####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 64 ( 493), selected 64 , name T0560TS250_1-D1 # Molecule2: number of CA atoms 64 ( 1008), selected 64 , name T0560-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0560TS250_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 47 3 - 49 4.91 17.11 LCS_AVERAGE: 59.33 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 12 - 42 1.99 18.02 LONGEST_CONTINUOUS_SEGMENT: 31 13 - 43 1.89 18.01 LCS_AVERAGE: 29.39 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 19 - 34 1.00 18.40 LONGEST_CONTINUOUS_SEGMENT: 16 28 - 43 0.94 18.48 LCS_AVERAGE: 14.23 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 64 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 3 K 3 4 5 47 3 3 4 5 7 8 19 28 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT K 4 K 4 4 5 47 3 3 4 16 21 24 34 35 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT I 5 I 5 4 5 47 3 3 16 23 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT V 6 V 6 4 5 47 3 3 4 6 19 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT G 7 G 7 3 5 47 3 10 17 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT A 8 A 8 3 5 47 3 3 4 6 18 30 34 36 39 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT N 9 N 9 5 7 47 3 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT A 10 A 10 5 10 47 5 5 11 19 27 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT G 11 G 11 5 10 47 5 5 6 8 9 13 22 33 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT K 12 K 12 5 31 47 5 5 7 9 12 18 23 34 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT V 13 V 13 5 31 47 5 5 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT W 14 W 14 5 31 47 5 5 6 12 25 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT H 15 H 15 11 31 47 5 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT A 16 A 16 11 31 47 5 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT L 17 L 17 11 31 47 5 9 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT N 18 N 18 11 31 47 5 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT E 19 E 19 16 31 47 5 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT A 20 A 20 16 31 47 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT D 21 D 21 16 31 47 3 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT G 22 G 22 16 31 47 2 3 6 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT I 23 I 23 16 31 47 5 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT S 24 S 24 16 31 47 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT I 25 I 25 16 31 47 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT P 26 P 26 16 31 47 5 10 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT E 27 E 27 16 31 47 5 13 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT L 28 L 28 16 31 47 5 11 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT A 29 A 29 16 31 47 8 13 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT R 30 R 30 16 31 47 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT K 31 K 31 16 31 47 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT V 32 V 32 16 31 47 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT N 33 N 33 16 31 47 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT L 34 L 34 16 31 47 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT S 35 S 35 16 31 47 8 13 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT V 36 V 36 16 31 47 8 11 17 23 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT E 37 E 37 16 31 47 8 11 17 22 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT S 38 S 38 16 31 47 8 11 19 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT T 39 T 39 16 31 47 8 11 17 22 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT A 40 A 40 16 31 47 8 11 17 22 27 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT L 41 L 41 16 31 47 8 11 17 23 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT A 42 A 42 16 31 47 8 11 17 22 31 33 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT V 43 V 43 16 31 47 8 11 17 21 27 33 36 36 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT G 44 G 44 3 30 47 3 3 4 5 6 7 25 34 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT W 45 W 45 3 5 47 3 4 4 5 6 11 13 32 40 42 43 43 43 44 44 44 44 44 45 45 LCS_GDT L 46 L 46 4 5 47 2 4 4 5 7 9 10 14 22 28 37 43 43 44 44 44 44 44 45 45 LCS_GDT A 47 A 47 4 7 47 3 4 4 4 7 9 10 12 14 20 22 28 34 38 40 42 44 44 45 45 LCS_GDT R 48 R 48 5 7 47 3 5 5 6 7 9 10 12 14 18 18 19 20 24 30 34 40 42 43 44 LCS_GDT E 49 E 49 5 7 47 4 5 5 6 7 9 10 12 13 14 15 18 21 25 32 36 40 42 43 44 LCS_GDT N 50 N 50 5 7 17 4 5 5 6 7 9 10 12 13 14 15 16 18 22 28 32 36 36 40 43 LCS_GDT K 51 K 51 5 7 17 4 5 5 6 7 8 10 11 12 12 15 17 20 24 28 34 38 42 43 44 LCS_GDT V 52 V 52 5 7 17 4 5 5 6 7 8 10 10 11 12 13 14 17 17 21 22 26 28 30 36 LCS_GDT V 53 V 53 5 7 17 3 3 5 6 7 8 10 11 11 14 15 16 17 21 22 25 28 30 30 33 LCS_GDT I 54 I 54 3 6 17 3 3 4 4 5 6 8 10 10 14 15 16 17 21 22 25 28 30 30 33 LCS_GDT E 55 E 55 3 6 15 1 4 4 4 5 6 8 10 10 14 15 16 17 21 22 25 28 30 30 33 LCS_GDT R 56 R 56 4 6 11 2 3 4 4 5 6 8 10 10 11 14 16 17 21 22 25 28 30 30 