####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 64 ( 493), selected 64 , name T0560TS314_1-D1 # Molecule2: number of CA atoms 64 ( 1008), selected 64 , name T0560-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0560TS314_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 64 3 - 66 3.28 3.28 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 50 9 - 58 1.97 3.55 LCS_AVERAGE: 64.23 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 31 - 53 0.99 3.90 LCS_AVERAGE: 21.66 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 64 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 3 K 3 3 3 64 0 3 3 3 3 8 23 32 48 56 60 63 63 64 64 64 64 64 64 64 LCS_GDT K 4 K 4 3 3 64 3 3 3 3 3 4 26 30 48 55 58 63 63 64 64 64 64 64 64 64 LCS_GDT I 5 I 5 3 5 64 3 3 3 4 7 16 37 48 54 58 60 63 63 64 64 64 64 64 64 64 LCS_GDT V 6 V 6 3 5 64 3 3 4 6 11 13 18 24 34 39 53 63 63 64 64 64 64 64 64 64 LCS_GDT G 7 G 7 3 5 64 3 3 4 4 13 18 20 27 35 54 55 60 62 64 64 64 64 64 64 64 LCS_GDT A 8 A 8 3 49 64 3 3 5 7 11 18 33 51 55 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT N 9 N 9 12 50 64 8 15 28 39 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT A 10 A 10 12 50 64 8 15 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT G 11 G 11 12 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT K 12 K 12 12 50 64 8 19 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT V 13 V 13 12 50 64 8 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT W 14 W 14 12 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT H 15 H 15 12 50 64 8 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT A 16 A 16 12 50 64 4 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT L 17 L 17 12 50 64 4 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT N 18 N 18 12 50 64 4 11 16 36 44 48 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT E 19 E 19 12 50 64 8 11 22 38 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT A 20 A 20 12 50 64 5 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT D 21 D 21 4 50 64 3 3 4 7 13 44 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT G 22 G 22 12 50 64 3 12 29 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT I 23 I 23 12 50 64 4 11 28 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT S 24 S 24 12 50 64 6 13 27 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT I 25 I 25 12 50 64 6 19 30 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT P 26 P 26 12 50 64 6 17 27 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT E 27 E 27 12 50 64 5 19 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT L 28 L 28 12 50 64 7 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT A 29 A 29 12 50 64 6 17 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT R 30 R 30 12 50 64 5 14 28 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT K 31 K 31 23 50 64 6 17 30 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT V 32 V 32 23 50 64 5 11 21 35 44 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT N 33 N 33 23 50 64 3 13 29 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT L 34 L 34 23 50 64 5 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT S 35 S 35 23 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT V 36 V 36 23 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT E 37 E 37 23 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT S 38 S 38 23 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT T 39 T 39 23 50 64 8 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT A 40 A 40 23 50 64 5 17 30 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT L 41 L 41 23 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT A 42 A 42 23 50 64 6 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT V 43 V 43 23 50 64 6 17 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT G 44 G 44 23 50 64 6 22 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT W 45 W 45 23 50 64 6 21 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT L 46 L 46 23 50 64 6 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT A 47 A 47 23 50 64 6 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT R 48 R 48 23 50 64 6 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT E 49 E 49 23 50 64 4 15 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT N 50 N 50 23 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT K 51 K 51 23 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT V 52 V 52 23 50 64 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT V 53 V 53 23 50 64 6 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT I 54 I 54 21 50 64 3 5 20 35 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT E 55 E 55 6 50 64 3 4 12 29 44 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT R 56 R 56 4 50 64 3 4 16 25 37 48 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT K 57 K 57 4 50 64 3 6 17 37 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT N 58 N 58 4 50 64 3 3 4 7 11 21 35 48 55 59 59 63 63 64 64 64 64 64 64 64 LCS_GDT G 59 G 59 4 8 64 3 3 4 7 11 21 