####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 64 ( 493), selected 64 , name T0560TS457_1-D1 # Molecule2: number of CA atoms 64 ( 1008), selected 64 , name T0560-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0560TS457_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 64 3 - 66 1.57 1.57 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 64 3 - 66 1.57 1.57 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 22 - 53 0.98 2.11 LCS_AVERAGE: 41.70 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 64 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 3 K 3 18 64 64 4 17 39 51 59 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT K 4 K 4 18 64 64 4 23 43 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT I 5 I 5 18 64 64 4 18 40 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT V 6 V 6 18 64 64 9 25 44 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT G 7 G 7 18 64 64 3 19 43 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT A 8 A 8 18 64 64 4 17 43 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT N 9 N 9 31 64 64 12 30 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT A 10 A 10 31 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT G 11 G 11 31 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT K 12 K 12 31 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT V 13 V 13 31 64 64 6 28 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT W 14 W 14 31 64 64 6 28 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT H 15 H 15 31 64 64 11 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT A 16 A 16 31 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT L 17 L 17 31 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT N 18 N 18 31 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT E 19 E 19 31 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT A 20 A 20 31 64 64 8 30 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT D 21 D 21 31 64 64 3 3 3 3 58 61 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT G 22 G 22 32 64 64 5 20 46 51 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT I 23 I 23 32 64 64 5 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT S 24 S 24 32 64 64 7 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT I 25 I 25 32 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT P 26 P 26 32 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT E 27 E 27 32 64 64 5 22 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT L 28 L 28 32 64 64 5 18 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT A 29 A 29 32 64 64 9 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT R 30 R 30 32 64 64 9 28 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT K 31 K 31 32 64 64 9 24 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT V 32 V 32 32 64 64 9 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT N 33 N 33 32 64 64 10 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT L 34 L 34 32 64 64 10 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT S 35 S 35 32 64 64 10 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT V 36 V 36 32 64 64 10 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT E 37 E 37 32 64 64 10 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT S 38 S 38 32 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT T 39 T 39 32 64 64 8 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT A 40 A 40 32 64 64 9 29 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT L 41 L 41 32 64 64 11 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT A 42 A 42 32 64 64 6 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT V 43 V 43 32 64 64 6 15 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT G 44 G 44 32 64 64 6 25 48 51 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT W 45 W 45 32 64 64 5 25 48 51 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT L 46 L 46 32 64 64 9 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT A 47 A 47 32 64 64 5 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT R 48 R 48 32 64 64 5 20 48 51 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT E 49 E 49 32 64 64 3 15 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT N 50 N 50 32 64 64 13 28 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT K 51 K 51 32 64 64 4 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT V 52 V 52 32 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT V 53 V 53 32 64 64 4 29 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT I 54 I 54 14 64 64 4 10 26 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT E 55 E 55 14 64 64 4 13 42 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT R 56 R 56 14 64 64 4 11 23 44 59 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT K 57 K 57 14 64 64 4 10 31 41 59 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT N 58 N 58 14 64 64 4 11 23 51 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT G 59 G 59 14 64 64 4 12 26 46 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT L 60 L 60 14 64 64 4 26 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT I 61 I 61 14 64 64 4 21 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT E 62 E 62 14 64 64 12 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT I 63 I 63 14 64 64 6 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT Y 64 Y 64 13 64 64 8 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT N 65 N 65 13 64 64 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_GDT E 66 E 66 7 64 64 3 7 17 41 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 LCS_AVERAGE LCS_A: 80.57 ( 41.70 100.