####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # ERROR! Check molecule: 1 and the amino acid number 11 and name ASP # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 11 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 19 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 19 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 24 and name ILE # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 24 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 28 and name ASN # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 28 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 39 and name ILE # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 39 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 51 and name SER # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 51 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 53 and name ASN # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 53 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 57 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 57 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 61 and name TYR # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 61 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 63 and name GLY # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 63 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 63 and name GLY # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 63 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 82 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 82 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 83 and name GLN # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 83 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 89 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 89 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 90 and name TYR # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 90 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 91 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 91 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 95 and name GLY # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 95 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 100 and name ILE # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 100 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 101 and name SER # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 101 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 101 and name SER # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 101 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 104 and name THR # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 104 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 105 and name ILE # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 105 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 108 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 108 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 119 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 119 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 119 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 119 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 11 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 19 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 24 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 28 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 39 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 51 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 53 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 57 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 61 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 63 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 63 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 82 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 83 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 89 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 90 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 91 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 95 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 100 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 101 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 101 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 104 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 105 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 108 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 119 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 119 (molecule: 1) # Only one atom (first) is used for calculations. # Molecule1: number of CA atoms 96 ( 424), selected 96 , name T0562AL285_1-D1 # Molecule2: number of CA atoms 123 ( 1891), selected 96 , name T0562-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0562AL285_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 38 5 - 43 4.85 12.76 LCS_AVERAGE: 24.24 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 19 - 38 1.91 14.04 LCS_AVERAGE: 9.14 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 107 - 119 0.56 15.07 LCS_AVERAGE: 4.90 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 96 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 5 T 5 6 9 38 4 5 6 7 8 9 11 12 17 31 44 49 50 54 56 59 60 61 62 64 LCS_GDT Y 6 Y 6 6 9 38 4 5 6 7 8 9 11 12 23 34 44 49 50 54 56 59 60 61 62 64 LCS_GDT Y 7 Y 7 6 9 38 3 5 6 7 8 10 11 14 23 32 44 49 50 54 56 59 60 61 62 64 LCS_GDT A 8 A 8 6 9 38 4 5 6 7 8 10 11 15 23 32 44 49 50 54 56 59 60 61 62 64 LCS_GDT E 9 E 9 6 9 38 4 