26 43 55 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT L 60 L 60 6 8 64 5 5 7 7 13 36 45 54 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT I 61 I 61 6 8 64 5 5 7 14 38 48 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT E 62 E 62 6 8 64 5 5 16 25 44 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT I 63 I 63 6 8 64 5 5 7 9 38 48 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT Y 64 Y 64 6 7 64 5 5 7 27 44 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT N 65 N 65 6 7 64 3 4 7 7 15 21 47 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_GDT E 66 E 66 5 7 64 1 4 8 36 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 LCS_AVERAGE LCS_A: 61.96 ( 21.66 64.23 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 23 31 40 45 49 52 55 56 59 60 63 63 64 64 64 64 64 64 64 GDT PERCENT_AT 15.62 35.94 48.44 62.50 70.31 76.56 81.25 85.94 87.50 92.19 93.75 98.44 98.44 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.37 0.75 1.02 1.33 1.54 1.72 1.86 2.05 2.14 2.51 2.78 3.13 3.13 3.28 3.28 3.28 3.28 3.28 3.28 3.28 GDT RMS_ALL_AT 3.59 3.66 3.64 3.62 3.56 3.56 3.57 3.55 3.53 3.45 3.32 3.28 3.28 3.28 3.28 3.28 3.28 3.28 3.28 3.28 # Checking swapping # possible swapping detected: E 19 E 19 # possible swapping detected: E 27 E 27 # possible swapping detected: E 55 E 55 # possible swapping detected: E 62 E 62 # possible swapping detected: E 66 E 66 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA K 3 K 3 9.452 0 0.573 0.668 12.982 5.833 3.862 LGA K 4 K 4 8.325 0 0.638 1.064 15.933 5.833 2.593 LGA I 5 I 5 7.905 0 0.584 0.969 8.967 7.857 6.131 LGA V 6 V 6 10.411 0 0.655 0.564 14.650 1.190 0.680 LGA G 7 G 7 9.905 0 0.608 0.608 10.123 4.643 4.643 LGA A 8 A 8 7.074 0 0.593 0.602 8.290 20.833 17.619 LGA N 9 N 9 2.129 0 0.583 1.018 4.251 61.905 57.857 LGA A 10 A 10 1.123 0 0.091 0.086 1.470 85.952 85.048 LGA G 11 G 11 0.787 0 0.068 0.068 0.948 90.476 90.476 LGA K 12 K 12 1.467 0 0.046 0.943 7.383 81.429 57.566 LGA V 13 V 13 0.682 0 0.055 1.186 2.710 95.238 84.762 LGA W 14 W 14 0.361 0 0.099 0.400 1.275 95.238 91.258 LGA H 15 H 15 1.403 0 0.054 0.133 3.728 81.548 65.667 LGA A 16 A 16 0.592 0 0.143 0.136 0.790 92.857 92.381 LGA L 17 L 17 1.629 0 0.063 1.131 2.937 73.214 68.036 LGA N 18 N 18 3.233 0 0.040 0.990 4.469 52.024 49.464 LGA E 19 E 19 2.471 0 0.064 0.794 3.541 66.786 62.434 LGA A 20 A 20 1.106 0 0.250 0.310 3.032 71.429 73.429 LGA D 21 D 21 3.950 0 0.415 0.885 6.752 55.714 35.952 LGA G 22 G 22 1.523 0 0.610 0.610 3.368 65.119 65.119 LGA I 23 I 23 1.737 0 0.121 0.627 1.894 77.143 79.464 LGA S 24 S 24 1.373 0 0.093 0.097 1.698 83.690 80.079 LGA I 25 I 25 1.102 0 0.101 1.043 3.211 81.429 75.357 LGA P 26 P 26 1.771 0 0.066 0.109 2.276 77.143 72.993 LGA E 27 E 27 0.830 0 0.048 1.263 6.199 92.976 68.624 LGA L 28 L 28 0.588 0 0.058 1.235 4.068 90.595 77.679 LGA A 29 A 29 1.615 0 0.088 0.083 2.101 72.976 72.952 LGA R 30 R 30 2.037 0 0.093 1.373 5.738 68.810 57.186 LGA K 31 K 31 1.828 0 0.039 1.105 3.829 66.905 65.238 LGA V 32 V 32 2.931 0 0.655 1.039 4.955 48.929 52.245 LGA N 33 N 33 2.347 0 0.356 0.555 4.735 64.881 56.905 LGA L 34 L 34 1.495 0 0.082 1.422 4.416 77.143 67.560 LGA S 35 S 35 1.443 0 0.065 0.696 2.151 79.286 77.222 LGA V 36 V 36 1.752 0 0.075 1.058 4.086 72.857 64.490 LGA E 37 E 37 1.939 0 0.072 0.769 5.702 72.857 55.767 LGA S 38 S 38 1.302 0 0.082 0.726 1.823 81.548 80.079 LGA T 39 T 39 1.155 0 0.093 1.016 3.199 81.429 73.469 LGA A 40 A 40 2.175 0 0.060 0.065 2.760 70.833 68.095 LGA L 41 L 41 1.404 0 0.081 0.923 2.098 86.190 79.583 LGA A 42 A 42 0.724 0 0.049 0.050 1.547 86.190 87.048 LGA V 43 V 43 1.711 0 0.085 1.198 4.441 75.000 64.558 LGA G 44 G 44 1.415 0 0.086 0.086 1.502 79.286 79.286 LGA W 45 W 45 1.516 0 0.109 0.266 2.228 72.976 70.612 LGA L 46 L 46 1.216 0 0.062 0.134 1.540 79.286 82.619 LGA A 47 A 47 1.432 0 0.117 0.111 1.479 81.429 81.429 LGA R 48 R 48 1.844 0 0.059 1.716 12.016 72.857 38.831 LGA E 49 E 49 1.570 0 0.159 0.976 5.367 77.143 61.217 LGA N 50 N 50 0.884 0 0.110 0.572 1.650 85.952 86.012 LGA K 51 K 51 0.983 0 0.180 0.671 2.373 83.810 77.831 LGA V 52 V 52 0.646 0 0.047 1.207 2.824 88.214 82.109 LGA V 53 V 53 1.159 0 0.082 1.246 5.100 77.381 64.354 LGA I 54 I 54 2.687 0 0.578 1.295 5.378 51.548 48.929 LGA E 55 E 55 3.091 0 0.088 0.781 9.704 55.476 30.370 LGA R 56 R 56 3.989 0 0.419 1.402 13.107 51.905 20.736 LGA K 57 K 57 2.572 0 0.611 0.933 5.716 55.357 53.757 LGA N 58 N 58 5.812 0 0.605 1.019 9.931 16.429 13.988 LGA G 59 G 59 6.228 0 0.145 0.145 6.520 18.333 18.333 LGA L 60 L 60 5.109 0 0.631 0.603 7.338 25.238 20.536 LGA I 61 I 61 3.550 0 0.056 1.291 9.579 51.905 32.560 LGA E 62 E 62 3.134 0 0.086 1.207 10.316 48.571 26.243 LGA I 63 I 63 3.351 0 0.239 0.250 9.568 51.905 32.024 LGA Y 64 Y 64 3.047 0 0.072 0.704 13.604 48.571 20.079 LGA N 65 N 65 4.345 0 0.522 0.906 10.493 52.262 28.988 LGA E 66 E 66 2.273 0 0.191 0.802 6.155 65.119 47.831 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 64 256 256 100.00 493 493 100.00 64 SUMMARY(RMSD_GDC): 3.276 3.206 4.506 