####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 64 ( 493), selected 64 , name T0560TS436_1-D1 # Molecule2: number of CA atoms 64 ( 1008), selected 64 , name T0560-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0560TS436_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 55 3 - 57 4.98 11.96 LCS_AVERAGE: 77.61 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 47 6 - 52 1.93 13.35 LONGEST_CONTINUOUS_SEGMENT: 47 7 - 53 1.79 13.19 LCS_AVERAGE: 59.11 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 21 - 49 0.97 13.22 LONGEST_CONTINUOUS_SEGMENT: 29 22 - 50 0.97 13.04 LONGEST_CONTINUOUS_SEGMENT: 29 23 - 51 0.96 12.84 LCS_AVERAGE: 31.79 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 64 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 3 K 3 3 3 55 3 3 3 4 6 8 9 9 10 25 32 41 47 50 51 51 52 52 52 52 LCS_GDT K 4 K 4 3 3 55 3 3 4 7 8 16 18 23 31 35 46 50 50 50 51 51 52 52 52 53 LCS_GDT I 5 I 5 3 3 55 3 3 3 7 8 16 18 23 31 35 46 50 50 50 51 51 52 52 52 53 LCS_GDT V 6 V 6 3 47 55 0 4 9 12 21 30 39 44 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT G 7 G 7 21 47 55 7 14 21 26 41 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT A 8 A 8 21 47 55 5 14 21 26 41 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT N 9 N 9 21 47 55 9 15 27 38 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT A 10 A 10 21 47 55 9 15 32 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT G 11 G 11 21 47 55 9 15 32 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT K 12 K 12 21 47 55 9 15 32 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT V 13 V 13 21 47 55 9 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT W 14 W 14 21 47 55 9 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT H 15 H 15 21 47 55 9 17 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT A 16 A 16 21 47 55 9 18 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT L 17 L 17 21 47 55 8 21 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT N 18 N 18 21 47 55 6 15 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT E 19 E 19 21 47 55 6 15 26 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT A 20 A 20 28 47 55 3 15 31 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT D 21 D 21 29 47 55 9 15 31 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT G 22 G 22 29 47 55 6 23 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT I 23 I 23 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT S 24 S 24 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT I 25 I 25 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT P 26 P 26 29 47 55 6 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT E 27 E 27 29 47 55 10 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT L 28 L 28 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT A 29 A 29 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT R 30 R 30 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT K 31 K 31 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT V 32 V 32 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT N 33 N 33 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT L 34 L 34 29 47 55 6 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT S 35 S 35 29 47 55 10 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT V 36 V 36 29 47 55 6 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT E 37 E 37 29 47 55 10 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT S 38 S 38 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT T 39 T 39 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT A 40 A 40 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT L 41 L 41 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT A 42 A 42 29 47 55 10 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT V 43 V 43 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT G 44 G 44 29 47 55 6 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT W 45 W 45 29 47 55 5 25 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT L 46 L 46 29 47 55 10 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT A 47 A 47 29 47 55 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT R 48 R 48 29 47 55 4 20 33 38 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT E 49 E 49 29 47 55 6 12 31 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT N 50 N 50 29 47 55 4 13 25 38 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT K 51 K 51 29 47 55 6 13 25 31 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT V 52 V 52 20 47 55 6 11 22 34 41 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT V 53 V 53 12 47 55 6 10 15 28 37 41 45 47 48 48 48 50 50 50 51 51 52 52 52 53 LCS_GDT I 54 I 54 9 34 55 3 4 10 12 17 20 27 38 41 46 48 49 50 50 50 51 52 52 52 53 LCS_GDT E 55 E 55 4 23 55 3 4 8 12 17 19 27 32 37 41 43 47 50 50 50 50 51 52 52 53 LCS_GDT R 56 R 56 4 14 55 3 4 6 9 13 14 17 21 24 27 32 35 41 44 45 48 51 51 52 53 LCS_GDT K 57 K 57 3 13 55 0 4 5 9 13 14 17 18 22 25 30 35 38 43 45 47 51 51 52 52 LCS_GDT N 58 N 58 3 8 51 1 4 4 7 9 14 14 15 18 21 23 25 27 32 34 39 42 