7.826 1.00 0.00 C ATOM 215 C GLY 54 12.000 -18.567 -6.524 1.00 0.00 C ATOM 216 O GLY 54 11.124 -19.441 -6.465 1.00 0.00 O ATOM 217 N GLY 55 12.778 -18.254 -5.475 1.00 0.00 N ATOM 218 CA GLY 55 12.529 -18.917 -4.167 1.00 0.00 C ATOM 219 C GLY 55 11.357 -18.280 -3.377 1.00 0.00 C ATOM 220 O GLY 55 11.138 -18.631 -2.229 1.00 0.00 O ATOM 221 N TYR 56 10.572 -17.415 -4.031 1.00 0.00 N ATOM 222 CA TYR 56 9.409 -16.767 -3.424 1.00 0.00 C ATOM 223 C TYR 56 8.117 -17.521 -3.700 1.00 0.00 C ATOM 224 O TYR 56 8.147 -18.533 -4.395 1.00 0.00 O ATOM 225 N LYS 57 6.984 -17.008 -3.185 1.00 0.00 N ATOM 226 CA LYS 57 5.689 -17.687 -3.288 1.00 0.00 C ATOM 227 C LYS 57 4.651 -16.839 -3.957 1.00 0.00 C ATOM 228 O LYS 57 4.531 -15.665 -3.688 1.00 0.00 O ATOM 229 N MET 58 3.874 -17.460 -4.821 1.00 0.00 N ATOM 230 CA MET 58 2.719 -16.814 -5.409 1.00 0.00 C ATOM 231 C MET 58 1.530 -17.552 -4.804 1.00 0.00 C ATOM 232 O MET 58 1.369 -18.752 -4.996 1.00 0.00 O ATOM 233 N VAL 59 0.733 -16.821 -4.028 1.00 0.00 N ATOM 234 CA VAL 59 -0.425 -17.378 -3.342 1.00 0.00 C ATOM 235 C VAL 59 -1.663 -16.777 -4.013 1.00 0.00 C ATOM 236 O VAL 59 -1.722 -15.549 -4.211 1.00 0.00 O ATOM 237 N GLU 60 -2.633 -17.630 -4.377 1.00 0.00 N ATOM 238 CA GLU 60 -3.804 -17.206 -5.164 1.00 0.00 C ATOM 239 C GLU 60 -5.111 -17.817 -4.669 1.00 0.00 C ATOM 240 O GLU 60 -5.165 -18.963 -4.259 1.00 0.00 O ATOM 241 N TYR 61 -6.164 -17.001 -4.719 1.00 0.00 N ATOM 242 CA TYR 61 -7.533 -17.385 -4.375 1.00 0.00 C ATOM 243 C TYR 61 -8.090 -17.837 -5.688 1.00 0.00 C ATOM 244 O TYR 61 -8.421 -17.022 -6.550 1.00 0.00 O ATOM 245 N GLY 62 -8.163 -19.138 -5.871 1.00 0.00 N ATOM 246 CA GLY 62 -8.614 -19.645 -7.135 1.00 0.00 C ATOM 247 C GLY 62 -9.055 -21.048 -6.998 1.00 0.00 C ATOM 248 O GLY 62 -8.527 -21.783 -6.178 1.00 0.00 O ATOM 249 N GLY 63 -10.024 -21.422 -7.819 1.00 0.00 N ATOM 250 CA GLY 63 -10.450 -22.821 -7.902 1.00 0.00 C ATOM 251 C GLY 63 -9.677 -23.573 -9.003 1.00 0.00 C ATOM 252 O GLY 63 -9.835 -24.764 -9.144 1.00 0.00 O ATOM 253 N ALA 64 -8.832 -22.872 -9.757 1.00 0.00 N ATOM 254 CA ALA 64 -8.035 -23.480 -10.802 1.00 0.00 C ATOM 255 C ALA 64 -6.713 -24.040 -10.258 1.00 0.00 C ATOM 256 O ALA 64 -6.490 -24.023 -9.045 1.00 0.00 O ATOM 257 N GLN 65 -5.873 -24.572 -11.151 1.00 0.00 N ATOM 258 CA GLN 65 -4.660 -25.329 -10.769 1.00 0.00 C ATOM 259 C GLN 65 -3.380 -24.571 -11.037 1.00 0.00 C ATOM 260 O GLN 65 -3.393 -23.505 -11.671 1.00 0.00 O ATOM 261 N ALA 66 -2.272 -25.158 -10.585 1.00 0.00 N ATOM 262 CA ALA 66 -0.969 -24.509 -10.690 1.00 0.00 C ATOM 263 C ALA 66 -0.629 -24.156 -12.128 1.00 0.00 C ATOM 264 O ALA 66 -0.120 -23.068 -12.402 1.00 0.00 O ATOM 265 N GLU 67 -0.929 -25.075 -13.041 1.00 0.00 N ATOM 266 CA GLU 67 -0.653 -24.894 -14.467 1.00 0.00 C ATOM 267 C GLU 67 -1.362 -23.668 -15.039 1.00 0.00 C ATOM 268 O GLU 67 -0.776 -22.925 -15.817 1.00 0.00 O ATOM 269 N TRP 68 -2.620 -23.461 -14.654 1.00 0.00 N ATOM 270 CA TRP 68 -3.367 -22.281 -15.098 1.00 0.00 C ATOM 271 C TRP 68 -2.704 -20.989 -14.625 1.00 0.00 C ATOM 272 O TRP 68 -2.545 -20.031 -15.391 1.00 0.00 O ATOM 273 N HIS 69 -2.324 -20.983 -13.352 1.00 0.00 N ATOM 274 CA HIS 69 -1.692 -19.822 -12.734 1.00 0.00 C ATOM 275 C HIS 69 -0.337 -19.536 -13.393 1.00 0.00 C ATOM 276 O HIS 69 0.035 -18.383 -13.623 1.00 0.00 O ATOM 277 N GLU 70 0.386 -20.608 -13.691 1.00 0.00 N ATOM 278 CA GLU 70 1.681 -20.526 -14.357 1.00 0.00 C ATOM 279 C GLU 70 1.558 -19.908 -15.739 1.00 0.00 C ATOM 280 O GLU 70 2.413 -19.134 -16.149 1.00 0.00 O ATOM 281 N GLN 71 0.492 -20.265 -16.453 1.00 0.00 N ATOM 282 CA GLN 71 0.239 -19.761 -17.805 1.00 0.00 C ATOM 283 C GLN 71 -0.053 -18.281 -17.759 1.00 0.00 C ATOM 284 O GLN 71 0.505 -17.516 -18.541 1.00 0.00 O ATOM 285 N ALA 72 -0.930 -17.891 -16.840 1.00 0.00 N ATOM 286 CA ALA 72 -1.355 -16.492 -16.712 1.00 0.00 C ATOM 287 C ALA 72 -0.240 -15.533 -16.271 1.00 0.00 C ATOM 288 O ALA 72 -0.230 -14.365 -16.669 1.00 0.00 O ATOM 289 N GLU 73 0.696 -16.029 -15.469 1.00 0.00 N ATOM 290 CA GLU 73 1.735 -15.180 -14.884 1.00 0.00 C ATOM 291 C GLU 73 3.132 -15.383 -15.463 1.00 0.00 C ATOM 292 O GLU 73 3.900 -14.421 -15.610 1.00 0.00 O ATOM 293 N LYS 74 3.466 -16.632 -15.764 1.00 0.00 N ATOM 294 CA LYS 74 4.812 -16.989 -16.216 1.00 0.00 C ATOM 295 C LYS 74 5.745 -17.186 -15.024 1.00 0.00 C ATOM 296 O LYS 74 6.979 -17.107 -15.147 1.00 0.00 O ATOM 297 N VAL 75 5.152 -17.449 -13.866 1.00 0.00 N ATOM 298 CA VAL 75 5.909 -17.681 -12.667 1.00 0.00 C ATOM 299 C VAL 75 6.272 -19.162 -12.481 1.00 0.00 C ATOM 300 O VAL 75 5.410 -20.032 -12.260 1.00 0.00 O ATOM 301 N GLU 76 7.563 -19.443 -12.605 1.00 0.00 N ATOM 302 CA GLU 76 8.122 -20.727 -12.199 1.00 0.00 C ATOM 303 C GLU 76 8.514 -20.388 -10.781 1.00 0.00 C ATOM 304 O GLU 76 8.978 -19.277 -10.538 1.00 0.00 O ATOM 305 N ALA 77 8.307 -21.294 -9.835 1.00 0.00 N ATOM 306 CA ALA 77 8.466 -20.961 -8.405 1.00 0.00 C ATOM 307 C ALA 77 7.259 -21.511 -7.688 1.00 0.00 C ATOM 308 O ALA 77 6.287 -21.871 -8.332 1.00 0.00 O ATOM 309 N TYR 78 7.304 -21.585 -6.364 1.00 0.00 N ATOM 310 CA TYR 78 6.203 -22.189 -5.633 1.00 0.00 C ATOM 311 C TYR 78 4.935 -21.375 -5.863 1.00 0.00 C ATOM 312 O TYR 78 4.929 -20.168 -5.702 1.00 0.00 O ATOM 313 N LEU 79 3.877 -22.052 -6.279 1.00 0.00 N ATOM 314 CA