33 LCS_GDT K 57 K 57 4 6 11 2 3 4 4 5 6 8 10 10 11 13 16 17 20 22 24 26 28 30 32 LCS_GDT N 58 N 58 4 6 11 2 3 4 4 5 6 8 10 10 11 13 16 17 21 22 24 27 28 30 33 LCS_GDT G 59 G 59 4 6 11 0 3 4 4 5 6 8 8 8 8 13 16 17 21 22 25 28 30 30 33 LCS_GDT L 60 L 60 3 5 11 2 3 3 3 5 6 8 8 10 14 15 16 17 21 22 25 28 30 30 33 LCS_GDT I 61 I 61 3 5 11 2 3 3 4 5 5 7 7 9 12 14 14 15 19 21 24 28 30 30 33 LCS_GDT E 62 E 62 3 5 11 2 3 3 4 5 6 7 8 9 14 15 16 17 20 22 25 28 30 30 33 LCS_GDT I 63 I 63 3 4 11 0 3 4 4 5 6 7 8 9 14 15 16 17 21 22 25 28 30 30 33 LCS_GDT Y 64 Y 64 3 4 11 0 3 4 4 5 6 7 8 9 14 15 16 17 21 22 25 28 30 30 33 LCS_GDT N 65 N 65 3 4 11 2 3 4 4 5 6 7 7 9 12 14 14 17 19 22 25 28 30 30 33 LCS_GDT E 66 E 66 3 3 11 2 3 3 3 3 4 5 5 7 7 11 15 18 19 22 25 28 35 37 40 LCS_AVERAGE LCS_A: 34.32 ( 14.23 29.39 59.33 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 14 20 24 31 34 36 36 40 42 43 43 43 44 44 44 44 44 45 45 GDT PERCENT_AT 12.50 21.88 31.25 37.50 48.44 53.12 56.25 56.25 62.50 65.62 67.19 67.19 67.19 68.75 68.75 68.75 68.75 68.75 70.31 70.31 GDT RMS_LOCAL 0.29 0.72 0.94 1.16 1.62 1.87 2.00 2.00 2.54 2.72 2.89 2.89 2.89 3.14 3.14 3.14 3.14 3.14 3.63 3.63 GDT RMS_ALL_AT 19.21 18.52 18.60 18.35 17.98 17.69 17.75 17.75 17.75 17.81 17.74 17.74 17.74 17.66 17.66 17.66 17.66 17.66 17.49 17.49 # Checking swapping # possible swapping detected: D 21 D 21 # possible swapping detected: E 27 E 27 # possible swapping detected: E 49 E 49 # possible swapping detected: Y 64 Y 64 # possible swapping detected: E 66 E 66 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA K 3 K 3 8.085 0 0.669 0.887 14.740 7.976 3.545 LGA K 4 K 4 6.285 0 0.721 1.234 11.763 19.762 11.693 LGA I 5 I 5 1.772 0 0.554 0.845 5.360 63.214 50.476 LGA V 6 V 6 3.325 0 0.506 0.501 4.791 47.143 46.735 LGA G 7 G 7 1.124 0 0.558 0.558 2.119 77.262 77.262 LGA A 8 A 8 4.829 0 0.330 0.374 6.771 39.048 33.905 LGA N 9 N 9 1.685 0 0.444 0.687 5.911 81.667 56.131 LGA A 10 A 10 3.178 0 0.288 0.291 4.797 48.452 45.048 LGA G 11 G 11 6.047 0 0.707 0.707 6.047 24.048 24.048 LGA K 12 K 12 5.049 0 0.307 1.128 12.464 37.738 20.000 LGA V 13 V 13 1.981 0 0.578 1.492 5.145 63.452 53.333 LGA W 14 W 14 3.419 0 0.748 1.100 8.504 67.262 37.007 LGA H 15 H 15 1.416 0 0.224 0.970 4.181 81.429 65.286 LGA A 16 A 16 1.873 0 0.180 0.189 2.215 72.857 71.238 LGA L 17 L 17 2.380 0 0.190 0.793 3.564 64.762 59.286 LGA N 18 N 18 1.959 0 0.138 1.471 2.915 70.833 72.262 LGA E 19 E 19 1.564 0 0.428 0.715 7.421 75.000 46.085 LGA A 20 A 20 1.303 0 0.120 0.189 1.350 83.690 83.238 LGA D 21 D 21 2.477 0 0.241 0.974 3.514 70.833 65.357 LGA G 22 G 22 2.158 0 0.541 0.541 2.939 66.905 66.905 LGA I 23 I 23 0.717 0 0.150 0.657 1.999 88.214 89.524 LGA S 24 S 24 1.209 0 0.155 0.599 3.387 83.690 77.698 LGA I 25 I 25 1.245 0 0.114 1.241 4.497 83.690 71.786 LGA P 26 P 26 2.231 0 0.165 0.367 2.231 72.976 72.993 LGA E 27 E 27 1.613 0 0.083 1.042 3.724 77.143 66.296 LGA L 28 L 28 0.981 0 0.105 0.322 0.981 90.476 92.857 LGA A 29 A 29 0.766 0 0.148 0.143 0.840 92.857 92.381 LGA R 30 R 30 0.614 0 0.110 0.318 1.279 90.476 93.983 LGA K 31 K 31 0.562 0 0.073 1.360 6.754 92.857 74.074 LGA V 32 V 32 0.409 0 0.126 0.228 0.866 97.619 94.558 LGA N 33 N 33 1.162 0 0.210 0.594 1.816 85.952 84.881 LGA L 34 L 34 0.952 0 0.235 0.969 3.641 88.214 81.250 LGA S 35 S 35 0.969 0 0.125 0.712 2.585 88.214 81.905 LGA V 36 V 36 1.986 0 0.093 1.374 3.124 70.952 66.259 LGA E 37 E 37 2.220 0 0.094 0.392 4.902 66.786 50.635 LGA S 38 S 38 1.022 0 0.109 0.812 2.039 75.000 74.365 LGA T 39 T 39 2.396 0 0.118 1.340 4.011 65.119 61.088 LGA A 40 A 40 3.183 0 0.086 0.100 3.505 53.571 51.524 LGA L 41 L 41 2.298 0 0.096 0.940 4.066 60.952 57.619 LGA A 42 A 42 2.903 0 0.304 0.300 3.987 62.857 58.952 LGA V 43 V 43 3.752 0 0.653 0.740 5.239 53.810 44.286 LGA G 44 G 44 5.181 0 0.774 0.774 6.089 33.571 33.571 LGA W 45 W 45 5.536 0 0.128 1.506 8.197 16.905 28.163 LGA L 46 L 46 9.386 0 0.525 1.413 13.435 2.143 2.440 LGA A 47 A 47 13.642 0 0.406 0.439 17.409 0.000 0.000 LGA R 48 R 48 17.979 0 0.590 1.472 20.943 0.000 0.000 LGA E 49 E 49 19.192 0 0.356 0.594 20.782 0.000 0.000 LGA N 50 N 50 23.024 0 0.167 0.367 27.019 0.000 0.000 LGA K 51 K 51 20.430 0 0.190 0.917 23.202 0.000 0.000 LGA V 52 V 52 23.173 0 0.170 0.681 24.293 0.000 0.000 LGA V 53 V 53 27.904 0 0.360 1.506 30.212 0.000 0.000 LGA I 54 I 54 30.548 0 0.583 1.608 34.254 0.000 0.000 LGA E 55 E 55 34.368 0 0.556 1.263 42.165 0.000 0.000 LGA R 56 R 56 34.240 0 0.643 1.087 40.246 0.000 0.000 LGA K 57 K 57 37.548 0 0.141 0.954 39.379 0.000 0.000 LGA N 58 N 58 43.310 0 0.616 1.122 45.967 0.000 0.000 LGA G 59 G 59 43.334 0 0.611 0.611 43.467 0.000 0.000 LGA L 60 L 60 42.698 0 0.648 1.352 46.696 0.000 0.000 LGA I 61 I 61 39.133 0 0.482 0.766 41.398 0.000 0.000 LGA E 62 E 62 36.793 0 0.482 1.180 39.776 0.000 0.000 LGA I 63 I 63 30.689 0 0.454 1.550 32.983 0.000 0.000 LGA Y 64 Y 64 31.160 0 0.393 1.382 41.455 0.000 0.000 LGA N 65 N 65 27.485 0 0.440 1.478 28.978 0.000 0.000 LGA E 66 E 66 26.835 0 0.377 1.084 27.068 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 64 