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 13 31 48 52 60 63 64 64 64 64 64 64 64 64 64 64 64 64 64 64 GDT PERCENT_AT 20.31 48.44 75.00 81.25 93.75 98.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.34 0.73 0.99 1.17 1.43 1.53 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 GDT RMS_ALL_AT 1.83 1.76 1.82 1.62 1.59 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 1.57 # Checking swapping # possible swapping detected: D 21 D 21 # possible swapping detected: E 49 E 49 # possible swapping detected: E 55 E 55 # possible swapping detected: Y 64 Y 64 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA K 3 K 3 2.163 0 0.064 1.165 6.148 66.905 52.857 LGA K 4 K 4 1.731 0 0.030 0.900 5.064 75.000 53.968 LGA I 5 I 5 1.826 0 0.128 0.208 3.705 79.405 67.560 LGA V 6 V 6 1.154 0 0.038 1.248 2.787 83.690 75.646 LGA G 7 G 7 1.648 0 0.032 0.032 1.819 72.857 72.857 LGA A 8 A 8 1.709 0 0.085 0.094 1.846 75.000 74.571 LGA N 9 N 9 0.890 0 0.161 1.198 3.885 90.476 80.119 LGA A 10 A 10 0.242 0 0.044 0.044 0.416 100.000 100.000 LGA G 11 G 11 0.169 0 0.046 0.046 0.341 100.000 100.000 LGA K 12 K 12 0.467 0 0.029 0.841 1.785 95.238 88.624 LGA V 13 V 13 1.152 0 0.023 1.176 4.192 83.690 75.170 LGA W 14 W 14 1.209 0 0.028 1.200 6.858 81.429 56.701 LGA H 15 H 15 0.577 0 0.086 0.376 1.556 95.238 88.857 LGA A 16 A 16 0.554 0 0.182 0.184 1.568 86.071 86.952 LGA L 17 L 17 0.710 0 0.050 0.129 1.213 90.476 89.345 LGA N 18 N 18 0.715 0 0.040 1.401 4.011 90.476 74.702 LGA E 19 E 19 0.960 0 0.147 0.762 4.989 90.476 65.185 LGA A 20 A 20 1.360 0 0.108 0.124 2.433 75.119 74.667 LGA D 21 D 21 3.362 0 0.404 1.279 7.270 59.167 40.714 LGA G 22 G 22 2.433 0 0.517 0.517 3.019 59.167 59.167 LGA I 23 I 23 1.322 0 0.065 1.147 3.378 79.286 70.417 LGA S 24 S 24 1.072 0 0.061 0.567 2.619 85.952 80.397 LGA I 25 I 25 0.768 0 0.070 0.626 2.805 90.476 82.917 LGA P 26 P 26 1.424 0 0.090 0.352 2.214 81.429 76.599 LGA E 27 E 27 1.368 0 0.046 0.342 3.994 79.286 66.455 LGA L 28 L 28 1.468 0 0.020 0.092 1.880 79.286 76.071 LGA A 29 A 29 1.242 0 0.171 0.178 1.259 81.429 81.429 LGA R 30 R 30 1.583 0 0.085 1.324 5.339 72.857 69.091 LGA K 31 K 31 1.474 0 0.066 0.865 1.846 81.429 79.524 LGA V 32 V 32 1.151 0 0.071 1.205 3.100 85.952 79.524 LGA N 33 N 33 0.874 0 0.034 0.545 1.334 88.214 87.083 LGA L 34 L 34 0.958 0 0.016 0.081 1.271 88.214 88.214 LGA S 35 S 35 0.959 0 0.042 0.683 2.807 90.476 83.413 LGA V 36 V 36 0.882 0 0.034 0.066 1.162 90.476 86.599 LGA E 37 E 37 0.695 0 0.039 0.334 1.269 90.476 89.471 LGA S 38 S 38 0.825 0 0.041 0.689 2.541 90.476 84.921 LGA T 39 T 39 1.228 0 0.015 0.046 1.705 81.429 80.204 LGA A 40 A 40 1.240 0 0.029 0.027 1.320 81.429 81.429 LGA L 41 L 41 0.630 0 0.035 1.271 2.776 88.214 83.155 LGA A 42 A 42 1.653 0 0.027 0.026 2.203 72.976 72.952 LGA V 43 V 43 2.038 0 0.113 0.101 2.206 68.810 67.075 LGA G 44 G 44 2.261 0 0.043 0.043 2.261 64.762 64.762 LGA W 45 W 45 2.322 0 0.139 0.109 2.601 64.762 61.497 LGA L 46 L 46 1.182 0 0.020 0.139 1.516 83.810 84.881 LGA A 47 A 47 1.129 0 0.089 0.090 1.531 83.690 81.524 LGA R 48 R 48 2.414 0 0.065 0.269 5.757 70.833 44.286 LGA E 49 E 49 1.837 0 0.062 0.778 3.945 75.000 62.063 LGA N 50 N 50 1.057 0 0.590 1.236 5.712 81.786 64.167 LGA K 51 K 51 1.195 0 0.361 0.982 4.921 79.286 65.185 LGA V 52 V 52 0.857 0 0.124 1.147 2.741 92.976 80.952 LGA V 53 V 53 0.939 0 0.163 1.102 3.102 85.952 79.524 LGA I 54 I 54 2.017 0 0.074 0.708 3.210 64.881 60.179 LGA E 55 E 55 1.605 0 0.136 0.812 1.774 79.405 77.672 LGA R 56 R 56 2.766 0 0.036 0.695 3.982 51.905 48.874 LGA K 57 K 57 3.135 0 0.028 0.871 4.479 61.190 50.635 LGA N 58 N 58 2.412 0 0.121 0.991 4.555 64.881 57.976 LGA G 59 G 59 3.133 0 0.059 0.059 3.478 53.571 53.571 LGA L 60 L 60 1.367 0 0.028 0.138 2.477 79.286 77.202 LGA I 61 I 61 1.792 0 0.030 0.647 2.995 70.833 65.893 LGA E 62 E 62 1.223 0 0.226 0.488 2.604 79.286 77.778 LGA I 63 I 63 0.999 0 0.082 0.102 1.524 88.214 83.750 LGA Y 64 Y 64 1.276 0 0.054 1.050 9.454 85.952 47.540 LGA N 65 N 65 1.006 0 0.407 0.817 3.496 83.810 72.500 LGA E 66 E 66 2.546 0 0.605 0.826 6.180 53.810 41.746 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 64 256 256 100.00 493 493 100.00 64 SUMMARY(RMSD_GDC): 1.574 1.551 2.377 79.661 72.637 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 64 64 4.0 64 1.57 82.422 92.242 3.824 LGA_LOCAL RMSD: 1.574 Number of atoms: 64 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 