44 47 50 LCS_GDT G 59 G 59 3 8 22 3 3 4 6 8 9 9 9 11 11 11 16 17 20 23 25 26 27 30 32 LCS_GDT L 60 L 60 4 8 15 3 4 5 6 8 9 9 9 9 10 10 12 13 14 16 19 19 20 21 23 LCS_GDT I 61 I 61 5 8 11 3 4 5 6 8 9 9 9 9 10 10 10 10 10 11 11 11 11 14 15 LCS_GDT E 62 E 62 5 8 11 3 4 5 6 8 9 9 9 9 10 10 10 10 10 11 11 11 11 14 16 LCS_GDT I 63 I 63 5 8 11 3 4 5 6 8 9 9 9 9 10 10 10 10 10 11 11 11 11 11 12 LCS_GDT Y 64 Y 64 5 8 11 3 4 5 6 8 9 9 9 9 10 10 10 10 10 11 11 11 11 11 12 LCS_GDT N 65 N 65 5 8 11 3 4 5 6 8 9 9 9 9 10 10 10 10 10 11 11 11 11 11 12 LCS_GDT E 66 E 66 3 8 11 3 3 4 6 8 9 9 9 9 10 10 10 10 10 11 11 11 11 11 12 LCS_AVERAGE LCS_A: 56.17 ( 31.79 59.11 77.61 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 26 33 39 43 44 46 47 48 48 48 50 50 50 51 51 52 52 52 53 GDT PERCENT_AT 23.44 40.62 51.56 60.94 67.19 68.75 71.88 73.44 75.00 75.00 75.00 78.12 78.12 78.12 79.69 79.69 81.25 81.25 81.25 82.81 GDT RMS_LOCAL 0.36 0.63 0.96 1.29 1.44 1.50 1.68 1.79 2.01 2.01 2.01 2.75 2.75 2.75 3.15 3.15 3.37 3.37 3.37 4.09 GDT RMS_ALL_AT 13.05 13.00 13.37 13.43 13.35 13.28 13.32 13.19 13.22 13.22 13.22 13.42 13.42 13.42 13.51 13.51 13.24 13.24 13.24 12.35 # Checking swapping # possible swapping detected: E 37 E 37 # possible swapping detected: E 49 E 49 # possible swapping detected: Y 64 Y 64 # possible swapping detected: E 66 E 66 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA K 3 K 3 13.744 0 0.464 1.531 16.447 0.119 0.053 LGA K 4 K 4 10.832 0 0.634 1.228 15.866 0.000 0.000 LGA I 5 I 5 10.830 0 0.549 1.202 14.687 1.071 0.536 LGA V 6 V 6 6.858 0 0.478 0.777 10.212 17.738 13.605 LGA G 7 G 7 3.739 0 0.595 0.595 4.228 46.905 46.905 LGA A 8 A 8 3.520 0 0.045 0.046 4.112 50.238 47.619 LGA N 9 N 9 1.751 0 0.133 0.975 5.275 73.214 60.119 LGA A 10 A 10 1.465 0 0.121 0.121 1.773 79.286 78.000 LGA G 11 G 11 1.407 0 0.103 0.103 1.458 83.690 83.690 LGA K 12 K 12 1.123 0 0.084 1.091 4.008 85.952 76.032 LGA V 13 V 13 0.693 0 0.109 0.568 1.490 90.476 87.891 LGA W 14 W 14 0.735 0 0.107 1.045 5.030 92.857 69.524 LGA H 15 H 15 0.866 0 0.091 1.053 2.987 88.214 75.952 LGA A 16 A 16 1.006 0 0.154 0.155 1.549 81.548 81.524 LGA L 17 L 17 1.158 0 0.149 0.142 1.422 83.690 82.560 LGA N 18 N 18 1.918 0 0.189 1.008 5.236 72.857 57.857 LGA E 19 E 19 2.189 0 0.182 0.702 5.179 66.786 53.757 LGA A 20 A 20 1.841 0 0.266 0.278 2.083 70.833 71.238 LGA D 21 D 21 1.722 0 0.737 0.609 4.369 61.905 62.440 LGA G 22 G 22 1.348 0 0.073 0.073 1.886 81.548 81.548 LGA I 23 I 23 1.566 0 0.115 1.015 3.132 75.000 68.095 LGA S 24 S 24 1.510 0 0.088 0.680 3.124 79.286 73.333 LGA I 25 I 25 0.991 0 0.077 1.300 3.189 85.952 76.726 LGA P 26 P 26 1.021 0 0.119 0.165 1.366 85.952 85.306 LGA E 27 E 27 1.396 0 0.083 1.115 4.952 79.286 65.132 LGA L 28 L 28 1.456 0 0.118 1.328 3.225 79.286 75.417 LGA A 29 A 29 0.987 0 0.177 0.194 1.106 85.952 86.857 LGA R 30 R 30 1.452 0 0.226 1.143 7.969 75.119 49.004 LGA K 31 K 31 1.687 0 0.221 0.886 4.904 77.143 67.619 LGA V 32 V 32 1.595 0 0.046 0.070 1.744 72.857 74.082 LGA N 33 N 33 1.718 0 0.050 1.111 3.486 72.857 68.988 LGA L 34 L 34 1.357 0 0.067 0.938 2.756 85.952 76.488 LGA S 35 S 35 0.808 0 0.080 0.734 2.775 90.476 83.413 LGA V 36 V 36 0.735 0 0.045 0.988 2.675 90.476 83.129 LGA E 37 E 37 1.002 0 0.084 0.104 1.217 85.952 83.439 LGA S 38 S 38 1.122 0 0.092 0.765 3.106 83.810 77.778 LGA T 39 T 39 0.650 0 0.045 0.061 0.893 90.476 90.476 LGA A 40 A 40 0.543 0 0.090 0.095 0.745 90.476 90.476 LGA L 41 L 41 1.095 0 0.120 1.122 4.259 79.286 69.107 LGA A 42 A 42 1.352 0 0.091 0.097 1.769 79.286 79.714 LGA V 43 V 43 0.880 0 0.115 1.366 2.645 88.214 79.660 LGA G 44 G 44 2.099 0 0.149 0.149 2.374 66.786 66.786 LGA W 45 W 45 2.448 0 0.137 1.415 6.757 62.857 41.020 LGA L 46 L 46 0.904 0 0.048 0.187 1.378 90.595 87.143 LGA A 47 A 47 1.463 0 0.189 0.199 2.268 77.143 74.667 LGA R 48 R 48 2.926 0 0.103 1.640 13.898 62.857 28.139 LGA E 49 E 49 2.441 0 0.054 0.876 6.805 62.857 45.079 LGA N 50 N 50 1.947 0 0.112 1.211 4.624 62.143 53.810 LGA K 51 K 51 2.363 0 0.061 0.928 3.813 63.095 58.519 LGA V 52 V 52 2.601 0 0.062 0.541 3.217 60.952 60.476 LGA V 53 V 53 4.304 0 0.390 1.020 5.614 33.333 32.517 LGA I 54 I 54 9.309 0 0.218 0.983 13.830 2.143 1.071 LGA E 55 E 55 12.510 0 0.385 0.979 16.025 0.000 0.529 LGA R 56 R 56 18.860 0 0.141 0.821 29.969 0.000 0.000 LGA K 57 K 57 21.636 0 0.130 1.298 24.081 0.000 0.000 LGA N 58 N 58 28.393 0 0.576 1.010 31.864 0.000 0.000 LGA G 59 G 59 33.825 0 0.676 0.676 35.307 0.000 0.000 LGA L 60 L 60 35.953 0 0.530 1.492 40.599 0.000 0.000 LGA I 61 I 61 37.139 0 0.229 1.337 44.290 0.000 0.000 LGA E 62 E 62 33.890 0 0.081 0.892 35.478 0.000 0.000 LGA I 63 I 63 34.104 0 0.380 1.237 40.008 0.000 0.000 LGA Y 64 Y 64 31.193 0 0.167 1.085 36.366 0.000 0.000 LGA N 65 N 65 30.138 0 0.357 1.069 33.424 0.000 0.000 LGA E 66 E 66 25.229 0 0.217 1.325 27.270 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 64 256 256 100.00 493 493 100.00 64 SUMMARY(RMSD_GDC): 10.584 10.543 11.428 56.356 51.326 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 64 64 4.0 47 1.79 63.672 