5 6 6 8 9 11 15 23 31 44 49 50 54 56 59 60 61 62 64 LCS_GDT A 10 A 10 6 9 38 3 5 6 7 8 9 14 18 23 30 39 49 50 54 56 59 60 61 62 64 LCS_GDT D 11 D 11 4 9 38 3 5 6 7 8 9 14 18 23 32 44 49 50 54 56 59 60 61 62 64 LCS_GDT D 12 D 12 3 9 38 3 5 6 7 8 9 14 18 23 32 44 49 50 54 56 59 60 61 62 64 LCS_GDT F 13 F 13 3 9 38 3 5 6 6 10 13 19 32 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT E 15 E 15 3 8 38 3 3 3 5 7 9 14 18 28 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT S 16 S 16 3 10 38 3 5 10 12 16 17 23 30 36 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT G 17 G 17 4 10 38 3 8 11 13 16 30 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT W 18 W 18 5 19 38 3 5 6 14 29 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT K 19 K 19 5 20 38 4 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT D 20 D 20 5 20 38 5 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT T 21 T 21 7 20 38 4 11 21 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT V 22 V 22 7 20 38 4 8 11 17 27 31 33 35 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT T 23 T 23 7 20 38 6 9 21 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT I 24 I 24 7 20 38 6 9 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT E 25 E 25 7 20 38 6 15 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT V 26 V 26 7 20 38 6 8 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT K 27 K 27 7 20 38 6 8 19 27 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT N 28 N 28 3 20 38 3 10 21 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT G 29 G 29 3 20 38 3 3 13 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT K 30 K 30 3 20 38 3 3 5 11 18 30 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT I 31 I 31 8 20 38 6 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT V 32 V 32 8 20 38 5 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT S 33 S 33 8 20 38 5 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT V 34 V 34 8 20 38 5 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT D 35 D 35 8 20 38 5 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT W 36 W 36 8 20 38 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT N 37 N 37 8 20 38 4 8 21 27 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT A 38 A 38 8 20 38 4 8 12 27 29 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT I 39 I 39 6 16 38 4 8 11 16 22 30 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT N 40 N 40 6 11 38 3 8 11 13 17 24 34 36 37 39 44 49 50 54 55 59 59 61 62 64 LCS_GDT K 41 K 41 3 4 38 3 3 4 5 10 12 17 19 24 31 37 43 48 51 54 56 57 60 61 64 LCS_GDT D 42 D 42 3 4 38 3 3 4 5 8 12 14 19 21 23 32 39 46 50 54 56 57 58 61 63 LCS_GDT G 43 G 43 4 5 38 3 4 4 7 10 12 15 19 21 28 32 38 45 50 54 56 57 58 61 63 LCS_GDT G 44 G 44 4 5 36 3 4 4 5 6 8 10 14 17 23 25 27 31 35 36 47 54 56 58 61 LCS_GDT D 45 D 45 4 5 36 3 4 4 5 6 8 9 14 17 23 25 27 31 35 36 40 47 51 58 60 LCS_GDT D 46 D 46 4 7 36 3 4 4 6 7 8 10 14 17 23 25 28 31 40 46 52 57 58 61 63 LCS_GDT K 47 K 47 4 7 36 3 4 4 6 7 14 15 19 24 31 37 41 48 51 54 56 57 60 62 64 LCS_GDT D 48 D 48 4 7 36 4 4 4 6 9 10 15 19 21 23 32 36 43 47 54 56 57 58 61 63 LCS_GDT T 49 T 49 4 7 36 4 4 4 6 7 8 10 17 20 23 25 30 39 45 54 56 57 58 61 63 LCS_GDT L 50 L 50 4 7 36 4 4 4 6 7 8 14 16 16 24 34 43 48 51 54 56 57 60 61 64 LCS_GDT S 51 S 51 4 7 36 4 4 4 6 7 11 17 19 27 32 39 45 49 51 54 56 57 60 61 64 LCS_GDT R 52 R 52 4 7 22 3 4 4 5 7 8 10 16 17 21 28 38 43 48 54 56 57 58 61 63 LCS_GDT N 53 N 53 4 5 22 3 4 4 6 7 8 10 13 15 19 26 30 34 41 46 50 54 57 58 60 LCS_GDT G 54 G 54 4 5 22 3 4 4 5 6 8 10 12 15 19 24 26 27 29 36 47 54 56 58 60 LCS_GDT G 55 G 55 3 4 22 3 3 4 6 7 8 10 12 14 16 19 22 24 26 29 32 33 36 38 43 LCS_GDT Y 56 Y 56 3 4 22 3 3 3 6 9 10 11 12 14 16 19 22 24 27 30 32 33 37 42 47 LCS_GDT K 57 K 57 3 6 22 3 3 5 6 9 10 11 12 14 16 19 22 24 27 30 32 33 36 38 39 LCS_GDT M 58 M 58 4 6 22 3 4 4 6 9 10 11 12 14 15 19 22 24 27 30 32 33 36 38 38 LCS_GDT V 59 V 59 4 6 22 3 4 5 5 6 8 9 12 13 15 16 17 20 22 25 25 27 29 32 33 LCS_GDT E 60 E 60 4 6 22 3 4 5 5 6 7 10 12 14 15 16 19 22 23 25 28 30 30 32 35 LCS_GDT Y 61 Y 61 4 6 22 1 4 5 6 9 10 11 12 14 15 19 22 24 27 30 32 33 36 38 38 LCS_GDT G 62 G 62 4 6 22 2 3 5 6 9 10 11 12 14 16 19 22 24 27 30 32 33 36 38 38 LCS_GDT G 63 G 63 4 6 22 1 3 4 6 9 10 11 12 14 15 19 22 24 27 30 32 33 36 38 38 LCS_GDT A 64 A 64 4 6 22 3 3 4 6 9 10 11 12 14 16 19 22 24 27 30 32 34 36 38 42 LCS_GDT Q 65 Q 65 3 6 22 3 3 4 6 7 10 11 12 14 15 17 20 24 27 30 33 37 46 51 58 LCS_GDT A 66 A 66 3 6 22 3 3 4 6 9 10 11 12 14 15 17 19 24 30 37 44 54 56 61 63 LCS_GDT V 80 V 80 3 4 5 3 3 3 4 4 4 4 6 6 6 7 18 19 30 32 38 44 47 53 55 LCS_GDT E 81 E 81 3 4 12 3 3 3 4 4 4 4 6 6 6 9 10 11 13 14 27 28 41 53 55 LCS_GDT K 82 K 82 3 4 15 3 3 3 4 4 4 4 7 9 9 11 12 28 30 43 46 47 48 53 55 LCS_GDT Q 83 Q 83 3 4 15 3 3 3 4 4 4 4 6 6 6 7 9 10 13 16 25 38 41 45 55 LCS_GDT K 89 K 89 4 7 17 4 4 9 11 15 22 33 36 37 38 40 42 45 53 56 59 60 61 62 64 LCS_GDT Y 90 Y 90 4 7 18 4 4 5 5 13 17 17 21 30 35 40 43 49 54 55 59 60 61 62 64 LCS_GDT K 91 K 91 4 8 23 4 4 4 5 12 13 16 21 25 30 36 41 47 51 55 57 60 61 62 64 LCS_GDT D 92 D 92 4 8 23 4 4 5 5 8 10 10 11 15 18 20 27 30 40 47 52 56 58 61 63 LCS_GDT N 93 N 93 4 8 23 3 4 6 6 8 10 10 11 15 18 20 24 26 28 30 36 38 46 53 60 LCS_GDT D 94 D 94 5 8 24 3 5 6 6 8 10 10 11 15 18 20 24 26 28 34 36 43 55 61 63 LCS_GDT G 95 G 95 5 8 25 3 5 6 6 8 10 10 11 15 18 20 27 30 32 43 45 54 57 61 63 LCS_GDT H 96 H 96 5 8 25 3 5 6 6 7 12 14 18 20 24 28 31 37 47 51 53 57 60 61 63 LCS_GDT T 97 T 97 5 8 25 3 5 6 7 10 13 16 21 25 30 37 43 48 54 55 