256 256 100.00 493 493 100.00 64 SUMMARY(RMSD_GDC): 12.203 12.056 13.038 44.647 40.499 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 64 64 4.0 36 2.00 46.094 45.959 1.713 LGA_LOCAL RMSD: 2.002 Number of atoms: 36 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.752 Number of assigned atoms: 64 Std_ASGN_ATOMS RMSD: 12.203 Standard rmsd on all 64 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.125111 * X + 0.158552 * Y + -0.979392 * Z + -0.781033 Y_new = 0.365766 * X + 0.924987 * Y + 0.103020 * Z + 76.526917 Z_new = 0.922259 * X + -0.345340 * Y + -0.173719 * Z + 2.917939 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.900374 -1.173885 -2.036872 [DEG: 108.8834 -67.2586 -116.7042 ] ZXZ: -1.675599 1.745402 1.929084 [DEG: -96.0047 100.0041 110.5284 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0560TS250_1-D1 REMARK 2: T0560-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0560TS250_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 64 64 4.0 36 2.00 45.959 12.20 REMARK ---------------------------------------------------------- MOLECULE T0560TS250_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0560 REMARK MODEL 1 REFINED REMARK PARENT N/A ATOM 30 CA LYS 3 -2.077 12.389 -1.584 1.00 1.84 C ATOM 31 N LYS 3 -1.719 11.067 -1.875 1.00 0.46 N ATOM 34 C LYS 3 -1.217 12.647 -0.263 1.00 0.46 C ATOM 35 O LYS 3 -0.486 11.832 0.401 1.00 0.46 O ATOM 36 CB LYS 3 -3.429 12.961 -1.904 1.00 0.46 C ATOM 39 CG LYS 3 -4.391 12.725 -0.745 1.00 0.46 C ATOM 42 CD LYS 3 -5.627 13.495 -1.171 1.00 0.46 C ATOM 45 CE LYS 3 -6.369 12.827 -2.367 1.00 0.46 C ATOM 48 NZ LYS 3 -6.099 11.340 -2.493 1.00 0.46 N ATOM 52 CA LYS 4 -0.847 14.221 1.277 1.00 0.59 C ATOM 53 N LYS 4 -1.280 13.835 0.030 1.00 0.46 N ATOM 56 C LYS 4 -2.250 14.579 1.721 1.00 0.46 C ATOM 57 O LYS 4 -3.081 15.090 0.937 1.00 0.46 O ATOM 58 CB LYS 4 0.288 15.309 1.189 1.00 0.46 C ATOM 61 CG LYS 4 -0.081 16.830 1.193 1.00 0.46 C ATOM 64 CD LYS 4 -0.290 17.496 -0.200 1.00 0.46 C ATOM 67 CE LYS 4 -0.189 19.048 -0.036 1.00 0.46 C ATOM 70 NZ LYS 4 -0.497 19.769 -1.348 1.00 0.46 N ATOM 74 CA ILE 5 -3.926 14.057 3.341 1.00 0.93 C ATOM 75 N ILE 5 -2.551 14.103 2.845 1.00 0.46 N ATOM 78 C ILE 5 -4.204 12.665 2.995 1.00 0.46 C ATOM 79 O ILE 5 -3.280 11.831 2.784 1.00 0.46 O ATOM 80 CB ILE 5 -3.999 15.095 4.565 1.00 0.46 C ATOM 82 CG1 ILE 5 -2.607 15.548 5.182 1.00 0.46 C ATOM 85 CG2 ILE 5 -4.986 14.927 5.752 1.00 0.46 C ATOM 89 CD1 ILE 5 -2.043 16.795 4.442 1.00 0.46 C ATOM 93 CA VAL 6 -5.668 11.903 4.134 1.00 0.86 C ATOM 94 N VAL 6 -5.417 12.375 2.983 1.00 0.46 N ATOM 97 C VAL 6 -4.941 11.979 5.646 1.00 0.46 C ATOM 98 O VAL 6 -3.793 12.392 6.007 1.00 0.46 O ATOM 99 CB VAL 6 -5.296 10.349 4.116 1.00 0.46 C ATOM 101 CG1 VAL 6 -6.286 9.866 3.091 1.00 0.46 C ATOM 102 CG2 VAL 6 -3.715 9.919 4.190 1.00 0.46 C ATOM 109 CA GLY 7 -4.832 10.632 7.524 1.00 1.24 C ATOM 110 N GLY 7 -5.590 11.290 6.486 1.00 0.46 N ATOM 114 C GLY 7 -4.847 9.251 7.488 1.00 0.46 C ATOM 115 O GLY 7 -5.444 8.865 8.467 1.00 0.46 O ATOM 116 CA ALA 8 -4.676 7.269 6.261 1.00 0.37 C ATOM 117 N ALA 8 -4.222 8.541 6.594 1.00 0.46 N ATOM 120 C ALA 8 -5.984 6.897 5.640 1.00 0.46 C ATOM 121 O ALA 8 -6.042 5.681 5.554 1.00 0.46 O ATOM 122 CB ALA 8 -4.573 6.451 7.631 1.00 0.46 C ATOM 126 CA ASN 9 -8.300 7.095 5.847 1.00 0.97 C ATOM 127 N ASN 9 -7.003 7.640 5.328 1.00 0.46 N ATOM 130 C ASN 9 -9.104 6.394 4.751 1.00 0.46 C ATOM 131 O ASN 9 -8.904 5.426 3.926 1.00 0.46 O ATOM 132 CB ASN 9 -8.840 8.405 6.645 1.00 0.46 C ATOM 135 CG ASN 9 -9.820 9.403 5.974 1.00 0.46 C ATOM 136 OD1 ASN 9 -10.829 9.056 5.414 1.00 0.46 O ATOM 137 ND2 ASN 9 -9.607 10.734 6.138 1.00 0.46 N ATOM 140 CA ALA 10 -10.190 5.406 6.114 1.00 1.45 C ATOM 141 N ALA 10 -10.067 6.497 5.388 1.00 0.46 N ATOM 144 C ALA 10 -11.457 4.769 5.588 1.00 0.46 C ATOM 145 O ALA 10 -11.854 3.974 6.398 1.00 0.46 O ATOM 146 CB ALA 10 -10.466 5.820 7.622 1.00 0.46 C ATOM 150 CA GLY 11 -12.764 3.773 3.861 1.00 0.98 C ATOM 151 N GLY 11 -12.047 4.896 4.404 1.00 0.46 N ATOM 155 C GLY 11 -11.469 2.938 3.608 1.00 0.46 C ATOM 156 O GLY 11 -10.325 3.455 3.444 1.00 0.46 O ATOM 157 CA LYS 12 -10.665 0.770 3.108 1.00 0.60 C ATOM 158 N LYS 12 -11.692 1.712 3.499 1.00 0.46 N ATOM 161 C LYS 12 -10.269 0.269 4.470 1.00 0.46 C ATOM 162 O LYS 12 -10.849 -0.738 4.844 1.00 0.46 O ATOM 163 CB LYS 12 -9.158 1.158 2.528 1.00 0.46 C ATOM 166 CG LYS 12 -8.544 0.459 1.240 1.00 0.46 C ATOM 169 CD LYS 12 -7.048 0.024 1.562 1.00 0.46 C ATOM 172 CE LYS 12 -6.252 -1.002 0.660 1.00 0.46 C ATOM 175 NZ LYS 12 -5.887 -2.380 1.243 1.00 0.46 N ATOM 179 CA VAL 13 -9.481 0.661 6.599 1.00 1.08 C ATOM 180 N VAL 13 -9.443 0.933 5.246 1.00 0.46 N ATOM 183 C VAL 13 -10.696 1.444 7.103 1.00 0.46 C ATOM 184 O VAL 13 -10.391 2.456 7.670 1.00 0.46 O ATOM 185 CB VAL 13 -8.061 0.861 7.286 1.00 0.46 C ATOM 187 CG1 VAL 13 -7.658 2.319 7.674 1.00 0.46 C ATOM 188 CG2 VAL 13 -7.911 -0.040 8.558 1.00 0.46 C ATOM 195 CA TRP 14 -12.923 1.232 7.930 1.00 0.72 C ATOM 196 N TRP 14 -11.966 1.072 6.986 1.00 0.46 N ATOM 199 C TRP 14 -12.179 -0.125 8.596 1.00 0.46 C ATOM 200 