65.058 2.490 LGA_LOCAL RMSD: 1.788 Number of atoms: 47 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.193 Number of assigned atoms: 64 Std_ASGN_ATOMS RMSD: 10.584 Standard rmsd on all 64 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.286924 * X + 0.264405 * Y + -0.920741 * Z + -18.745554 Y_new = 0.956223 * X + -0.136796 * Y + 0.258698 * Z + -5.688780 Z_new = -0.057553 * X + -0.954661 * Y + -0.292080 * Z + 51.170738 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.279285 0.057585 -1.867705 [DEG: 73.2976 3.2994 -107.0116 ] ZXZ: -1.844701 1.867197 -3.081379 [DEG: -105.6936 106.9825 -176.5500 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0560TS436_1-D1 REMARK 2: T0560-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0560TS436_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 64 64 4.0 47 1.79 65.058 10.58 REMARK ---------------------------------------------------------- MOLECULE T0560TS436_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0560 REMARK MODEL 1 REFINED REMARK PARENT 3I4P_A ATOM 30 CA LYS 3 -3.501 13.924 19.567 1.00 2.32 C ATOM 31 N LYS 3 -2.459 13.510 20.437 1.00 2.32 N ATOM 34 C LYS 3 -3.182 13.198 18.238 1.00 2.32 C ATOM 35 O LYS 3 -2.831 13.861 17.238 1.00 2.32 O ATOM 36 CB LYS 3 -3.554 15.489 19.448 1.00 2.32 C ATOM 39 CG LYS 3 -4.984 16.022 19.083 1.00 2.32 C ATOM 42 CD LYS 3 -5.579 15.423 17.765 1.00 2.32 C ATOM 45 CE LYS 3 -7.029 15.937 17.518 1.00 2.32 C ATOM 48 NZ LYS 3 -7.627 15.244 16.292 1.00 2.32 N ATOM 52 CA LYS 4 -2.668 11.113 17.228 1.00 2.32 C ATOM 53 N LYS 4 -3.281 11.893 18.237 1.00 2.32 N ATOM 56 C LYS 4 -3.807 10.598 16.325 1.00 2.32 C ATOM 57 O LYS 4 -4.629 9.786 16.795 1.00 2.32 O ATOM 58 CB LYS 4 -1.827 9.966 17.893 1.00 2.32 C ATOM 61 CG LYS 4 -0.576 9.570 17.041 1.00 2.32 C ATOM 64 CD LYS 4 0.412 8.629 17.808 1.00 2.32 C ATOM 67 CE LYS 4 1.128 9.335 19.007 1.00 2.32 C ATOM 70 NZ LYS 4 2.247 8.447 19.552 1.00 2.32 N ATOM 74 CA ILE 5 -5.057 10.977 14.321 1.00 2.32 C ATOM 75 N ILE 5 -3.896 11.109 15.128 1.00 2.32 N ATOM 78 C ILE 5 -4.692 10.409 12.929 1.00 2.32 C ATOM 79 O ILE 5 -3.497 10.408 12.576 1.00 2.32 O ATOM 80 CB ILE 5 -5.744 12.399 14.242 1.00 2.32 C ATOM 82 CG1 ILE 5 -7.129 12.427 13.499 1.00 2.32 C ATOM 85 CG2 ILE 5 -4.804 13.473 13.589 1.00 2.32 C ATOM 89 CD1 ILE 5 -8.220 11.548 14.179 1.00 2.32 C ATOM 93 N VAL 6 -5.660 9.904 12.205 1.00 1.91 N ATOM 94 CA VAL 6 -5.454 9.387 10.900 1.00 0.76 C ATOM 95 C VAL 6 -6.388 10.197 9.957 1.00 0.52 C ATOM 96 O VAL 6 -6.171 11.422 9.858 1.00 0.46 O ATOM 97 CB VAL 6 -5.615 7.838 10.890 1.00 2.67 C ATOM 101 CG1 VAL 6 -4.872 7.151 12.085 1.00 2.32 C ATOM 102 CG2 VAL 6 -4.953 7.337 9.562 1.00 2.32 C ATOM 109 N GLY 7 -7.368 9.608 9.323 1.00 0.96 N ATOM 110 CA GLY 7 -8.292 10.375 8.572 1.00 0.71 C ATOM 111 C GLY 7 -9.514 9.536 8.109 1.00 0.48 C ATOM 112 O GLY 7 -9.502 8.292 8.258 1.00 0.53 O ATOM 116 N ALA 8 -10.514 10.174 7.551 1.00 0.39 N ATOM 117 CA ALA 8 -11.766 9.547 7.301 1.00 0.31 C ATOM 118 C ALA 8 -11.612 8.248 6.468 1.00 0.45 C ATOM 119 O ALA 8 -11.988 7.165 6.969 1.00 0.83 O ATOM 120 CB ALA 8 -12.737 10.549 6.605 1.00 0.52 C ATOM 126 N ASN 9 -10.976 8.328 5.336 1.00 0.40 N ATOM 127 CA ASN 9 -10.629 7.181 4.586 1.00 0.49 C ATOM 128 C ASN 9 -9.930 6.039 5.390 1.00 0.50 C ATOM 129 O ASN 9 -10.350 4.871 5.213 1.00 0.56 O ATOM 130 CB ASN 9 -9.704 7.638 3.418 1.00 0.68 C ATOM 131 CG ASN 9 -10.343 8.667 2.452 1.00 1.03 C ATOM 136 OD1 ASN 9 -9.675 9.127 1.556 1.00 2.32 O ATOM 137 ND2 ASN 9 -11.662 9.074 2.587 1.00 2.32 N ATOM 140 N ALA 10 -9.003 6.332 6.282 1.00 0.51 N ATOM 141 CA ALA 10 -8.398 5.288 7.017 1.00 0.49 C ATOM 142 C ALA 10 -9.445 4.639 7.942 1.00 0.46 C ATOM 143 O ALA 10 -9.558 3.401 7.908 1.00 0.45 O ATOM 144 CB ALA 10 -7.234 5.806 7.879 1.00 0.62 C ATOM 150 N GLY 11 -10.239 5.413 8.630 1.00 0.51 N ATOM 151 CA GLY 11 -11.317 4.882 9.376 1.00 0.44 C ATOM 152 C GLY 11 -12.237 3.944 8.554 1.00 0.38 C ATOM 153 O GLY 11 -12.414 2.788 8.984 1.00 0.47 O ATOM 157 N LYS 12 -12.720 4.363 7.411 1.00 0.36 N ATOM 158 CA LYS 12 -13.443 3.491 6.541 1.00 0.36 C ATOM 159 C LYS 12 -12.684 2.151 6.291 1.00 0.41 C ATOM 160 O LYS 12 -13.252 1.082 6.597 1.00 0.56 O ATOM 161 CB LYS 12 -13.731 4.204 5.181 1.00 0.34 C ATOM 162 CG LYS 12 -14.718 5.411 5.321 1.00 0.36 C ATOM 163 CD LYS 12 -14.685 6.325 4.051 1.00 0.33 C ATOM 164 CE LYS 12 -15.950 7.224 3.920 1.00 0.77 C ATOM 165 NZ LYS 12 -17.147 6.390 3.461 1.00 1.39 N ATOM 179 N VAL 13 -11.451 2.194 5.863 1.00 0.38 N ATOM 180 CA VAL 13 -10.691 1.004 5.690 1.00 0.36 C ATOM 181 C VAL 13 -10.657 0.114 6.959 1.00 0.36 C ATOM 182 O VAL 13 -11.130 -1.041 6.899 1.00 0.36 O ATOM 183 CB VAL 13 -9.243 1.367 5.210 1.00 0.38 C ATOM 184 CG1 VAL 13 -9.253 1.993 3.774 1.00 0.41 C ATOM 185 CG2 VAL 13 -8.242 0.173 5.234 1.00 0.40 C ATOM 195 N TRP 14 -10.201 0.652 8.052 1.00 0.42 N ATOM 196 CA TRP 14 -10.187 -0.024 9.297 1.00 0.37 C ATOM 197 C TRP 14 -11.542 -0.690 9.629 1.00 0.45 C ATOM 198 O TRP 14 -11.537 -1.905 9.896 1.00 0.73 O ATOM 199 CB TRP 14 -9.828 1.029 10.408 1.00 0.31 C ATOM 200 CG TRP 14 -8.568 0.853 