59 60 61 62 64 LCS_GDT D 98 D 98 5 9 25 3 5 6 6 8 10 13 17 24 35 37 44 50 54 56 59 60 61 62 64 LCS_GDT A 99 A 99 4 9 25 3 4 4 5 7 11 14 20 31 37 40 42 46 51 56 59 60 61 62 62 LCS_GDT I 100 I 100 6 9 25 3 4 6 14 17 22 27 32 36 39 40 42 46 51 56 59 60 61 62 64 LCS_GDT S 101 S 101 6 9 25 3 5 8 14 17 25 31 35 37 39 40 42 46 53 56 59 60 61 62 64 LCS_GDT G 102 G 102 6 9 25 3 5 6 8 13 20 23 30 36 38 39 42 45 49 55 58 60 61 62 64 LCS_GDT A 103 A 103 6 9 25 3 5 8 12 19 25 29 35 37 39 40 43 46 53 56 59 60 61 62 64 LCS_GDT T 104 T 104 6 9 25 3 5 7 11 14 23 29 35 37 39 41 49 50 54 56 59 60 61 62 64 LCS_GDT I 105 I 105 6 15 25 3 5 6 9 14 23 27 35 37 39 41 49 50 54 56 59 60 61 62 64 LCS_GDT K 106 K 106 11 15 25 3 3 8 23 28 30 33 35 37 39 40 46 50 54 56 59 60 61 62 64 LCS_GDT V 107 V 107 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT K 108 K 108 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT K 109 K 109 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT F 110 F 110 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT F 111 F 111 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT D 112 D 112 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT L 113 L 113 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT A 114 A 114 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT Q 115 Q 115 13 15 25 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT K 116 K 116 13 15 25 4 13 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT A 117 A 117 13 15 25 4 13 16 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT L 118 L 118 13 15 25 3 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 LCS_GDT K 119 K 119 13 15 25 10 17 23 28 30 32 35 36 37 39 42 49 50 54 56 59 60 61 62 64 LCS_AVERAGE LCS_A: 12.76 ( 4.90 9.14 24.24 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 17 23 28 30 32 35 36 37 39 44 49 50 54 56 59 60 61 62 64 GDT PERCENT_AT 8.13 13.82 18.70 22.76 24.39 26.02 28.46 29.27 30.08 31.71 35.77 39.84 40.65 43.90 45.53 47.97 48.78 49.59 50.41 52.03 GDT RMS_LOCAL 0.36 0.64 0.90 1.17 1.27 1.50 1.95 2.12 2.21 2.59 3.84 4.00 4.06 4.40 4.51 4.77 4.95 5.01 5.17 5.59 GDT RMS_ALL_AT 14.51 14.48 14.40 14.39 14.32 14.17 13.84 13.68 13.71 13.54 13.33 13.22 13.55 13.37 14.00 13.84 13.90 13.81 13.71 13.27 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 5 T 5 8.785 3 0.084 0.084 9.213 2.500 1.429 LGA Y 6 Y 6 8.663 8 0.011 0.011 8.663 3.333 1.111 LGA Y 7 Y 7 8.939 8 0.103 0.103 9.213 2.143 0.714 LGA A 8 A 8 9.130 1 0.029 0.029 9.130 2.143 1.714 LGA E 9 E 9 9.081 5 0.103 0.103 9.176 1.429 0.635 LGA A 10 A 10 9.313 1 0.020 0.020 9.313 2.143 1.714 LGA D 11 D 11 8.132 4 0.641 0.641 9.159 3.452 1.726 LGA D 12 D 12 7.883 4 0.128 0.128 7.883 15.714 7.857 LGA F 13 F 13 6.301 7 0.033 0.033 8.139 11.310 4.113 LGA E 15 E 15 7.799 5 0.553 0.553 8.731 7.500 3.333 LGA S 16 S 16 7.003 2 0.239 0.239 8.015 12.262 8.175 LGA G 17 G 17 4.084 0 0.156 0.156 4.511 40.476 40.476 LGA W 18 W 18 2.960 10 0.213 0.213 2.960 67.143 19.184 LGA K 19 K 19 0.908 5 0.198 0.198 1.472 85.952 38.201 LGA D 20 D 20 2.106 4 0.127 0.127 3.309 61.190 30.595 LGA T 21 T 21 2.691 3 0.093 0.093 3.113 57.262 32.721 LGA V 22 V 22 4.399 3 0.250 0.250 4.399 40.238 22.993 LGA T 23 T 23 2.582 3 0.153 0.153 3.112 63.214 36.122 LGA I 24 I 24 1.694 4 0.112 0.112 1.968 77.143 38.571 LGA E 25 E 25 1.545 5 0.160 0.160 1.545 81.548 36.243 LGA V 26 V 26 2.061 3 0.079 0.079 2.744 64.881 37.075 LGA K 27 K 27 3.123 5 0.129 0.129 3.123 57.262 25.450 LGA N 28 N 28 1.690 4 0.248 0.248 2.701 66.905 33.452 LGA G 29 G 29 3.103 0 0.115 0.115 3.103 55.476 55.476 LGA K 30 K 30 3.406 5 0.595 0.595 5.851 43.333 19.259 LGA I 31 I 31 1.789 4 0.007 0.007 2.386 70.833 35.417 LGA V 32 V 32 1.020 3 0.042 0.042 1.671 81.548 46.599 LGA S 33 S 33 1.115 2 0.044 0.044 1.306 81.429 54.286 LGA V 34 V 34 1.568 3 0.061 0.061 2.012 70.833 40.476 LGA D 35 D 35 1.285 4 0.044 0.044 1.925 79.286 39.643 LGA W 36 W 36 1.523 10 0.086 0.086 1.523 86.190 24.626 LGA N 37 N 37 1.233 4 0.042 0.042 1.233 81.429 40.714 LGA A 38 A 38 1.643 1 0.078 0.078 2.214 68.810 55.048 LGA I 39 I 39 3.349 4 0.630 0.630 4.342 46.905 23.452 LGA N 40 N 40 5.046 4 0.524 0.524 9.487 16.548 8.274 LGA K 41 K 41 10.739 5 0.536 0.536 13.234 1.190 0.529 LGA D 42 D 42 14.517 4 0.623 0.623 17.749 0.000 0.000 LGA G 43 G 43 15.965 0 0.585 0.585 20.218 0.000 0.000 LGA G 44 G 44 21.923 0 0.046 0.046 23.912 0.000 0.000 LGA D 45 D 45 20.469 4 0.265 0.265 20.469 0.000 0.000 LGA D 46 D 46 15.082 4 0.636 0.636 17.286 0.000 0.000 LGA K 47 K 47 9.848 5 0.129 0.129 11.787 0.238 0.106 LGA D 48 D 48 14.198 4 0.207 0.207 14.853 0.000 0.000 LGA T 49 T 49 15.758 3 0.137 0.137 15.758 0.000 0.000 LGA L 50 L 50 11.770 4 0.151 0.151 12.679 0.000 0.000 LGA S 51 S 51 11.492 2 0.609 0.609 14.499 0.000 0.000 LGA R 52 R 52 15.971 7 0.060 0.060 20.100 0.000 0.000 LGA N 53 N 53 22.288 4 0.045 0.045 24.701 0.000 0.000 LGA G 54 G 54 21.240 0 0.354 0.354 23.842 0.000 0.000 LGA G 55 G 55 22.128 0 0.400 0.400 23.483 0.000 0.000 LGA Y 56 Y 56 22.585 8 0.559 0.559 26.281 0.000 0.000 LGA K 57 K 57 26.917 5 0.672 0.672 26.917 0.000 0.000 LGA M 58 M 58 26.468 4 0.673 0.673 30.838 0.000 0.000 LGA V 59 V 59 31.647 3 0.633 0.633 34.600 0.000 0.000 LGA E 60 E 60 34.885 5 0.594 0.594 34.885 0.000 0.000 LGA Y 61 Y 61 34.037 8 0.677 0.677 34.866 0.000 0.000 LGA G 62 G 62 37.180 0 0.372 0.372 37.180 0.000 0.000 LGA G 63 G 63 33.448 0 0.585 0.585 34.698 0.000 0.000 LGA A 64 A 64 26.945 1 0.047 0.047 29.326 0.000 0.000 LGA Q 65 Q 65 21.897 5 0.169 0.169 23.381 0.000 0.000 LGA A 66 A 66 18.310 1 0.485 0.485 20.089 0.000 0.000 LGA V 80 V 80 