LEU 79 2.556 -21.457 -6.450 1.00 0.00 C ATOM 315 C LEU 79 1.614 -22.183 -5.504 1.00 0.00 C ATOM 316 O LEU 79 1.511 -23.392 -5.562 1.00 0.00 O ATOM 317 N VAL 80 0.950 -21.445 -4.623 1.00 0.00 N ATOM 318 CA VAL 80 0.003 -22.021 -3.680 1.00 0.00 C ATOM 319 C VAL 80 -1.390 -21.483 -4.039 1.00 0.00 C ATOM 320 O VAL 80 -1.522 -20.318 -4.413 1.00 0.00 O ATOM 321 N GLU 81 -2.415 -22.325 -3.962 1.00 0.00 N ATOM 322 CA GLU 81 -3.776 -21.927 -4.334 1.00 0.00 C ATOM 323 C GLU 81 -4.761 -22.439 -3.285 1.00 0.00 C ATOM 324 O GLU 81 -4.527 -23.468 -2.632 1.00 0.00 O ATOM 325 N LYS 82 -5.862 -21.716 -3.107 1.00 0.00 N ATOM 326 CA LYS 82 -6.886 -22.152 -2.144 1.00 0.00 C ATOM 327 C LYS 82 -8.179 -21.466 -2.540 1.00 0.00 C ATOM 328 O LYS 82 -8.161 -20.342 -2.989 1.00 0.00 O ATOM 329 N GLN 83 -9.292 -22.148 -2.379 1.00 0.00 N ATOM 330 CA GLN 83 -10.613 -21.543 -2.778 1.00 0.00 C ATOM 331 C GLN 83 -11.149 -20.767 -1.590 1.00 0.00 C ATOM 332 O GLN 83 -12.007 -21.254 -0.814 1.00 0.00 O ATOM 333 N ASP 84 -10.615 -19.555 -1.412 1.00 0.00 N ATOM 334 CA ASP 84 -10.895 -18.787 -0.188 1.00 0.00 C ATOM 335 C ASP 84 -12.303 -18.257 -0.256 1.00 0.00 C ATOM 336 O ASP 84 -12.999 -18.220 0.752 1.00 0.00 O ATOM 337 N PRO 85 -12.733 -17.872 -1.444 1.00 0.00 N ATOM 338 CA PRO 85 -14.131 -17.350 -1.582 1.00 0.00 C ATOM 339 C PRO 85 -15.153 -18.304 -1.007 1.00 0.00 C ATOM 340 O PRO 85 -16.002 -17.910 -0.205 1.00 0.00 O ATOM 341 N THR 86 -15.061 -19.561 -1.420 1.00 0.00 N ATOM 342 CA THR 86 -15.969 -20.600 -0.951 1.00 0.00 C ATOM 343 C THR 86 -15.804 -20.959 0.501 1.00 0.00 C ATOM 344 O THR 86 -16.801 -21.203 1.181 1.00 0.00 O ATOM 345 N ASP 87 -14.567 -21.017 1.006 1.00 0.00 N ATOM 346 CA ASP 87 -14.394 -21.167 2.454 1.00 0.00 C ATOM 347 C ASP 87 -15.207 -20.084 3.221 1.00 0.00 C ATOM 348 O ASP 87 -15.962 -20.373 4.177 1.00 0.00 O ATOM 349 N ILE 88 -15.093 -18.842 2.773 1.00 0.00 N ATOM 350 CA ILE 88 -15.788 -17.728 3.416 1.00 0.00 C ATOM 351 C ILE 88 -17.295 -17.815 3.242 1.00 0.00 C ATOM 352 O ILE 88 -18.059 -17.500 4.173 1.00 0.00 O ATOM 353 N LYS 89 -17.768 -18.225 2.067 1.00 0.00 N ATOM 354 CA LYS 89 -19.222 -18.323 1.914 1.00 0.00 C ATOM 355 C LYS 89 -19.764 -19.348 2.890 1.00 0.00 C ATOM 356 O LYS 89 -20.859 -19.188 3.415 1.00 0.00 O ATOM 357 N TYR 90 -18.979 -20.397 3.129 1.00 0.00 N ATOM 358 CA TYR 90 -19.384 -21.456 4.036 1.00 0.00 C ATOM 359 C TYR 90 -19.341 -21.020 5.495 1.00 0.00 C ATOM 360 O TYR 90 -20.251 -21.308 6.283 1.00 0.00 O ATOM 361 N LYS 91 -18.271 -20.329 5.854 1.00 0.00 N ATOM 362 CA LYS 91 -18.026 -20.052 7.248 1.00 0.00 C ATOM 363 C LYS 91 -18.603 -18.740 7.733 1.00 