1.574 Number of assigned atoms: 64 Std_ASGN_ATOMS RMSD: 1.574 Standard rmsd on all 64 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.127814 * X + -0.972145 * Y + -0.196461 * Z + -0.254024 Y_new = 0.388949 * X + -0.231349 * Y + 0.891738 * Z + 16.408010 Z_new = -0.912350 * X + 0.037563 * Y + 0.407684 * Z + 2.397695 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.888293 1.148988 0.091878 [DEG: 108.1912 65.8322 5.2642 ] ZXZ: -2.924744 1.150880 -1.529648 [DEG: -167.5755 65.9406 -87.6424 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0560TS457_1-D1 REMARK 2: T0560-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0560TS457_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 64 64 4.0 64 1.57 92.242 1.57 REMARK ---------------------------------------------------------- MOLECULE T0560TS457_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0560 REMARK MODEL 1 REMARK PARENT 1z05_A ATOM 32 N LYS 3 -1.857 15.031 4.882 1.00 0.50 N ATOM 33 CA LYS 3 -1.821 13.918 5.823 1.00 0.50 C ATOM 34 C LYS 3 -3.195 13.668 6.431 1.00 0.50 C ATOM 35 O LYS 3 -3.550 12.531 6.743 1.00 0.50 O ATOM 36 CB LYS 3 -0.803 14.189 6.933 1.00 0.50 C ATOM 37 CG LYS 3 -0.680 13.059 7.944 1.00 0.50 C ATOM 38 CD LYS 3 0.400 13.351 8.978 1.00 0.50 C ATOM 39 CE LYS 3 0.505 12.237 10.012 1.00 0.50 C ATOM 40 NZ LYS 3 1.564 12.519 11.022 1.00 0.50 N ATOM 54 N LYS 4 -3.965 14.738 6.602 1.00 0.50 N ATOM 55 CA LYS 4 -5.307 14.635 7.164 1.00 0.50 C ATOM 56 C LYS 4 -6.177 13.695 6.342 1.00 0.50 C ATOM 57 O LYS 4 -6.925 12.885 6.891 1.00 0.50 O ATOM 58 CB LYS 4 -5.963 16.017 7.238 1.00 0.50 C ATOM 59 CG LYS 4 -7.353 16.003 7.853 1.00 0.50 C ATOM 60 CD LYS 4 -7.926 17.411 7.965 1.00 0.50 C ATOM 61 CE LYS 4 -9.339 17.401 8.535 1.00 0.50 C ATOM 62 NZ LYS 4 -9.909 18.775 8.623 1.00 0.50 N ATOM 76 N ILE 5 -6.078 13.805 5.022 1.00 0.50 N ATOM 77 CA ILE 5 -6.837 12.948 4.120 1.00 0.50 C ATOM 78 C ILE 5 -6.363 11.503 4.205 1.00 0.50 C ATOM 79 O ILE 5 -7.148 10.571 4.025 1.00 0.50 O ATOM 80 CB ILE 5 -6.728 13.440 2.657 1.00 0.50 C ATOM 81 CG1 ILE 5 -7.438 14.788 2.496 1.00 0.50 C ATOM 82 CG2 ILE 5 -7.309 12.403 1.694 1.00 0.50 C ATOM 83 CD1 ILE 5 -7.159 15.473 1.167 1.00 0.50 C ATOM 95 N VAL 6 -5.077 11.322 4.479 1.00 0.50 N ATOM 96 CA VAL 6 -4.501 9.990 4.617 1.00 0.50 C ATOM 97 C VAL 6 -5.178 9.211 5.738 1.00 0.50 C ATOM 98 O VAL 6 -5.308 7.989 5.668 1.00 0.50 O ATOM 99 CB VAL 6 -2.981 10.061 4.886 1.00 0.50 C ATOM 100 CG1 VAL 6 -2.428 8.681 5.225 1.00 0.50 C ATOM 101 CG2 VAL 6 -2.254 10.637 3.676 1.00 0.50 C ATOM 111 N GLY 7 -5.604 9.925 6.774 1.00 0.50 N ATOM 112 CA GLY 7 -6.299 9.307 7.896 1.00 0.50 C ATOM 113 C GLY 7 -7.741 8.973 7.536 1.00 0.50 C ATOM 114 O GLY 7 -8.287 7.968 7.989 1.00 0.50 O ATOM 118 N ALA 8 -8.353 9.825 6.720 1.00 0.50 N ATOM 119 CA ALA 8 -9.728 9.612 6.283 1.00 0.50 C ATOM 120 C ALA 8 -9.861 8.310 5.503 1.00 0.50 C ATOM 121 O ALA 8 -10.856 7.596 5.636 1.00 0.50 O ATOM 122 CB ALA 8 -10.195 10.785 5.426 1.00 0.50 C ATOM 128 N ASN 9 -8.856 8.007 4.690 1.00 0.50 N ATOM 129 CA ASN 9 -8.807 6.739 3.971 1.00 0.50 C ATOM 130 C ASN 9 -8.440 5.592 4.904 1.00 0.50 C ATOM 131 O ASN 9 -9.126 4.571 4.947 1.00 0.50 O ATOM 132 CB ASN 9 -7.809 6.821 2.810 1.00 0.50 C ATOM 133 CG ASN 9 -8.289 7.729 1.694 1.00 0.50 C ATOM 134 OD1 ASN 9 -9.482 8.031 1.593 1.00 0.50 O ATOM 135 ND2 ASN 9 -7.369 8.171 0.846 1.00 0.50 N ATOM 142 N ALA 10 -7.353 5.766 5.648 1.00 0.50 N ATOM 143 CA ALA 10 -6.900 4.751 6.592 1.00 0.50 C ATOM 144 C ALA 10 -8.005 4.381 7.574 1.00 0.50 C ATOM 145 O ALA 10 -8.155 3.217 7.944 1.00 0.50 O ATOM 146 CB ALA 10 -5.672 5.247 7.350 1.00 0.50 C ATOM 152 N GLY 11 -8.775 5.378 7.994 1.00 0.50 N ATOM 153 CA GLY 11 -9.871 5.159 8.930 1.00 0.50 C ATOM 154 C GLY 11 -10.940 4.258 8.324 1.00 0.50 C ATOM 155 O GLY 11 -11.434 3.338 8.977 1.00 0.50 O ATOM 159 N LYS 12 -11.296 4.530 7.073 1.00 0.50 N ATOM 160 CA LYS 12 -12.307 3.744 6.376 1.00 0.50 C ATOM 161 C LYS 12 -11.938 2.266 6.355 1.00 0.50 C ATOM 162 O LYS 12 -12.770 1.404 6.640 1.00 0.50 O ATOM 163 CB LYS 12 -12.488 4.254 4.944 1.00 0.50 C ATOM 164 CG LYS 12 -13.154 5.620 4.858 1.00 0.50 C ATOM 165 CD LYS 12 -13.305 6.075 3.413 1.00 0.50 C ATOM 166 CE LYS 12 -13.948 7.453 3.321 1.00 0.50 C ATOM 167 NZ LYS 12 -14.064 7.915 1.908 1.00 0.50 N ATOM 181 N VAL 13 -10.686 1.979 6.015 1.00 0.50 N ATOM 182 CA VAL 13 -10.195 0.606 5.987 1.00 0.50 C ATOM 183 C VAL 13 -10.390 -0.076 7.336 1.00 0.50 C ATOM 184 O VAL 13 -10.767 -1.246 7.402 1.00 0.50 O ATOM 185 CB VAL 13 -8.702 0.552 5.596 1.00 0.50 C ATOM 186 CG1 VAL 13 -8.150 -0.860 5.762 1.00 0.50 C ATOM 187 CG2 VAL 13 -8.511 1.025 4.159 1.00 0.50 C ATOM 197 N TRP 14 -10.130 0.662 8.410 1.00 0.50 N ATOM 198 CA TRP 14 -10.276 0.130 9.758 1.00 0.50 C ATOM 199 C TRP 14 -11.731 -0.203 10.065 1.00 0.50 C ATOM 200 O TRP 14 -12.024 -1.197 10.729 1.00 0.50 O ATOM 201 CB TRP 14 -9.742 1.132 10.789 1.00 0.50 C ATOM 202 CG TRP 14 -8.250 1.300 10.761 1.00 0.50 C ATOM 203 CD1 TRP 14 -7.350 0.523 10.086 1.00 0.50 C ATOM 204 CD2 TRP 14 -7.491 2.308 