64.295 56.410 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 64 64 4.0 55 2.05 71.094 73.028 2.553 LGA_LOCAL RMSD: 2.054 Number of atoms: 55 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.554 Number of assigned atoms: 64 Std_ASGN_ATOMS RMSD: 3.276 Standard rmsd on all 64 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.525574 * X + 0.075157 * Y + -0.847422 * Z + -13.869896 Y_new = -0.711432 * X + 0.507388 * Y + 0.486232 * Z + -0.700916 Z_new = 0.466516 * X + 0.858434 * Y + -0.213201 * Z + -0.426829 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.207061 -0.485347 1.814231 [DEG: -126.4553 -27.8084 103.9478 ] ZXZ: -2.091712 1.785646 0.497800 [DEG: -119.8463 102.3100 28.5219 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0560TS314_1-D1 REMARK 2: T0560-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0560TS314_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 64 64 4.0 55 2.05 73.028 3.28 REMARK ---------------------------------------------------------- MOLECULE T0560TS314_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0560 REMARK MODEL 1 REMARK PARENT 1dpu:A ATOM 17 N LYS 3 -2.561 8.042 15.688 1.00 0.50 N ATOM 18 CA LYS 3 -2.631 9.158 14.794 1.00 0.50 C ATOM 19 CB LYS 3 -1.253 9.641 14.307 1.00 0.50 C ATOM 20 CG LYS 3 -0.508 10.537 15.297 1.00 0.50 C ATOM 21 CD LYS 3 -1.189 11.893 15.475 1.00 0.50 C ATOM 22 CE LYS 3 -0.373 12.887 16.305 1.00 0.50 C ATOM 23 NZ LYS 3 -0.416 12.501 17.732 1.00 0.50 N ATOM 24 C LYS 3 -3.340 8.639 13.595 1.00 0.50 C ATOM 25 O LYS 3 -2.716 8.088 12.690 1.00 0.50 O ATOM 26 N LYS 4 -4.675 8.791 13.553 1.00 0.50 N ATOM 27 CA LYS 4 -5.379 8.272 12.419 1.00 0.50 C ATOM 28 CB LYS 4 -6.045 6.916 12.694 1.00 0.50 C ATOM 29 CG LYS 4 -6.723 6.277 11.484 1.00 0.50 C ATOM 30 CD LYS 4 -7.096 4.816 11.738 1.00 0.50 C ATOM 31 CE LYS 4 -8.304 4.654 12.660 1.00 0.50 C ATOM 32 NZ LYS 4 -8.424 3.246 13.092 1.00 0.50 N ATOM 33 C LYS 4 -6.465 9.232 12.089 1.00 0.50 C ATOM 34 O LYS 4 -6.884 10.031 12.924 1.00 0.50 O ATOM 35 N ILE 5 -6.945 9.178 10.835 1.00 0.50 N ATOM 36 CA ILE 5 -8.013 10.051 10.467 1.00 0.50 C ATOM 37 CB ILE 5 -7.831 10.742 9.145 1.00 0.50 C ATOM 38 CG2 ILE 5 -7.903 9.678 8.039 1.00 0.50 C ATOM 39 CG1 ILE 5 -8.838 11.899 8.995 1.00 0.50 C ATOM 40 CD1 ILE 5 -8.527 12.852 7.838 1.00 0.50 C ATOM 41 C ILE 5 -9.245 9.208 10.416 1.00 0.50 C ATOM 42 O ILE 5 -9.262 8.118 9.844 1.00 0.50 O ATOM 43 N VAL 6 -10.314 9.706 11.056 1.00 0.50 N ATOM 44 CA VAL 6 -11.531 8.965 11.171 1.00 0.50 C ATOM 45 CB VAL 6 -12.279 9.229 12.450 1.00 0.50 C ATOM 46 CG1 VAL 6 -11.413 8.783 13.642 1.00 0.50 C ATOM 47 CG2 VAL 6 -12.662 10.719 12.495 1.00 0.50 C ATOM 48 C VAL 6 -12.421 9.376 10.054 1.00 0.50 C ATOM 49 O VAL 6 -12.057 10.210 9.224 1.00 0.50 O ATOM 50 N GLY 7 -13.609 8.752 9.987 1.00 0.50 N ATOM 51 CA GLY 7 -14.524 9.054 8.933 1.00 0.50 C ATOM 52 C GLY 7 -14.221 8.083 7.851 1.00 0.50 C ATOM 53 O GLY 7 -13.405 7.179 8.029 1.00 0.50 O ATOM 54 N ALA 8 -14.888 8.225 6.693 1.00 0.50 N ATOM 55 CA ALA 8 -14.595 7.287 5.658 1.00 0.50 C ATOM 56 CB ALA 8 -15.612 7.300 4.506 1.00 0.50 C ATOM 57 C ALA 8 -13.272 7.684 5.107 1.00 0.50 C ATOM 58 O ALA 8 -13.141 8.696 4.420 1.00 0.50 O ATOM 59 N ASN 9 -12.250 6.879 5.438 1.00 0.50 N ATOM 60 CA ASN 9 -10.911 7.089 4.991 1.00 0.50 C ATOM 61 CB ASN 9 -10.260 8.390 5.489 1.00 0.50 C ATOM 62 CG ASN 9 -9.070 8.684 4.581 1.00 0.50 C ATOM 63 OD1 ASN 9 -8.541 7.800 3.907 1.00 0.50 O ATOM 64 ND2 ASN 9 -8.635 9.971 4.556 1.00 0.50 N ATOM 65 C ASN 9 -10.139 5.942 5.546 1.00 0.50 C ATOM 66 O ASN 9 -10.580 4.795 5.477 1.00 0.50 O ATOM 67 N ALA 10 -8.950 6.228 6.105 1.00 0.50 N ATOM 68 CA ALA 10 -8.157 5.175 6.658 1.00 0.50 C ATOM 69 CB ALA 10 -6.830 5.668 7.262 1.00 0.50 C ATOM 70 C ALA 10 -8.942 4.542 7.757 1.00 0.50 C ATOM 71 O ALA 10 -8.966 3.320 7.891 1.00 0.50 O ATOM 72 N GLY 11 -9.630 5.361 8.573 1.00 0.50 N ATOM 73 CA GLY 11 -10.363 4.788 9.662 1.00 0.50 C ATOM 74 C GLY 11 -11.409 3.871 9.112 1.00 0.50 C ATOM 75 O GLY 11 -11.598 2.764 9.617 1.00 0.50 O ATOM 76 N LYS 12 -12.119 4.308 8.055 1.00 0.50 N ATOM 77 CA LYS 12 -13.184 3.509 7.517 1.00 0.50 C ATOM 78 CB LYS 12 -13.992 4.227 6.418 1.00 0.50 C ATOM 79 CG LYS 12 -15.239 3.453 5.982 1.00 0.50 C ATOM 80 CD LYS 12 -16.287 3.318 7.090 1.00 0.50 C ATOM 81 CE LYS 12 -17.532 2.542 6.657 1.00 0.50 C ATOM 82 NZ LYS 12 -18.358 3.376 5.755 1.00 0.50 N ATOM 83 C LYS 12 -12.633 2.243 6.935 1.00 0.50 C ATOM 84 O LYS 12 -13.177 1.163 7.162 1.00 0.50 O ATOM 85 N VAL 13 -11.521 2.335 6.183 1.00 0.50 N ATOM 86 CA VAL 13 -10.984 1.159 5.556 1.00 0.50 C ATOM 87 CB VAL 13 -9.808 1.431 4.655 1.00 0.50 C ATOM 88 CG1 VAL 13 -8.679 2.091 5.458 1.00 0.50 C ATOM 89 CG2 VAL 13 -9.392 0.112 3.990 1.00 0.50 C ATOM 90 C VAL 13 -10.576 0.187 6.612 1.00 0.50 C ATOM 91 O VAL 13 -10.816 -1.011 6.487 1.00 0.50 O ATOM 92 N TRP 14 -9.977 0.699 7.700 1.00 0.50 N ATOM 93 CA TRP 14 -9.519 -0.103 8.794 1.00 0.50 C ATOM 94 CB TRP 14 -8.925 0.819 9.878 1.00 0.50 C ATOM 95 CG TRP 14 -8.653 0.223 11.234 1.00 0.50 C ATOM 96 CD2 TRP 14 -9.447 0.553 