O TRP 14 -11.526 -1.030 7.951 1.00 0.46 O ATOM 201 CB TRP 14 -13.446 2.637 8.338 1.00 0.46 C ATOM 204 CG TRP 14 -12.736 3.557 9.348 1.00 0.46 C ATOM 205 CD1 TRP 14 -13.265 4.820 9.627 1.00 0.46 C ATOM 206 CD2 TRP 14 -11.602 3.446 10.175 1.00 0.46 C ATOM 207 NE1 TRP 14 -12.512 5.439 10.560 1.00 0.46 N ATOM 208 CE2 TRP 14 -11.503 4.625 10.899 1.00 0.46 C ATOM 209 CE3 TRP 14 -10.655 2.431 10.380 1.00 0.46 C ATOM 210 CZ2 TRP 14 -10.485 4.853 11.828 1.00 0.46 C ATOM 211 CZ3 TRP 14 -9.618 2.637 11.306 1.00 0.46 C ATOM 212 CH2 TRP 14 -9.533 3.841 12.027 1.00 0.46 H ATOM 219 N HIS 15 -12.270 -0.317 9.812 1.00 0.44 N ATOM 220 CA HIS 15 -13.453 -0.965 10.147 1.00 0.10 C ATOM 221 C HIS 15 -14.133 -2.151 9.383 1.00 0.10 C ATOM 222 O HIS 15 -15.044 -2.596 10.055 1.00 0.44 O ATOM 223 CB HIS 15 -14.529 0.162 9.997 1.00 0.27 C ATOM 224 CG HIS 15 -14.272 1.429 10.847 1.00 0.25 C ATOM 229 ND1 HIS 15 -13.248 1.640 11.848 1.00 0.46 N ATOM 230 CD2 HIS 15 -15.173 2.461 11.004 1.00 0.46 C ATOM 231 CE1 HIS 15 -13.558 2.717 12.541 1.00 0.46 C ATOM 232 NE2 HIS 15 -14.766 3.384 12.061 1.00 0.46 N ATOM 236 N ALA 16 -13.994 -2.597 8.158 1.00 0.31 N ATOM 237 CA ALA 16 -14.699 -3.693 7.641 1.00 0.49 C ATOM 238 C ALA 16 -14.080 -4.805 8.362 1.00 0.08 C ATOM 239 O ALA 16 -14.840 -5.695 8.258 1.00 0.19 O ATOM 240 CB ALA 16 -13.865 -3.743 6.186 1.00 0.35 C ATOM 246 N LEU 17 -12.946 -4.928 9.044 1.00 0.11 N ATOM 247 CA LEU 17 -12.687 -6.060 9.966 1.00 0.14 C ATOM 248 C LEU 17 -13.476 -6.122 11.199 1.00 0.07 C ATOM 249 O LEU 17 -13.181 -7.114 11.831 1.00 0.17 O ATOM 250 CB LEU 17 -11.158 -5.968 10.155 1.00 0.08 C ATOM 251 CG LEU 17 -10.484 -6.350 8.829 1.00 0.22 C ATOM 252 CD1 LEU 17 -10.419 -5.250 7.773 1.00 0.16 C ATOM 253 CD2 LEU 17 -9.270 -7.248 8.943 1.00 0.18 C ATOM 265 N ASN 18 -14.349 -5.246 11.574 1.00 0.37 N ATOM 266 CA ASN 18 -15.321 -5.421 12.620 1.00 0.19 C ATOM 267 C ASN 18 -16.365 -6.578 12.159 1.00 0.15 C ATOM 268 O ASN 18 -16.554 -7.659 12.756 1.00 0.25 O ATOM 269 CB ASN 18 -16.174 -4.224 12.884 1.00 0.06 C ATOM 270 CG ASN 18 -15.251 -3.168 13.451 1.00 0.04 C ATOM 271 OD1 ASN 18 -14.554 -3.384 14.419 1.00 0.03 O ATOM 272 ND2 ASN 18 -15.233 -1.956 12.823 1.00 0.09 N ATOM 279 N GLU 19 -16.984 -6.264 11.052 1.00 0.35 N ATOM 280 CA GLU 19 -17.745 -7.066 10.230 1.00 0.81 C ATOM 281 C GLU 19 -17.327 -7.957 9.145 1.00 0.48 C ATOM 282 O GLU 19 -18.144 -8.239 8.300 1.00 0.37 O ATOM 283 CB GLU 19 -19.342 -6.654 10.388 1.00 0.31 C ATOM 284 CG GLU 19 -20.070 -6.355 11.807 1.00 0.15 C ATOM 285 CD GLU 19 -21.395 -5.525 11.684 1.00 0.06 C ATOM 286 OE1 GLU 19 -22.350 -5.959 10.985 1.00 0.01 O ATOM 287 OE2 GLU 19 -21.507 -4.416 12.274 1.00 0.02 O ATOM 294 N ALA 20 -16.116 -8.326 8.863 1.00 0.58 N ATOM 295 CA ALA 20 -16.022 -9.246 7.828 1.00 0.30 C ATOM 296 C ALA 20 -14.515 -9.324 7.518 1.00 0.17 C ATOM 297 O ALA 20 -13.994 -8.595 6.674 1.00 0.20 O ATOM 298 CB ALA 20 -16.612 -8.967 6.314 1.00 0.14 C ATOM 304 N ASP 21 -13.909 -10.150 8.268 1.00 0.48 N ATOM 305 CA ASP 21 -12.590 -10.675 8.107 1.00 0.66 C ATOM 306 C ASP 21 -11.757 -11.524 7.193 1.00 0.25 C ATOM 307 O ASP 21 -12.460 -12.415 6.811 1.00 0.31 O ATOM 308 CB ASP 21 -12.251 -11.070 9.678 1.00 0.24 C ATOM 309 CG ASP 21 -10.886 -11.577 10.275 1.00 0.15 C ATOM 314 OD1 ASP 21 -10.308 -10.923 11.183 1.00 0.46 O ATOM 315 OD2 ASP 21 -10.367 -12.638 9.839 1.00 0.46 O ATOM 316 N GLY 22 -10.555 -11.378 6.636 1.00 0.58 N ATOM 317 CA GLY 22 -10.614 -10.418 5.532 1.00 1.50 C ATOM 318 C GLY 22 -10.662 -10.734 4.159 1.00 0.35 C ATOM 319 O GLY 22 -11.747 -10.979 3.613 1.00 0.77 O ATOM 323 N ILE 23 -9.811 -10.053 3.514 1.00 0.66 N ATOM 324 CA ILE 23 -9.971 -9.936 2.040 1.00 1.27 C ATOM 325 C ILE 23 -9.441 -8.972 1.294 1.00 0.77 C ATOM 326 O ILE 23 -8.747 -8.106 1.700 1.00 0.87 O ATOM 327 CB ILE 23 -11.100 -8.463 2.703 1.00 0.80 C ATOM 331 CG1 ILE 23 -12.215 -8.042 1.682 1.00 0.46 C ATOM 334 CG2 ILE 23 -10.470 -7.160 3.357 1.00 0.46 C ATOM 338 CD1 ILE 23 -13.225 -9.210 1.432 1.00 0.46 C ATOM 342 N SER 24 -9.728 -9.316 0.041 1.00 0.33 N ATOM 343 CA SER 24 -8.736 -9.132 -0.962 1.00 0.30 C ATOM 344 C SER 24 -8.651 -7.615 -0.889 1.00 0.20 C ATOM 345 O SER 24 -9.548 -6.943 -0.334 1.00 0.13 O ATOM 346 CB SER 24 -9.250 -9.736 -2.211 1.00 0.14 C ATOM 347 OG SER 24 -10.424 -8.919 -2.642 1.00 0.06 O ATOM 353 N ILE 25 -7.604 -7.134 -1.451 1.00 0.28 N ATOM 354 CA ILE 25 -7.499 -5.813 -1.903 1.00 0.15 C ATOM 355 C ILE 25 -8.665 -5.290 -2.728 1.00 0.11 C ATOM 356 O ILE 25 -9.090 -4.118 -2.643 1.00 0.16 O ATOM 357 CB ILE 25 -6.216 -5.814 -2.871 1.00 0.22 C ATOM 358 CG1 ILE 25 -5.952 -4.492 -3.638 1.00 0.03 C ATOM 359 CD1 ILE 25 -5.418 -3.479 -2.598 1.00 0.13 C ATOM 365 CG2 ILE 25 -5.525 -7.057 -3.592 1.00 0.46 C ATOM 372 N PRO 26 -9.188 -6.214 -3.511 1.00 0.48 N ATOM 373 CA PRO 26 -10.395 -6.053 -4.213 1.00 0.87 C ATOM 374 C PRO 26 -11.645 -5.562 -3.675 1.00 0.51 C ATOM 375 O PRO 26 -12.287 -4.551 -4.073 1.00 0.35 O ATOM 376 CB PRO 26 -10.326 -6.608 -5.746 1.00 0.37 C ATOM 380 CG PRO 26 -9.290 -7.708 -5.535 1.00 0.46 C ATOM 383 CD PRO 26 -8.395 -7.058 -4.449 1.00 0.46 C ATOM 386 N