11.236 1.00 1.46 C ATOM 205 CD1 TRP 14 -7.613 -0.161 11.260 1.00 2.32 C ATOM 206 CD2 TRP 14 -8.087 1.814 12.161 1.00 2.32 C ATOM 207 NE1 TRP 14 -6.684 0.106 12.209 1.00 2.32 N ATOM 208 CE2 TRP 14 -6.968 1.295 12.772 1.00 2.32 C ATOM 209 CE3 TRP 14 -8.603 3.064 12.525 1.00 2.32 C ATOM 210 CZ2 TRP 14 -6.325 1.969 13.810 1.00 2.32 C ATOM 211 CZ3 TRP 14 -7.946 3.781 13.541 1.00 2.32 C ATOM 212 CH2 TRP 14 -6.817 3.234 14.186 1.00 2.32 H ATOM 219 N HIS 15 -12.607 0.053 9.560 1.00 0.39 N ATOM 220 CA HIS 15 -13.891 -0.484 9.811 1.00 0.43 C ATOM 221 C HIS 15 -14.150 -1.771 8.983 1.00 0.46 C ATOM 222 O HIS 15 -14.466 -2.794 9.611 1.00 0.71 O ATOM 223 CB HIS 15 -14.949 0.634 9.550 1.00 0.35 C ATOM 224 CG HIS 15 -16.302 0.288 10.196 1.00 0.45 C ATOM 229 ND1 HIS 15 -17.548 0.102 9.495 1.00 2.32 N ATOM 230 CD2 HIS 15 -16.550 0.114 11.535 1.00 2.32 C ATOM 231 CE1 HIS 15 -18.475 -0.160 10.396 1.00 2.32 C ATOM 232 NE2 HIS 15 -17.961 -0.190 11.767 1.00 2.32 N ATOM 236 N ALA 16 -13.924 -1.777 7.695 1.00 0.36 N ATOM 237 CA ALA 16 -14.030 -2.988 6.956 1.00 0.37 C ATOM 238 C ALA 16 -13.035 -4.085 7.413 1.00 0.40 C ATOM 239 O ALA 16 -13.465 -5.229 7.676 1.00 0.42 O ATOM 240 CB ALA 16 -13.725 -2.745 5.457 1.00 0.47 C ATOM 246 N LEU 17 -11.775 -3.775 7.540 1.00 0.45 N ATOM 247 CA LEU 17 -10.849 -4.760 7.960 1.00 0.49 C ATOM 248 C LEU 17 -11.276 -5.410 9.303 1.00 0.57 C ATOM 249 O LEU 17 -11.450 -6.646 9.288 1.00 0.94 O ATOM 250 CB LEU 17 -9.416 -4.168 8.062 1.00 0.53 C ATOM 251 CG LEU 17 -8.765 -3.621 6.742 1.00 0.28 C ATOM 252 CD1 LEU 17 -7.432 -2.884 7.103 1.00 0.41 C ATOM 253 CD2 LEU 17 -8.462 -4.759 5.715 1.00 0.26 C ATOM 265 N ASN 18 -11.616 -4.663 10.321 1.00 0.45 N ATOM 266 CA ASN 18 -12.152 -5.205 11.528 1.00 0.62 C ATOM 267 C ASN 18 -13.438 -6.091 11.372 1.00 0.73 C ATOM 268 O ASN 18 -13.923 -6.589 12.404 1.00 0.97 O ATOM 269 CB ASN 18 -12.530 -4.020 12.488 1.00 0.54 C ATOM 270 CG ASN 18 -11.368 -3.044 12.811 1.00 0.54 C ATOM 275 OD1 ASN 18 -11.588 -2.077 13.503 1.00 2.32 O ATOM 276 ND2 ASN 18 -10.082 -3.244 12.330 1.00 2.32 N ATOM 279 N GLU 19 -13.958 -6.279 10.182 1.00 0.79 N ATOM 280 CA GLU 19 -15.092 -7.077 9.909 1.00 0.78 C ATOM 281 C GLU 19 -14.649 -8.218 8.952 1.00 0.85 C ATOM 282 O GLU 19 -15.335 -9.253 8.937 1.00 1.10 O ATOM 283 CB GLU 19 -16.229 -6.202 9.275 1.00 0.65 C ATOM 284 CG GLU 19 -16.721 -5.133 10.307 1.00 0.49 C ATOM 285 CD GLU 19 -17.646 -4.066 9.694 1.00 0.35 C ATOM 286 OE1 GLU 19 -17.922 -4.080 8.465 1.00 0.47 O ATOM 287 OE2 GLU 19 -18.126 -3.167 10.431 1.00 0.40 O ATOM 294 N ALA 20 -13.565 -8.071 8.220 1.00 0.64 N ATOM 295 CA ALA 20 -13.058 -9.105 7.392 1.00 0.54 C ATOM 296 C ALA 20 -11.616 -8.793 6.883 1.00 0.60 C ATOM 297 O ALA 20 -11.433 -8.695 5.650 1.00 1.64 O ATOM 298 CB ALA 20 -14.060 -9.440 6.243 1.00 0.87 C ATOM 304 N ASP 21 -10.638 -8.707 7.770 1.00 0.72 N ATOM 305 CA ASP 21 -9.238 -8.694 7.458 1.00 1.03 C ATOM 306 C ASP 21 -8.596 -9.310 6.164 1.00 1.23 C ATOM 307 O ASP 21 -7.387 -9.066 5.965 1.00 1.66 O ATOM 308 CB ASP 21 -8.473 -9.337 8.655 1.00 1.28 C ATOM 313 CG ASP 21 -8.471 -10.872 8.557 1.00 2.32 C ATOM 314 OD1 ASP 21 -7.382 -11.492 8.424 1.00 2.32 O ATOM 315 OD2 ASP 21 -9.557 -11.507 8.581 1.00 2.32 O ATOM 316 N GLY 22 -9.307 -10.058 5.362 1.00 1.27 N ATOM 317 CA GLY 22 -8.801 -10.619 4.174 1.00 1.67 C ATOM 318 C GLY 22 -9.563 -10.013 2.967 1.00 1.28 C ATOM 319 O GLY 22 -9.426 -10.558 1.855 1.00 1.06 O ATOM 323 N ILE 23 -10.327 -8.963 3.152 1.00 1.27 N ATOM 324 CA ILE 23 -10.958 -8.286 2.089 1.00 1.36 C ATOM 325 C ILE 23 -9.909 -7.866 1.019 1.00 1.21 C ATOM 326 O ILE 23 -8.959 -7.128 1.344 1.00 1.33 O ATOM 327 CB ILE 23 -11.777 -7.037 2.619 1.00 1.65 C ATOM 328 CG1 ILE 23 -13.132 -7.496 3.264 1.00 1.76 C ATOM 329 CD1 ILE 23 -13.778 -6.383 4.144 1.00 2.36 C ATOM 335 CG2 ILE 23 -12.129 -6.084 1.427 1.00 2.32 C ATOM 342 N SER 24 -10.098 -8.324 -0.189 1.00 1.13 N ATOM 343 CA SER 24 -9.270 -7.969 -1.273 1.00 0.94 C ATOM 344 C SER 24 -9.273 -6.441 -1.555 1.00 0.68 C ATOM 345 O SER 24 -10.342 -5.782 -1.514 1.00 0.61 O ATOM 346 CB SER 24 -9.697 -8.735 -2.561 1.00 0.99 C ATOM 351 OG SER 24 -9.663 -10.221 -2.322 1.00 2.32 O ATOM 353 N ILE 25 -8.131 -5.904 -1.874 1.00 0.61 N ATOM 354 CA ILE 25 -8.045 -4.544 -2.253 1.00 0.77 C ATOM 355 C ILE 25 -9.153 -4.146 -3.290 1.00 0.87 C ATOM 356 O ILE 25 -9.997 -3.342 -2.878 1.00 1.18 O ATOM 357 CB ILE 25 -6.537 -4.120 -2.519 1.00 0.94 C ATOM 358 CG1 ILE 25 -5.724 -5.068 -3.481 1.00 0.50 C ATOM 359 CG2 ILE 25 -5.790 -3.985 -1.141 1.00 0.83 C ATOM 368 CD1 ILE 25 -4.204 -4.731 -3.608 1.00 2.32 C ATOM 372 N PRO 26 -9.385 -4.747 -4.478 1.00 0.92 N ATOM 373 CA PRO 26 -10.569 -4.444 -5.348 1.00 1.26 C ATOM 374 C PRO 26 -11.995 -4.509 -4.719 1.00 1.22 C ATOM 375 O PRO 26 -12.946 -4.170 -5.451 1.00 1.84 O ATOM 376 CB PRO 26 -10.497 -5.498 -6.503 1.00 1.51 C ATOM 380 CG PRO 26 -9.654 -6.647 -5.908 1.00 2.32 C ATOM 383 CD PRO 26 -8.619 -5.864 -5.073 1.00 2.32 C ATOM 386 N GLU 27 -12.159 -4.856 -3.468 1.00 0.88 N ATOM 387 CA GLU 27 -13.437 -4.912 -2.858 1.00 0.91 C ATOM 388 C GLU 27 -13.496 -3.706 -1.915 1.00 