12.384 1.00 0.50 C ATOM 97 CD1 TRP 14 -7.668 -0.618 11.667 1.00 0.50 C ATOM 98 NE1 TRP 14 -7.797 -0.825 13.021 1.00 0.50 N ATOM 99 CE2 TRP 14 -8.890 -0.111 13.474 1.00 0.50 C ATOM 100 CE3 TRP 14 -10.551 1.349 12.516 1.00 0.50 C ATOM 101 CZ2 TRP 14 -9.427 0.018 14.721 1.00 0.50 C ATOM 102 CZ3 TRP 14 -11.098 1.471 13.774 1.00 0.50 C ATOM 103 CH2 TRP 14 -10.542 0.817 14.856 1.00 0.50 H ATOM 104 C TRP 14 -10.684 -0.850 9.361 1.00 0.50 C ATOM 105 O TRP 14 -10.625 -2.063 9.561 1.00 0.50 O ATOM 106 N HIS 15 -11.790 -0.131 9.606 1.00 0.50 N ATOM 107 CA HIS 15 -12.948 -0.715 10.205 1.00 0.50 C ATOM 108 ND1 HIS 15 -15.033 0.027 12.781 1.00 0.50 N ATOM 109 CG HIS 15 -15.103 -0.120 11.413 1.00 0.50 C ATOM 110 CB HIS 15 -14.029 0.344 10.477 1.00 0.50 C ATOM 111 NE2 HIS 15 -16.985 -0.944 12.346 1.00 0.50 N ATOM 112 CD2 HIS 15 -16.299 -0.718 11.165 1.00 0.50 C ATOM 113 CE1 HIS 15 -16.183 -0.480 13.290 1.00 0.50 C ATOM 114 C HIS 15 -13.511 -1.751 9.276 1.00 0.50 C ATOM 115 O HIS 15 -13.892 -2.840 9.701 1.00 0.50 O ATOM 116 N ALA 16 -13.571 -1.442 7.969 1.00 0.50 N ATOM 117 CA ALA 16 -14.173 -2.343 7.030 1.00 0.50 C ATOM 118 CB ALA 16 -14.226 -1.765 5.605 1.00 0.50 C ATOM 119 C ALA 16 -13.419 -3.636 6.951 1.00 0.50 C ATOM 120 O ALA 16 -14.020 -4.707 6.989 1.00 0.50 O ATOM 121 N LEU 17 -12.078 -3.571 6.866 1.00 0.50 N ATOM 122 CA LEU 17 -11.303 -4.758 6.647 1.00 0.50 C ATOM 123 CB LEU 17 -9.819 -4.462 6.325 1.00 0.50 C ATOM 124 CG LEU 17 -8.908 -5.665 5.959 1.00 0.50 C ATOM 125 CD1 LEU 17 -7.527 -5.171 5.509 1.00 0.50 C ATOM 126 CD2 LEU 17 -8.761 -6.701 7.084 1.00 0.50 C ATOM 127 C LEU 17 -11.402 -5.673 7.825 1.00 0.50 C ATOM 128 O LEU 17 -11.486 -6.886 7.657 1.00 0.50 O ATOM 129 N ASN 18 -11.415 -5.132 9.053 1.00 0.50 N ATOM 130 CA ASN 18 -11.358 -5.993 10.203 1.00 0.50 C ATOM 131 CB ASN 18 -11.169 -5.243 11.537 1.00 0.50 C ATOM 132 CG ASN 18 -12.323 -4.283 11.764 1.00 0.50 C ATOM 133 OD1 ASN 18 -12.177 -3.078 11.554 1.00 0.50 O ATOM 134 ND2 ASN 18 -13.492 -4.819 12.202 1.00 0.50 N ATOM 135 C ASN 18 -12.548 -6.903 10.325 1.00 0.50 C ATOM 136 O ASN 18 -12.402 -8.049 10.750 1.00 0.50 O ATOM 137 N GLU 19 -13.759 -6.443 9.956 1.00 0.50 N ATOM 138 CA GLU 19 -14.938 -7.233 10.202 1.00 0.50 C ATOM 139 CB GLU 19 -16.227 -6.501 9.786 1.00 0.50 C ATOM 140 CG GLU 19 -16.294 -6.187 8.289 1.00 0.50 C ATOM 141 CD GLU 19 -17.595 -5.452 8.002 1.00 0.50 C ATOM 142 OE1 GLU 19 -18.469 -5.405 8.909 1.00 0.50 O ATOM 143 OE2 GLU 19 -17.737 -4.927 6.865 1.00 0.50 O ATOM 144 C GLU 19 -14.919 -8.562 9.488 1.00 0.50 C ATOM 145 O GLU 19 -15.192 -9.592 10.104 1.00 0.50 O ATOM 146 N ALA 20 -14.590 -8.588 8.183 1.00 0.50 N ATOM 147 CA ALA 20 -14.649 -9.801 7.402 1.00 0.50 C ATOM 148 CB ALA 20 -14.847 -9.548 5.899 1.00 0.50 C ATOM 149 C ALA 20 -13.387 -10.589 7.561 1.00 0.50 C ATOM 150 O ALA 20 -12.450 -10.149 8.224 1.00 0.50 O ATOM 151 N ASP 21 -13.367 -11.815 6.979 1.00 0.50 N ATOM 152 CA ASP 21 -12.198 -12.653 7.006 1.00 0.50 C ATOM 153 CB ASP 21 -12.459 -14.098 6.545 1.00 0.50 C ATOM 154 CG ASP 21 -13.134 -14.843 7.691 1.00 0.50 C ATOM 155 OD1 ASP 21 -12.449 -15.081 8.723 1.00 0.50 O ATOM 156 OD2 ASP 21 -14.334 -15.195 7.548 1.00 0.50 O ATOM 157 C ASP 21 -11.235 -12.052 6.050 1.00 0.50 C ATOM 158 O ASP 21 -10.983 -12.556 4.955 1.00 0.50 O ATOM 159 N GLY 22 -10.689 -10.898 6.447 1.00 0.50 N ATOM 160 CA GLY 22 -9.767 -10.224 5.609 1.00 0.50 C ATOM 161 C GLY 22 -10.578 -9.611 4.525 1.00 0.50 C ATOM 162 O GLY 22 -11.650 -10.104 4.176 1.00 0.50 O ATOM 163 N ILE 23 -10.096 -8.491 3.975 1.00 0.50 N ATOM 164 CA ILE 23 -10.770 -7.990 2.827 1.00 0.50 C ATOM 165 CB ILE 23 -11.349 -6.610 2.960 1.00 0.50 C ATOM 166 CG2 ILE 23 -10.241 -5.617 3.335 1.00 0.50 C ATOM 167 CG1 ILE 23 -12.093 -6.254 1.663 1.00 0.50 C ATOM 168 CD1 ILE 23 -13.317 -7.130 1.395 1.00 0.50 C ATOM 169 C ILE 23 -9.729 -7.987 1.773 1.00 0.50 C ATOM 170 O ILE 23 -8.680 -7.362 1.920 1.00 0.50 O ATOM 171 N SER 24 -9.974 -8.721 0.681 1.00 0.50 N ATOM 172 CA SER 24 -8.958 -8.738 -0.314 1.00 0.50 C ATOM 173 CB SER 24 -9.267 -9.664 -1.500 1.00 0.50 C ATOM 174 OG SER 24 -8.176 -9.674 -2.403 1.00 0.50 O ATOM 175 C SER 24 -8.879 -7.343 -0.817 1.00 0.50 C ATOM 176 O SER 24 -9.866 -6.611 -0.786 1.00 0.50 O ATOM 177 N ILE 25 -7.684 -6.930 -1.276 1.00 0.50 N ATOM 178 CA ILE 25 -7.563 -5.576 -1.714 1.00 0.50 C ATOM 179 CB ILE 25 -6.152 -5.108 -2.004 1.00 0.50 C ATOM 180 CG2 ILE 25 -5.543 -5.798 -3.234 1.00 0.50 C ATOM 181 CG1 ILE 25 -6.165 -3.579 -2.116 1.00 0.50 C ATOM 182 CD1 ILE 25 -4.773 -2.958 -2.090 1.00 0.50 C ATOM 183 C ILE 25 -8.489 -5.328 -2.869 1.00 0.50 C ATOM 184 O ILE 25 -9.077 -4.245 -2.902 1.00 0.50 O ATOM 185 N PRO 26 -8.694 -6.187 -3.843 1.00 0.50 N ATOM 186 CA PRO 26 -9.646 -5.902 -4.879 1.00 0.50 C ATOM 187 CD PRO 26 -7.928 -7.393 -4.115 1.00 0.50 C ATOM 188 CB PRO 26 -9.478 -7.002 -5.929 1.00 0.50 C ATOM 189 CG PRO 26 -8.747 -8.132 -5.182 1.00 0.50 C ATOM 190 C PRO 26 -11.034 -5.820 -4.324 1.00 0.50 C ATOM 191 O PRO 26 -11.851 -5.089 -4.882 1.00 0.50 O ATOM 192 N GLU 27 -11.340 -6.593 -3.265 1.00 0.50 N ATOM 