13.533 3 0.572 0.572 15.150 0.000 0.000 LGA E 81 E 81 16.010 5 0.665 0.665 16.010 0.000 0.000 LGA K 82 K 82 15.071 5 0.619 0.619 18.341 0.000 0.000 LGA Q 83 Q 83 18.056 5 0.113 0.113 19.335 0.000 0.000 LGA K 89 K 89 7.524 5 0.200 0.200 8.480 10.595 4.709 LGA Y 90 Y 90 8.331 8 0.045 0.045 8.331 6.667 2.222 LGA K 91 K 91 10.683 5 0.251 0.251 14.854 0.119 0.053 LGA D 92 D 92 17.497 4 0.200 0.200 18.649 0.000 0.000 LGA N 93 N 93 22.325 4 0.046 0.046 22.916 0.000 0.000 LGA D 94 D 94 19.593 4 0.545 0.545 20.248 0.000 0.000 LGA G 95 G 95 16.059 0 0.480 0.480 17.667 0.000 0.000 LGA H 96 H 96 12.496 6 0.114 0.114 14.220 0.000 0.000 LGA T 97 T 97 8.612 3 0.094 0.094 9.436 7.857 4.490 LGA D 98 D 98 6.899 4 0.612 0.612 9.078 7.976 3.988 LGA A 99 A 99 8.566 1 0.612 0.612 8.689 5.952 4.762 LGA I 100 I 100 8.723 4 0.553 0.553 10.748 2.262 1.131 LGA S 101 S 101 8.155 2 0.083 0.083 10.587 3.333 2.222 LGA G 102 G 102 10.246 0 0.162 0.162 10.246 0.833 0.833 LGA A 103 A 103 7.444 1 0.315 0.315 8.215 10.357 8.286 LGA T 104 T 104 6.760 3 0.234 0.234 7.465 12.500 7.143 LGA I 105 I 105 7.075 4 0.626 0.626 7.601 11.071 5.536 LGA K 106 K 106 5.430 5 0.588 0.588 5.430 36.071 16.032 LGA V 107 V 107 2.310 3 0.190 0.190 3.497 67.262 38.435 LGA K 108 K 108 1.231 5 0.023 0.023 1.585 81.548 36.243 LGA K 109 K 109 1.307 5 0.012 0.012 1.314 81.429 36.190 LGA F 110 F 110 1.476 7 0.039 0.039 1.497 83.690 30.433 LGA F 111 F 111 1.087 7 0.124 0.124 1.184 85.952 31.255 LGA D 112 D 112 0.589 4 0.077 0.077 0.756 90.476 45.238 LGA L 113 L 113 0.486 4 0.125 0.125 0.587 95.238 47.619 LGA A 114 A 114 0.349 1 0.076 0.076 0.663 97.619 78.095 LGA Q 115 Q 115 0.564 5 0.062 0.062 0.719 92.857 41.270 LGA K 116 K 116 1.399 5 0.099 0.099 2.024 77.381 34.392 LGA A 117 A 117 1.790 1 0.033 0.033 1.790 77.143 61.714 LGA L 118 L 118 0.811 4 0.266 0.266 0.912 90.476 45.238 LGA K 119 K 119 1.387 5 0.023 0.023 1.387 85.952 38.201 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 96 384 384 100.00 748 384 51.34 123 SUMMARY(RMSD_GDC): 12.141 12.179 12.179 23.039 12.140 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 96 123 4.0 36 2.12 28.455 23.925 1.623 LGA_LOCAL RMSD: 2.118 Number of atoms: 36 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.683 Number of assigned atoms: 96 Std_ASGN_ATOMS RMSD: 12.141 Standard rmsd on all 96 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.654128 * X + 0.601762 * Y + 0.458257 * Z + -19.041731 Y_new = -0.629329 * X + -0.096901 * Y + -0.771074 * Z + 22.600843 Z_new = -0.419597 * X + -0.792776 * Y + 0.442092 * Z + 56.535072 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.375514 0.433002 -1.062098 [DEG: -136.1069 24.8092 -60.8538 ] ZXZ: 0.536225 1.112867 -2.654799 [DEG: 30.7234 63.7626 -152.1088 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0562AL285_1-D1 REMARK 2: T0562-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0562AL285_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 96 123 4.0 36 2.12 23.925 12.14 REMARK ---------------------------------------------------------- MOLECULE T0562AL285_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 3lwxA ATOM 1 N THR 5 13.949 -12.540 8.924 1.00 0.00 N ATOM 2 CA THR 5 13.096 -11.417 8.536 1.00 0.00 C ATOM 3 C THR 5 11.712 -12.023 8.333 1.00 0.00 C ATOM 4 O THR 5 11.591 -13.059 7.670 1.00 0.00 O ATOM 5 N TYR 6 10.682 -11.383 8.877 1.00 0.00 N ATOM 6 CA TYR 6 9.319 -11.887 8.776 1.00 0.00 C ATOM 7 C TYR 6 8.561 -11.059 7.748 1.00 0.00 C ATOM 8 O TYR 6 8.402 -9.851 7.925 1.00 0.00 O ATOM 9 N TYR 7 8.090 -11.725 6.701 1.00 0.00 N ATOM 10 CA TYR 7 7.403 -11.084 5.586 1.00 0.00 C ATOM 11 C TYR 7 5.914 -11.404 5.694 1.00 0.00 C ATOM 12 O TYR 7 5.518 -12.576 5.832 1.00 0.00 O ATOM 13 N ALA 8 5.089 -10.357 5.655 1.00 0.00 N ATOM 14 CA ALA 8 3.654 -10.410 5.830 1.00 0.00 C ATOM 15 C ALA 8 2.966 -9.861 4.593 1.00 0.00 C ATOM 16 O ALA 8 3.504 -8.998 3.901 1.00 0.00 O ATOM 17 N GLU 9 1.792 -10.411 4.313 1.00 0.00 N ATOM 18 CA GLU 9 1.023 -10.086 3.119 1.00 0.00 C ATOM 19 C GLU 9 -0.057 -9.050 3.409 1.00 0.00 C ATOM 20 O GLU 9 -0.805 -9.166 4.388 1.00 0.00 O ATOM 21 N ALA 10 -0.163 -8.077 2.523 1.00 0.00 N ATOM 22 CA ALA 10 -1.097 -6.983 2.604 1.00 0.00 C ATOM 23 C ALA 10 -2.162 -7.072 1.519 1.00 0.00 C ATOM 24 O ALA 10 -1.908 -7.530 0.399 1.00 0.00 O ATOM 25 N ASP 11 -3.359 -6.588 1.839 1.00 0.00 N ATOM 26 CA ASP 11 -4.444 -6.503 0.859 1.00 0.00 C ATOM 27 CA ASP 11 -4.452 -6.523 0.881 1.00 0.00 C ATOM 28 C ASP 11 -5.338 -5.339 1.253 1.00 0.00 C ATOM 29 O ASP 11 -5.510 -5.055 2.421 1.00 0.00 O ATOM 30 N ASP 12 -5.896 -4.657 0.263 1.00 0.00 N ATOM 31 CA ASP 12 -6.730 -3.494 0.549 1.00 0.00 C ATOM 32 C ASP 12 -7.328 -2.907 -0.708 1.00 0.00 C ATOM 33 O ASP 12 -7.473 -3.588 -1.720 1.00 0.00 O ATOM 34 N PHE 13 -7.673 -1.623 -0.617 1.00 0.00 N ATOM 35 CA PHE 13 -8.469 -0.953 -1.632 1.00 0.00 C ATOM 36 C PHE 13 -7.903 0.398 -1.988 1.00 0.00 C ATOM 37 O PHE 13 -7.525 1.158 -1.110 1.00 0.00 O ATOM 38 N GLU 15 -7.881 0.683 -3.284 1.00 0.00 N ATOM 39 CA GLU 15 -7.429 1.959 -3.792 1.00 0.00 C ATOM 40 C GLU 15 -8.576 2.759 -4.375 1.00 0.00 C ATOM 41 O GLU 15 -9.747 2.512 -4.086 1.00 0.00 O ATOM 42 N SER 16 -8.230 3.719 -5.216 1.00 0.00 N ATOM 43 CA SER 16 -9.233 4.556 -5.843 1.00 0.00 C ATOM 44 C SER 16 -10.022 3.816 -6.917 1.00 0.00 C ATOM 45 O SER 16 -11.249 3.953 -7.002 1.00 0.00 O ATOM 46 N GLY 17 -9.325 3.034 -7.731 1.00 0.00 N ATOM 47 CA GLY 17 -9.936 2.393 -8.900 1.00 0.00 C ATOM 48 C GLY 17 -9.959 0.880 -8.855 1.00 0.00 C ATOM 49 O GLY 17 -10.531 0.248 -9.743 1.00 0.00 O ATOM 50 N TRP 18 -9.365 0.288 -7.834 1.00 0.00 N ATOM 51 CA TRP 18 -9.355 -1.150 -7.720 1.00 0.00 C ATOM 52 C TRP 18 -8.550 -1.566 -6.515 1.00 0.00 C ATOM 53 O TRP 18 -8.109 -0.737 -5.735 1.00 0.00 O ATOM 54 N LYS 19 -8.367 -2.875 -6.345 1.00 0.00 N ATOM 55 CA LYS 19 -7.618 -3.422 -5.222 1.00 0.00 C ATOM 56 CA LYS 19 -7.648 -3.340 -5.168 1.00 0.00 C ATOM 57 C LYS 19 -6.156 -3.014 -5.164 1.00 0.00 C ATOM 58 O LYS 19 -5.552 -2.691 -6.197 1.00 0.00 O ATOM 59 N ASP 20 -5.612 -3.065 -3.953 1.00 0.00 N ATOM 60 CA ASP 20 -4.211 -2.908 -3.655 1.00 0.00 C ATOM 61 C ASP 20 -3.745 -4.180 -2.953 1.00 0.00 C ATOM 62 O ASP 20 -4.542 -4.887 -2.342 1.00 0.00 O ATOM 63 N THR 21 -2.447 -4.446 -3.017 1.00 0.00 N ATOM 64 CA THR 21 -1.862 -5.523 -2.227 1.00 0.00 C ATOM 65 C THR 21 -0.386 -5.205 -2.034 1.00 0.00 C ATOM 66 O THR 21 0.106 -4.171 -2.477 1.00 0.00 O ATOM 67 N VAL 22 0.350 -6.088 -1.366 1.00 0.00 N ATOM 68 CA VAL 22 1.752 -5.864 -1.156 1.00 0.00 C ATOM 69 C VAL 22 2.311 -6.806 -0.118 1.00 0.00 C ATOM 70 O VAL 22 1.629 -7.737 0.331 1.00 0.00 O ATOM 71 N THR 23 3.557 -6.556 0.235 1.00 0.00 N ATOM 72 CA THR 23 4.265 -7.319 1.259 1.00 0.00 C ATOM 73 C THR 23 5.108 -6.357 2.074 1.00 0.00 C ATOM 74 O THR 23 5.639 -5.381 1.533 1.00 0.00 O ATOM 75 N ILE 24 5.255 -6.647 3.355 1.00 0.00 N ATOM 76 CA ILE 24 6.113 -5.846 4.204 1.00 0.00 C ATOM 77 CA ILE 24 6.068 -5.842 4.265 1.00 0.00 C ATOM 78 C ILE 24 6.886 -6.789 5.115 1.00 0.00 C ATOM 79 O ILE 24 6.328 -7.772 5.613 1.00 0.00 O ATOM 80 N GLU 25 8.174 -6.508 5.278 1.00 0.00 N ATOM 81 CA GLU 25 9.012 -7.355 6.107 1.00 0.00 C ATOM 82 C GLU 25 9.485 -6.582 7.326 1.00 0.00 C ATOM 83 O GLU 25 9.695 -5.363 7.271 1.00 0.00 O ATOM 84 N VAL 26 9.682 -7.314 8.418 1.00 0.00 N ATOM 85 CA VAL 26 10.244 -6.765 9.627 1.00 0.00 C ATOM 86 C VAL 26 11.488 -7.548 10.048 1.00 0.00 C ATOM 87 O VAL 26 11.673 -8.723 9.703 1.00 0.00 O ATOM 88 N LYS 27 12.323 -6.846 10.798 1.00 0.00 N ATOM 89 CA LYS 27 13.517 -7.389 11.404 1.00 0.00 C ATOM 90 C LYS 27 13.162 -8.424 12.475 1.00 0.00 C ATOM 91 O LYS 27 11.997 -8.664 12.792 1.00 0.00 O ATOM 92 N ASN 28 14.189 -9.021 13.068 1.00 0.00 N ATOM 93 CA ASN 28 13.976 -10.083 14.049 1.00 0.00 C ATOM 94 CA ASN 28 14.017 -10.074 14.065 1.00 0.00 C ATOM 95 C ASN 28 13.250 -9.609 15.304 1.00 0.00 C ATOM 96 O ASN 28 12.687 -10.427 16.031 1.00 0.00 O ATOM 97 N GLY 29 13.241 -8.296 15.549 1.00 0.00 N ATOM 98 CA GLY 29 12.472 -7.721 16.664 1.00 0.00 C ATOM 99 C GLY 29 10.950 -7.723 16.423 1.00 0.00 C ATOM 100 O GLY 29 10.193 -7.319 17.296 1.00 0.00 O ATOM 101 N LYS 30 10.509 -8.156 15.242 1.00 0.00 N ATOM 102 CA LYS 30 9.079 -8.235 14.928 1.00 0.00 C ATOM 103 C LYS 30 8.412 -6.860 15.087 1.00 0.00 C ATOM 104 O LYS 30 7.253 -6.763 15.484 1.00 0.00 O ATOM 105 N ILE 31 10.557 -2.206 10.408 1.00 0.00 N ATOM 106 CA ILE 31 10.386 -2.576 9.019 1.00 0.00 C ATOM 107 C ILE 31 11.724 -2.635 8.300 1.00 0.00 C ATOM 108 O ILE 31 12.552 -1.724 8.386 1.00 0.00 O ATOM 109 N VAL 32 11.924 -3.724 7.561 1.00 0.00 N ATOM 110 CA VAL 32 13.133 -3.983 6.782 1.00 0.00 C ATOM 111 C VAL 32 12.941 -3.595 5.296 1.00 0.00 C ATOM 112 O VAL 32 13.876 -3.092 4.645 1.00 0.00 O ATOM 113 N SER 33 11.744 -3.793 4.764 1.00 0.00 N ATOM 114 CA SER 33 11.443 -3.416 3.384 1.00 0.00 C ATOM 115 C SER 33 9.967 -3.568 3.121 1.00 0.00 C ATOM 116 O SER 33 9.223 -4.075 3.954 1.00 0.00 O ATOM 117 N VAL 34 9.545 -3.169 1.922 1.00 0.00 N ATOM 118 CA VAL 34 8.143 -3.163 1.554 1.00 0.00 C ATOM 119 C VAL 34 8.002 -3.157 0.041 1.00 0.00 C ATOM 120 O VAL 34 8.896 -2.684 -0.670 1.00 0.00 O ATOM 121 N ASP 35 6.861 -3.651 -0.427 1.00 0.00 N ATOM 122 CA ASP 35 6.502 -3.633 -1.844 1.00 0.00 C ATOM 123 C ASP 35 4.996 -3.463 -1.927 1.00 0.00 C ATOM 124 O ASP 35 4.269 -4.154 -1.212 1.00 0.00 O ATOM 125 N TRP 36 4.534 -2.590 -2.822 1.00 0.00 N ATOM 126 CA TRP 36 3.107 -2.357 -2.995 1.00 0.00 C ATOM 127 C TRP 36 2.725 -2.525 -4.457 1.00 0.00 C ATOM 128 O TRP 36 3.442 -2.058 -5.347 1.00 0.00 O ATOM 129 N ASN 37 1.541 -3.091 -4.655 1.00 0.00 N ATOM 130 CA ASN 37 1.001 -3.371 -5.962 1.00 0.00 C ATOM 131 C ASN 37 -0.457 -2.935 -6.049 1.00 0.00 C ATOM 132 O ASN 37 -1.123 -2.685 -5.045 1.00 0.00 O ATOM 133 N ALA 38 -0.967 -2.883 -7.273 1.00 0.00 N ATOM 134 CA ALA 38 -2.336 -2.455 -7.502 1.00 0.00 C ATOM 135 C ALA 38 -2.833 -2.974 -8.838 1.00 0.00 C ATOM 136 O ALA 38 -2.060 -3.287 -9.746 1.00 0.00 O ATOM 137 N ILE 39 -4.146 -3.038 -8.946 1.00 0.00 N ATOM 138 CA ILE 39 -4.812 -3.512 -10.154 1.00 0.00 C ATOM 139 CA ILE 39 -4.786 -3.528 -10.157 1.00 0.00 C ATOM 140 C ILE 39 -4.961 -2.463 -11.232 1.00 0.00 C ATOM 141 O ILE 39 -4.810 -2.764 -12.410 1.00 0.00 O ATOM 142 N ASN 40 -5.308 -1.245 -10.837 1.00 0.00 N ATOM 143 CA ASN 40 -5.640 -0.221 -11.816 1.00 0.00 C ATOM 144 C ASN 40 -5.500 1.211 -11.376 1.00 0.00 C ATOM 145 O ASN 40 -6.247 2.075 -11.847 1.00 0.00 O ATOM 146 N LYS 41 -4.538 1.477 -10.493 1.00 0.00 N ATOM 147 CA LYS 41 -4.298 2.866 -10.088 1.00 0.00 C ATOM 148 C LYS 41 -3.624 3.647 -11.223 1.00 0.00 C ATOM 149 O LYS 41 -3.035 3.074 -12.136 1.00 0.00 O ATOM 150 N ASP 42 -3.714 4.960 -11.141 1.00 0.00 N ATOM 151 CA ASP 42 -3.340 5.825 -12.262 1.00 0.00 C ATOM 152 C ASP 42 -1.856 6.148 -12.325 1.00 0.00 C ATOM 153 O ASP 42 -1.294 6.634 -11.358 1.00 0.00 O ATOM 154 N GLY 43 -1.228 5.913 -13.494 1.00 0.00 N ATOM 155 CA GLY 43 0.179 6.307 -13.691 1.00 0.00 C ATOM 156 C GLY 43 0.429 7.752 -13.295 1.00 0.00 C ATOM 157 O GLY 43 -0.320 8.661 -13.693 1.00 0.00 O ATOM 158 N GLY 44 1.469 7.951 -12.493 1.00 0.00 N ATOM 159 CA GLY 44 1.838 9.279 -12.038 1.00 0.00 C ATOM 160 C GLY 44 1.116 9.776 -10.805 1.00 0.00 C ATOM 161 O GLY 44 1.518 10.796 -10.243 1.00 0.00 O ATOM 162 N ASP 45 0.066 