0.69 C ATOM 389 O GLU 27 -14.429 -2.889 -2.040 1.00 0.61 O ATOM 390 CB GLU 27 -13.581 -6.228 -2.034 1.00 1.22 C ATOM 391 CG GLU 27 -13.752 -7.481 -2.948 1.00 1.58 C ATOM 398 CD GLU 27 -13.823 -8.764 -2.096 1.00 2.32 C ATOM 399 OE1 GLU 27 -14.844 -9.498 -2.146 1.00 2.32 O ATOM 400 OE2 GLU 27 -12.860 -9.083 -1.350 1.00 2.32 O ATOM 401 N LEU 28 -12.512 -3.563 -1.098 1.00 0.67 N ATOM 402 CA LEU 28 -12.382 -2.375 -0.347 1.00 0.65 C ATOM 403 C LEU 28 -12.466 -1.155 -1.279 1.00 0.65 C ATOM 404 O LEU 28 -13.405 -0.352 -1.126 1.00 0.91 O ATOM 405 CB LEU 28 -10.987 -2.272 0.383 1.00 0.94 C ATOM 406 CG LEU 28 -10.958 -2.557 1.918 1.00 0.39 C ATOM 407 CD1 LEU 28 -9.475 -2.685 2.400 1.00 1.03 C ATOM 408 CD2 LEU 28 -11.669 -1.417 2.705 1.00 0.53 C ATOM 420 N ALA 29 -11.587 -1.077 -2.237 1.00 0.61 N ATOM 421 CA ALA 29 -11.536 0.010 -3.136 1.00 0.77 C ATOM 422 C ALA 29 -12.911 0.493 -3.626 1.00 0.77 C ATOM 423 O ALA 29 -13.256 1.666 -3.352 1.00 0.85 O ATOM 424 CB ALA 29 -10.694 -0.432 -4.352 1.00 0.99 C ATOM 430 N ARG 30 -13.690 -0.381 -4.204 1.00 0.69 N ATOM 431 CA ARG 30 -15.022 -0.096 -4.561 1.00 0.59 C ATOM 432 C ARG 30 -15.728 0.545 -3.342 1.00 0.41 C ATOM 433 O ARG 30 -15.938 1.774 -3.393 1.00 0.70 O ATOM 434 CB ARG 30 -15.664 -1.440 -5.048 1.00 0.73 C ATOM 435 CG ARG 30 -17.012 -1.277 -5.817 1.00 0.90 C ATOM 442 CD ARG 30 -16.807 -0.677 -7.243 1.00 2.32 C ATOM 445 NE ARG 30 -17.962 -0.877 -8.025 1.00 2.32 N ATOM 447 CZ ARG 30 -18.027 -0.516 -9.370 1.00 2.32 C ATOM 448 NH1 ARG 30 -19.086 -0.843 -10.067 1.00 2.32 H ATOM 449 NH2 ARG 30 -17.053 0.141 -9.957 1.00 2.32 H ATOM 454 N LYS 31 -15.882 -0.156 -2.252 1.00 0.59 N ATOM 455 CA LYS 31 -16.627 0.339 -1.152 1.00 0.74 C ATOM 456 C LYS 31 -16.061 1.601 -0.414 1.00 0.62 C ATOM 457 O LYS 31 -16.759 2.068 0.503 1.00 0.55 O ATOM 458 CB LYS 31 -16.685 -0.789 -0.072 1.00 0.82 C ATOM 459 CG LYS 31 -17.203 -2.190 -0.564 1.00 0.66 C ATOM 460 CD LYS 31 -16.650 -3.337 0.353 1.00 0.72 C ATOM 461 CE LYS 31 -16.937 -4.760 -0.213 1.00 0.83 C ATOM 472 NZ LYS 31 -18.431 -5.084 -0.162 1.00 2.32 N ATOM 476 N VAL 32 -14.900 2.119 -0.744 1.00 0.85 N ATOM 477 CA VAL 32 -14.411 3.330 -0.168 1.00 0.81 C ATOM 478 C VAL 32 -14.365 4.422 -1.262 1.00 0.83 C ATOM 479 O VAL 32 -14.215 5.603 -0.912 1.00 0.94 O ATOM 480 CB VAL 32 -12.986 3.177 0.460 1.00 0.90 C ATOM 481 CG1 VAL 32 -13.030 2.171 1.656 1.00 0.89 C ATOM 482 CG2 VAL 32 -11.877 2.727 -0.540 1.00 0.90 C ATOM 492 N ASN 33 -14.451 4.053 -2.507 1.00 0.81 N ATOM 493 CA ASN 33 -14.419 4.943 -3.596 1.00 0.91 C ATOM 494 C ASN 33 -13.003 5.521 -3.858 1.00 0.74 C ATOM 495 O ASN 33 -12.888 6.730 -4.136 1.00 0.63 O ATOM 498 CB ASN 33 -15.598 5.981 -3.605 1.00 2.32 C ATOM 501 CG ASN 33 -16.970 5.304 -3.426 1.00 2.32 C ATOM 502 OD1 ASN 33 -17.243 4.744 -2.391 1.00 2.32 O ATOM 503 ND2 ASN 33 -17.900 5.324 -4.452 1.00 2.32 N ATOM 506 N LEU 34 -11.987 4.689 -3.769 1.00 0.76 N ATOM 507 CA LEU 34 -10.656 5.063 -4.126 1.00 0.78 C ATOM 508 C LEU 34 -10.067 3.998 -5.088 1.00 0.72 C ATOM 509 O LEU 34 -10.706 2.952 -5.319 1.00 0.66 O ATOM 510 CB LEU 34 -9.698 5.200 -2.891 1.00 1.10 C ATOM 511 CG LEU 34 -9.854 6.474 -1.980 1.00 1.18 C ATOM 512 CD1 LEU 34 -11.169 6.506 -1.137 1.00 1.48 C ATOM 513 CD2 LEU 34 -8.643 6.532 -0.991 1.00 1.76 C ATOM 525 N SER 35 -8.914 4.267 -5.642 1.00 0.85 N ATOM 526 CA SER 35 -8.205 3.295 -6.383 1.00 0.85 C ATOM 527 C SER 35 -7.500 2.286 -5.452 1.00 0.71 C ATOM 528 O SER 35 -6.821 2.698 -4.483 1.00 1.01 O ATOM 529 CB SER 35 -7.166 3.974 -7.324 1.00 1.17 C ATOM 530 OG SER 35 -6.155 4.760 -6.532 1.00 1.24 O ATOM 536 N VAL 36 -7.577 1.043 -5.820 1.00 0.69 N ATOM 537 CA VAL 36 -6.821 -0.010 -5.253 1.00 0.57 C ATOM 538 C VAL 36 -5.369 0.355 -4.846 1.00 0.50 C ATOM 539 O VAL 36 -5.023 0.095 -3.677 1.00 0.57 O ATOM 540 CB VAL 36 -6.884 -1.199 -6.268 1.00 0.45 C ATOM 541 CG2 VAL 36 -6.464 -2.561 -5.667 1.00 0.67 C ATOM 545 CG1 VAL 36 -6.073 -0.915 -7.578 1.00 2.32 C ATOM 552 N GLU 37 -4.602 1.008 -5.679 1.00 0.42 N ATOM 553 CA GLU 37 -3.326 1.484 -5.287 1.00 0.25 C ATOM 554 C GLU 37 -3.370 2.331 -3.986 1.00 0.34 C ATOM 555 O GLU 37 -2.651 1.980 -3.025 1.00 0.37 O ATOM 556 CB GLU 37 -2.734 2.384 -6.418 1.00 0.30 C ATOM 561 CG GLU 37 -2.572 1.634 -7.779 1.00 2.32 C ATOM 564 CD GLU 37 -2.033 2.587 -8.863 1.00 2.32 C ATOM 565 OE1 GLU 37 -0.925 2.355 -9.415 1.00 2.32 O ATOM 566 OE2 GLU 37 -2.703 3.597 -9.204 1.00 2.32 O ATOM 567 N SER 38 -4.210 3.333 -3.914 1.00 0.53 N ATOM 568 CA SER 38 -4.219 4.190 -2.796 1.00 0.50 C ATOM 569 C SER 38 -4.648 3.425 -1.527 1.00 0.59 C ATOM 570 O SER 38 -3.939 3.513 -0.506 1.00 0.87 O ATOM 571 CB SER 38 -5.237 5.329 -3.042 1.00 0.64 C ATOM 576 OG SER 38 -4.827 6.148 -4.236 1.00 2.32 O ATOM 578 N THR 39 -5.687 2.646 -1.613 1.00 0.54 N ATOM 579 CA THR 39 -6.030 1.768 -0.554 1.00 0.60 C ATOM 580 C THR 39 -4.828 0.883 -0.119 1.00 0.55 C ATOM 581 O THR 39 -4.492 0.906 1.080 1.00 0.60 O ATOM 582 CB THR 39 -7.210 0.865 -1.017 1.00 0.63 C ATOM 586 OG1 THR 39 -8.385 1.722 -1.414 1.00 2.32 O ATOM 588 CG2 THR 39 -7.673 -0.144 0.075 1.00 2.32 C ATOM 592 N ALA 40 -4.170 0.208 -1.020 1.00 0.48 N ATOM 593 CA ALA 40 -3.033 -0.565 -0.692 1.00 0.44 C ATOM 594 C ALA 40 -1.953 0.260 0.070 1.00 0.45 C ATOM 595 O ALA 40 -1.596 -0.155 1.191 1.00 0.41 O ATOM 596 CB ALA 40 -2.450 -1.175 -2.001 1.00 0.37 C ATOM 602 N LEU 41 -1.569 1.374 -0.415 1.00 0.49 N ATOM 603 CA LEU 41 -0.743 2.261 0.336 1.00 0.47 C ATOM 604 C LEU 41 -1.313 2.528 1.766 1.00 0.64 C ATOM 605 O LEU 41 -0.589 2.249 2.743 1.00 1.07 O ATOM 606 CB LEU 41 -0.559 3.624 -0.432 1.00 0.55 C ATOM 607 CG LEU 41 0.627 3.668 -1.461 1.00 0.85 C ATOM 608 CD1 LEU 41 0.776 5.118 -2.029 1.00 1.40 C ATOM 613 CD2 LEU 41 0.452 2.671 -2.651 1.00 2.32 C ATOM 621 N ALA 42 -2.546 2.946 1.897 1.00 0.43 N ATOM 622 CA ALA 42 -3.146 3.169 3.165 1.00 0.59 C ATOM 623 C ALA 42 -3.040 1.965 4.134 1.00 0.65 C ATOM 624 O ALA 42 -2.463 2.123 5.230 1.00 0.74 O ATOM 625 CB ALA 42 -4.658 3.525 2.947 1.00 0.64 C ATOM 631 N VAL 43 -3.498 0.819 3.724 1.00 0.63 N ATOM 632 CA VAL 43 -3.391 -0.357 4.502 1.00 0.59 C ATOM 633 C VAL 43 -1.918 -0.649 4.886 1.00 0.59 C ATOM 634 O VAL 43 -1.651 -0.831 6.090 1.00 0.54 O ATOM 635 CB VAL 43 -4.018 -1.571 3.702 1.00 0.56 C ATOM 636 CG1 VAL 43 -5.538 -1.360 3.404 1.00 0.58 C ATOM 637 CG2 VAL 43 -3.838 -2.925 4.465 1.00 0.64 C ATOM 647 N GLY 44 -1.004 -0.605 3.959 1.00 0.61 N ATOM 648 CA GLY 44 0.367 -0.707 4.281 1.00 0.59 C ATOM 649 C GLY 44 0.800 0.272 5.400 1.00 0.66 C ATOM 650 O GLY 44 1.286 -0.215 6.439 1.00 0.93 O ATOM 654 N TRP 45 0.554 1.546 5.255 1.00 0.60 N ATOM 655 CA TRP 45 0.820 2.498 6.282 1.00 0.79 C ATOM 656 C TRP 45 0.224 2.071 7.663 1.00 0.88 C ATOM 657 O TRP 45 0.999 1.966 8.633 1.00 1.07 O ATOM 658 CB TRP 45 0.253 3.900 5.838 1.00 0.74 C ATOM 659 CG TRP 45 1.204 5.082 5.758 1.00 0.72 C ATOM 664 CD1 TRP 45 2.499 5.228 6.262 1.00 2.32 C ATOM 665 CD2 TRP 45 0.904 6.284 5.131 1.00 2.32 C ATOM 666 NE1 TRP 45 2.955 6.464 5.943 1.00 2.32 N ATOM 667 CE2 TRP 45 1.999 7.112 5.254 1.00 2.32 C ATOM 668 CE3 TRP 45 -0.252 6.695 4.458 1.00 2.32 C ATOM 669 CZ2 TRP 45 2.007 8.399 4.710 1.00 2.32 C ATOM 670 CZ3 TRP 45 -0.266 7.986 3.900 1.00 2.32 C ATOM 671 CH2 TRP 45 0.856 8.832 4.025 1.00 2.32 H ATOM 678 N LEU 46 -1.042 1.764 7.730 1.00 0.77 N ATOM 679 CA LEU 46 -1.655 1.313 8.933 1.00 0.84 C ATOM 680 C LEU 46 -1.059 0.001 9.547 1.00 0.89 C ATOM 681 O LEU 46 -0.955 -0.089 10.792 1.00 0.92 O ATOM 682 CB LEU 46 -3.148 1.025 8.624 1.00 0.93 C ATOM 683 CG LEU 46 -4.031 2.281 8.314 1.00 1.17 C ATOM 688 CD1 LEU 46 -5.391 1.841 7.677 1.00 2.32 C ATOM 689 CD2 LEU 46 -4.325 3.086 9.617 1.00 2.32 C ATOM 697 N ALA 47 -0.691 -0.968 8.756 1.00 0.94 N ATOM 698 CA ALA 47 0.049 -2.074 9.247 1.00 0.92 C ATOM 699 C ALA 47 1.426 -1.606 9.781 1.00 0.90 C ATOM 700 O ALA 47 1.672 -1.835 10.981 1.00 0.93 O ATOM 701 CB ALA 47 0.199 -3.154 8.144 1.00 0.96 C ATOM 707 N ARG 48 2.189 -0.950 9.035 1.00 0.98 N ATOM 708 CA ARG 48 3.451 -0.447 9.456 1.00 1.07 C ATOM 709 C ARG 48 3.356 0.262 10.827 1.00 1.23 C ATOM 710 O ARG 48 3.994 -0.223 11.780 1.00 1.61 O ATOM 711 CB ARG 48 4.037 0.539 8.378 1.00 1.00 C ATOM 712 CG ARG 48 4.499 -0.217 7.092 1.00 0.98 C ATOM 713 CD ARG 48 4.798 0.786 5.931 1.00 0.89 C ATOM 722 NE ARG 48 5.443 0.154 4.848 1.00 2.32 N ATOM 724 CZ ARG 48 4.821 -0.759 3.995 1.00 2.32 C ATOM 725 NH1 ARG 48 5.527 -1.318 3.047 1.00 2.32 H ATOM 726 NH2 ARG 48 3.551 -1.068 4.108 1.00 2.32 H ATOM 731 N GLU 49 2.544 1.270 10.955 1.00 1.04 N ATOM 732 CA GLU 49 2.403 1.963 12.183 1.00 1.12 C ATOM 733 C GLU 49 1.818 1.147 13.377 1.00 1.16 C ATOM 734 O GLU 49 1.729 1.728 14.474 1.00 1.15 O ATOM 735 CB GLU 49 1.471 3.188 11.911 1.00 1.05 C ATOM 736 CG GLU 49 2.013 4.216 10.863 1.00 0.99 C ATOM 743 CD GLU 49 3.121 5.118 11.441 1.00 2.32 C ATOM 744 OE1 GLU 49 4.231 4.626 11.774 1.00 2.32 O ATOM 745 OE2 GLU 49 2.921 6.355 11.570 1.00 2.32 O ATOM 746 N ASN 50 1.429 -0.089 13.205 1.00 1.16 N ATOM 747 CA ASN 50 0.693 -0.813 14.168 1.00 1.13 C ATOM 748 C ASN 50 -0.598 -0.068 14.583 1.00 0.78 C ATOM 749 O ASN 50 -0.828 0.149 15.788 1.00 0.91 O ATOM 752 CB ASN 50 1.604 -1.225 15.379 1.00 2.32 C ATOM 755 CG ASN 50 1.021 -2.423 16.163 1.00 2.32 C ATOM 756 OD1 ASN 50 -0.058 -2.336 16.700 1.00 2.32 O ATOM 757 ND2 ASN 50 1.736 -3.604 16.259 1.00 2.32 N ATOM 760 N LYS 51 -1.392 0.278 13.614 1.00 0.99 N ATOM 761 CA LYS 51 -2.767 0.497 13.842 1.00 0.95 C ATOM 762 C LYS 51 -3.479 -0.860 13.576 1.00 0.94 C ATOM 763 O LYS 51 -4.582 -1.057 14.118 1.00 1.10 O ATOM 764 CB LYS 51 -3.310 1.586 12.839 1.00 0.89 C ATOM 769 CG LYS 51 -3.485 3.029 13.424 1.00 2.32 C ATOM 772 CD LYS 51 -2.162 3.821 13.689 1.00 2.32 C ATOM 775 CE LYS 51 -1.598 3.598 15.124 1.00 2.32 C ATOM 778 NZ LYS 51 -0.441 4.559 15.401 1.00 2.32 N ATOM 782 N VAL 52 -2.908 -1.728 12.778 1.00 1.09 N ATOM 783 CA VAL 52 -3.521 -2.963 12.428 1.00 0.94 C ATOM 784 C VAL 52 -2.707 -4.185 12.965 1.00 1.50 C ATOM 785 O VAL 52 -1.467 -4.183 12.844 1.00 1.58 O ATOM 786 CB VAL 52 -3.646 -3.032 10.875 1.00 0.65 C ATOM 787 CG1 VAL 52 -4.789 -2.078 10.395 1.00 0.73 C ATOM 788 CG2 VAL 52 -3.939 -4.469 10.324 1.00 0.67 C ATOM 798 N VAL 53 -3.383 -5.210 13.442 1.00 2.04 N ATOM 