193 CA GLU 27 -12.652 -6.557 -2.689 1.00 0.50 C ATOM 194 CB GLU 27 -12.908 -7.731 -1.727 1.00 0.50 C ATOM 195 CG GLU 27 -13.110 -9.048 -2.490 1.00 0.50 C ATOM 196 CD GLU 27 -13.146 -10.204 -1.501 1.00 0.50 C ATOM 197 OE1 GLU 27 -12.843 -9.963 -0.302 1.00 0.50 O ATOM 198 OE2 GLU 27 -13.476 -11.340 -1.934 1.00 0.50 O ATOM 199 C GLU 27 -12.849 -5.247 -1.989 1.00 0.50 C ATOM 200 O GLU 27 -13.921 -4.649 -2.060 1.00 0.50 O ATOM 201 N LEU 28 -11.802 -4.755 -1.296 1.00 0.50 N ATOM 202 CA LEU 28 -11.902 -3.494 -0.614 1.00 0.50 C ATOM 203 CB LEU 28 -10.616 -3.136 0.160 1.00 0.50 C ATOM 204 CG LEU 28 -10.593 -1.733 0.813 1.00 0.50 C ATOM 205 CD1 LEU 28 -10.343 -0.603 -0.204 1.00 0.50 C ATOM 206 CD2 LEU 28 -11.856 -1.501 1.652 1.00 0.50 C ATOM 207 C LEU 28 -12.136 -2.444 -1.648 1.00 0.50 C ATOM 208 O LEU 28 -12.973 -1.560 -1.472 1.00 0.50 O ATOM 209 N ALA 29 -11.405 -2.554 -2.774 1.00 0.50 N ATOM 210 CA ALA 29 -11.478 -1.607 -3.847 1.00 0.50 C ATOM 211 CB ALA 29 -10.527 -1.950 -5.007 1.00 0.50 C ATOM 212 C ALA 29 -12.869 -1.616 -4.386 1.00 0.50 C ATOM 213 O ALA 29 -13.413 -0.574 -4.749 1.00 0.50 O ATOM 214 N ARG 30 -13.490 -2.805 -4.442 1.00 0.50 N ATOM 215 CA ARG 30 -14.807 -2.884 -4.988 1.00 0.50 C ATOM 216 CB ARG 30 -15.380 -4.316 -4.931 1.00 0.50 C ATOM 217 CG ARG 30 -14.575 -5.309 -5.777 1.00 0.50 C ATOM 218 CD ARG 30 -15.106 -6.746 -5.767 1.00 0.50 C ATOM 219 NE ARG 30 -16.322 -6.792 -6.629 1.00 0.50 N ATOM 220 CZ ARG 30 -17.549 -6.992 -6.065 1.00 0.50 C ATOM 221 NH1 ARG 30 -17.657 -7.175 -4.717 1.00 0.50 H ATOM 222 NH2 ARG 30 -18.668 -7.020 -6.849 1.00 0.50 H ATOM 223 C ARG 30 -15.693 -1.981 -4.184 1.00 0.50 C ATOM 224 O ARG 30 -16.471 -1.211 -4.745 1.00 0.50 O ATOM 225 N LYS 31 -15.587 -2.035 -2.842 1.00 0.50 N ATOM 226 CA LYS 31 -16.421 -1.202 -2.020 1.00 0.50 C ATOM 227 CB LYS 31 -16.308 -1.447 -0.502 1.00 0.50 C ATOM 228 CG LYS 31 -17.104 -2.623 0.065 1.00 0.50 C ATOM 229 CD LYS 31 -16.490 -4.004 -0.169 1.00 0.50 C ATOM 230 CE LYS 31 -17.160 -5.099 0.668 1.00 0.50 C ATOM 231 NZ LYS 31 -16.472 -6.393 0.458 1.00 0.50 N ATOM 232 C LYS 31 -16.078 0.244 -2.187 1.00 0.50 C ATOM 233 O LYS 31 -16.969 1.090 -2.260 1.00 0.50 O ATOM 234 N VAL 32 -14.777 0.578 -2.273 1.00 0.50 N ATOM 235 CA VAL 32 -14.436 1.969 -2.172 1.00 0.50 C ATOM 236 CB VAL 32 -13.235 2.207 -1.303 1.00 0.50 C ATOM 237 CG1 VAL 32 -12.949 3.716 -1.261 1.00 0.50 C ATOM 238 CG2 VAL 32 -13.497 1.583 0.077 1.00 0.50 C ATOM 239 C VAL 32 -14.140 2.599 -3.496 1.00 0.50 C ATOM 240 O VAL 32 -13.512 2.001 -4.368 1.00 0.50 O ATOM 241 N ASN 33 -14.630 3.850 -3.658 1.00 0.50 N ATOM 242 CA ASN 33 -14.386 4.688 -4.799 1.00 0.50 C ATOM 243 CB ASN 33 -15.179 6.009 -4.794 1.00 0.50 C ATOM 244 CG ASN 33 -16.613 5.738 -5.217 1.00 0.50 C ATOM 245 OD1 ASN 33 -16.896 4.752 -5.897 1.00 0.50 O ATOM 246 ND2 ASN 33 -17.542 6.651 -4.824 1.00 0.50 N ATOM 247 C ASN 33 -12.950 5.094 -4.771 1.00 0.50 C ATOM 248 O ASN 33 -12.324 5.239 -5.819 1.00 0.50 O ATOM 249 N LEU 34 -12.390 5.271 -3.556 1.00 0.50 N ATOM 250 CA LEU 34 -11.074 5.822 -3.425 1.00 0.50 C ATOM 251 CB LEU 34 -10.602 5.945 -1.966 1.00 0.50 C ATOM 252 CG LEU 34 -9.316 6.774 -1.789 1.00 0.50 C ATOM 253 CD1 LEU 34 -9.536 8.230 -2.239 1.00 0.50 C ATOM 254 CD2 LEU 34 -8.776 6.681 -0.350 1.00 0.50 C ATOM 255 C LEU 34 -10.115 5.005 -4.227 1.00 0.50 C ATOM 256 O LEU 34 -10.160 3.775 -4.251 1.00 0.50 O ATOM 257 N SER 35 -9.209 5.722 -4.917 1.00 0.50 N ATOM 258 CA SER 35 -8.318 5.139 -5.870 1.00 0.50 C ATOM 259 CB SER 35 -7.364 6.147 -6.537 1.00 0.50 C ATOM 260 OG SER 35 -6.514 5.471 -7.454 1.00 0.50 O ATOM 261 C SER 35 -7.478 4.105 -5.215 1.00 0.50 C ATOM 262 O SER 35 -7.332 4.070 -3.995 1.00 0.50 O ATOM 263 N VAL 36 -6.928 3.216 -6.064 1.00 0.50 N ATOM 264 CA VAL 36 -6.080 2.135 -5.672 1.00 0.50 C ATOM 265 CB VAL 36 -5.656 1.303 -6.845 1.00 0.50 C ATOM 266 CG1 VAL 36 -4.898 2.198 -7.842 1.00 0.50 C ATOM 267 CG2 VAL 36 -4.836 0.117 -6.320 1.00 0.50 C ATOM 268 C VAL 36 -4.851 2.709 -5.044 1.00 0.50 C ATOM 269 O VAL 36 -4.359 2.192 -4.042 1.00 0.50 O ATOM 270 N GLU 37 -4.327 3.812 -5.612 1.00 0.50 N ATOM 271 CA GLU 37 -3.142 4.406 -5.078 1.00 0.50 C ATOM 272 CB GLU 37 -2.661 5.622 -5.894 1.00 0.50 C ATOM 273 CG GLU 37 -1.355 6.245 -5.385 1.00 0.50 C ATOM 274 CD GLU 37 -0.971 7.341 -6.370 1.00 0.50 C ATOM 275 OE1 GLU 37 -1.597 7.388 -7.462 1.00 0.50 O ATOM 276 OE2 GLU 37 -0.054 8.143 -6.049 1.00 0.50 O ATOM 277 C GLU 37 -3.463 4.858 -3.691 1.00 0.50 C ATOM 278 O GLU 37 -2.668 4.669 -2.771 1.00 0.50 O ATOM 279 N SER 38 -4.658 5.446 -3.492 1.00 0.50 N ATOM 280 CA SER 38 -5.020 5.940 -2.194 1.00 0.50 C ATOM 281 CB SER 38 -6.396 6.631 -2.174 1.00 0.50 C ATOM 282 OG SER 38 -6.410 7.723 -3.079 1.00 0.50 O ATOM 283 C SER 38 -5.092 4.795 -1.234 1.00 0.50 C ATOM 284 O SER 38 -4.573 4.871 -0.123 1.00 0.50 O ATOM 285 N THR 39 -5.736 3.687 -1.641 1.00 0.50 N ATOM 286 CA THR 39 -5.865 2.580 -0.738 1.00 0.50 C ATOM 287 CB THR 39 -6.793 1.508 -1.235 1.00 0.50 C ATOM 288 OG1 THR 39 -7.009 0.536 -0.223 1.00 0.50 O ATOM 289 CG2 THR 39 -6.178 0.845 -2.474 1.00 0.50 C