9.054 -10.393 1.00 0.00 N ATOM 163 CA ASP 45 -0.741 9.421 -9.237 1.00 0.00 C ATOM 164 C ASP 45 -0.775 8.198 -8.323 1.00 0.00 C ATOM 165 O ASP 45 0.270 7.812 -7.802 1.00 0.00 O ATOM 166 N ASP 46 -1.920 7.549 -8.148 1.00 0.00 N ATOM 167 CA ASP 46 -1.970 6.400 -7.246 1.00 0.00 C ATOM 168 C ASP 46 -1.002 5.274 -7.567 1.00 0.00 C ATOM 169 O ASP 46 -0.562 4.575 -6.661 1.00 0.00 O ATOM 170 N LYS 47 -0.656 5.093 -8.840 1.00 0.00 N ATOM 171 CA LYS 47 0.258 4.017 -9.222 1.00 0.00 C ATOM 172 C LYS 47 1.676 4.207 -8.680 1.00 0.00 C ATOM 173 O LYS 47 2.468 3.265 -8.686 1.00 0.00 O ATOM 174 N ASP 48 1.989 5.410 -8.198 1.00 0.00 N ATOM 175 CA ASP 48 3.314 5.690 -7.654 1.00 0.00 C ATOM 176 C ASP 48 3.615 4.904 -6.384 1.00 0.00 C ATOM 177 O ASP 48 4.773 4.842 -5.980 1.00 0.00 O ATOM 178 N THR 49 2.613 4.275 -5.779 1.00 0.00 N ATOM 179 CA THR 49 2.883 3.444 -4.608 1.00 0.00 C ATOM 180 C THR 49 3.806 2.269 -4.930 1.00 0.00 C ATOM 181 O THR 49 4.428 1.715 -4.040 1.00 0.00 O ATOM 182 N LEU 50 3.845 1.863 -6.197 1.00 0.00 N ATOM 183 CA LEU 50 4.672 0.742 -6.624 1.00 0.00 C ATOM 184 C LEU 50 6.131 1.096 -6.881 1.00 0.00 C ATOM 185 O LEU 50 6.910 0.226 -7.241 1.00 0.00 O ATOM 186 N SER 51 6.512 2.339 -6.642 1.00 0.00 N ATOM 187 CA SER 51 7.865 2.811 -6.899 1.00 0.00 C ATOM 188 CA SER 51 7.870 2.791 -6.899 1.00 0.00 C ATOM 189 C SER 51 8.687 2.865 -5.619 1.00 0.00 C ATOM 190 O SER 51 8.162 3.166 -4.537 1.00 0.00 O ATOM 191 N ARG 52 10.007 2.638 -5.725 1.00 0.00 N ATOM 192 CA ARG 52 10.861 2.701 -4.532 1.00 0.00 C ATOM 193 C ARG 52 10.830 4.040 -3.807 1.00 0.00 C ATOM 194 O ARG 52 11.010 4.067 -2.585 1.00 0.00 O ATOM 195 N ASN 53 10.629 5.152 -4.505 1.00 0.00 N ATOM 196 CA ASN 53 10.594 6.436 -3.801 1.00 0.00 C ATOM 197 CA ASN 53 10.550 6.455 -3.829 1.00 0.00 C ATOM 198 C ASN 53 9.513 6.406 -2.711 1.00 0.00 C ATOM 199 O ASN 53 9.677 7.028 -1.657 1.00 0.00 O ATOM 200 N GLY 54 8.426 5.671 -2.940 1.00 0.00 N ATOM 201 CA GLY 54 7.397 5.530 -1.930 1.00 0.00 C ATOM 202 C GLY 54 7.732 4.452 -0.891 1.00 0.00 C ATOM 203 O GLY 54 7.728 4.704 0.310 1.00 0.00 O ATOM 204 N GLY 55 8.056 3.256 -1.360 1.00 0.00 N ATOM 205 CA GLY 55 8.220 2.134 -0.432 1.00 0.00 C ATOM 206 C GLY 55 9.470 2.230 0.440 1.00 0.00 C ATOM 207 O GLY 55 9.469 1.750 1.570 1.00 0.00 O ATOM 208 N TYR 56 10.527 2.868 -0.065 1.00 0.00 N ATOM 209 CA TYR 56 11.763 2.958 0.709 1.00 0.00 C ATOM 210 C TYR 56 11.589 3.718 2.009 1.00 0.00 C ATOM 211 O TYR 56 12.339 3.484 2.958 1.00 0.00 O ATOM 212 N LYS 57 10.604 4.609 2.084 1.00 0.00 N ATOM 213 CA LYS 57 10.372 5.409 3.275 1.00 0.00 C ATOM 214 CA LYS 57 10.449 5.405 3.298 1.00 0.00 C ATOM 215 C LYS 57 9.950 4.579 4.480 1.00 0.00 C ATOM 216 O LYS 57 10.083 5.028 5.628 1.00 0.00 O ATOM 217 N MET 58 9.410 3.379 4.237 1.00 0.00 N ATOM 218 CA MET 58 8.980 2.529 5.342 1.00 0.00 C ATOM 219 C MET 58 10.139 1.897 6.102 1.00 0.00 C ATOM 220 O MET 58 9.990 1.508 7.253 1.00 0.00 O ATOM 221 N VAL 59 11.299 1.789 5.471 1.00 0.00 N ATOM 222 CA VAL 59 12.443 1.153 6.104 1.00 0.00 C ATOM 223 C VAL 59 12.809 1.870 7.392 1.00 0.00 C ATOM 224 O VAL 59 12.966 3.084 7.401 1.00 0.00 O ATOM 225 N GLU 60 12.939 1.110 8.470 1.00 0.00 N ATOM 226 CA GLU 60 13.315 1.670 9.756 1.00 0.00 C ATOM 227 C GLU 60 12.157 2.148 10.607 1.00 0.00 C ATOM 228 O GLU 60 12.340 2.453 11.773 1.00 0.00 O ATOM 229 N TYR 61 10.962 2.246 10.023 1.00 0.00 N ATOM 230 CA TYR 61 9.784 2.639 10.786 1.00 0.00 C ATOM 231 CA TYR 61 9.761 2.625 10.767 1.00 0.00 C ATOM 232 C TYR 61 9.300 1.439 11.605 1.00 0.00 C ATOM 233 O TYR 61 9.572 0.295 11.253 1.00 0.00 O ATOM 234 N GLY 62 8.599 1.720 12.696 1.00 0.00 N ATOM 235 CA GLY 62 8.134 0.702 13.619 1.00 0.00 C ATOM 236 C GLY 62 6.616 0.608 13.620 1.00 0.00 C ATOM 237 O GLY 62 5.911 1.612 13.583 1.00 0.00 O ATOM 238 N GLY 63 6.127 -0.625 13.707 1.00 0.00 N ATOM 239 CA GLY 63 4.694 -0.919 13.731 1.00 0.00 C ATOM 240 CA GLY 63 4.681 -0.791 13.697 1.00 0.00 C ATOM 241 CA GLY 63 4.703 -0.952 13.745 1.00 0.00 C ATOM 242 C GLY 63 4.083 -0.728 15.120 1.00 0.00 C ATOM 243 O GLY 63 2.890 -0.417 15.242 1.00 0.00 O ATOM 244 N ALA 64 0.739 0.655 13.600 1.00 0.00 N ATOM 245 CA ALA 64 1.021 0.677 12.163 1.00 0.00 C ATOM 246 C ALA 64 1.684 2.033 11.806 1.00 0.00 C ATOM 247 O ALA 64 1.905 2.892 12.669 1.00 0.00 O ATOM 248 N GLN 65 1.990 2.196 10.529 1.00 0.00 N ATOM 249 CA GLN 65 2.677 3.376 10.014 1.00 0.00 C ATOM 250 C GLN 65 1.682 4.215 9.227 1.00 0.00 C ATOM 251 O GLN 65 1.013 3.721 8.321 1.00 0.00 O ATOM 252 N ALA 66 1.578 5.491 9.597 1.00 0.00 N ATOM 253 CA ALA 66 0.665 6.410 8.912 1.00 0.00 C ATOM 254 C ALA 66 1.222 6.872 7.579 1.00 0.00 C ATOM 255 O ALA 66 2.432 6.959 7.403 1.00 0.00 O ATOM 256 N VAL 80 0.898 10.224 5.408 1.00 0.00 N ATOM 257 CA VAL 80 0.438 11.601 5.592 1.00 0.00 C ATOM 258 C VAL 80 0.510 12.411 4.309 1.00 0.00 C ATOM 259 O VAL 80 1.113 11.994 3.330 1.00 0.00 O ATOM 260 N GLU 81 -0.143 13.567 4.304 1.00 0.00 N ATOM 261 CA GLU 81 -0.015 14.466 3.169 1.00 0.00 C ATOM 262 C GLU 81 1.444 14.911 3.149 1.00 0.00 C ATOM 263 O GLU 81 2.018 15.159 4.204 1.00 0.00 O ATOM 264 N LYS 82 2.066 14.935 1.953 1.00 0.00 N ATOM 265 N LYS 82 2.055 15.070 1.964 1.00 0.00 N ATOM 266 CA LYS 82 3.498 15.219 1.810 1.00 0.00 C ATOM 267 CA LYS 82 3.406 15.608 2.106 1.00 0.00 C ATOM 268 C LYS 82 4.013 16.390 2.657 1.00 0.00 C ATOM 269 C LYS 82 3.369 16.961 2.828 1.00 0.00 C ATOM 270 O LYS 82 3.446 17.479 2.628 1.00 0.00 O ATOM 271 O LYS 82 2.497 17.791 2.558 1.00 0.00 O ATOM 272 N GLN 83 5.074 16.152 3.417 1.00 0.00 N ATOM 273 N GLN 83 4.279 17.151 3.776 1.00 0.00 N ATOM 274 CA GLN 83 5.663 17.193 4.252 1.00 0.00 C ATOM 275 CA GLN 83 4.329 