799 CA VAL 53 -2.773 -6.429 13.865 1.00 2.81 C ATOM 800 C VAL 53 -3.850 -7.624 13.693 1.00 3.59 C ATOM 801 O VAL 53 -4.172 -7.940 12.546 1.00 5.01 O ATOM 802 CB VAL 53 -2.113 -6.287 15.314 1.00 2.32 C ATOM 806 CG1 VAL 53 -3.090 -5.658 16.364 1.00 2.32 C ATOM 807 CG2 VAL 53 -1.520 -7.624 15.865 1.00 2.32 C ATOM 814 N ILE 54 -4.431 -8.347 14.743 1.00 3.38 N ATOM 815 CA ILE 54 -5.017 -9.676 14.599 1.00 3.99 C ATOM 816 C ILE 54 -6.562 -9.841 15.039 1.00 4.54 C ATOM 817 O ILE 54 -7.191 -8.802 15.303 1.00 4.17 O ATOM 818 CB ILE 54 -4.057 -10.683 15.363 1.00 3.42 C ATOM 822 CG1 ILE 54 -4.006 -12.110 14.693 1.00 2.32 C ATOM 825 CG2 ILE 54 -4.405 -10.753 16.891 1.00 2.32 C ATOM 829 CD1 ILE 54 -3.043 -13.105 15.410 1.00 2.32 C ATOM 833 N GLU 55 -7.144 -11.053 15.114 1.00 5.51 N ATOM 834 CA GLU 55 -8.571 -11.307 15.162 1.00 5.90 C ATOM 835 C GLU 55 -9.093 -12.093 16.536 1.00 6.75 C ATOM 836 O GLU 55 -8.975 -11.424 17.578 1.00 8.15 O ATOM 837 CB GLU 55 -8.973 -12.075 13.856 1.00 6.53 C ATOM 838 CG GLU 55 -8.601 -11.455 12.487 1.00 6.05 C ATOM 839 CD GLU 55 -8.994 -12.507 11.430 1.00 7.14 C ATOM 846 OE1 GLU 55 -8.100 -13.125 10.794 1.00 2.32 O ATOM 847 OE2 GLU 55 -10.207 -12.783 11.234 1.00 2.32 O ATOM 848 N ARG 56 -9.642 -13.355 16.614 1.00 9.74 N ATOM 849 CA ARG 56 -10.630 -13.782 17.646 1.00 9.28 C ATOM 850 C ARG 56 -10.637 -15.237 18.421 1.00 9.36 C ATOM 851 O ARG 56 -10.439 -16.243 17.715 1.00 9.69 O ATOM 852 CB ARG 56 -12.000 -13.794 16.846 1.00 9.03 C ATOM 853 CG ARG 56 -13.303 -14.011 17.723 1.00 7.10 C ATOM 854 CD ARG 56 -14.231 -15.173 17.220 1.00 5.26 C ATOM 863 NE ARG 56 -15.168 -15.535 18.216 1.00 2.32 N ATOM 865 CZ ARG 56 -16.079 -16.586 18.075 1.00 2.32 C ATOM 866 NH1 ARG 56 -16.151 -17.305 16.978 1.00 2.32 H ATOM 867 NH2 ARG 56 -16.886 -16.873 19.068 1.00 2.32 H ATOM 872 N LYS 57 -10.957 -15.358 19.752 1.00 9.39 N ATOM 873 CA LYS 57 -11.799 -16.402 20.400 1.00 9.42 C ATOM 874 C LYS 57 -11.381 -17.042 21.811 1.00 9.66 C ATOM 875 O LYS 57 -10.290 -17.641 21.873 1.00 10.71 O ATOM 876 CB LYS 57 -12.276 -17.653 19.539 1.00 9.17 C ATOM 881 CG LYS 57 -13.574 -18.339 20.127 1.00 2.32 C ATOM 884 CD LYS 57 -14.114 -19.559 19.307 1.00 2.32 C ATOM 887 CE LYS 57 -15.351 -20.203 20.023 1.00 2.32 C ATOM 890 NZ LYS 57 -15.891 -21.403 19.240 1.00 2.32 N ATOM 894 N ASN 58 -12.253 -17.015 22.838 1.00 9.12 N ATOM 895 CA ASN 58 -12.556 -18.119 23.742 1.00 8.49 C ATOM 896 C ASN 58 -12.507 -17.792 25.293 1.00 7.84 C ATOM 897 O ASN 58 -11.914 -16.760 25.655 1.00 9.31 O ATOM 898 CB ASN 58 -11.824 -19.497 23.483 1.00 8.58 C ATOM 899 CG ASN 58 -12.649 -20.704 24.003 1.00 8.13 C ATOM 900 OD1 ASN 58 -13.746 -20.925 23.546 1.00 7.83 O ATOM 901 ND2 ASN 58 -12.156 -21.565 25.010 1.00 8.10 N ATOM 908 N GLY 59 -13.093 -18.639 26.178 1.00 4.99 N ATOM 909 CA GLY 59 -12.887 -18.580 27.601 1.00 5.59 C ATOM 910 C GLY 59 -14.185 -18.682 28.481 1.00 4.22 C ATOM 911 O GLY 59 -15.280 -18.745 27.898 1.00 3.45 O ATOM 915 CA LEU 60 -15.209 -18.837 30.685 1.00 2.32 C ATOM 916 N LEU 60 -14.077 -18.726 29.807 1.00 2.32 N ATOM 919 C LEU 60 -15.173 -17.835 31.895 1.00 2.32 C ATOM 920 O LEU 60 -16.059 -16.959 31.933 1.00 2.32 O ATOM 921 CB LEU 60 -15.374 -20.301 31.249 1.00 2.32 C ATOM 924 CG LEU 60 -16.761 -20.542 31.969 1.00 2.32 C ATOM 925 CD1 LEU 60 -17.904 -20.851 30.945 1.00 2.32 C ATOM 926 CD2 LEU 60 -16.679 -21.710 33.005 1.00 2.32 C ATOM 934 N ILE 61 -14.282 -17.983 32.857 1.00 6.12 N ATOM 935 CA ILE 61 -14.437 -17.385 34.155 1.00 6.10 C ATOM 936 C ILE 61 -13.313 -16.322 34.437 1.00 6.19 C ATOM 937 O ILE 61 -12.343 -16.266 33.655 1.00 5.89 O ATOM 938 CB ILE 61 -14.537 -18.534 35.243 1.00 5.84 C ATOM 939 CG1 ILE 61 -14.854 -17.976 36.681 1.00 5.68 C ATOM 940 CG2 ILE 61 -13.246 -19.424 35.267 1.00 7.22 C ATOM 949 CD1 ILE 61 -15.310 -19.071 37.695 1.00 2.32 C ATOM 953 N GLU 62 -13.466 -15.485 35.447 1.00 0.92 N ATOM 954 CA GLU 62 -12.770 -14.239 35.552 1.00 0.90 C ATOM 955 C GLU 62 -12.034 -14.122 36.947 1.00 0.77 C ATOM 956 O GLU 62 -12.750 -14.215 37.960 1.00 0.71 O ATOM 957 CB GLU 62 -13.831 -13.079 35.379 1.00 0.91 C ATOM 958 CG GLU 62 -14.570 -13.164 34.004 1.00 1.40 C ATOM 965 CD GLU 62 -15.582 -12.013 33.849 1.00 2.32 C ATOM 966 OE1 GLU 62 -15.183 -10.820 33.845 1.00 2.32 O ATOM 967 OE2 GLU 62 -16.809 -12.265 33.723 1.00 2.32 O ATOM 968 N ILE 63 -10.712 -13.943 37.029 1.00 0.70 N ATOM 969 CA ILE 63 -9.999 -13.960 38.290 1.00 0.62 C ATOM 970 C ILE 63 -8.930 -12.792 38.505 1.00 1.21 C ATOM 971 O ILE 63 -9.293 -11.657 38.141 1.00 0.22 O ATOM 972 CB ILE 63 -9.462 -15.422 38.560 1.00 0.86 C ATOM 973 CG1 ILE 63 -9.094 -15.654 40.078 1.00 0.95 C ATOM 974 CG2 ILE 63 -8.303 -15.829 37.589 1.00 1.67 C ATOM 983 CD1 ILE 63 -8.939 -17.155 40.464 1.00 2.32 C ATOM 987 N TYR 64 -7.743 -12.972 39.110 1.00 6.36 N ATOM 988 CA TYR 64 -7.039 -11.874 39.740 1.00 6.50 C ATOM 989 C TYR 64 -5.599 -12.154 40.369 1.00 6.16 C ATOM 990 O TYR 64 -5.519 -12.992 41.288 1.00 5.49 O ATOM 991 CB TYR 64 -7.910 -11.338 40.940 1.00 6.45 C ATOM 992 CG TYR 64 -7.441 -9.981 41.446 1.00 5.19 C ATOM 997 CD1 TYR 64 -7.670 -8.831 