####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 64 ( 493), selected 64 , name T0560TS056_1-D1 # Molecule2: number of CA atoms 64 ( 1008), selected 64 , name T0560-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0560TS056_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 60 3 - 62 4.75 6.63 LONGEST_CONTINUOUS_SEGMENT: 60 4 - 63 5.00 6.59 LCS_AVERAGE: 89.92 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 52 6 - 57 1.87 6.81 LONGEST_CONTINUOUS_SEGMENT: 52 7 - 58 1.84 6.85 LCS_AVERAGE: 69.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 23 - 56 0.99 6.98 LCS_AVERAGE: 36.30 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 64 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 3 K 3 3 3 60 3 3 3 3 3 4 6 10 23 27 34 47 55 55 55 55 56 56 56 57 LCS_GDT K 4 K 4 3 4 60 3 3 3 3 4 14 19 24 37 47 51 53 55 55 55 56 56 56 56 57 LCS_GDT I 5 I 5 3 4 60 3 4 4 4 4 6 11 22 28 42 51 53 55 55 55 56 56 56 56 57 LCS_GDT V 6 V 6 3 52 60 3 4 6 9 13 24 31 38 47 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT G 7 G 7 14 52 60 4 13 22 32 46 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT A 8 A 8 14 52 60 4 10 17 32 46 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT N 9 N 9 14 52 60 7 15 30 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT A 10 A 10 14 52 60 7 15 32 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT G 11 G 11 14 52 60 7 15 38 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT K 12 K 12 14 52 60 7 17 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT V 13 V 13 14 52 60 7 18 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT W 14 W 14 14 52 60 7 22 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT H 15 H 15 14 52 60 7 21 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT A 16 A 16 14 52 60 7 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT L 17 L 17 14 52 60 7 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT N 18 N 18 14 52 60 5 23 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT E 19 E 19 14 52 60 5 23 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT A 20 A 20 20 52 60 5 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT D 21 D 21 20 52 60 1 4 24 45 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT G 22 G 22 31 52 60 5 19 37 45 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT I 23 I 23 34 52 60 7 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT S 24 S 24 34 52 60 7 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT I 25 I 25 34 52 60 6 22 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT P 26 P 26 34 52 60 6 22 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT E 27 E 27 34 52 60 6 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT L 28 L 28 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT A 29 A 29 34 52 60 8 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT R 30 R 30 34 52 60 8 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT K 31 K 31 34 52 60 8 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT V 32 V 32 34 52 60 6 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT N 33 N 33 34 52 60 5 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT L 34 L 34 34 52 60 5 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT S 35 S 35 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT V 36 V 36 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT E 37 E 37 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT S 38 S 38 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT T 39 T 39 34 52 60 5 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT A 40 A 40 34 52 60 5 10 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT L 41 L 41 34 52 60 5 22 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT A 42 A 42 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT V 43 V 43 34 52 60 5 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT G 44 G 44 34 52 60 5 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT W 45 W 45 34 52 60 7 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT L 46 L 46 34 52 60 7 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT A 47 A 47 34 52 60 7 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT R 48 R 48 34 52 60 6 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT E 49 E 49 34 52 60 5 19 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT N 50 N 50 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT K 51 K 51 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT V 52 V 52 34 52 60 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT V 53 V 53 34 52 60 7 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT I 54 I 54 34 52 60 5 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT E 55 E 55 34 52 60 6 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT R 56 R 56 34 52 60 6 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT K 57 K 57 25 52 60 3 6 26 37 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 LCS_GDT N 58 N 58 4 52 60 3 3 5 5 8 10 44 49 51 51 52 53 53 55 55 56 56 56 56 57 LCS_GDT G 59 G 59 4 51 60 3 4 5 5 6 20 37 48 51 51 51 53 53 54 54 56 56 56 56 57 LCS_GDT L 60 L 60 4 5 60 3 4 5 5 5 5 7 9 11 12 25 36 52 54 54 54 54 54 54 55 LCS_GDT I 61 I 61 4 5 60 3 4 5 5 5 5 6 6 7 7 7 9 10 10 12 14 15 19 27 38 LCS_GDT E 62 E 62 5 5 60 3 5 5 5 5 5 6 6 7 7 7 8 9 10 12 14 14 14 16 16 LCS_GDT I 63 I 63 5 5 60 3 5 5 5 5 5 6 6 7 7 7 8 9 10 12 14 14 17 19 20 LCS_GDT Y 64 Y 64 5 5 9 3 5 5 5 5 5 6 6 6 6 7 8 9 10 12 14 15 17 19 20 LCS_GDT N 65 N 65 5 5 7 3 5 5 5 5 5 6 6 6 6 7 7 8 10 12 14 15 17 19 20 LCS_GDT E 66 E 66 5 5 7 0 5 5 5 5 5 6 6 6 6 7 7 7 10 11 14 15 17 19 20 LCS_AVERAGE LCS_A: 65.29 ( 36.30 69.65 89.92 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 24 41 46 49 51 51 51 51 51 52 53 55 55 55 56 56 56 56 57 GDT PERCENT_AT 14.06 37.50 64.06 71.88 76.56 79.69 79.69 79.69 79.69 79.69 81.25 82.81 85.94 85.94 85.94 87.50 87.50 87.50 87.50 89.06 GDT RMS_LOCAL 0.35 0.72 1.02 1.19 1.33 1.51 1.51 1.51 1.51 1.51 1.84 2.15 2.93 2.78 2.78 3.01 3.01 3.01 3.01 3.37 GDT RMS_ALL_AT 6.98 6.95 6.93 6.88 6.85 6.84 6.84 6.84 6.84 6.84 6.85 6.86 6.79 6.73 6.73 6.71 6.71 6.71 6.71 6.72 # Checking swapping # possible swapping detected: E 49 E 49 # possible swapping detected: E 55 E 55 # possible swapping detected: Y 64 Y 64 # possible swapping detected: E 66 E 66 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA K 3 K 3 13.181 0 0.138 0.715 21.654 0.000 0.000 LGA K 4 K 4 10.556 0 0.644 1.104 16.258 0.833 0.370 LGA I 5 I 5 10.389 0 0.549 0.544 13.977 0.714 0.357 LGA V 6 V 6 8.258 0 0.702 0.596 12.147 8.690 4.966 LGA G 7 G 7 3.556 0 0.624 0.624 4.665 45.476 45.476 LGA A 8 A 8 3.747 0 0.099 0.101 4.517 50.238 46.476 LGA N 9 N 9 2.137 0 0.145 1.192 5.729 66.905 55.060 LGA A 10 A 10 1.846 0 0.084 0.082 2.171 72.976 71.333 LGA G 11 G 11 1.474 0 0.058 0.058 1.663 81.548 81.548 LGA K 12 K 12 1.114 0 0.061 0.648 2.866 81.429 78.042 LGA V 13 V 13 1.148 0 0.057 1.172 2.938 83.690 76.803 LGA W 14 W 14 0.726 0 0.046 0.136 1.794 90.595 81.599 LGA H 15 H 15 0.917 0 0.050 0.355 2.574 90.476 80.238 LGA A 16 A 16 0.411 0 0.133 0.129 0.661 100.000 98.095 LGA L 17 L 17 0.947 0 0.062 1.432 3.545 85.952 75.774 LGA N 18 N 18 1.566 0 0.114 1.071 4.580 72.976 68.929 LGA E 19 E 19 1.058 0 0.097 0.666 5.536 90.595 63.492 LGA A 20 A 20 1.042 0 0.595 0.543 2.992 80.000 75.429 LGA D 21 D 21 2.525 0 0.635 1.078 5.549 67.143 48.750 LGA G 22 G 22 2.156 0 0.473 0.473 3.331 61.071 61.071 LGA I 23 I 23 1.061 0 0.079 0.113 1.252 83.690 87.083 LGA S 24 S 24 1.065 0 0.078 0.577 2.480 85.952 81.667 LGA I 25 I 25 1.196 0 0.072 0.629 1.822 83.690 80.417 LGA P 26 P 26 1.550 0 0.086 0.363 1.984 79.286 76.531 LGA E 27 E 27 0.817 0 0.053 0.961 5.035 88.214 69.524 LGA L 28 L 28 0.736 0 0.056 0.103 1.072 88.214 88.214 LGA A 29 A 29 1.124 0 0.105 0.104 1.237 83.690 83.238 LGA R 30 R 30 1.578 0 0.092 0.990 3.106 75.000 70.823 LGA K 31 K 31 1.438 0 0.043 0.836 2.634 79.286 75.926 LGA V 32 V 32 1.405 0 0.131 0.129 1.771 79.286 76.531 LGA N 33 N 33 1.573 0 0.061 0.979 4.082 77.143 65.714 LGA L 34 L 34 0.932 0 0.074 0.084 1.674 88.214 83.810 LGA S 35 S 35 0.427 0 0.045 0.044 0.541 100.000 98.413 LGA V 36 V 36 0.508 0 0.074 0.096 