18.377 4.558 1.00 0.00 C ATOM 276 C GLN 83 5.086 17.315 5.653 1.00 0.00 C ATOM 277 C GLN 83 3.738 18.195 5.943 1.00 0.00 C ATOM 278 O GLN 83 5.605 18.077 6.473 1.00 0.00 O ATOM 279 O GLN 83 4.035 18.963 6.858 1.00 0.00 O ATOM 280 N LYS 89 4.010 16.590 5.946 1.00 0.00 N ATOM 281 N LYS 89 2.902 17.174 6.102 1.00 0.00 N ATOM 282 CA LYS 89 3.380 16.682 7.268 1.00 0.00 C ATOM 283 CA LYS 89 2.283 16.901 7.393 1.00 0.00 C ATOM 284 C LYS 89 3.947 15.660 8.252 1.00 0.00 C ATOM 285 C LYS 89 3.091 15.864 8.172 1.00 0.00 C ATOM 286 O LYS 89 4.857 14.897 7.920 1.00 0.00 O ATOM 287 O LYS 89 4.026 15.270 7.660 1.00 0.00 O ATOM 288 N TYR 90 3.430 15.688 9.477 1.00 0.00 N ATOM 289 N TYR 90 2.723 15.648 9.423 1.00 0.00 N ATOM 290 CA TYR 90 3.863 14.760 10.509 1.00 0.00 C ATOM 291 CA TYR 90 3.442 14.700 10.256 1.00 0.00 C ATOM 292 C TYR 90 2.759 14.419 11.510 1.00 0.00 C ATOM 293 C TYR 90 2.489 14.186 11.299 1.00 0.00 C ATOM 294 O TYR 90 1.809 15.174 11.710 1.00 0.00 O ATOM 295 O TYR 90 1.333 14.588 11.306 1.00 0.00 O ATOM 296 N LYS 91 2.948 13.271 12.148 1.00 0.00 N ATOM 297 CA LYS 91 2.107 12.725 13.204 1.00 0.00 C ATOM 298 CA LYS 91 2.106 12.831 13.243 1.00 0.00 C ATOM 299 C LYS 91 2.999 12.517 14.427 1.00 0.00 C ATOM 300 O LYS 91 4.038 11.879 14.298 1.00 0.00 O ATOM 301 N ASP 92 2.612 13.038 15.586 1.00 0.00 N ATOM 302 CA ASP 92 3.357 12.805 16.807 1.00 0.00 C ATOM 303 C ASP 92 2.866 11.506 17.429 1.00 0.00 C ATOM 304 O ASP 92 1.666 11.234 17.477 1.00 0.00 O ATOM 305 N ASN 93 3.800 10.671 17.878 1.00 0.00 N ATOM 306 CA ASN 93 3.434 9.444 18.596 1.00 0.00 C ATOM 307 C ASN 93 3.215 8.212 17.738 1.00 0.00 C ATOM 308 O ASN 93 2.829 7.170 18.258 1.00 0.00 O ATOM 309 N ASP 94 3.429 8.328 16.437 1.00 0.00 N ATOM 310 CA ASP 94 3.274 7.238 15.498 1.00 0.00 C ATOM 311 C ASP 94 4.253 7.467 14.361 1.00 0.00 C ATOM 312 O ASP 94 4.442 8.612 13.952 1.00 0.00 O ATOM 313 N GLY 95 4.894 6.417 13.847 1.00 0.00 N ATOM 314 CA GLY 95 5.753 6.581 12.675 1.00 0.00 C ATOM 315 CA GLY 95 5.756 6.589 12.689 1.00 0.00 C ATOM 316 C GLY 95 4.891 6.843 11.445 1.00 0.00 C ATOM 317 O GLY 95 3.737 6.415 11.375 1.00 0.00 O ATOM 318 N HIS 96 5.462 7.547 10.478 1.00 0.00 N ATOM 319 CA HIS 96 4.716 7.939 9.302 1.00 0.00 C ATOM 320 C HIS 96 5.647 8.122 8.119 1.00 0.00 C ATOM 321 O HIS 96 6.861 8.297 8.268 1.00 0.00 O ATOM 322 N THR 97 5.048 8.061 6.929 1.00 0.00 N ATOM 323 CA THR 97 5.738 8.340 5.683 1.00 0.00 C ATOM 324 C THR 97 4.866 9.270 4.868 1.00 0.00 C ATOM 325 O THR 97 3.654 9.353 5.065 1.00 0.00 O ATOM 326 N ASP 98 5.474 9.940 3.899 1.00 0.00 N ATOM 327 CA ASP 98 4.713 10.762 2.970 1.00 0.00 C ATOM 328 C ASP 98 3.905 9.937 1.978 1.00 0.00 C ATOM 329 O ASP 98 4.376 8.934 1.425 1.00 0.00 O ATOM 330 N ALA 99 2.694 10.401 1.726 1.00 0.00 N ATOM 331 CA ALA 99 1.879 9.871 0.647 1.00 0.00 C ATOM 332 C ALA 99 2.270 10.481 -0.696 1.00 0.00 C ATOM 333 O ALA 99 3.285 11.161 -0.842 1.00 0.00 O ATOM 334 N ILE 100 1.425 10.230 -1.677 1.00 0.00 N ATOM 335 CA ILE 100 1.651 10.651 -3.049 1.00 0.00 C ATOM 336 CA ILE 100 1.654 10.667 -3.042 1.00 0.00 C ATOM 337 C ILE 100 0.895 11.936 -3.343 1.00 0.00 C ATOM 338 O ILE 100 -0.303 12.010 -3.135 1.00 0.00 O ATOM 339 N SER 101 1.600 12.942 -3.842 1.00 0.00 N ATOM 340 CA SER 101 0.981 14.187 -4.270 1.00 0.00 C ATOM 341 CA SER 101 0.953 14.188 -4.242 1.00 0.00 C ATOM 342 CA SER 101 0.963 14.187 -4.263 1.00 0.00 C ATOM 343 C SER 101 -0.054 13.894 -5.359 1.00 0.00 C ATOM 344 O SER 101 0.267 13.271 -6.373 1.00 0.00 O ATOM 345 N GLY 102 -1.294 14.313 -5.147 1.00 0.00 N ATOM 346 CA GLY 102 -2.344 14.058 -6.111 1.00 0.00 C ATOM 347 C GLY 102 -2.877 12.639 -6.053 1.00 0.00 C ATOM 348 O GLY 102 -3.705 12.276 -6.887 1.00 0.00 O ATOM 349 N ALA 103 -2.410 11.853 -5.077 1.00 0.00 N ATOM 350 CA ALA 103 -2.832 10.465 -4.889 1.00 0.00 C ATOM 351 C ALA 103 -3.333 10.216 -3.492 1.00 0.00 C ATOM 352 O ALA 103 -3.026 9.191 -2.874 1.00 0.00 O ATOM 353 N THR 104 -4.120 11.132 -2.964 1.00 0.00 N ATOM 354 N THR 104 -4.154 11.149 -3.009 1.00 0.00 N ATOM 355 CA THR 104 -4.504 11.019 -1.559 1.00 0.00 C ATOM 356 CA THR 104 -4.696 11.117 -1.646 1.00 0.00 C ATOM 357 C THR 104 -5.432 9.816 -1.246 1.00 0.00 C ATOM 358 C THR 104 -5.402 9.818 -1.300 1.00 0.00 C ATOM 359 O THR 104 -5.258 9.183 -0.204 1.00 0.00 O ATOM 360 O THR 104 -5.060 9.141 -0.329 1.00 0.00 O ATOM 361 N ILE 105 -6.394 9.481 -2.112 1.00 0.00 N ATOM 362 CA ILE 105 -7.247 8.327 -1.820 1.00 0.00 C ATOM 363 CA ILE 105 -7.234 8.303 -1.873 1.00 0.00 C ATOM 364 C ILE 105 -6.411 7.026 -1.852 1.00 0.00 C ATOM 365 O ILE 105 -6.578 6.172 -0.981 1.00 0.00 O ATOM 366 N LYS 106 -5.510 6.884 -2.823 1.00 0.00 N ATOM 367 CA LYS 106 -4.679 5.695 -2.873 1.00 0.00 C ATOM 368 C LYS 106 -3.757 5.625 -1.637 1.00 0.00 C ATOM 369 O LYS 106 -3.553 4.549 -1.057 1.00 0.00 O ATOM 370 N VAL 107 -3.185 6.771 -1.266 1.00 0.00 N ATOM 371 CA VAL 107 -2.293 6.863 -0.101 1.00 0.00 C ATOM 372 C VAL 107 -3.018 6.452 1.182 1.00 0.00 C ATOM 373 O VAL 107 -2.480 5.725 2.007 1.00 0.00 O ATOM 374 N LYS 108 -4.233 6.959 1.353 1.00 0.00 N ATOM 375 CA LYS 108 -5.116 6.576 2.460 1.00 0.00 C ATOM 376 CA LYS 108 -5.067 6.590 2.479 1.00 0.00 C ATOM 377 C LYS 108 -5.399 5.080 2.409 1.00 0.00 C ATOM 378 O LYS 108 -5.445 4.399 3.427 1.00 0.00 O ATOM 379 N LYS 109 -5.618 4.566 1.208 1.00 0.00 N ATOM 380 CA LYS 109 -5.847 3.146 1.025 1.00 0.00 C ATOM 381 C LYS 109 -4.654 2.316 1.479 1.00 0.00 C ATOM 382 O LYS 109 -4.830 1.239 2.042 1.00 0.00 O ATOM 383 N PHE 110 -3.440 2.800 1.244 1.00 0.00 N ATOM 384 CA PHE 110 -2.240 2.115 1.741 1.00 0.00 C ATOM 385 C PHE 110 -2.193 2.156 3.268 1.00 0.00 C ATOM 386 O PHE 110 -1.922 