0.00 C ATOM 364 O LYS 91 -19.257 -18.711 8.800 1.00 0.00 O ATOM 365 N ASP 92 -18.337 -17.655 6.992 1.00 0.00 N ATOM 366 CA ASP 92 -18.818 -16.332 7.402 1.00 0.00 C ATOM 367 C ASP 92 -20.048 -15.886 6.575 1.00 0.00 C ATOM 368 O ASP 92 -20.580 -14.809 6.802 1.00 0.00 O ATOM 369 N ASN 93 -20.470 -16.715 5.632 1.00 0.00 N ATOM 370 CA ASN 93 -21.603 -16.398 4.793 1.00 0.00 C ATOM 371 C ASN 93 -21.420 -15.179 3.916 1.00 0.00 C ATOM 372 O ASN 93 -22.377 -14.503 3.612 1.00 0.00 O ATOM 373 N ASP 94 -20.195 -14.944 3.483 1.00 0.00 N ATOM 374 CA ASP 94 -19.830 -13.833 2.602 1.00 0.00 C ATOM 375 CA ASP 94 -19.880 -13.863 2.552 1.00 0.00 C ATOM 376 C ASP 94 -18.730 -14.329 1.684 1.00 0.00 C ATOM 377 O ASP 94 -17.873 -15.085 2.112 1.00 0.00 O ATOM 378 N GLY 95 -18.690 -13.846 0.461 1.00 0.00 N ATOM 379 CA GLY 95 -17.637 -14.241 -0.455 1.00 0.00 C ATOM 380 C GLY 95 -16.397 -13.389 -0.428 1.00 0.00 C ATOM 381 O GLY 95 -15.627 -13.409 -1.386 1.00 0.00 O ATOM 382 N HIS 96 -16.187 -12.655 0.666 1.00 0.00 N ATOM 383 CA HIS 96 -14.951 -11.871 0.869 1.00 0.00 C ATOM 384 C HIS 96 -13.816 -12.822 1.295 1.00 0.00 C ATOM 385 O HIS 96 -13.882 -13.426 2.365 1.00 0.00 O ATOM 386 N THR 97 -12.768 -12.971 0.455 1.00 0.00 N ATOM 387 CA THR 97 -11.772 -14.043 0.642 1.00 0.00 C ATOM 388 C THR 97 -10.576 -13.761 1.515 1.00 0.00 C ATOM 389 O THR 97 -9.697 -14.601 1.627 1.00 0.00 O ATOM 390 N ASP 98 -10.561 -12.603 2.150 1.00 0.00 N ATOM 391 CA ASP 98 -9.389 -12.110 2.804 1.00 0.00 C ATOM 392 C ASP 98 -8.957 -12.914 4.016 1.00 0.00 C ATOM 393 O ASP 98 -7.774 -13.132 4.153 1.00 0.00 O ATOM 394 N ALA 99 -9.885 -13.416 4.843 1.00 0.00 N ATOM 395 CA ALA 99 -9.490 -14.151 6.052 1.00 0.00 C ATOM 396 C ALA 99 -8.925 -15.530 5.742 1.00 0.00 C ATOM 397 O ALA 99 -7.878 -15.913 6.288 1.00 0.00 O ATOM 398 N ILE 100 -9.589 -16.299 4.877 1.00 0.00 N ATOM 399 CA ILE 100 -8.913 -17.534 4.485 1.00 0.00 C ATOM 400 C ILE 100 -7.582 -17.298 3.777 1.00 0.00 C ATOM 401 O ILE 100 -6.654 -18.104 3.915 1.00 0.00 O ATOM 402 N SER 101 -5.482 -14.942 4.482 1.00 0.00 N ATOM 403 CA SER 101 -4.551 -14.765 5.593 1.00 0.00 C ATOM 404 C SER 101 -4.115 -16.074 6.178 1.00 0.00 C ATOM 405 O SER 101 -2.948 -16.265 6.477 1.00 0.00 O ATOM 406 N GLY 102 -5.059 -16.959 6.444 1.00 0.00 N ATOM 407 CA GLY 102 -4.715 -18.262 7.005 1.00 0.00 C ATOM 408 C GLY 102 -3.810 -19.056 6.088 1.00 0.00 C ATOM 409 O GLY 102 -2.804 -19.636 6.506 1.00 0.00 O ATOM 410 N ALA 103 -4.160 -19.101 4.822 1.00 0.00 N ATOM 411 CA ALA 103 -3.269 -19.664 3.785 1.00 0.00 C ATOM 412 C ALA 103 -1.881 -19.071 3.853 1.00 0.00 C ATOM 413 O ALA 103 -0.900 -19.784 3.800 1.00 