40.671 1.00 2.32 C ATOM 998 CD2 TYR 64 -6.806 -9.858 42.695 1.00 2.32 C ATOM 1001 CE1 TYR 64 -7.278 -7.535 41.094 1.00 2.32 C ATOM 1002 CE2 TYR 64 -6.408 -8.549 43.118 1.00 2.32 C ATOM 1005 CZ TYR 64 -6.648 -7.409 42.339 1.00 2.32 C ATOM 1006 OH TYR 64 -6.293 -6.232 42.776 1.00 2.32 H ATOM 1008 N ASN 65 -4.558 -11.389 39.958 1.00 6.54 N ATOM 1009 CA ASN 65 -3.559 -10.890 40.885 1.00 5.76 C ATOM 1010 C ASN 65 -2.797 -9.688 40.190 1.00 7.42 C ATOM 1011 O ASN 65 -3.521 -8.735 39.859 1.00 8.23 O ATOM 1012 CB ASN 65 -2.579 -11.920 41.601 1.00 5.04 C ATOM 1017 CG ASN 65 -1.906 -11.241 42.816 1.00 2.32 C ATOM 1018 OD1 ASN 65 -2.581 -10.857 43.743 1.00 2.32 O ATOM 1019 ND2 ASN 65 -0.535 -11.061 42.854 1.00 2.32 N ATOM 1022 N GLU 66 -1.485 -9.656 39.952 1.00 12.07 N ATOM 1023 CA GLU 66 -0.877 -8.474 39.390 1.00 10.67 C ATOM 1024 C GLU 66 0.471 -8.672 38.596 1.00 9.39 C ATOM 1025 O GLU 66 0.478 -8.318 37.397 1.00 8.57 O ATOM 1026 CB GLU 66 -0.723 -7.351 40.492 1.00 11.10 C ATOM 1031 CG GLU 66 0.081 -6.086 40.038 1.00 2.32 C ATOM 1034 CD GLU 66 -0.504 -5.429 38.773 1.00 2.32 C ATOM 1035 OE1 GLU 66 0.202 -5.313 37.737 1.00 2.32 O ATOM 1036 OE2 GLU 66 -1.688 -4.998 38.776 1.00 2.32 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 493 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 53.28 70.6 126 100.0 126 ARMSMC SECONDARY STRUCTURE . . 47.42 74.0 96 100.0 96 ARMSMC SURFACE . . . . . . . . 59.02 64.4 90 100.0 90 ARMSMC BURIED . . . . . . . . 35.01 86.1 36 100.0 36 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.09 39.2 51 100.0 51 ARMSSC1 RELIABLE SIDE CHAINS . 82.94 36.4 44 100.0 44 ARMSSC1 SECONDARY STRUCTURE . . 81.68 39.5 38 100.0 38 ARMSSC1 SURFACE . . . . . . . . 87.32 32.4 37 100.0 37 ARMSSC1 BURIED . . . . . . . . 66.32 57.1 14 100.0 14 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.24 27.5 40 100.0 40 ARMSSC2 RELIABLE SIDE CHAINS . 81.94 33.3 27 100.0 27 ARMSSC2 SECONDARY STRUCTURE . . 87.11 27.6 29 100.0 29 ARMSSC2 SURFACE . . . . . . . . 93.42 25.0 32 100.0 32 ARMSSC2 BURIED . . . . . . . . 97.47 37.5 8 100.0 8 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.93 43.8 16 100.0 16 ARMSSC3 RELIABLE SIDE CHAINS . 71.93 43.8 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 72.74 36.4 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 71.93 43.8 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 99.69 22.2 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 99.69 22.2 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 97.58 16.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 99.69 22.2 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.58 (Number of atoms: 64) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.58 64 100.0 64 CRMSCA CRN = ALL/NP . . . . . 0.1654 CRMSCA SECONDARY STRUCTURE . . 10.43 48 100.0 48 CRMSCA SURFACE . . . . . . . . 10.79 46 100.0 46 CRMSCA BURIED . . . . . . . . 10.04 18 100.0 18 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.62 315 100.0 315 CRMSMC SECONDARY STRUCTURE . . 10.50 237 100.0 237 CRMSMC SURFACE . . . . . . . . 10.88 225 100.0 225 CRMSMC BURIED . . . . . . . . 9.94 90 100.0 90 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.38 237 31.5 752 CRMSSC RELIABLE SIDE CHAINS . 12.70 195 27.5 710 CRMSSC SECONDARY STRUCTURE . . 12.69 181 31.2 580 CRMSSC SURFACE . . . . . . . . 12.42 177 32.6 543 CRMSSC BURIED . . . . . . . . 12.26 60 28.7 209 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.46 493 48.9 1008 CRMSALL SECONDARY STRUCTURE . . 11.54 373 48.3 772 CRMSALL SURFACE . . . . . . . . 11.64 361 49.7 727 CRMSALL BURIED . . . . . . . . 10.96 132 47.0 281 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.121 0.717 0.366 64 100.0 64 ERRCA SECONDARY STRUCTURE . . 6.966 0.729 0.374 48 100.0 48 ERRCA SURFACE . . . . . . . . 7.298 0.694 0.357 46 100.0 46 ERRCA BURIED . . . . . . . . 6.669 0.778 0.389 18 100.0 18 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.077 0.705 0.361 315 100.0 315 ERRMC SECONDARY STRUCTURE . . 6.924 0.714 0.368 237 100.0 237 ERRMC SURFACE . . . . . . . . 7.280 0.683 0.353 225 100.0 225 ERRMC BURIED . . . . . . . . 6.571 0.761 0.381 90 100.0 90 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.159 0.638 0.321 237 31.5 752 ERRSC RELIABLE SIDE CHAINS . 8.512 0.648 0.326 195 27.5 710 ERRSC SECONDARY STRUCTURE . . 8.361 0.656 0.330 181 31.2 580 ERRSC SURFACE . . . . . . . . 8.281 0.618 0.311 177 32.6 543 ERRSC BURIED . . . . . . . . 7.798 0.698 0.349 60 28.7 209 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.585 0.675 0.343 493 48.9 1008 ERRALL SECONDARY STRUCTURE . . 7.575 0.686 0.350 373 48.3 772 ERRALL SURFACE . . . . . . . . 7.766 0.653 0.333 361 49.7 727 ERRALL BURIED . . . . . . . . 7.092 0.735 0.367 132 47.0 281 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 5 12 51 64 64 DISTCA CA (P) 0.00 0.00 7.81 18.75 79.69 64 DISTCA CA (RMS) 0.00 0.00 2.59 3.58 6.33 DISTCA ALL (N) 0 2 29 94 363 493 1008 DISTALL ALL (P) 0.00 0.20 2.88 9.33 36.01 1008 DISTALL ALL (RMS) 0.00 1.67 2.61 3.88 6.39 DISTALL END of the results output