GLU 27 -11.893 -6.331 -2.585 1.00 0.39 N ATOM 387 CA GLU 27 -12.978 -6.183 -1.679 1.00 0.69 C ATOM 388 C GLU 27 -12.891 -4.922 -0.994 1.00 0.42 C ATOM 389 O GLU 27 -13.873 -4.193 -0.991 1.00 0.32 O ATOM 390 CB GLU 27 -13.679 -7.598 -1.601 1.00 0.20 C ATOM 391 CG GLU 27 -14.118 -8.485 -2.852 1.00 0.11 C ATOM 392 CD GLU 27 -13.350 -9.832 -2.914 1.00 0.03 C ATOM 399 OE1 GLU 27 -12.666 -10.121 -3.930 1.00 0.46 O ATOM 400 OE2 GLU 27 -13.422 -10.647 -1.956 1.00 0.46 O ATOM 401 N LEU 28 -11.718 -4.460 -0.592 1.00 0.44 N ATOM 402 CA LEU 28 -11.407 -2.994 -0.130 1.00 0.58 C ATOM 403 C LEU 28 -11.747 -1.965 -0.908 1.00 0.27 C ATOM 404 O LEU 28 -12.446 -1.010 -0.461 1.00 0.26 O ATOM 405 CB LEU 28 -10.083 -3.477 0.472 1.00 0.28 C ATOM 406 CG LEU 28 -10.035 -2.730 1.820 1.00 0.40 C ATOM 407 CD1 LEU 28 -11.206 -2.618 2.823 1.00 0.18 C ATOM 408 CD2 LEU 28 -8.651 -2.422 2.305 1.00 0.13 C ATOM 420 N ALA 29 -11.189 -2.112 -2.012 1.00 0.28 N ATOM 421 CA ALA 29 -11.392 -1.280 -2.963 1.00 0.26 C ATOM 422 C ALA 29 -12.835 -0.929 -3.348 1.00 0.17 C ATOM 423 O ALA 29 -13.281 0.238 -3.358 1.00 0.26 O ATOM 424 CB ALA 29 -10.450 -1.331 -4.187 1.00 0.32 C ATOM 430 N ARG 30 -13.602 -1.938 -3.537 1.00 0.42 N ATOM 431 CA ARG 30 -14.982 -1.823 -3.687 1.00 0.44 C ATOM 432 C ARG 30 -15.750 -1.047 -2.593 1.00 0.10 C ATOM 433 O ARG 30 -16.449 -0.038 -2.846 1.00 0.10 O ATOM 434 CB ARG 30 -15.472 -2.844 -4.406 1.00 0.21 C ATOM 435 CG ARG 30 -14.932 -2.930 -5.866 1.00 0.05 C ATOM 436 CD ARG 30 -15.083 -4.412 -6.242 1.00 0.06 C ATOM 437 NE ARG 30 -14.906 -4.608 -7.617 1.00 0.03 N ATOM 438 CZ ARG 30 -14.766 -5.876 -8.143 1.00 0.03 C ATOM 439 NH1 ARG 30 -14.740 -6.934 -7.360 1.00 0.04 H ATOM 440 NH2 ARG 30 -14.647 -6.013 -9.441 1.00 0.01 H ATOM 454 N LYS 31 -15.533 -1.516 -1.436 1.00 0.22 N ATOM 455 CA LYS 31 -16.306 -1.284 -0.301 1.00 0.13 C ATOM 456 C LYS 31 -16.090 0.066 0.329 1.00 0.16 C ATOM 457 O LYS 31 -16.990 0.672 0.900 1.00 0.35 O ATOM 458 CB LYS 31 -15.929 -2.410 0.665 1.00 0.26 C ATOM 459 CG LYS 31 -16.164 -3.827 -0.068 1.00 0.16 C ATOM 460 CD LYS 31 -17.485 -4.593 0.135 1.00 0.15 C ATOM 469 CE LYS 31 -17.846 -5.551 -1.047 1.00 0.46 C ATOM 472 NZ LYS 31 -18.243 -4.742 -2.289 1.00 0.46 N ATOM 476 N VAL 32 -14.914 0.546 0.162 1.00 0.12 N ATOM 477 CA VAL 32 -14.458 1.837 0.611 1.00 0.17 C ATOM 478 C VAL 32 -14.407 2.772 -0.394 1.00 0.19 C ATOM 479 O VAL 32 -14.414 3.930 0.012 1.00 0.34 O ATOM 480 CB VAL 32 -13.139 1.480 1.106 1.00 0.67 C ATOM 484 CG1 VAL 32 -13.496 0.198 2.097 1.00 0.46 C ATOM 485 CG2 VAL 32 -12.175 1.289 -0.190 1.00 0.46 C ATOM 492 N ASN 33 -14.269 2.359 -1.617 1.00 0.40 N ATOM 493 CA ASN 33 -13.909 3.357 -2.546 1.00 0.62 C ATOM 494 C ASN 33 -12.765 4.306 -2.747 1.00 0.30 C ATOM 495 O ASN 33 -13.029 5.221 -3.509 1.00 0.24 O ATOM 496 CB ASN 33 -15.312 4.345 -2.888 1.00 0.35 C ATOM 497 CG ASN 33 -16.830 3.985 -2.738 1.00 0.17 C ATOM 502 OD1 ASN 33 -17.274 3.012 -3.303 1.00 0.46 O ATOM 503 ND2 ASN 33 -17.666 4.756 -1.947 1.00 0.46 N ATOM 506 N LEU 34 -11.688 4.447 -1.991 1.00 0.47 N ATOM 507 CA LEU 34 -10.443 4.544 -2.620 1.00 0.55 C ATOM 508 C LEU 34 -10.076 3.916 -3.947 1.00 0.45 C ATOM 509 O LEU 34 -10.195 2.753 -4.366 1.00 0.89 O ATOM 510 CB LEU 34 -9.916 3.453 -1.605 1.00 0.48 C ATOM 511 CG LEU 34 -10.056 3.790 -0.108 1.00 0.35 C ATOM 512 CD1 LEU 34 -8.964 4.364 0.393 1.00 0.19 C ATOM 513 CD2 LEU 34 -10.986 3.350 0.934 1.00 0.41 C ATOM 525 N SER 35 -9.219 4.774 -4.429 1.00 0.13 N ATOM 526 CA SER 35 -8.632 4.641 -5.597 1.00 0.25 C ATOM 527 C SER 35 -7.512 3.717 -5.584 1.00 0.19 C ATOM 528 O SER 35 -7.099 3.468 -4.473 1.00 0.09 O ATOM 529 CB SER 35 -8.321 5.973 -5.927 1.00 0.43 C ATOM 530 OG SER 35 -7.145 6.516 -5.105 1.00 0.22 O ATOM 536 N VAL 36 -7.197 3.019 -6.609 1.00 0.43 N ATOM 537 CA VAL 36 -6.093 2.143 -6.706 1.00 0.39 C ATOM 538 C VAL 36 -4.650 2.616 -6.332 1.00 0.18 C ATOM 539 O VAL 36 -3.832 1.898 -5.713 1.00 0.45 O ATOM 540 CB VAL 36 -6.453 0.951 -7.521 1.00 0.43 C ATOM 544 CG1 VAL 36 -7.808 0.259 -7.117 1.00 0.46 C ATOM 545 CG2 VAL 36 -5.312 -0.121 -7.539 1.00 0.46 C ATOM 552 N GLU 37 -4.493 3.891 -6.515 1.00 0.37 N ATOM 553 CA GLU 37 -3.353 4.578 -6.003 1.00 0.39 C ATOM 554 C GLU 37 -3.328 4.956 -4.642 1.00 0.17 C ATOM 555 O GLU 37 -2.259 4.802 -4.057 1.00 0.14 O ATOM 556 CB GLU 37 -3.110 5.923 -6.854 1.00 0.28 C ATOM 561 CG GLU 37 -4.243 6.344 -7.848 1.00 0.46 C ATOM 564 CD GLU 37 -3.894 7.664 -8.562 1.00 0.46 C ATOM 565 OE1 GLU 37 -4.641 8.669 -8.431 1.00 0.46 O ATOM 566 OE2 GLU 37 -2.864 7.739 -9.283 1.00 0.46 O ATOM 567 N SER 38 -4.452 5.423 -4.157 1.00 0.43 N ATOM 568 CA SER 38 -4.595 5.568 -2.755 1.00 0.46 C ATOM 569 C SER 38 -4.265 4.286 -2.109 1.00 0.53 C ATOM 570 O SER 38 -3.537 4.364 -1.134 1.00 0.52 O ATOM 571 CB SER 38 -5.720 6.328 -2.325 1.00 0.12 C ATOM 576 OG SER 38 -5.814 7.454 -3.304 1.00 0.46 O ATOM 578 N THR 39 -5.049 3.220 -2.307 1.00 0.21 N ATOM 579 CA THR 39 -4.653 1.868 -1.998 1.00 0.68 C ATOM 580 C THR 39 -3.385 1.508 -1.755 1.00 0.16 C ATOM 581 O THR 39 -3.085 1.049 -0.644 1.00 0.52 O ATOM 582 CB THR 39 -5.760 0.938 -1.572 1.00 0.36 C ATOM 586 OG1 