0.00 O ATOM 414 N THR 104 -1.802 -17.755 3.979 1.00 0.00 N ATOM 415 CA THR 104 -0.511 -17.055 4.053 1.00 0.00 C ATOM 416 C THR 104 0.351 -17.497 5.212 1.00 0.00 C ATOM 417 O THR 104 1.572 -17.686 5.075 1.00 0.00 O ATOM 418 N ILE 105 -0.285 -17.568 6.374 1.00 0.00 N ATOM 419 CA ILE 105 0.380 -17.966 7.582 1.00 0.00 C ATOM 420 C ILE 105 0.876 -19.383 7.415 1.00 0.00 C ATOM 421 O ILE 105 2.004 -19.693 7.760 1.00 0.00 O ATOM 422 N LYS 106 0.031 -20.235 6.854 1.00 0.00 N ATOM 423 CA LYS 106 0.414 -21.601 6.573 1.00 0.00 C ATOM 424 C LYS 106 1.629 -21.699 5.640 1.00 0.00 C ATOM 425 O LYS 106 2.623 -22.339 6.009 1.00 0.00 O ATOM 426 N VAL 107 1.625 -21.046 4.482 1.00 0.00 N ATOM 427 CA VAL 107 2.765 -21.221 3.530 1.00 0.00 C ATOM 428 C VAL 107 4.027 -20.440 3.808 1.00 0.00 C ATOM 429 O VAL 107 5.057 -20.742 3.226 1.00 0.00 O ATOM 430 N LYS 108 3.968 -19.435 4.673 1.00 0.00 N ATOM 431 CA LYS 108 5.156 -18.653 5.023 1.00 0.00 C ATOM 432 C LYS 108 5.608 -18.816 6.467 1.00 0.00 C ATOM 433 O LYS 108 6.725 -18.481 6.798 1.00 0.00 O ATOM 434 N LYS 109 4.716 -19.229 7.352 1.00 0.00 N ATOM 435 CA LYS 109 5.040 -19.248 8.787 1.00 0.00 C ATOM 436 C LYS 109 5.379 -17.881 9.360 1.00 0.00 C ATOM 437 O LYS 109 5.985 -17.804 10.413 1.00 0.00 O ATOM 438 N PHE 110 4.940 -16.790 8.724 1.00 0.00 N ATOM 439 CA PHE 110 5.426 -15.435 9.116 1.00 0.00 C ATOM 440 C PHE 110 5.029 -15.036 10.526 1.00 0.00 C ATOM 441 O PHE 110 5.731 -14.266 11.180 1.00 0.00 O ATOM 442 N PHE 111 -0.575 -18.780 13.894 1.00 0.00 N ATOM 443 CA PHE 111 -1.995 -18.600 13.571 1.00 0.00 C ATOM 444 C PHE 111 -2.771 -18.000 14.779 1.00 0.00 C ATOM 445 O PHE 111 -3.641 -17.132 14.637 1.00 0.00 O ATOM 446 N ASP 112 -2.392 -18.412 15.975 1.00 0.00 N ATOM 447 CA ASP 112 -3.002 -17.911 17.214 1.00 0.00 C ATOM 448 C ASP 112 -2.937 -16.362 17.273 1.00 0.00 C ATOM 449 O ASP 112 -3.858 -15.713 17.768 1.00 0.00 O ATOM 450 N LEU 113 -1.856 -15.772 16.775 1.00 0.00 N ATOM 451 CA LEU 113 -1.717 -14.304 16.775 1.00 0.00 C ATOM 452 C LEU 113 -2.814 -13.600 15.946 1.00 0.00 C ATOM 453 O LEU 113 -3.260 -12.512 16.288 1.00 0.00 O ATOM 454 N ALA 114 -3.217 -14.221 14.854 1.00 0.00 N ATOM 455 CA ALA 114 -4.254 -13.656 13.998 1.00 0.00 C ATOM 456 C ALA 114 -5.593 -13.925 14.604 1.00 0.00 C ATOM 457 O ALA 114 -6.460 -13.085 14.557 1.00 0.00 O ATOM 458 N GLN 115 -5.736 -15.073 15.247 1.00 0.00 N ATOM 459 CA GLN 115 -6.942 -15.362 15.951 1.00 0.00 C ATOM 460 C GLN 115 -7.154 -14.373 17.080 1.00 0.00 C ATOM 461 O GLN 115 -8.260 -13.863 17.243 1.00 0.00 O ATOM 462 N LYS 116 -6.107 -14.086 17.853 1.00 0.00 N ATOM 463 CA LYS 116 -6.195 -13.089 