ATOM 290 C THR 39 -4.508 2.001 -0.488 1.00 0.50 C ATOM 291 O THR 39 -4.233 1.482 0.591 1.00 0.50 O ATOM 292 N ALA 40 -3.620 2.052 -1.498 1.00 0.50 N ATOM 293 CA ALA 40 -2.299 1.516 -1.337 1.00 0.50 C ATOM 294 CB ALA 40 -1.437 1.654 -2.608 1.00 0.50 C ATOM 295 C ALA 40 -1.616 2.285 -0.250 1.00 0.50 C ATOM 296 O ALA 40 -0.928 1.714 0.596 1.00 0.50 O ATOM 297 N LEU 41 -1.790 3.617 -0.237 1.00 0.50 N ATOM 298 CA LEU 41 -1.146 4.388 0.788 1.00 0.50 C ATOM 299 CB LEU 41 -1.388 5.905 0.677 1.00 0.50 C ATOM 300 CG LEU 41 -0.782 6.570 -0.574 1.00 0.50 C ATOM 301 CD1 LEU 41 -1.078 8.081 -0.584 1.00 0.50 C ATOM 302 CD2 LEU 41 0.718 6.254 -0.725 1.00 0.50 C ATOM 303 C LEU 41 -1.728 3.971 2.097 1.00 0.50 C ATOM 304 O LEU 41 -1.008 3.771 3.076 1.00 0.50 O ATOM 305 N ALA 42 -3.061 3.808 2.137 1.00 0.50 N ATOM 306 CA ALA 42 -3.731 3.479 3.361 1.00 0.50 C ATOM 307 CB ALA 42 -5.258 3.394 3.181 1.00 0.50 C ATOM 308 C ALA 42 -3.254 2.148 3.860 1.00 0.50 C ATOM 309 O ALA 42 -2.973 1.987 5.047 1.00 0.50 O ATOM 310 N VAL 43 -3.131 1.155 2.960 1.00 0.50 N ATOM 311 CA VAL 43 -2.745 -0.157 3.393 1.00 0.50 C ATOM 312 CB VAL 43 -2.805 -1.189 2.299 1.00 0.50 C ATOM 313 CG1 VAL 43 -4.262 -1.303 1.832 1.00 0.50 C ATOM 314 CG2 VAL 43 -1.834 -0.805 1.176 1.00 0.50 C ATOM 315 C VAL 43 -1.363 -0.112 3.952 1.00 0.50 C ATOM 316 O VAL 43 -1.091 -0.699 4.998 1.00 0.50 O ATOM 317 N GLY 44 -0.446 0.602 3.276 1.00 0.50 N ATOM 318 CA GLY 44 0.903 0.646 3.753 1.00 0.50 C ATOM 319 C GLY 44 0.914 1.299 5.099 1.00 0.50 C ATOM 320 O GLY 44 1.620 0.866 6.008 1.00 0.50 O ATOM 321 N TRP 45 0.122 2.372 5.255 1.00 0.50 N ATOM 322 CA TRP 45 0.120 3.140 6.465 1.00 0.50 C ATOM 323 CB TRP 45 -0.770 4.385 6.330 1.00 0.50 C ATOM 324 CG TRP 45 -0.602 5.381 7.445 1.00 0.50 C ATOM 325 CD2 TRP 45 0.384 6.422 7.422 1.00 0.50 C ATOM 326 CD1 TRP 45 -1.282 5.511 8.617 1.00 0.50 C ATOM 327 NE1 TRP 45 -0.786 6.576 9.329 1.00 0.50 N ATOM 328 CE2 TRP 45 0.237 7.148 8.604 1.00 0.50 C ATOM 329 CE3 TRP 45 1.328 6.745 6.493 1.00 0.50 C ATOM 330 CZ2 TRP 45 1.041 8.216 8.877 1.00 0.50 C ATOM 331 CZ3 TRP 45 2.135 7.826 6.771 1.00 0.50 C ATOM 332 CH2 TRP 45 1.992 8.548 7.938 1.00 0.50 H ATOM 333 C TRP 45 -0.380 2.307 7.607 1.00 0.50 C ATOM 334 O TRP 45 0.250 2.249 8.664 1.00 0.50 O ATOM 335 N LEU 46 -1.520 1.620 7.407 1.00 0.50 N ATOM 336 CA LEU 46 -2.124 0.823 8.436 1.00 0.50 C ATOM 337 CB LEU 46 -3.491 0.259 8.021 1.00 0.50 C ATOM 338 CG LEU 46 -4.527 1.378 7.806 1.00 0.50 C ATOM 339 CD1 LEU 46 -5.902 0.824 7.424 1.00 0.50 C ATOM 340 CD2 LEU 46 -4.578 2.328 9.014 1.00 0.50 C ATOM 341 C LEU 46 -1.187 -0.289 8.772 1.00 0.50 C ATOM 342 O LEU 46 -1.127 -0.737 9.917 1.00 0.50 O ATOM 343 N ALA 47 -0.441 -0.784 7.769 1.00 0.50 N ATOM 344 CA ALA 47 0.520 -1.812 8.027 1.00 0.50 C ATOM 345 CB ALA 47 1.271 -2.266 6.765 1.00 0.50 C ATOM 346 C ALA 47 1.538 -1.249 8.972 1.00 0.50 C ATOM 347 O ALA 47 1.966 -1.919 9.907 1.00 0.50 O ATOM 348 N ARG 48 1.929 0.023 8.770 1.00 0.50 N ATOM 349 CA ARG 48 2.942 0.635 9.584 1.00 0.50 C ATOM 350 CB ARG 48 3.167 2.112 9.222 1.00 0.50 C ATOM 351 CG ARG 48 3.770 2.296 7.833 1.00 0.50 C ATOM 352 CD ARG 48 5.266 2.589 7.860 1.00 0.50 C ATOM 353 NE ARG 48 5.744 2.419 6.466 1.00 0.50 N ATOM 354 CZ ARG 48 6.035 1.159 6.032 1.00 0.50 C ATOM 355 NH1 ARG 48 5.901 0.100 6.880 1.00 0.50 H ATOM 356 NH2 ARG 48 6.427 0.951 4.741 1.00 0.50 H ATOM 357 C ARG 48 2.470 0.612 10.997 1.00 0.50 C ATOM 358 O ARG 48 3.226 0.307 11.917 1.00 0.50 O ATOM 359 N GLU 49 1.185 0.934 11.193 1.00 0.50 N ATOM 360 CA GLU 49 0.601 0.951 12.497 1.00 0.50 C ATOM 361 CB GLU 49 -0.813 1.549 12.527 1.00 0.50 C ATOM 362 CG GLU 49 -0.835 3.077 12.429 1.00 0.50 C ATOM 363 CD GLU 49 -0.805 3.475 10.961 1.00 0.50 C ATOM 364 OE1 GLU 49 -1.806 3.182 10.250 1.00 0.50 O ATOM 365 OE2 GLU 49 0.216 4.077 10.533 1.00 0.50 O ATOM 366 C GLU 49 0.552 -0.450 13.016 1.00 0.50 C ATOM 367 O GLU 49 0.550 -0.676 14.225 1.00 0.50 O ATOM 368 N ASN 50 0.523 -1.435 12.100 1.00 0.50 N ATOM 369 CA ASN 50 0.401 -2.821 12.449 1.00 0.50 C ATOM 370 CB ASN 50 1.275 -3.254 13.640 1.00 0.50 C ATOM 371 CG ASN 50 2.736 -3.243 13.215 1.00 0.50 C ATOM 372 OD1 ASN 50 3.630 -3.133 14.053 1.00 0.50 O ATOM 373 ND2 ASN 50 2.994 -3.362 11.886 1.00 0.50 N ATOM 374 C ASN 50 -1.014 -3.069 12.839 1.00 0.50 C ATOM 375 O ASN 50 -1.337 -4.098 13.430 1.00 0.50 O ATOM 376 N LYS 51 -1.909 -2.115 12.523 1.00 0.50 N ATOM 377 CA LYS 51 -3.288 -2.407 12.751 1.00 0.50 C ATOM 378 CB LYS 51 -4.243 -1.232 12.463 1.00 0.50 C ATOM 379 CG LYS 51 -4.444 -0.248 13.623 1.00 0.50 C ATOM 380 CD LYS 51 -3.270 0.691 13.901 1.00 0.50 C ATOM 381 CE LYS 51 -3.589 1.752 14.964 1.00 0.50 C ATOM 382 NZ LYS 51 -2.561 2.821 14.960 1.00 0.50 N ATOM 383 C LYS 51 -3.633 -3.505 11.799 1.00 0.50 C ATOM 384 O LYS 51 -4.234 -4.509 12.176 1.00 0.50 O ATOM 385 N VAL 52 -3.204 -3.343 10.533 1.00 0.50 N ATOM 386 CA VAL 52 -3.495 -4.300 9.509 1.00 0.50 C ATOM 387 CB VAL 52 -3.725 -3.673 8.166 1.00 0.50 C ATOM 388 CG1 VAL 52 -2.430 -2.956 7.747 1.00 0.50 C ATOM 389 CG2 VAL 52 -4.153 -4.764 7.172 1.00 0.50 C ATOM 