1.149 3.919 1.00 0.00 O ATOM 387 N PHE 111 -2.449 3.330 3.849 1.00 0.00 N ATOM 388 CA PHE 111 -2.467 3.474 5.304 1.00 0.00 C ATOM 389 C PHE 111 -3.456 2.462 5.920 1.00 0.00 C ATOM 390 O PHE 111 -3.138 1.712 6.869 1.00 0.00 O ATOM 391 N ASP 112 -4.665 2.433 5.382 1.00 0.00 N ATOM 392 CA ASP 112 -5.701 1.533 5.872 1.00 0.00 C ATOM 393 C ASP 112 -5.330 0.073 5.636 1.00 0.00 C ATOM 394 O ASP 112 -5.554 -0.771 6.499 1.00 0.00 O ATOM 395 N LEU 113 -4.772 -0.221 4.464 1.00 0.00 N ATOM 396 CA LEU 113 -4.329 -1.573 4.132 1.00 0.00 C ATOM 397 C LEU 113 -3.300 -2.070 5.131 1.00 0.00 C ATOM 398 O LEU 113 -3.363 -3.217 5.583 1.00 0.00 O ATOM 399 N ALA 114 -2.328 -1.231 5.462 1.00 0.00 N ATOM 400 CA ALA 114 -1.311 -1.617 6.424 1.00 0.00 C ATOM 401 C ALA 114 -1.942 -1.907 7.784 1.00 0.00 C ATOM 402 O ALA 114 -1.673 -2.944 8.395 1.00 0.00 O ATOM 403 N GLN 115 -2.759 -0.987 8.265 1.00 0.00 N ATOM 404 CA GLN 115 -3.351 -1.193 9.582 1.00 0.00 C ATOM 405 C GLN 115 -4.221 -2.438 9.624 1.00 0.00 C ATOM 406 O GLN 115 -4.114 -3.269 10.526 1.00 0.00 O ATOM 407 N LYS 116 -5.122 -2.555 8.647 1.00 0.00 N ATOM 408 CA LYS 116 -6.077 -3.666 8.646 1.00 0.00 C ATOM 409 C LYS 116 -5.395 -5.007 8.398 1.00 0.00 C ATOM 410 O LYS 116 -5.732 -6.005 9.024 1.00 0.00 O ATOM 411 N ALA 117 -4.409 -5.016 7.517 1.00 0.00 N ATOM 412 CA ALA 117 -3.723 -6.272 7.204 1.00 0.00 C ATOM 413 C ALA 117 -2.815 -6.699 8.357 1.00 0.00 C ATOM 414 O ALA 117 -2.806 -7.866 8.774 1.00 0.00 O ATOM 415 N LEU 118 -2.030 -5.760 8.874 1.00 0.00 N ATOM 416 CA LEU 118 -1.108 -6.087 9.960 1.00 0.00 C ATOM 417 C LEU 118 -1.848 -6.467 11.238 1.00 0.00 C ATOM 418 O LEU 118 -1.325 -7.241 12.047 1.00 0.00 O ATOM 419 N LYS 119 -3.075 -5.968 11.419 1.00 0.00 N ATOM 420 CA LYS 119 -3.864 -6.311 12.606 1.00 0.00 C ATOM 421 CA LYS 119 -3.875 -6.309 12.588 1.00 0.00 C ATOM 422 CA LYS 119 -3.845 -6.309 12.615 1.00 0.00 C ATOM 423 C LYS 119 -3.982 -7.827 12.744 1.00 0.00 C ATOM 424 O LYS 119 -3.935 -8.360 13.847 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 424 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 73.20 54.3 184 75.4 244 ARMSMC SECONDARY STRUCTURE . . 53.45 70.0 90 83.3 108 ARMSMC SURFACE . . . . . . . . 80.47 48.6 107 72.3 148 ARMSMC BURIED . . . . . . . . 61.68 62.3 77 80.2 96 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 100 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 92 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 48 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 63 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 37 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 81 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 70 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 36 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 54 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 27 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 34 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 30 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 16 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 18 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 10 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.81 (Number of atoms: 121) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.81 121 98.4 123 CRMSCA CRN = ALL/NP . . . . . 0.1058 CRMSCA SECONDARY STRUCTURE . . 8.40 53 98.1 54 CRMSCA SURFACE . . . . . . . . 14.74 76 101.3 75 CRMSCA BURIED . . . . . . . . 8.61 45 93.8 48 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.54 424 70.2 604 CRMSMC SECONDARY STRUCTURE . . 8.59 194 71.9 270 CRMSMC SURFACE . . . . . . . . 14.49 262 71.6 366 CRMSMC BURIED . . . . . . . . 8.48 162 68.1 238 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 1399 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 1349 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 687 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 834 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 565 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.54 424 22.4 1891 CRMSALL SECONDARY STRUCTURE . . 8.59 194 21.5 903 CRMSALL SURFACE . . . . . . . . 14.49 262 23.1 1134 CRMSALL BURIED . . . . . . . . 8.48 162 21.4 757 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.718 1.000 0.500 121 98.4 123 ERRCA SECONDARY STRUCTURE . . 7.333 1.000 0.500 53 98.1 54 ERRCA SURFACE . . . . . . . . 12.445 1.000 0.500 76 101.3 75 ERRCA BURIED . . . . . . . . 7.803 1.000 0.500 45 93.8 48 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.527 1.000 0.500 424 70.2 604 ERRMC SECONDARY STRUCTURE . . 7.434 1.000 0.500 194 71.9 270 ERRMC SURFACE . . . . . . . . 12.328 1.000 0.500 262 71.6 366 ERRMC BURIED . . . . . . . . 7.612 1.000 0.500 162 68.1 238 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 1399 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 1349 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 687 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 834 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 565 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.527 1.000 0.500 424 22.4 1891 ERRALL SECONDARY STRUCTURE . . 7.434 1.000 0.500 194 21.5 903 ERRALL SURFACE . . . . . . . . 12.328 1.000 0.500 262 23.1 1134 ERRALL BURIED . . . . . . . . 7.612 1.000 0.500 162 21.4 757 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 15 59 96 123 DISTCA CA (P) 0.00 0.00 0.81 12.20 47.97 123 DISTCA CA (RMS) 0.00 0.00 2.40 4.05 6.09 DISTCA ALL (N) 0 2 7 56 238 384 1891 DISTALL ALL (P) 0.00 0.11 0.37 2.96 12.59 1891 DISTALL ALL (RMS) 0.00 1.76 2.39 3.96 6.16 DISTALL END of the results output