11.436 1.00 0.50 C ATOM 205 NE1 TRP 14 -6.075 0.987 10.303 1.00 0.50 N ATOM 206 CE2 TRP 14 -6.132 2.080 11.125 1.00 0.50 C ATOM 207 CE3 TRP 14 -7.828 3.379 12.271 1.00 0.50 C ATOM 208 CZ2 TRP 14 -5.107 2.889 11.623 1.00 0.50 C ATOM 209 CZ3 TRP 14 -6.808 4.184 12.766 1.00 0.50 C ATOM 210 CH2 TRP 14 -5.465 3.933 12.441 1.00 0.50 H ATOM 221 N HIS 15 -12.639 0.637 9.579 1.00 0.50 N ATOM 222 CA HIS 15 -14.067 0.413 9.768 1.00 0.50 C ATOM 223 C HIS 15 -14.511 -0.891 9.116 1.00 0.50 C ATOM 224 O HIS 15 -15.075 -1.764 9.774 1.00 0.50 O ATOM 225 CB HIS 15 -14.873 1.583 9.187 1.00 0.50 C ATOM 226 CG HIS 15 -16.355 1.385 9.284 1.00 0.50 C ATOM 227 ND1 HIS 15 -17.052 1.520 10.465 1.00 0.50 N ATOM 228 CD2 HIS 15 -17.267 1.062 8.332 1.00 0.50 C ATOM 229 CE1 HIS 15 -18.335 1.288 10.234 1.00 0.50 C ATOM 230 NE2 HIS 15 -18.492 1.009 8.950 1.00 0.50 N ATOM 238 N ALA 16 -14.255 -1.015 7.819 1.00 0.50 N ATOM 239 CA ALA 16 -14.538 -2.250 7.096 1.00 0.50 C ATOM 240 C ALA 16 -14.001 -3.462 7.846 1.00 0.50 C ATOM 241 O ALA 16 -14.745 -4.392 8.154 1.00 0.50 O ATOM 242 CB ALA 16 -13.933 -2.192 5.697 1.00 0.50 C ATOM 248 N LEU 17 -12.704 -3.446 8.136 1.00 0.50 N ATOM 249 CA LEU 17 -12.057 -4.565 8.810 1.00 0.50 C ATOM 250 C LEU 17 -12.794 -4.938 10.089 1.00 0.50 C ATOM 251 O LEU 17 -12.957 -6.117 10.402 1.00 0.50 O ATOM 252 CB LEU 17 -10.600 -4.217 9.137 1.00 0.50 C ATOM 253 CG LEU 17 -9.645 -4.117 7.944 1.00 0.50 C ATOM 254 CD1 LEU 17 -8.293 -3.582 8.398 1.00 0.50 C ATOM 255 CD2 LEU 17 -9.483 -5.481 7.286 1.00 0.50 C ATOM 267 N ASN 18 -13.237 -3.926 10.829 1.00 0.50 N ATOM 268 CA ASN 18 -13.981 -4.147 12.062 1.00 0.50 C ATOM 269 C ASN 18 -15.174 -5.064 11.830 1.00 0.50 C ATOM 270 O ASN 18 -15.470 -5.934 12.649 1.00 0.50 O ATOM 271 CB ASN 18 -14.447 -2.812 12.652 1.00 0.50 C ATOM 272 CG ASN 18 -13.307 -2.016 13.262 1.00 0.50 C ATOM 273 OD1 ASN 18 -12.249 -2.570 13.577 1.00 0.50 O ATOM 274 ND2 ASN 18 -13.511 -0.717 13.435 1.00 0.50 N ATOM 281 N GLU 19 -15.857 -4.864 10.708 1.00 0.50 N ATOM 282 CA GLU 19 -17.003 -5.692 10.351 1.00 0.50 C ATOM 283 C GLU 19 -16.557 -7.009 9.728 1.00 0.50 C ATOM 284 O GLU 19 -16.403 -8.015 10.422 1.00 0.50 O ATOM 285 CB GLU 19 -17.922 -4.943 9.380 1.00 0.50 C ATOM 286 CG GLU 19 -18.588 -3.716 9.990 1.00 0.50 C ATOM 287 CD GLU 19 -19.441 -2.943 9.001 1.00 0.50 C ATOM 288 OE1 GLU 19 -19.485 -3.314 7.809 1.00 0.50 O ATOM 289 OE2 GLU 19 -20.070 -1.943 9.425 1.00 0.50 O ATOM 296 N ALA 20 -16.353 -6.998 8.415 1.00 0.50 N ATOM 297 CA ALA 20 -15.925 -8.192 7.696 1.00 0.50 C ATOM 298 C ALA 20 -14.632 -8.751 8.276 1.00 0.50 C ATOM 299 O ALA 20 -13.718 -8.000 8.615 1.00 0.50 O ATOM 300 CB ALA 20 -15.739 -7.876 6.215 1.00 0.50 C ATOM 306 N ASP 21 -14.563 -10.073 8.390 1.00 0.50 N ATOM 307 CA ASP 21 -13.382 -10.735 8.931 1.00 0.50 C ATOM 308 C ASP 21 -12.110 -10.216 8.271 1.00 0.50 C ATOM 309 O ASP 21 -11.386 -9.406 8.848 1.00 0.50 O ATOM 310 CB ASP 21 -13.488 -12.252 8.744 1.00 0.50 C ATOM 311 CG ASP 21 -14.507 -12.895 9.665 1.00 0.50 C ATOM 312 OD1 ASP 21 -14.995 -12.229 10.602 1.00 0.50 O ATOM 313 OD2 ASP 21 -14.821 -14.088 9.450 1.00 0.50 O ATOM 318 N GLY 22 -11.843 -10.691 7.058 1.00 0.50 N ATOM 319 CA GLY 22 -10.658 -10.276 6.318 1.00 0.50 C ATOM 320 C GLY 22 -10.973 -10.073 4.842 1.00 0.50 C ATOM 321 O GLY 22 -11.631 -10.906 4.218 1.00 0.50 O ATOM 325 N ILE 23 -10.502 -8.961 4.288 1.00 0.50 N ATOM 326 CA ILE 23 -10.734 -8.647 2.884 1.00 0.50 C ATOM 327 C ILE 23 -9.420 -8.464 2.136 1.00 0.50 C ATOM 328 O ILE 23 -8.363 -8.308 2.748 1.00 0.50 O ATOM 329 CB ILE 23 -11.594 -7.370 2.733 1.00 0.50 C ATOM 330 CG1 ILE 23 -10.883 -6.171 3.373 1.00 0.50 C ATOM 331 CG2 ILE 23 -12.978 -7.573 3.354 1.00 0.50 C ATOM 332 CD1 ILE 23 -11.556 -4.837 3.090 1.00 0.50 C ATOM 344 N SER 24 -9.492 -8.486 0.810 1.00 0.50 N ATOM 345 CA SER 24 -8.307 -8.324 -0.025 1.00 0.50 C ATOM 346 C SER 24 -8.173 -6.888 -0.516 1.00 0.50 C ATOM 347 O SER 24 -9.067 -6.067 -0.315 1.00 0.50 O ATOM 348 CB SER 24 -8.361 -9.278 -1.221 1.00 0.50 C ATOM 349 OG SER 24 -9.418 -8.918 -2.096 1.00 0.50 O ATOM 355 N ILE 25 -7.049 -6.591 -1.161 1.00 0.50 N ATOM 356 CA ILE 25 -6.796 -5.254 -1.683 1.00 0.50 C ATOM 357 C ILE 25 -7.911 -4.808 -2.622 1.00 0.50 C ATOM 358 O ILE 25 -8.388 -3.677 -2.542 1.00 0.50 O ATOM 359 CB ILE 25 -5.442 -5.192 -2.428 1.00 0.50 C ATOM 360 CG1 ILE 25 -4.283 -5.377 -1.441 1.00 0.50 C ATOM 361 CG2 ILE 25 -5.302 -3.871 -3.186 1.00 0.50 C ATOM 362 CD1 ILE 25 -2.936 -5.602 -2.111 1.00 0.50 C ATOM 374 N PRO 26 -8.321 -5.705 -3.512 1.00 0.50 N ATOM 375 CA PRO 26 -9.381 -5.406 -4.468 1.00 0.50 C ATOM 376 C PRO 26 -10.689 -5.086 -3.758 1.00 0.50 C ATOM 377 O PRO 26 -11.429 -4.193 -4.170 1.00 0.50 O ATOM 378 CB PRO 26 -9.481 -6.681 -5.308 1.00 0.50 C ATOM 379 CG PRO 26 -8.135 -7.324 -5.148 1.00 0.50 C ATOM 380 CD PRO 26 -7.718 -6.987 -3.733 1.00 0.50 C ATOM 388 N GLU 27 -10.972 -5.822 -2.688 1.00 0.50 N ATOM 389 CA GLU 27 -12.193 -5.618 -1.919 1.00 0.50 C ATOM 390 C GLU 27 -12.173 -4.278 -1.197 1.00 0.50 C ATOM 391 O GLU 27 -13.081 -3.462 -1.356 