18.949 1.00 0.00 C ATOM 464 C LYS 116 -6.691 -11.756 18.373 1.00 0.00 C ATOM 465 O LYS 116 -7.577 -11.103 18.930 1.00 0.00 O ATOM 466 N ALA 117 -6.133 -11.387 17.229 1.00 0.00 N ATOM 467 CA ALA 117 -6.575 -10.213 16.492 1.00 0.00 C ATOM 468 C ALA 117 -8.018 -10.291 16.000 1.00 0.00 C ATOM 469 O ALA 117 -8.747 -9.298 16.059 1.00 0.00 O ATOM 470 N LEU 118 -8.451 -11.454 15.524 1.00 0.00 N ATOM 471 CA LEU 118 -9.864 -11.623 15.159 1.00 0.00 C ATOM 472 C LEU 118 -10.736 -11.378 16.394 1.00 0.00 C ATOM 473 O LEU 118 -11.728 -10.669 16.302 1.00 0.00 O ATOM 474 N LYS 119 -10.330 -11.916 17.543 1.00 0.00 N ATOM 475 CA LYS 119 -11.035 -11.689 18.821 1.00 0.00 C ATOM 476 C LYS 119 -11.186 -10.192 19.121 1.00 0.00 C ATOM 477 O LYS 119 -12.278 -9.726 19.406 1.00 0.00 O ATOM 478 N ASP 120 -10.101 -9.431 18.998 1.00 0.00 N ATOM 479 CA ASP 120 -10.124 -7.986 19.299 1.00 0.00 C ATOM 480 C ASP 120 -10.919 -7.104 18.314 1.00 0.00 C ATOM 481 O ASP 120 -11.432 -6.075 18.715 1.00 0.00 O ATOM 482 N ALA 121 -13.758 -7.755 17.006 1.00 0.00 N ATOM 483 CA ALA 121 -15.203 -7.978 17.187 1.00 0.00 C ATOM 484 C ALA 121 -15.687 -7.691 18.616 1.00 0.00 C ATOM 485 O ALA 121 -15.111 -8.163 19.595 1.00 0.00 O ATOM 486 N GLU 122 -19.661 -7.633 19.162 1.00 0.00 N ATOM 487 CA GLU 122 -20.165 -8.763 18.386 1.00 0.00 C ATOM 488 C GLU 122 -20.276 -10.018 19.219 1.00 0.00 C ATOM 489 O GLU 122 -19.497 -10.203 20.149 1.00 0.00 O ATOM 490 N LYS 123 -21.215 -10.908 18.856 1.00 0.00 N ATOM 491 CA LYS 123 -21.342 -12.180 19.560 1.00 0.00 C ATOM 492 C LYS 123 -20.250 -13.162 19.133 1.00 0.00 C ATOM 493 O LYS 123 -19.691 -13.042 18.040 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 493 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 83.71 41.4 244 100.0 244 ARMSMC SECONDARY STRUCTURE . . 73.78 51.9 108 100.0 108 ARMSMC SURFACE . . . . . . . . 88.96 37.2 148 100.0 148 ARMSMC BURIED . . . . . . . . 74.89 47.9 96 100.0 96 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 100 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 92 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 48 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 63 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 37 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 81 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 70 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 36 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 54 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 34 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 30 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 16 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 18 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 10 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 15.80 (Number of atoms: 124) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 15.80 124 100.8 123 CRMSCA CRN = ALL/NP . . . . . 