390 C VAL 52 -2.306 -5.180 9.351 1.00 0.50 C ATOM 391 O VAL 52 -1.166 -4.742 9.483 1.00 0.50 O ATOM 392 N VAL 53 -2.557 -6.471 9.086 1.00 0.50 N ATOM 393 CA VAL 53 -1.475 -7.355 8.817 1.00 0.50 C ATOM 394 CB VAL 53 -1.786 -8.796 9.129 1.00 0.50 C ATOM 395 CG1 VAL 53 -2.980 -9.270 8.283 1.00 0.50 C ATOM 396 CG2 VAL 53 -0.505 -9.621 8.923 1.00 0.50 C ATOM 397 C VAL 53 -1.250 -7.183 7.361 1.00 0.50 C ATOM 398 O VAL 53 -2.188 -7.275 6.571 1.00 0.50 O ATOM 399 N ILE 54 0.013 -6.937 6.971 1.00 0.50 N ATOM 400 CA ILE 54 0.289 -6.584 5.614 1.00 0.50 C ATOM 401 CB ILE 54 1.756 -6.373 5.369 1.00 0.50 C ATOM 402 CG2 ILE 54 2.192 -5.173 6.226 1.00 0.50 C ATOM 403 CG1 ILE 54 2.550 -7.665 5.644 1.00 0.50 C ATOM 404 CD1 ILE 54 4.011 -7.622 5.196 1.00 0.50 C ATOM 405 C ILE 54 -0.200 -7.673 4.728 1.00 0.50 C ATOM 406 O ILE 54 -0.861 -7.411 3.725 1.00 0.50 O ATOM 407 N GLU 55 0.086 -8.932 5.087 1.00 0.50 N ATOM 408 CA GLU 55 -0.373 -9.980 4.236 1.00 0.50 C ATOM 409 CB GLU 55 0.716 -10.555 3.317 1.00 0.50 C ATOM 410 CG GLU 55 1.208 -9.562 2.265 1.00 0.50 C ATOM 411 CD GLU 55 2.245 -10.255 1.394 1.00 0.50 C ATOM 412 OE1 GLU 55 2.756 -11.330 1.810 1.00 0.50 O ATOM 413 OE2 GLU 55 2.539 -9.715 0.296 1.00 0.50 O ATOM 414 C GLU 55 -0.833 -11.100 5.097 1.00 0.50 C ATOM 415 O GLU 55 -0.467 -11.207 6.266 1.00 0.50 O ATOM 416 N ARG 56 -1.674 -11.966 4.515 1.00 0.50 N ATOM 417 CA ARG 56 -2.178 -13.106 5.208 1.00 0.50 C ATOM 418 CB ARG 56 -3.672 -12.992 5.556 1.00 0.50 C ATOM 419 CG ARG 56 -3.942 -11.924 6.619 1.00 0.50 C ATOM 420 CD ARG 56 -3.876 -12.445 8.058 1.00 0.50 C ATOM 421 NE ARG 56 -2.603 -13.203 8.212 1.00 0.50 N ATOM 422 CZ ARG 56 -2.580 -14.556 8.029 1.00 0.50 C ATOM 423 NH1 ARG 56 -3.727 -15.224 7.709 1.00 0.50 H ATOM 424 NH2 ARG 56 -1.412 -15.248 8.171 1.00 0.50 H ATOM 425 C ARG 56 -1.985 -14.246 4.272 1.00 0.50 C ATOM 426 O ARG 56 -0.874 -14.496 3.806 1.00 0.50 O ATOM 427 N LYS 57 -3.072 -14.979 3.973 1.00 0.50 N ATOM 428 CA LYS 57 -2.926 -16.092 3.091 1.00 0.50 C ATOM 429 CB LYS 57 -4.226 -16.895 2.893 1.00 0.50 C ATOM 430 CG LYS 57 -4.485 -17.776 4.120 1.00 0.50 C ATOM 431 CD LYS 57 -5.876 -18.401 4.232 1.00 0.50 C ATOM 432 CE LYS 57 -6.037 -19.248 5.498 1.00 0.50 C ATOM 433 NZ LYS 57 -7.433 -19.719 5.630 1.00 0.50 N ATOM 434 C LYS 57 -2.392 -15.582 1.791 1.00 0.50 C ATOM 435 O LYS 57 -1.540 -16.225 1.182 1.00 0.50 O ATOM 436 N ASN 58 -2.866 -14.415 1.316 1.00 0.50 N ATOM 437 CA ASN 58 -2.256 -13.870 0.137 1.00 0.50 C ATOM 438 CB ASN 58 -3.118 -13.942 -1.145 1.00 0.50 C ATOM 439 CG ASN 58 -4.452 -13.248 -0.942 1.00 0.50 C ATOM 440 OD1 ASN 58 -4.616 -12.062 -1.221 1.00 0.50 O ATOM 441 ND2 ASN 58 -5.454 -14.029 -0.456 1.00 0.50 N ATOM 442 C ASN 58 -1.866 -12.458 0.446 1.00 0.50 C ATOM 443 O ASN 58 -2.422 -11.836 1.349 1.00 0.50 O ATOM 444 N GLY 59 -0.876 -11.918 -0.296 1.00 0.50 N ATOM 445 CA GLY 59 -0.339 -10.616 -0.010 1.00 0.50 C ATOM 446 C GLY 59 -1.407 -9.578 -0.120 1.00 0.50 C ATOM 447 O GLY 59 -1.467 -8.649 0.685 1.00 0.50 O ATOM 448 N LEU 60 -2.269 -9.710 -1.139 1.00 0.50 N ATOM 449 CA LEU 60 -3.319 -8.769 -1.392 1.00 0.50 C ATOM 450 CB LEU 60 -4.079 -9.054 -2.700 1.00 0.50 C ATOM 451 CG LEU 60 -3.197 -8.953 -3.959 1.00 0.50 C ATOM 452 CD1 LEU 60 -4.010 -9.203 -5.242 1.00 0.50 C ATOM 453 CD2 LEU 60 -2.433 -7.621 -3.990 1.00 0.50 C ATOM 454 C LEU 60 -4.301 -8.821 -0.265 1.00 0.50 C ATOM 455 O LEU 60 -4.938 -7.813 0.045 1.00 0.50 O ATOM 456 N ILE 61 -4.465 -9.994 0.380 1.00 0.50 N ATOM 457 CA ILE 61 -5.489 -10.110 1.379 1.00 0.50 C ATOM 458 CB ILE 61 -6.076 -11.498 1.476 1.00 0.50 C ATOM 459 CG2 ILE 61 -5.019 -12.473 2.020 1.00 0.50 C ATOM 460 CG1 ILE 61 -7.371 -11.476 2.292 1.00 0.50 C ATOM 461 CD1 ILE 61 -8.172 -12.767 2.149 1.00 0.50 C ATOM 462 C ILE 61 -4.951 -9.685 2.711 1.00 0.50 C ATOM 463 O ILE 61 -3.982 -10.238 3.225 1.00 0.50 O ATOM 464 N GLU 62 -5.599 -8.658 3.301 1.00 0.50 N ATOM 465 CA GLU 62 -5.166 -8.108 4.548 1.00 0.50 C ATOM 466 CB GLU 62 -5.018 -6.577 4.546 1.00 0.50 C ATOM 467 CG GLU 62 -4.058 -6.024 3.497 1.00 0.50 C ATOM 468 CD GLU 62 -4.871 -5.777 2.236 1.00 0.50 C ATOM 469 OE1 GLU 62 -6.000 -6.328 2.139 1.00 0.50 O ATOM 470 OE2 GLU 62 -4.372 -5.027 1.356 1.00 0.50 O ATOM 471 C GLU 62 -6.231 -8.388 5.559 1.00 0.50 C ATOM 472 O GLU 62 -7.398 -8.556 5.208 1.00 0.50 O ATOM 473 N ILE 63 -5.822 -8.479 6.842 1.00 0.50 N ATOM 474 CA ILE 63 -6.692 -8.675 7.969 1.00 0.50 C ATOM 475 CB ILE 63 -6.655 -10.079 8.507 1.00 0.50 C ATOM 476 CG2 ILE 63 -7.505 -10.140 9.787 1.00 0.50 C ATOM 477 CG1 ILE 63 -7.111 -11.078 7.431 1.00 0.50 C ATOM 478 CD1 ILE 63 -6.806 -12.534 7.786 1.00 0.50 C ATOM 479 C ILE 63 -6.151 -7.784 9.046 1.00 0.50 C ATOM 480 O ILE 63 -4.981 -7.403 8.989 1.00 0.50 O ATOM 481 N TYR 64 -6.957 -7.385 10.046 1.00 0.50 N ATOM 482 CA TYR 64 -6.392 -6.588 11.105 1.00 0.50 C ATOM 483 CB TYR 64 -7.248 -5.415 11.602 1.00 0.50 C ATOM 484 CG TYR 64 -7.281 -4.374 10.551 1.00 0.50 C ATOM 485 CD1 TYR 64 -6.318 -3.389 10.498 1.00 0.50 C ATOM 486 CD2 TYR 64 -8.283 -4.389 9.614 1.00 0.50 C ATOM 487 CE1 TYR 64 -6.361 -2.430 9.516 