1.00 0.50 O ATOM 392 CB GLU 27 -12.382 -6.751 -0.905 1.00 0.50 C ATOM 393 CG GLU 27 -12.831 -8.066 -1.530 1.00 0.50 C ATOM 394 CD GLU 27 -14.184 -7.974 -2.211 1.00 0.50 C ATOM 395 OE1 GLU 27 -15.170 -7.562 -1.563 1.00 0.50 O ATOM 396 OE2 GLU 27 -14.262 -8.332 -3.413 1.00 0.50 O ATOM 403 N LEU 28 -11.132 -4.054 -0.401 1.00 0.50 N ATOM 404 CA LEU 28 -10.993 -2.812 0.348 1.00 0.50 C ATOM 405 C LEU 28 -11.080 -1.601 -0.571 1.00 0.50 C ATOM 406 O LEU 28 -11.707 -0.597 -0.235 1.00 0.50 O ATOM 407 CB LEU 28 -9.658 -2.793 1.102 1.00 0.50 C ATOM 408 CG LEU 28 -9.362 -1.536 1.924 1.00 0.50 C ATOM 409 CD1 LEU 28 -10.411 -1.364 3.015 1.00 0.50 C ATOM 410 CD2 LEU 28 -7.970 -1.626 2.535 1.00 0.50 C ATOM 422 N ALA 29 -10.445 -1.701 -1.735 1.00 0.50 N ATOM 423 CA ALA 29 -10.450 -0.614 -2.706 1.00 0.50 C ATOM 424 C ALA 29 -11.857 -0.344 -3.225 1.00 0.50 C ATOM 425 O ALA 29 -12.387 0.755 -3.066 1.00 0.50 O ATOM 426 CB ALA 29 -9.519 -0.943 -3.870 1.00 0.50 C ATOM 432 N ARG 30 -12.456 -1.354 -3.847 1.00 0.50 N ATOM 433 CA ARG 30 -13.813 -1.236 -4.368 1.00 0.50 C ATOM 434 C ARG 30 -14.802 -0.899 -3.259 1.00 0.50 C ATOM 435 O ARG 30 -15.593 0.036 -3.384 1.00 0.50 O ATOM 436 CB ARG 30 -14.236 -2.533 -5.062 1.00 0.50 C ATOM 437 CG ARG 30 -15.617 -2.464 -5.698 1.00 0.50 C ATOM 438 CD ARG 30 -15.998 -3.785 -6.351 1.00 0.50 C ATOM 439 NE ARG 30 -16.103 -4.862 -5.372 1.00 0.50 N ATOM 440 CZ ARG 30 -16.157 -6.159 -5.666 1.00 0.50 C ATOM 441 NH1 ARG 30 -15.927 -6.587 -6.904 1.00 0.50 H ATOM 442 NH2 ARG 30 -16.456 -7.038 -4.713 1.00 0.50 H ATOM 456 N LYS 31 -14.752 -1.666 -2.176 1.00 0.50 N ATOM 457 CA LYS 31 -15.645 -1.449 -1.042 1.00 0.50 C ATOM 458 C LYS 31 -15.469 -0.051 -0.462 1.00 0.50 C ATOM 459 O LYS 31 -16.417 0.539 0.056 1.00 0.50 O ATOM 460 CB LYS 31 -15.392 -2.498 0.045 1.00 0.50 C ATOM 461 CG LYS 31 -16.316 -2.371 1.247 1.00 0.50 C ATOM 462 CD LYS 31 -16.072 -3.485 2.255 1.00 0.50 C ATOM 463 CE LYS 31 -16.973 -3.347 3.476 1.00 0.50 C ATOM 464 NZ LYS 31 -16.724 -4.428 4.472 1.00 0.50 N ATOM 478 N VAL 32 -14.251 0.472 -0.551 1.00 0.50 N ATOM 479 CA VAL 32 -13.944 1.792 -0.014 1.00 0.50 C ATOM 480 C VAL 32 -14.183 2.880 -1.053 1.00 0.50 C ATOM 481 O VAL 32 -14.406 4.041 -0.710 1.00 0.50 O ATOM 482 CB VAL 32 -12.482 1.870 0.482 1.00 0.50 C ATOM 483 CG1 VAL 32 -12.141 3.284 0.938 1.00 0.50 C ATOM 484 CG2 VAL 32 -12.253 0.880 1.619 1.00 0.50 C ATOM 494 N ASN 33 -14.136 2.497 -2.325 1.00 0.50 N ATOM 495 CA ASN 33 -14.334 3.442 -3.417 1.00 0.50 C ATOM 496 C ASN 33 -13.064 4.234 -3.698 1.00 0.50 C ATOM 497 O ASN 33 -13.121 5.422 -4.016 1.00 0.50 O ATOM 498 CB ASN 33 -15.492 4.393 -3.096 1.00 0.50 C ATOM 499 CG ASN 33 -16.837 3.689 -3.090 1.00 0.50 C ATOM 500 OD1 ASN 33 -17.027 2.682 -3.776 1.00 0.50 O ATOM 501 ND2 ASN 33 -17.780 4.211 -2.314 1.00 0.50 N ATOM 508 N LEU 34 -11.920 3.571 -3.577 1.00 0.50 N ATOM 509 CA LEU 34 -10.635 4.206 -3.841 1.00 0.50 C ATOM 510 C LEU 34 -9.801 3.381 -4.814 1.00 0.50 C ATOM 511 O LEU 34 -10.018 2.179 -4.965 1.00 0.50 O ATOM 512 CB LEU 34 -9.859 4.400 -2.533 1.00 0.50 C ATOM 513 CG LEU 34 -10.515 5.304 -1.486 1.00 0.50 C ATOM 514 CD1 LEU 34 -9.724 5.260 -0.185 1.00 0.50 C ATOM 515 CD2 LEU 34 -10.602 6.732 -2.007 1.00 0.50 C ATOM 527 N SER 35 -8.850 4.034 -5.473 1.00 0.50 N ATOM 528 CA SER 35 -7.984 3.362 -6.433 1.00 0.50 C ATOM 529 C SER 35 -7.142 2.288 -5.758 1.00 0.50 C ATOM 530 O SER 35 -6.948 2.311 -4.542 1.00 0.50 O ATOM 531 CB SER 35 -7.071 4.376 -7.129 1.00 0.50 C ATOM 532 OG SER 35 -6.150 4.931 -6.204 1.00 0.50 O ATOM 538 N VAL 36 -6.644 1.347 -6.552 1.00 0.50 N ATOM 539 CA VAL 36 -5.821 0.261 -6.031 1.00 0.50 C ATOM 540 C VAL 36 -4.574 0.798 -5.340 1.00 0.50 C ATOM 541 O VAL 36 -4.235 0.374 -4.235 1.00 0.50 O ATOM 542 CB VAL 36 -5.406 -0.717 -7.153 1.00 0.50 C ATOM 543 CG1 VAL 36 -4.388 -1.729 -6.638 1.00 0.50 C ATOM 544 CG2 VAL 36 -6.628 -1.436 -7.711 1.00 0.50 C ATOM 554 N GLU 37 -3.894 1.731 -5.997 1.00 0.50 N ATOM 555 CA GLU 37 -2.683 2.328 -5.447 1.00 0.50 C ATOM 556 C GLU 37 -2.956 2.986 -4.101 1.00 0.50 C ATOM 557 O GLU 37 -2.110 2.969 -3.208 1.00 0.50 O ATOM 558 CB GLU 37 -2.104 3.357 -6.422 1.00 0.50 C ATOM 559 CG GLU 37 -1.495 2.742 -7.675 1.00 0.50 C ATOM 560 CD GLU 37 -1.036 3.774 -8.689 1.00 0.50 C ATOM 561 OE1 GLU 37 -1.248 4.986 -8.468 1.00 0.50 O ATOM 562 OE2 GLU 37 -0.462 3.363 -9.726 1.00 0.50 O ATOM 569 N SER 38 -4.142 3.569 -3.962 1.00 0.50 N ATOM 570 CA SER 38 -4.512 4.275 -2.742 1.00 0.50 C ATOM 571 C SER 38 -4.864 3.299 -1.627 1.00 0.50 C ATOM 572 O SER 38 -4.670 3.593 -0.447 1.00 0.50 O ATOM 573 CB SER 38 -5.695 5.211 -3.004 1.00 0.50 C ATOM 574 OG SER 38 -5.329 6.228 -3.922 1.00 0.50 O ATOM 580 N THR 39 -5.386 2.138 -2.007 1.00 0.50 N ATOM 581 CA THR 39 -5.689 1.083 -1.046 1.00 0.50 C ATOM 582 C THR 39 -4.416 0.489 -0.458 1.00 0.50 C ATOM 583 O THR 39 -4.276 0.378 0.759 1.00 0.50 O ATOM 584 CB THR 39 -6.521 -0.043 -1.700 1.00 0.50 C ATOM 585 OG1 THR 39 -7.774 0.501 -2.133 1.00 0.50 O ATOM 586 CG2 THR 39 -6.780 -1.177 -0.716 1.00 0.50 C ATOM 594 N ALA 40 -3.491 