0.1275 CRMSCA SECONDARY STRUCTURE . . 14.76 54 100.0 54 CRMSCA SURFACE . . . . . . . . 16.23 76 101.3 75 CRMSCA BURIED . . . . . . . . 15.11 48 100.0 48 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 15.90 493 81.6 604 CRMSMC SECONDARY STRUCTURE . . 14.89 216 80.0 270 CRMSMC SURFACE . . . . . . . . 16.37 301 82.2 366 CRMSMC BURIED . . . . . . . . 15.14 192 80.7 238 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 1399 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 1349 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 687 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 834 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 565 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 15.90 493 26.1 1891 CRMSALL SECONDARY STRUCTURE . . 14.89 216 23.9 903 CRMSALL SURFACE . . . . . . . . 16.37 301 26.5 1134 CRMSALL BURIED . . . . . . . . 15.14 192 25.4 757 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.133 1.000 0.500 124 100.8 123 ERRCA SECONDARY STRUCTURE . . 13.109 1.000 0.500 54 100.0 54 ERRCA SURFACE . . . . . . . . 14.458 1.000 0.500 76 101.3 75 ERRCA BURIED . . . . . . . . 13.617 1.000 0.500 48 100.0 48 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.234 1.000 0.500 493 81.6 604 ERRMC SECONDARY STRUCTURE . . 13.240 1.000 0.500 216 80.0 270 ERRMC SURFACE . . . . . . . . 14.610 1.000 0.500 301 82.2 366 ERRMC BURIED . . . . . . . . 13.643 1.000 0.500 192 80.7 238 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 1399 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 1349 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 687 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 834 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 565 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.234 1.000 0.500 493 26.1 1891 ERRALL SECONDARY STRUCTURE . . 13.240 1.000 0.500 216 23.9 903 ERRALL SURFACE . . . . . . . . 14.610 1.000 0.500 301 26.5 1134 ERRALL BURIED . . . . . . . . 13.643 1.000 0.500 192 25.4 757 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 2 4 9 39 123 123 DISTCA CA (P) 0.81 1.63 3.25 7.32 31.71 123 DISTCA CA (RMS) 0.68 0.86 1.89 2.97 7.12 DISTCA ALL (N) 1 5 14 42 156 492 1891 DISTALL ALL (P) 0.05 0.26 0.74 2.22 8.25 1891 DISTALL ALL (RMS) 0.68 1.36 2.21 3.51 7.10 DISTALL END of the results output