THR 39 -5.223 -0.456 -1.814 1.00 0.46 O ATOM 588 CG2 THR 39 -7.095 0.981 -2.387 1.00 0.46 C ATOM 592 N ALA 40 -2.717 1.483 -2.793 1.00 0.54 N ATOM 593 CA ALA 40 -1.483 1.016 -2.745 1.00 0.39 C ATOM 594 C ALA 40 -0.681 1.853 -1.692 1.00 0.31 C ATOM 595 O ALA 40 0.139 1.225 -0.987 1.00 0.41 O ATOM 596 CB ALA 40 -0.972 1.278 -4.102 1.00 0.26 C ATOM 602 N LEU 41 -0.702 3.151 -1.733 1.00 0.40 N ATOM 603 CA LEU 41 0.056 3.930 -0.858 1.00 0.36 C ATOM 604 C LEU 41 -0.363 3.747 0.551 1.00 0.30 C ATOM 605 O LEU 41 0.621 3.862 1.326 1.00 0.42 O ATOM 606 CB LEU 41 -0.297 5.454 -1.192 1.00 0.13 C ATOM 607 CG LEU 41 0.412 5.797 -2.537 1.00 0.14 C ATOM 608 CD1 LEU 41 -0.040 7.076 -3.281 1.00 0.30 C ATOM 613 CD2 LEU 41 1.979 5.865 -2.361 1.00 0.46 C ATOM 621 N ALA 42 -1.595 3.448 0.935 1.00 1.01 N ATOM 622 CA ALA 42 -1.500 3.598 2.315 1.00 0.47 C ATOM 623 C ALA 42 -2.104 2.566 2.986 1.00 1.32 C ATOM 624 O ALA 42 -2.183 2.825 4.147 1.00 0.77 O ATOM 625 CB ALA 42 -1.897 4.992 2.300 1.00 0.30 C ATOM 631 N VAL 43 -1.313 1.453 2.241 1.00 0.41 N ATOM 632 CA VAL 43 -1.026 -0.038 2.079 1.00 0.24 C ATOM 633 C VAL 43 -1.182 -0.238 3.218 1.00 1.86 C ATOM 634 O VAL 43 -0.190 -0.264 3.883 1.00 1.26 O ATOM 635 CB VAL 43 -0.875 -1.135 1.033 1.00 0.27 C ATOM 639 CG1 VAL 43 0.500 -1.848 1.254 1.00 0.46 C ATOM 640 CG2 VAL 43 -1.996 -2.246 0.979 1.00 0.46 C ATOM 647 CA GLY 44 -4.483 -0.340 2.994 1.00 0.97 C ATOM 648 N GLY 44 -2.794 -0.489 3.607 1.00 0.46 N ATOM 652 C GLY 44 -4.469 0.819 3.970 1.00 0.46 C ATOM 653 O GLY 44 -4.449 0.566 5.174 1.00 0.46 O ATOM 654 CA TRP 45 -5.327 2.902 4.442 1.00 0.61 C ATOM 655 N TRP 45 -4.499 2.035 3.585 1.00 0.46 N ATOM 658 C TRP 45 -6.600 3.398 3.910 1.00 0.46 C ATOM 659 O TRP 45 -7.337 3.848 4.761 1.00 0.46 O ATOM 660 CB TRP 45 -4.483 3.700 5.538 1.00 0.46 C ATOM 663 CG TRP 45 -3.340 3.178 6.418 1.00 0.46 C ATOM 664 CD1 TRP 45 -3.354 2.077 7.274 1.00 0.46 C ATOM 665 CD2 TRP 45 -2.098 3.793 6.629 1.00 0.46 C ATOM 666 NE1 TRP 45 -2.155 1.983 7.897 1.00 0.46 N ATOM 667 CE2 TRP 45 -1.380 3.009 7.505 1.00 0.46 C ATOM 668 CE3 TRP 45 -1.546 4.977 6.117 1.00 0.46 C ATOM 669 CZ2 TRP 45 -0.066 3.323 7.871 1.00 0.46 C ATOM 670 CZ3 TRP 45 -0.225 5.310 6.461 1.00 0.46 C ATOM 671 CH2 TRP 45 0.516 4.482 7.326 1.00 0.46 H ATOM 678 CA LEU 46 -7.297 4.897 2.146 1.00 1.11 C ATOM 679 N LEU 46 -6.824 3.519 2.667 1.00 0.46 N ATOM 682 C LEU 46 -7.541 6.478 2.413 1.00 0.46 C ATOM 683 O LEU 46 -8.694 6.981 2.215 1.00 0.46 O ATOM 684 CB LEU 46 -5.539 5.117 2.162 1.00 0.46 C ATOM 687 CG LEU 46 -4.327 6.294 1.794 1.00 0.46 C ATOM 688 CD1 LEU 46 -3.814 7.720 2.237 1.00 0.46 C ATOM 689 CD2 LEU 46 -3.734 6.381 0.377 1.00 0.46 C ATOM 697 CA ALA 47 -6.233 7.743 0.956 1.00 1.24 C ATOM 698 N ALA 47 -6.536 7.259 2.338 1.00 0.46 N ATOM 701 C ALA 47 -6.588 9.063 0.040 1.00 0.46 C ATOM 702 O ALA 47 -6.352 10.234 0.435 1.00 0.46 O ATOM 703 CB ALA 47 -7.056 6.719 -0.008 1.00 0.46 C ATOM 707 CA ARG 48 -8.450 9.354 -1.442 1.00 1.34 C ATOM 708 N ARG 48 -7.132 8.896 -1.162 1.00 0.46 N ATOM 711 C ARG 48 -9.468 9.421 -0.323 1.00 0.46 C ATOM 712 O ARG 48 -9.512 8.460 0.424 1.00 0.46 O ATOM 713 CB ARG 48 -8.865 10.095 -2.773 1.00 0.46 C ATOM 716 CG ARG 48 -8.650 9.386 -4.169 1.00 0.46 C ATOM 719 CD ARG 48 -7.331 9.686 -4.959 1.00 0.46 C ATOM 722 NE ARG 48 -7.261 11.016 -5.423 1.00 0.46 N ATOM 724 CZ ARG 48 -6.134 11.511 -6.084 1.00 0.46 C ATOM 725 NH1 ARG 48 -5.034 10.801 -6.206 1.00 0.46 H ATOM 726 NH2 ARG 48 -6.166 12.717 -6.592 1.00 0.46 H ATOM 731 CA GLU 49 -9.838 10.930 1.270 1.00 0.53 C ATOM 732 N GLU 49 -10.244 10.396 -0.052 1.00 0.46 N ATOM 735 C GLU 49 -8.829 12.091 0.808 1.00 0.46 C ATOM 736 O GLU 49 -7.562 12.319 0.879 1.00 0.46 O ATOM 737 CB GLU 49 -9.998 9.944 2.499 1.00 0.46 C ATOM 740 CG GLU 49 -11.350 9.116 2.252 1.00 0.46 C ATOM 743 CD GLU 49 -11.586 7.731 2.845 1.00 0.46 C ATOM 744 OE1 GLU 49 -12.300 7.597 3.872 1.00 0.46 O ATOM 745 OE2 GLU 49 -11.203 6.716 2.210 1.00 0.46 O ATOM 746 CA ASN 50 -9.223 14.135 0.098 1.00 1.64 C ATOM 747 N ASN 50 -9.599 12.851 0.192 1.00 0.46 N ATOM 750 C ASN 50 -9.124 14.996 1.263 1.00 0.46 C ATOM 751 O ASN 50 -9.494 16.089 0.910 1.00 0.46 O ATOM 752 CB ASN 50 -10.114 14.537 -1.164 1.00 0.46 C ATOM 755 CG ASN 50 -10.365 13.459 -2.289 1.00 0.46 C ATOM 756 OD1 ASN 50 -11.204 12.604 -2.157 1.00 0.46 O ATOM 757 ND2 ASN 50 -9.634 13.459 -3.459 1.00 0.46 N ATOM 760 CA LYS 51 -8.148 15.839 3.123 1.00 1.19 C ATOM 761 N LYS 51 -8.506 14.784 2.397 1.00 0.46 N ATOM 764 C LYS 51 -7.116 16.959 2.694 1.00 0.46 C ATOM 765 O LYS 51 -7.436 18.178 2.726 1.00 0.46 O ATOM 766 CB LYS 51 -8.597 15.824 4.647 1.00 0.46 C ATOM 769 CG LYS 51 -8.251 14.566 5.469 1.00 0.46 C ATOM 772 CD LYS 51 -9.382 13.637 5.972 1.00 0.46 C ATOM 775 CE LYS 51 -10.421 14.197 6.976 1.00 0.46 C ATOM 778 NZ LYS 51 -11.471 14.993 6.219 1.00 0.46 N ATOM 782 CA VAL 52 -5.317 17.192 1.179 1.00 2.08 C ATOM 783 N VAL 52 -5.996 16.546 2.225 1.00 0.46 N ATOM 786 C VAL 52 -6.257 16.658 0.102 1.00 0.46 C ATOM 787 O VAL 52 -6.875 15.585 0.263 1.00 0.46 O ATOM 788 CB VAL 52 -4.881 18.686 1.111 1.00 0.46 C ATOM 790 CG1 VAL 52 -4.031 19.139 2.336 1.00 0.46 C ATOM 791 CG2 VAL 52 -4.060 18.972 -0.215 1.00 0.46 C ATOM 798 CA VAL 53 -7.328 17.188 -1.824 1.00 0.88 C ATOM 799 N VAL 53 -6.472 17.419 -0.858 1.00 0.46 N ATOM 802 C VAL 53 -8.433 18.106 -1.796 1.00 0.46 C ATOM 803 O VAL 53 -8.112 19.295 -1.894 1.00 0.46 O ATOM 804 CB VAL 53 -7.260 16.060 -2.964 1.00 0.46 C ATOM 806 CG1 VAL 53 -8.359 16.182 -4.098 1.00 0.46 C ATOM 807 CG2 VAL 53 -5.910 16.006 -3.797 1.00 0.46 C ATOM 814 CA ILE 54 -10.796 18.444 -1.840 1.00 1.27 C ATOM 815 N ILE 54 -9.615 17.632 -1.683 1.00 0.46 N ATOM 818 C ILE 54 -11.395 18.949 -0.703 1.00 0.46 C ATOM 819 O ILE 54 -12.450 19.524 -0.936 1.00 0.46 O ATOM 820 CB ILE 54 -10.550 19.859 -2.662 1.00 0.46 C ATOM 822 CG1 ILE 54 -11.524 21.132 -2.746 1.00 0.46 C ATOM 825 CG2 ILE 54 -9.990 19.657 -4.107 1.00 0.46 C ATOM 829 CD1 ILE 54 -10.833 22.491 -3.142 1.00 0.46 C ATOM 833 CA GLU 55 -11.168 19.699 1.380 1.00 0.98 C ATOM 834 N GLU 55 -10.751 18.940 0.396 1.00 0.46 N ATOM 837 C GLU 55 -12.398 19.234 2.195 1.00 0.46 C ATOM 838 O GLU 55 -13.125 20.041 2.785 1.00 0.46 O ATOM 839 CB GLU 55 -10.563 21.170 1.297 1.00 0.46 C ATOM 842 CG GLU 55 -11.315 22.395 1.923 1.00 0.46 C ATOM 845 CD GLU 55 -11.691 23.414 0.832 1.00 0.46 C ATOM 846 OE1 GLU 55 -10.787 23.978 0.158 1.00 0.46 O ATOM 847 OE2 GLU 55 -12.898 23.684 0.609 1.00 0.46 O ATOM 848 CA ARG 56 -13.284 17.250 3.096 1.00 1.28 C ATOM 849 N ARG 56 -12.529 17.948 2.275 1.00 0.46 N ATOM 852 C ARG 56 -13.131 17.504 4.619 1.00 0.46 C ATOM 853 O ARG 56 -14.167 17.417 5.292 1.00 0.46 O ATOM 854 CB ARG 56 -14.670 16.932 2.562 1.00 0.46 C ATOM 857 CG ARG 56 -15.300 18.154 1.866 1.00 0.46 C ATOM 860 CD ARG 56 -15.851 19.129 2.863 1.00 0.46 C ATOM 863 NE ARG 56 -16.502 20.143 2.170 1.00 0.46 N ATOM 865 CZ ARG 56 -16.323 21.458 2.432 1.00 0.46 C ATOM 866 NH1 ARG 56 -17.359 22.223 2.600 1.00 0.46 H ATOM 867 NH2 ARG 56 -15.133 21.961 2.375 1.00 0.46 H ATOM 872 CA LYS 57 -11.853 18.317 6.489 1.00 0.87 C ATOM 873 N LYS 57 -11.966 17.739 5.188 1.00 0.46 N ATOM 876 C LYS 57 -12.025 19.768 6.562 1.00 0.46 C ATOM 877 O LYS 57 -11.049 20.466 6.260 1.00 0.46 O ATOM 878 CB LYS 57 -10.394 18.025 7.045 1.00 0.46 C ATOM 881 CG LYS 57 -10.031 18.670 8.431 1.00 0.46 C ATOM 884 CD LYS 57 -8.961 17.816 9.197 1.00 0.46 C ATOM 887 CE LYS 57 -9.630 16.675 10.032 1.00 0.46 C ATOM 890 NZ LYS 57 -8.676 15.490 10.204 1.00 0.46 N ATOM 894 CA ASN 58 -13.465 21.436 7.076 1.00 1.37 C ATOM 895 N ASN 58 -13.140 20.169 7.050 1.00 0.46 N ATOM 898 C ASN 58 -13.760 22.054 5.640 1.00 0.46 C ATOM 899 O ASN 58 -14.047 21.364 4.621 1.00 0.46 O ATOM 900 CB ASN 58 -12.769 22.300 8.192 1.00 0.46 C ATOM 903 CG ASN 58 -11.299 22.686 7.948 1.00 0.46 C ATOM 904 OD1 ASN 58 -10.434 22.249 8.670 1.00 0.46 O ATOM 905 ND2 ASN 58 -10.961 23.555 6.927 1.00 0.46 N ATOM 908 CA GLY 59 -14.475 24.035 4.574 1.00 1.35 C ATOM 909 N GLY 59 -13.776 23.336 5.614 1.00 0.46 N ATOM 913 C GLY 59 -15.905 24.157 4.649 1.00 0.46 C ATOM 914 O GLY 59 -16.686 23.199 4.808 1.00 0.46 O ATOM 915 CA LEU 60 -17.339 25.590 5.331 1.00 0.84 C ATOM 916 N LEU 60 -16.256 25.348 4.594 1.00 0.46 N ATOM 919 C LEU 60 -18.547 25.386 4.360 1.00 0.46 C ATOM 920 O LEU 60 -19.594 25.639 4.912 1.00 0.46 O ATOM 921 CB LEU 60 -17.243 27.043 5.924 1.00 0.46 C ATOM 924 CG LEU 60 -16.549 27.072 7.339 1.00 0.46 C ATOM 925 CD1 LEU 60 -15.137 26.398 7.351 1.00 0.46 C ATOM 926 CD2 LEU 60 -16.439 28.540 7.858 1.00 0.46 C ATOM 934 CA ILE 61 -19.808 24.378 2.568 1.00 0.50 C ATOM 935 N ILE 61 -18.579 24.883 3.137 1.00 0.46 N ATOM 938 C ILE 61 -20.385 23.086 3.272 1.00 0.46 C ATOM 939 O ILE 61 -21.211 22.410 2.687 1.00 0.46 O ATOM 940 CB ILE 61 -19.938 24.748 1.036 1.00 0.46 C ATOM 942 CG1 ILE 61 -20.050 26.316 0.864 1.00 0.46 C ATOM 945 CG2 ILE 61 -21.134 24.038 0.325 1.00 0.46 C ATOM 949 CD1 ILE 61 -19.634 26.838 -0.544 1.00 0.46 C ATOM 953 CA GLU 62 -21.118 22.122 5.400 1.00 1.09 C ATOM 954 N GLU 62 -20.104 22.752 4.478 1.00 0.46 N ATOM 957 C GLU 62 -20.459 20.890 6.009 1.00 0.46 C ATOM 958 O GLU 62 -21.028 19.798 6.273 1.00 0.46 O ATOM 959 CB GLU 62 -22.652 22.143 5.033 1.00 0.46 C ATOM 962 CG GLU 62 -23.612 21.769 6.216 1.00 0.46 C ATOM 965 CD GLU 62 -23.976 20.271 6.331 1.00 0.46 C ATOM 966 OE1 GLU 62 -23.576 19.438 5.476 1.00 0.46 O ATOM 967 OE2 GLU 62 -24.700 19.884 7.285 1.00 0.46 O ATOM 968 CA ILE 63 -18.265 20.142 6.217 1.00 1.36 C ATOM 969 N ILE 63 -19.215 21.149 6.158 1.00 0.46 N ATOM 972 C ILE 63 -18.250 19.391 4.894 1.00 0.46 C ATOM 973 O ILE 63 -17.706 18.315 5.020 1.00 0.46 O ATOM 974 CB ILE 63 -17.752 19.842 7.690 1.00 0.46 C ATOM 976 CG1 ILE 63 -16.652 18.721 7.781 1.00 0.46 C ATOM 979 CG2 ILE 63 -18.900 19.828 8.768 1.00 0.46 C ATOM 983 CD1 ILE 63 -15.812 18.793 9.095 1.00 0.46 C ATOM 987 CA TYR 64 -19.345 19.061 2.653 1.00 1.63 C ATOM 988 N TYR 64 -18.648 19.895 3.704 1.00 0.46 N ATOM 991 C TYR 64 -19.688 17.683 2.910 1.00 0.46 C ATOM 992 O TYR 64 -19.133 16.690 2.375 1.00 0.46 O ATOM 993 CB TYR 64 -19.996 19.859 1.477 1.00 0.46 C ATOM 996 CG TYR 64 -21.502 20.041 1.299 1.00 0.46 C ATOM 997 CD1 TYR 64 -21.963 20.465 0.039 1.00 0.46 