0.105 -1.331 1.00 0.50 N ATOM 595 CA ALA 40 -2.191 -0.394 -0.899 1.00 0.50 C ATOM 596 C ALA 40 -1.480 0.616 -0.009 1.00 0.50 C ATOM 597 O ALA 40 -0.911 0.258 1.023 1.00 0.50 O ATOM 598 CB ALA 40 -1.323 -0.723 -2.111 1.00 0.50 C ATOM 604 N LEU 41 -1.515 1.882 -0.412 1.00 0.50 N ATOM 605 CA LEU 41 -0.896 2.951 0.361 1.00 0.50 C ATOM 606 C LEU 41 -1.376 2.935 1.807 1.00 0.50 C ATOM 607 O LEU 41 -0.594 3.142 2.734 1.00 0.50 O ATOM 608 CB LEU 41 -1.207 4.312 -0.271 1.00 0.50 C ATOM 609 CG LEU 41 -0.634 5.538 0.445 1.00 0.50 C ATOM 610 CD1 LEU 41 0.887 5.472 0.464 1.00 0.50 C ATOM 611 CD2 LEU 41 -1.103 6.813 -0.243 1.00 0.50 C ATOM 623 N ALA 42 -2.670 2.690 1.992 1.00 0.50 N ATOM 624 CA ALA 42 -3.256 2.638 3.326 1.00 0.50 C ATOM 625 C ALA 42 -2.740 1.437 4.109 1.00 0.50 C ATOM 626 O ALA 42 -2.390 1.554 5.283 1.00 0.50 O ATOM 627 CB ALA 42 -4.779 2.584 3.231 1.00 0.50 C ATOM 633 N VAL 43 -2.696 0.284 3.452 1.00 0.50 N ATOM 634 CA VAL 43 -2.325 -0.961 4.114 1.00 0.50 C ATOM 635 C VAL 43 -0.887 -0.912 4.613 1.00 0.50 C ATOM 636 O VAL 43 -0.619 -1.163 5.788 1.00 0.50 O ATOM 637 CB VAL 43 -2.499 -2.172 3.171 1.00 0.50 C ATOM 638 CG1 VAL 43 -1.969 -3.445 3.822 1.00 0.50 C ATOM 639 CG2 VAL 43 -3.966 -2.344 2.792 1.00 0.50 C ATOM 649 N GLY 44 0.036 -0.587 3.715 1.00 0.50 N ATOM 650 CA GLY 44 1.433 -0.395 4.086 1.00 0.50 C ATOM 651 C GLY 44 1.578 0.693 5.142 1.00 0.50 C ATOM 652 O GLY 44 2.413 0.592 6.040 1.00 0.50 O ATOM 656 N TRP 45 0.761 1.735 5.027 1.00 0.50 N ATOM 657 CA TRP 45 0.750 2.812 6.010 1.00 0.50 C ATOM 658 C TRP 45 0.247 2.320 7.360 1.00 0.50 C ATOM 659 O TRP 45 0.943 2.428 8.370 1.00 0.50 O ATOM 660 CB TRP 45 -0.123 3.974 5.519 1.00 0.50 C ATOM 661 CG TRP 45 -0.235 5.106 6.499 1.00 0.50 C ATOM 662 CD1 TRP 45 -1.304 5.392 7.303 1.00 0.50 C ATOM 663 CD2 TRP 45 0.757 6.099 6.774 1.00 0.50 C ATOM 664 NE1 TRP 45 -1.034 6.506 8.063 1.00 0.50 N ATOM 665 CE2 TRP 45 0.222 6.959 7.758 1.00 0.50 C ATOM 666 CE3 TRP 45 2.046 6.345 6.284 1.00 0.50 C ATOM 667 CZ2 TRP 45 0.934 8.050 8.263 1.00 0.50 C ATOM 668 CZ3 TRP 45 2.754 7.430 6.787 1.00 0.50 C ATOM 669 CH2 TRP 45 2.196 8.269 7.765 1.00 0.50 H ATOM 680 N LEU 46 -0.968 1.780 7.373 1.00 0.50 N ATOM 681 CA LEU 46 -1.567 1.271 8.600 1.00 0.50 C ATOM 682 C LEU 46 -0.745 0.126 9.180 1.00 0.50 C ATOM 683 O LEU 46 -0.576 0.024 10.395 1.00 0.50 O ATOM 684 CB LEU 46 -3.000 0.796 8.335 1.00 0.50 C ATOM 685 CG LEU 46 -4.026 1.886 8.014 1.00 0.50 C ATOM 686 CD1 LEU 46 -5.349 1.256 7.599 1.00 0.50 C ATOM 687 CD2 LEU 46 -4.223 2.791 9.223 1.00 0.50 C ATOM 699 N ALA 47 -0.239 -0.735 8.305 1.00 0.50 N ATOM 700 CA ALA 47 0.566 -1.875 8.728 1.00 0.50 C ATOM 701 C ALA 47 1.810 -1.421 9.481 1.00 0.50 C ATOM 702 O ALA 47 2.184 -2.013 10.494 1.00 0.50 O ATOM 703 CB ALA 47 0.966 -2.715 7.519 1.00 0.50 C ATOM 709 N ARG 48 2.449 -0.370 8.979 1.00 0.50 N ATOM 710 CA ARG 48 3.652 0.165 9.604 1.00 0.50 C ATOM 711 C ARG 48 3.353 0.719 10.992 1.00 0.50 C ATOM 712 O ARG 48 4.193 0.656 11.891 1.00 0.50 O ATOM 713 CB ARG 48 4.268 1.261 8.730 1.00 0.50 C ATOM 714 CG ARG 48 5.576 1.816 9.277 1.00 0.50 C ATOM 715 CD ARG 48 6.142 2.903 8.375 1.00 0.50 C ATOM 716 NE ARG 48 5.285 4.083 8.350 1.00 0.50 N ATOM 717 CZ ARG 48 5.227 5.004 9.310 1.00 0.50 C ATOM 718 NH1 ARG 48 6.108 5.009 10.306 1.00 0.50 H ATOM 719 NH2 ARG 48 4.266 5.926 9.279 1.00 0.50 H ATOM 733 N GLU 49 2.153 1.264 11.160 1.00 0.50 N ATOM 734 CA GLU 49 1.740 1.830 12.438 1.00 0.50 C ATOM 735 C GLU 49 1.239 0.748 13.385 1.00 0.50 C ATOM 736 O GLU 49 0.994 1.005 14.563 1.00 0.50 O ATOM 737 CB GLU 49 0.647 2.883 12.228 1.00 0.50 C ATOM 738 CG GLU 49 1.120 4.115 11.467 1.00 0.50 C ATOM 739 CD GLU 49 0.024 5.141 11.245 1.00 0.50 C ATOM 740 OE1 GLU 49 -1.144 4.876 11.604 1.00 0.50 O ATOM 741 OE2 GLU 49 0.336 6.224 10.696 1.00 0.50 O ATOM 748 N ASN 50 1.087 -0.464 12.862 1.00 0.50 N ATOM 749 CA ASN 50 0.614 -1.589 13.660 1.00 0.50 C ATOM 750 C ASN 50 -0.836 -1.924 13.335 1.00 0.50 C ATOM 751 O ASN 50 -1.123 -2.563 12.323 1.00 0.50 O ATOM 752 CB ASN 50 0.766 -1.286 15.154 1.00 0.50 C ATOM 753 CG ASN 50 0.523 -2.506 16.023 1.00 0.50 C ATOM 754 OD1 ASN 50 0.668 -3.645 15.568 1.00 0.50 O ATOM 755 ND2 ASN 50 0.153 -2.282 17.278 1.00 0.50 N ATOM 762 N LYS 51 -1.747 -1.489 14.200 1.00 0.50 N ATOM 763 CA LYS 51 -3.169 -1.743 14.006 1.00 0.50 C ATOM 764 C LYS 51 -3.474 -2.099 12.555 1.00 0.50 C ATOM 765 O LYS 51 -4.309 -1.464 11.913 1.00 0.50 O ATOM 766 CB LYS 51 -3.992 -0.522 14.424 1.00 0.50 C ATOM 767 CG LYS 51 -5.495 -0.728 14.316 1.00 0.50 C ATOM 768 CD LYS 51 -6.261 0.492 14.811 1.00 0.50 C ATOM 769 CE LYS 51 -7.768 0.297 14.693 1.00 0.50 C ATOM 770 NZ LYS 51 -8.520 1.489 15.180 1.00 0.50 N ATOM 784 N VAL 52 -2.787 -3.116 12.045 1.00 0.50 N ATOM 785 CA VAL 52 -2.983 -3.558 10.670 1.00 0.50 C ATOM 786 C VAL 52 -2.132 -4.783 10.358 1.00 0.50 C ATOM 787 O VAL 52 -0.906 -4.741 10.461 1.00 0.50 O ATOM 788 CB VAL 52 -2.649 -2.432 9.666 1.00 0.50 C ATOM 789 CG1 VAL 52 -2.753 -2.939 8.231 1.00 0.50 C ATOM 790 CG2 VAL 52 -3.579 -1.242 9.873 1.00 0.50 C ATOM 