1.00 0.50 C ATOM 488 CE2 TYR 64 -8.327 -3.434 8.636 1.00 0.50 C ATOM 489 CZ TYR 64 -7.370 -2.459 8.585 1.00 0.50 C ATOM 490 OH TYR 64 -7.437 -1.488 7.569 1.00 0.50 H ATOM 491 C TYR 64 -6.256 -7.477 12.289 1.00 0.50 C ATOM 492 O TYR 64 -7.185 -8.205 12.631 1.00 0.50 O ATOM 493 N ASN 65 -5.079 -7.481 12.944 1.00 0.50 N ATOM 494 CA ASN 65 -4.992 -8.377 14.059 1.00 0.50 C ATOM 495 CB ASN 65 -3.607 -8.375 14.725 1.00 0.50 C ATOM 496 CG ASN 65 -3.508 -9.544 15.705 1.00 0.50 C ATOM 497 OD1 ASN 65 -4.196 -10.555 15.583 1.00 0.50 O ATOM 498 ND2 ASN 65 -2.619 -9.395 16.724 1.00 0.50 N ATOM 499 C ASN 65 -5.985 -7.947 15.094 1.00 0.50 C ATOM 500 O ASN 65 -6.961 -8.647 15.358 1.00 0.50 O ATOM 501 N GLU 66 -5.777 -6.762 15.702 1.00 0.50 N ATOM 502 CA GLU 66 -6.751 -6.304 16.655 1.00 0.50 C ATOM 503 CB GLU 66 -6.318 -5.069 17.465 1.00 0.50 C ATOM 504 CG GLU 66 -7.470 -4.479 18.289 1.00 0.50 C ATOM 505 CD GLU 66 -7.469 -5.052 19.702 1.00 0.50 C ATOM 506 OE1 GLU 66 -6.631 -5.948 19.988 1.00 0.50 O ATOM 507 OE2 GLU 66 -8.298 -4.575 20.524 1.00 0.50 O ATOM 508 C GLU 66 -7.959 -5.887 15.890 1.00 0.50 C ATOM 509 O GLU 66 -9.084 -6.268 16.208 1.00 0.50 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 493 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 62.92 74.6 126 100.0 126 ARMSMC SECONDARY STRUCTURE . . 60.23 79.2 96 100.0 96 ARMSMC SURFACE . . . . . . . . 66.45 71.1 90 100.0 90 ARMSMC BURIED . . . . . . . . 53.08 83.3 36 100.0 36 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.65 51.0 51 100.0 51 ARMSSC1 RELIABLE SIDE CHAINS . 77.71 56.8 44 100.0 44 ARMSSC1 SECONDARY STRUCTURE . . 84.62 50.0 38 100.0 38 ARMSSC1 SURFACE . . . . . . . . 79.92 54.1 37 100.0 37 ARMSSC1 BURIED . . . . . . . . 92.79 42.9 14 100.0 14 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.06 35.0 40 100.0 40 ARMSSC2 RELIABLE SIDE CHAINS . 85.10 37.0 27 100.0 27 ARMSSC2 SECONDARY STRUCTURE . . 79.57 44.8 29 100.0 29 ARMSSC2 SURFACE . . . . . . . . 87.46 31.2 32 100.0 32 ARMSSC2 BURIED . . . . . . . . 80.24 50.0 8 100.0 8 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 66.73 37.5 16 100.0 16 ARMSSC3 RELIABLE SIDE CHAINS . 66.73 37.5 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 72.33 27.3 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 66.73 37.5 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 118.23 11.1 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 118.23 11.1 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 100.92 16.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 118.23 11.1 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.28 (Number of atoms: 64) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.28 64 100.0 64 CRMSCA CRN = ALL/NP . . . . . 0.0512 CRMSCA SECONDARY STRUCTURE . . 3.25 48 100.0 48 CRMSCA SURFACE . . . . . . . . 3.40 46 100.0 46 CRMSCA BURIED . . . . . . . . 2.95 18 100.0 18 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.33 315 100.0 315 CRMSMC SECONDARY STRUCTURE . . 3.29 237 100.0 237 CRMSMC SURFACE . . . . . . . . 3.43 225 100.0 225 CRMSMC BURIED . . . . . . . . 3.07 90 100.0 90 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.62 237 31.5 752 CRMSSC RELIABLE SIDE CHAINS . 5.75 195 27.5 710 CRMSSC SECONDARY STRUCTURE . . 5.66 181 31.2 580 CRMSSC SURFACE . . . . . . . . 5.89 177 32.6 543 CRMSSC BURIED . . . . . . . . 4.74 60 28.7 209 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.53 493 48.9 1008 CRMSALL SECONDARY STRUCTURE . . 4.54 373 48.3 772 CRMSALL SURFACE . . . . . . . . 4.76 361 49.7 727 CRMSALL BURIED . . . . . . . . 3.83 132 47.0 281 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.273 0.617 0.314 64 100.0 64 ERRCA SECONDARY STRUCTURE . . 2.231 0.606 0.303 48 100.0 48 ERRCA SURFACE . . . . . . . . 2.422 0.641 0.328 46 100.0 46 ERRCA BURIED . . . . . . . . 1.894 0.554 0.277 18 100.0 18 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.312 0.623 0.316 315 100.0 315 ERRMC SECONDARY STRUCTURE . . 2.275 0.617 0.313 237 100.0 237 ERRMC SURFACE . . . . . . . . 2.435 0.640 0.323 225 100.0 225 ERRMC BURIED . . . . . . . . 2.005 0.581 0.298 90 100.0 90 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.155 0.729 0.364 237 31.5 752 ERRSC RELIABLE SIDE CHAINS . 4.239 0.727 0.364 195 27.5 710 ERRSC SECONDARY STRUCTURE . . 4.153 0.725 0.363 181 31.2 580 ERRSC SURFACE . . . . . . . . 4.422 0.743 0.371 177 32.6 543 ERRSC BURIED . . . . . . . . 3.368 0.686 0.343 60 28.7 209 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.160 0.673 0.339 493 48.9 1008 ERRALL SECONDARY STRUCTURE . . 3.138 0.669 0.337 373 48.3 772 ERRALL SURFACE . . . . . . . . 3.375 0.689 0.347 361 49.7 727 ERRALL BURIED . . . . . . . . 2.570 0.627 0.318 132 47.0 281 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 28 42 56 64 64 64 DISTCA CA (P) 7.81 43.75 65.62 87.50 100.00 64 DISTCA CA (RMS) 0.67 1.48 1.89 2.43 3.28 DISTCA ALL (N) 20 155 267 375 472 493 1008 DISTALL ALL (P) 1.98 15.38 26.49 37.20 46.83 1008 DISTALL ALL (RMS) 0.69 1.49 2.00 2.61 3.86 DISTALL END of the results output