C ATOM 998 CD2 TYR 64 -22.444 19.823 2.316 1.00 0.46 C ATOM 1001 CE1 TYR 64 -23.326 20.653 -0.206 1.00 0.46 C ATOM 1002 CE2 TYR 64 -23.814 19.995 2.071 1.00 0.46 C ATOM 1005 CZ TYR 64 -24.255 20.412 0.810 1.00 0.46 C ATOM 1006 OH TYR 64 -25.528 20.583 0.586 1.00 0.46 H ATOM 1008 CA ASN 65 -21.275 16.481 3.783 1.00 0.63 C ATOM 1009 N ASN 65 -20.651 17.636 3.687 1.00 0.46 N ATOM 1012 C ASN 65 -20.818 15.645 4.985 1.00 0.46 C ATOM 1013 O ASN 65 -20.542 14.441 4.830 1.00 0.46 O ATOM 1014 CB ASN 65 -21.486 15.576 2.420 1.00 0.46 C ATOM 1017 CG ASN 65 -21.561 16.293 0.928 1.00 0.46 C ATOM 1018 OD1 ASN 65 -21.873 17.433 1.220 1.00 0.46 O ATOM 1019 ND2 ASN 65 -21.268 15.406 -1.539 1.00 0.46 N ATOM 1022 CA GLU 66 -20.070 15.701 7.189 1.00 0.55 C ATOM 1023 N GLU 66 -20.737 16.261 6.118 1.00 0.46 N ATOM 1026 C GLU 66 -18.694 14.955 6.927 1.00 0.46 C ATOM 1027 O GLU 66 -18.633 13.773 7.293 1.00 0.46 O ATOM 1028 CB GLU 66 -20.008 16.639 8.385 1.00 0.46 C ATOM 1031 CG GLU 66 -19.688 15.953 9.760 1.00 0.46 C ATOM 1034 CD GLU 66 -18.192 16.010 10.143 1.00 0.46 C ATOM 1035 OE1 GLU 66 -17.329 15.429 9.435 1.00 0.46 O ATOM 1036 OE2 GLU 66 -17.834 16.631 11.177 1.00 0.46 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 493 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 84.46 43.7 126 100.0 126 ARMSMC SECONDARY STRUCTURE . . 82.73 42.7 96 100.0 96 ARMSMC SURFACE . . . . . . . . 87.46 44.4 90 100.0 90 ARMSMC BURIED . . . . . . . . 76.44 41.7 36 100.0 36 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 97.26 23.5 51 100.0 51 ARMSSC1 RELIABLE SIDE CHAINS . 97.28 22.7 44 100.0 44 ARMSSC1 SECONDARY STRUCTURE . . 96.14 23.7 38 100.0 38 ARMSSC1 SURFACE . . . . . . . . 95.48 24.3 37 100.0 37 ARMSSC1 BURIED . . . . . . . . 101.80 21.4 14 100.0 14 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.30 30.0 40 100.0 40 ARMSSC2 RELIABLE SIDE CHAINS . 81.58 29.6 27 100.0 27 ARMSSC2 SECONDARY STRUCTURE . . 88.27 24.1 29 100.0 29 ARMSSC2 SURFACE . . . . . . . . 82.36 28.1 32 100.0 32 ARMSSC2 BURIED . . . . . . . . 76.93 37.5 8 100.0 8 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 94.41 18.8 16 100.0 16 ARMSSC3 RELIABLE SIDE CHAINS . 94.41 18.8 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 89.53 18.2 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 94.41 18.8 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.48 22.2 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 85.48 22.2 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 98.76 16.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 85.48 22.2 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.20 (Number of atoms: 64) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.20 64 100.0 64 CRMSCA CRN = ALL/NP . . . . . 0.1907 CRMSCA SECONDARY STRUCTURE . . 11.67 48 100.0 48 CRMSCA SURFACE . . . . . . . . 12.91 46 100.0 46 CRMSCA BURIED . . . . . . . . 10.19 18 100.0 18 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.18 315 100.0 315 CRMSMC SECONDARY STRUCTURE . . 11.67 237 100.0 237 CRMSMC SURFACE . . . . . . . . 12.82 225 100.0 225 CRMSMC BURIED . . . . . . . . 10.44 90 100.0 90 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 14.05 237 31.5 752 CRMSSC RELIABLE SIDE CHAINS . 14.23 195 27.5 710 CRMSSC SECONDARY STRUCTURE . . 14.08 181 31.2 580 CRMSSC SURFACE . . . . . . . . 14.65 177 32.6 543 CRMSSC BURIED . . . . . . . . 12.08 60 28.7 209 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 13.05 493 48.9 1008 CRMSALL SECONDARY STRUCTURE . . 12.81 373 48.3 772 CRMSALL SURFACE . . . . . . . . 13.67 361 49.7 727 CRMSALL BURIED . . . . . . . . 11.18 132 47.0 281 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.847 0.862 0.431 64 100.0 64 ERRCA SECONDARY STRUCTURE . . 10.421 0.867 0.433 48 100.0 48 ERRCA SURFACE . . . . . . . . 11.527 0.864 0.432 46 100.0 46 ERRCA BURIED . . . . . . . . 9.109 0.856 0.428 18 100.0 18 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.110 0.910 0.455 315 100.0 315 ERRMC SECONDARY STRUCTURE . . 10.642 0.909 0.455 237 100.0 237 ERRMC SURFACE . . . . . . . . 11.733 0.914 0.457 225 100.0 225 ERRMC BURIED . . . . . . . . 9.552 0.900 0.450 90 100.0 90 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.712 0.929 0.465 237 31.5 752 ERRSC RELIABLE SIDE CHAINS . 12.918 0.931 0.466 195 27.5 710 ERRSC SECONDARY STRUCTURE . . 12.771 0.932 0.466 181 31.2 580 ERRSC SURFACE . . . . . . . . 13.275 0.932 0.466 177 32.6 543 ERRSC BURIED . . . . . . . . 11.048 0.922 0.461 60 28.7 209 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.825 0.917 0.459 493 48.9 1008 ERRALL SECONDARY STRUCTURE . . 11.595 0.918 0.459 373 48.3 772 ERRALL SURFACE . . . . . . . . 12.419 0.921 0.460 361 49.7 727 ERRALL BURIED . . . . . . . . 10.201 0.908 0.454 132 47.0 281 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 22 64 64 DISTCA CA (P) 0.00 0.00 0.00 0.00 34.38 64 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 7.86 DISTCA ALL (N) 0 0 2 16 160 493 1008 DISTALL ALL (P) 0.00 0.00 0.20 1.59 15.87 1008 DISTALL ALL (RMS) 0.00 0.00 2.57 3.96 7.66 DISTALL END of the results output