800 N VAL 53 -2.789 -5.873 9.980 1.00 0.50 N ATOM 801 CA VAL 53 -2.094 -7.113 9.652 1.00 0.50 C ATOM 802 C VAL 53 -2.493 -7.620 8.273 1.00 0.50 C ATOM 803 O VAL 53 -3.569 -8.193 8.099 1.00 0.50 O ATOM 804 CB VAL 53 -2.378 -8.209 10.703 1.00 0.50 C ATOM 805 CG1 VAL 53 -1.645 -9.499 10.350 1.00 0.50 C ATOM 806 CG2 VAL 53 -1.965 -7.733 12.092 1.00 0.50 C ATOM 816 N ILE 54 -1.620 -7.406 7.294 1.00 0.50 N ATOM 817 CA ILE 54 -1.880 -7.842 5.927 1.00 0.50 C ATOM 818 C ILE 54 -0.910 -8.938 5.505 1.00 0.50 C ATOM 819 O ILE 54 0.285 -8.692 5.340 1.00 0.50 O ATOM 820 CB ILE 54 -1.782 -6.658 4.936 1.00 0.50 C ATOM 821 CG1 ILE 54 -2.782 -5.561 5.317 1.00 0.50 C ATOM 822 CG2 ILE 54 -2.020 -7.134 3.502 1.00 0.50 C ATOM 823 CD1 ILE 54 -2.210 -4.507 6.253 1.00 0.50 C ATOM 835 N GLU 55 -1.431 -10.147 5.332 1.00 0.50 N ATOM 836 CA GLU 55 -0.613 -11.284 4.928 1.00 0.50 C ATOM 837 C GLU 55 -0.802 -11.602 3.450 1.00 0.50 C ATOM 838 O GLU 55 -1.876 -12.033 3.030 1.00 0.50 O ATOM 839 CB GLU 55 -0.953 -12.515 5.772 1.00 0.50 C ATOM 840 CG GLU 55 -0.566 -12.380 7.239 1.00 0.50 C ATOM 841 CD GLU 55 -0.836 -13.636 8.049 1.00 0.50 C ATOM 842 OE1 GLU 55 -1.324 -14.637 7.482 1.00 0.50 O ATOM 843 OE2 GLU 55 -0.564 -13.613 9.275 1.00 0.50 O ATOM 850 N ARG 56 0.248 -11.385 2.665 1.00 0.50 N ATOM 851 CA ARG 56 0.199 -11.648 1.231 1.00 0.50 C ATOM 852 C ARG 56 0.743 -13.034 0.907 1.00 0.50 C ATOM 853 O ARG 56 1.954 -13.254 0.919 1.00 0.50 O ATOM 854 CB ARG 56 0.994 -10.586 0.465 1.00 0.50 C ATOM 855 CG ARG 56 0.981 -10.785 -1.044 1.00 0.50 C ATOM 856 CD ARG 56 1.739 -9.676 -1.760 1.00 0.50 C ATOM 857 NE ARG 56 1.809 -9.912 -3.199 1.00 0.50 N ATOM 858 CZ ARG 56 2.370 -9.088 -4.080 1.00 0.50 C ATOM 859 NH1 ARG 56 3.091 -8.044 -3.677 1.00 0.50 H ATOM 860 NH2 ARG 56 2.197 -9.302 -5.382 1.00 0.50 H ATOM 874 N LYS 57 -0.159 -13.966 0.619 1.00 0.50 N ATOM 875 CA LYS 57 0.228 -15.333 0.291 1.00 0.50 C ATOM 876 C LYS 57 -0.521 -15.838 -0.934 1.00 0.50 C ATOM 877 O LYS 57 -1.739 -15.688 -1.036 1.00 0.50 O ATOM 878 CB LYS 57 -0.032 -16.262 1.479 1.00 0.50 C ATOM 879 CG LYS 57 0.831 -15.961 2.695 1.00 0.50 C ATOM 880 CD LYS 57 0.547 -16.932 3.833 1.00 0.50 C ATOM 881 CE LYS 57 1.414 -16.641 5.052 1.00 0.50 C ATOM 882 NZ LYS 57 1.115 -17.572 6.178 1.00 0.50 N ATOM 896 N ASN 58 0.213 -16.437 -1.866 1.00 0.50 N ATOM 897 CA ASN 58 -0.381 -16.966 -3.088 1.00 0.50 C ATOM 898 C ASN 58 -1.134 -15.883 -3.848 1.00 0.50 C ATOM 899 O ASN 58 -2.294 -16.062 -4.216 1.00 0.50 O ATOM 900 CB ASN 58 -1.318 -18.136 -2.763 1.00 0.50 C ATOM 901 CG ASN 58 -1.663 -18.960 -3.989 1.00 0.50 C ATOM 902 OD1 ASN 58 -0.886 -19.024 -4.947 1.00 0.50 O ATOM 903 ND2 ASN 58 -2.828 -19.596 -3.972 1.00 0.50 N ATOM 910 N GLY 59 -0.467 -14.756 -4.078 1.00 0.50 N ATOM 911 CA GLY 59 -1.074 -13.640 -4.795 1.00 0.50 C ATOM 912 C GLY 59 -2.302 -13.117 -4.063 1.00 0.50 C ATOM 913 O GLY 59 -2.890 -12.110 -4.456 1.00 0.50 O ATOM 917 N LEU 60 -2.687 -13.810 -2.995 1.00 0.50 N ATOM 918 CA LEU 60 -3.848 -13.416 -2.206 1.00 0.50 C ATOM 919 C LEU 60 -3.459 -12.442 -1.101 1.00 0.50 C ATOM 920 O LEU 60 -2.371 -12.536 -0.532 1.00 0.50 O ATOM 921 CB LEU 60 -4.517 -14.652 -1.592 1.00 0.50 C ATOM 922 CG LEU 60 -5.062 -15.687 -2.579 1.00 0.50 C ATOM 923 CD1 LEU 60 -5.622 -16.886 -1.825 1.00 0.50 C ATOM 924 CD2 LEU 60 -6.138 -15.059 -3.456 1.00 0.50 C ATOM 936 N ILE 61 -4.353 -11.505 -0.804 1.00 0.50 N ATOM 937 CA ILE 61 -4.104 -10.510 0.233 1.00 0.50 C ATOM 938 C ILE 61 -4.976 -10.760 1.457 1.00 0.50 C ATOM 939 O ILE 61 -6.203 -10.721 1.375 1.00 0.50 O ATOM 940 CB ILE 61 -4.357 -9.079 -0.295 1.00 0.50 C ATOM 941 CG1 ILE 61 -3.522 -8.820 -1.554 1.00 0.50 C ATOM 942 CG2 ILE 61 -4.043 -8.041 0.785 1.00 0.50 C ATOM 943 CD1 ILE 61 -2.024 -8.951 -1.333 1.00 0.50 C ATOM 955 N GLU 62 -4.334 -11.020 2.591 1.00 0.50 N ATOM 956 CA GLU 62 -5.050 -11.278 3.835 1.00 0.50 C ATOM 957 C GLU 62 -5.037 -10.054 4.741 1.00 0.50 C ATOM 958 O GLU 62 -4.123 -9.874 5.547 1.00 0.50 O ATOM 959 CB GLU 62 -4.433 -12.473 4.569 1.00 0.50 C ATOM 960 CG GLU 62 -4.550 -13.787 3.807 1.00 0.50 C ATOM 961 CD GLU 62 -3.964 -14.970 4.557 1.00 0.50 C ATOM 962 OE1 GLU 62 -3.462 -14.790 5.688 1.00 0.50 O ATOM 963 OE2 GLU 62 -3.999 -16.093 3.998 1.00 0.50 O ATOM 970 N ILE 63 -6.056 -9.212 4.605 1.00 0.50 N ATOM 971 CA ILE 63 -6.165 -8.003 5.412 1.00 0.50 C ATOM 972 C ILE 63 -7.047 -8.232 6.633 1.00 0.50 C ATOM 973 O ILE 63 -8.161 -8.741 6.518 1.00 0.50 O ATOM 974 CB ILE 63 -6.732 -6.827 4.582 1.00 0.50 C ATOM 975 CG1 ILE 63 -5.806 -6.515 3.400 1.00 0.50 C ATOM 976 CG2 ILE 63 -6.924 -5.589 5.460 1.00 0.50 C ATOM 977 CD1 ILE 63 -6.393 -5.524 2.407 1.00 0.50 C ATOM 989 N TYR 64 -6.540 -7.854 7.801 1.00 0.50 N ATOM 990 CA TYR 64 -7.281 -8.017 9.047 1.00 0.50 C ATOM 991 C TYR 64 -6.728 -7.111 10.139 1.00 0.50 C ATOM 992 O TYR 64 -5.613 -6.602 10.032 1.00 0.50 O ATOM 993 CB TYR 64 -7.231 -9.478 9.512 1.00 0.50 C ATOM 994 CG TYR 64 -8.129 -9.771 10.694 1.00 0.50 C ATOM 995 CD1 TYR 64 -9.509 -9.871 10.536 1.00 0.50 C ATOM 996 CD2 TYR 64 -7.594 -9.943 11.969 1.00 0.50 C ATOM 997 CE1 TYR 64 -10.339 -10.137 11.622 1.00 0.50 C ATOM 998 CE2 TYR 64 -8.414 -10.208 13.060 1.00 0.50 C ATOM 999 CZ TYR 64 -9.783 -10.304 12.878 1.00 0.50 C ATOM 1000 OH TYR 64 -10.597 -10.568 13.957 1.00 0.50 H ATOM 1010 N ASN 65 -7.516 -6.912 11.191 1.00 0.50 N ATOM 1011 CA ASN 65 -7.107 -6.068 12.306 1.00 0.50 C ATOM 1012 C ASN 65 -6.292 -6.856 13.324 1.00 0.50 C ATOM 1013 O ASN 65 -5.105 -7.113 13.118 1.00 0.50 O ATOM 1014 CB ASN 65 -8.333 -5.442 12.979 1.00 0.50 C ATOM 1015 CG ASN 65 -7.958 -4.399 14.016 1.00 0.50 C ATOM 1016 OD1 ASN 65 -6.856 -3.842 13.981 1.00 0.50 O ATOM 1017 ND2 ASN 65 -8.864 -4.126 14.944 1.00 0.50 N ATOM 1024 N GLU 66 -6.934 -7.236 14.423 1.00 0.50 N ATOM 1025 CA GLU 66 -6.270 -7.995 15.475 1.00 0.50 C ATOM 1026 C GLU 66 -6.394 -9.494 15.235 1.00 0.50 C ATOM 1027 O GLU 66 -7.487 -10.057 15.314 1.00 0.50 O ATOM 1028 CB GLU 66 -6.856 -7.638 16.844 1.00 0.50 C ATOM 1029 CG GLU 66 -6.577 -6.204 17.276 1.00 0.50 C ATOM 1030 CD GLU 66 -7.119 -5.876 18.656 1.00 0.50 C ATOM 1031 OE1 GLU 66 -7.748 -6.750 19.290 1.00 0.50 O ATOM 1032 OE2 GLU 66 -6.919 -4.721 19.106 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 493 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 32.17 85.7 126 100.0 126 ARMSMC SECONDARY STRUCTURE . . 20.37 91.7 96 100.0 96 ARMSMC SURFACE . . . . . . . . 34.48 85.6 90 100.0 90 ARMSMC BURIED . . . . . . . . 25.47 86.1 36 100.0 36 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.58 49.0 51 100.0 51 ARMSSC1 RELIABLE SIDE CHAINS . 78.28 52.3 44 100.0 44 ARMSSC1 SECONDARY STRUCTURE . . 76.68 55.3 38 100.0 38 ARMSSC1 SURFACE . . . . . . . . 84.82 43.2 37 100.0 37 ARMSSC1 BURIED . . . . . . . . 76.33 64.3 14 100.0 14 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.30 57.5 40 100.0 40 ARMSSC2 RELIABLE SIDE CHAINS . 62.52 66.7 27 100.0 27 ARMSSC2 SECONDARY STRUCTURE . . 73.58 55.2 29 100.0 29 ARMSSC2 SURFACE . . . . . . . . 68.58 56.2 32 100.0 32 ARMSSC2 BURIED . . . . . . . . 61.89 62.5 8 100.0 8 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.13 31.2 16 100.0 16 ARMSSC3 RELIABLE SIDE CHAINS . 76.13 31.2 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 87.73 18.2 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 76.13 31.2 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.92 44.4 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 81.92 44.4 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 72.84 50.0 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 81.92 44.4 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 1.57 (Number of atoms: 64) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 1.57 64 100.0 64 CRMSCA CRN = ALL/NP . . . . . 0.0246 CRMSCA SECONDARY STRUCTURE . . 1.41 48 100.0 48 CRMSCA SURFACE . . . . . . . . 1.68 46 100.0 46 CRMSCA BURIED . . . . . . . . 1.24 18 100.0 18 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 1.62 315 100.0 315 CRMSMC SECONDARY STRUCTURE . . 1.44 237 100.0 237 CRMSMC SURFACE . . . . . . . . 1.74 225 100.0 225 CRMSMC BURIED . . . . . . . . 1.30 90 100.0 90 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.04 237 31.5 752 CRMSSC RELIABLE SIDE CHAINS . 3.14 195 27.5 710 CRMSSC SECONDARY STRUCTURE . . 2.78 181 31.2 580 CRMSSC SURFACE . . . . . . . . 3.32 177 32.6 543 CRMSSC BURIED . . . . . . . . 2.01 60 28.7 209 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 2.39 493 48.9 1008 CRMSALL SECONDARY STRUCTURE . . 2.18 373 48.3 772 CRMSALL SURFACE . . . . . . . . 2.61 361 49.7 727 CRMSALL BURIED . . . . . . . . 1.64 132 47.0 281 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.931 0.432 0.226 64 100.0 64 ERRCA SECONDARY STRUCTURE . . 0.802 0.403 0.216 48 100.0 48 ERRCA SURFACE . . . . . . . . 1.032 0.455 0.235 46 100.0 46 ERRCA BURIED . . . . . . . . 0.674 0.373 0.205 18 100.0 18 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.956 0.433 0.228 315 100.0 315 ERRMC SECONDARY STRUCTURE . . 0.823 0.408 0.219 237 100.0 237 ERRMC SURFACE . . . . . . . . 1.050 0.451 0.233 225 100.0 225 ERRMC BURIED . . . . . . . . 0.722 0.390 0.216 90 100.0 90 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.099 0.591 0.298 237 31.5 752 ERRSC RELIABLE SIDE CHAINS . 2.174 0.595 0.301 195 27.5 710 ERRSC SECONDARY STRUCTURE . . 1.857 0.566 0.287 181 31.2 580 ERRSC SURFACE . . . . . . . . 2.353 0.612 0.308 177 32.6 543 ERRSC BURIED . . . . . . . . 1.352 0.529 0.270 60 28.7 209 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 1.478 0.504 0.259 493 48.9 1008 ERRALL SECONDARY STRUCTURE . . 1.300 0.478 0.249 373 48.3 772 ERRALL SURFACE . . . . . . . . 1.659 0.525 0.267 361 49.7 727 ERRALL BURIED . . . . . . . . 0.983 0.445 0.237 132 47.0 281 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 20 51 61 64 64 64 64 DISTCA CA (P) 31.25 79.69 95.31 100.00 100.00 64 DISTCA CA (RMS) 0.77 1.19 1.45 1.57 1.57 DISTCA ALL (N) 115 317 401 471 493 493 1008 DISTALL ALL (P) 11.41 31.45 39.78 46.73 48.91 1008 DISTALL ALL (RMS) 0.75 1.24 1.57 2.05 2.39 DISTALL END of the results output