0.817 92.857 91.837 LGA E 37 E 37 0.537 0 0.057 0.340 1.389 92.857 90.529 LGA S 38 S 38 0.738 0 0.061 0.697 2.470 88.214 84.683 LGA T 39 T 39 1.198 0 0.054 0.073 1.680 81.548 80.272 LGA A 40 A 40 1.859 0 0.053 0.052 2.069 72.857 71.238 LGA L 41 L 41 1.394 0 0.077 0.916 2.911 79.286 73.214 LGA A 42 A 42 1.091 0 0.048 0.049 1.574 79.286 79.714 LGA V 43 V 43 1.639 0 0.069 0.068 2.156 77.143 74.150 LGA G 44 G 44 1.399 0 0.086 0.086 1.471 81.429 81.429 LGA W 45 W 45 1.533 0 0.084 1.614 5.578 75.000 61.531 LGA L 46 L 46 1.204 0 0.044 0.139 1.325 83.690 82.560 LGA A 47 A 47 0.750 0 0.108 0.106 0.957 90.476 90.476 LGA R 48 R 48 1.546 0 0.065 1.319 10.712 81.548 42.944 LGA E 49 E 49 1.563 0 0.171 1.056 3.565 77.143 67.037 LGA N 50 N 50 0.797 0 0.092 0.892 4.423 90.476 79.464 LGA K 51 K 51 0.664 0 0.123 0.562 2.864 90.476 82.804 LGA V 52 V 52 0.356 0 0.050 0.058 1.023 92.976 91.905 LGA V 53 V 53 1.243 0 0.117 0.133 1.564 81.548 81.497 LGA I 54 I 54 1.297 0 0.084 0.671 2.446 81.429 76.131 LGA E 55 E 55 0.855 0 0.113 0.789 4.052 88.214 72.804 LGA R 56 R 56 1.713 0 0.265 0.971 8.095 60.714 38.788 LGA K 57 K 57 3.124 0 0.149 1.178 10.083 49.286 35.767 LGA N 58 N 58 8.054 0 0.383 0.500 10.246 6.310 4.464 LGA G 59 G 59 9.593 0 0.298 0.298 13.033 1.310 1.310 LGA L 60 L 60 12.601 0 0.095 0.164 13.931 0.000 0.000 LGA I 61 I 61 17.318 0 0.586 0.799 22.049 0.000 0.000 LGA E 62 E 62 17.971 0 0.563 0.934 19.958 0.000 0.000 LGA I 63 I 63 18.560 0 0.154 0.168 22.098 0.000 0.000 LGA Y 64 Y 64 16.758 0 0.081 0.684 19.582 0.000 0.000 LGA N 65 N 65 18.447 0 0.561 1.078 20.748 0.000 0.000 LGA E 66 E 66 22.620 0 0.679 1.232 24.664 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 64 256 256 100.00 493 493 100.00 64 SUMMARY(RMSD_GDC): 6.470 6.493 7.240 64.360 59.191 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 64 64 4.0 51 1.51 69.141 72.937 3.159 LGA_LOCAL RMSD: 1.514 Number of atoms: 51 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.840 Number of assigned atoms: 64 Std_ASGN_ATOMS RMSD: 6.470 Standard rmsd on all 64 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.906963 * X + 0.107016 * Y + 0.407388 * Z + -9.084788 Y_new = 0.062792 * X + -0.922027 * Y + 0.382000 * Z + 21.119637 Z_new = 0.416503 * X + 0.372040 * Y + 0.829525 * Z + -23.691044 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.072469 -0.429595 0.421604 [DEG: 176.0395 -24.6140 24.1561 ] ZXZ: 2.324043 0.592540 0.841724 [DEG: 133.1579 33.9501 48.2272 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0560TS056_1-D1 REMARK 2: T0560-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0560TS056_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 64 64 4.0 51 1.51 72.937 6.47 REMARK ---------------------------------------------------------- MOLECULE T0560TS056_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0560 REMARK MODEL 1 REMARK PARENT N/A ATOM 17 N LYS 3 -6.181 15.154 17.900 1.00 0.00 N ATOM 18 CA LYS 3 -4.823 15.171 18.359 1.00 0.00 C ATOM 19 C LYS 3 -4.056 14.051 17.747 1.00 0.00 C ATOM 20 O LYS 3 -2.934 14.242 17.280 1.00 0.00 O ATOM 21 CB LYS 3 -4.769 15.022 19.881 1.00 0.00 C ATOM 22 CG LYS 3 -5.277 16.236 20.642 1.00 0.00 C ATOM 23 CD LYS 3 -5.191 16.021 22.144 1.00 0.00 C ATOM 24 CE LYS 3 -5.731 17.221 22.905 1.00 0.00 C ATOM 25 NZ LYS 3 -5.675 17.015 24.378 1.00 0.00 N ATOM 26 N LYS 4 -4.643 12.843 17.721 1.00 0.00 N ATOM 27 CA LYS 4 -3.918 11.750 17.158 1.00 0.00 C ATOM 28 C LYS 4 -3.836 11.980 15.697 1.00 0.00 C ATOM 29 O LYS 4 -4.748 12.537 15.086 1.00 0.00 O ATOM 30 CB LYS 4 -4.634 10.428 17.441 1.00 0.00 C ATOM 31 CG LYS 4 -4.654 10.035 18.910 1.00 0.00 C ATOM 32 CD LYS 4 -5.351 8.699 19.115 1.00 0.00 C ATOM 33 CE LYS 4 -5.368 8.306 20.582 1.00 0.00 C ATOM 34 NZ LYS 4 -6.039 6.994 20.797 1.00 0.00 N ATOM 35 N ILE 5 -2.713 11.562 15.089 1.00 0.00 N ATOM 36 CA ILE 5 -2.627 11.772 13.684 1.00 0.00 C ATOM 37 C ILE 5 -3.184 10.550 13.034 1.00 0.00 C ATOM 38 O ILE 5 -2.475 9.653 12.581 1.00 0.00 O ATOM 39 CB ILE 5 -1.170 11.987 13.234 1.00 0.00 C ATOM 40 CG1 ILE 5 -0.554 13.178 13.972 1.00 0.00 C ATOM 41 CG2 ILE 5 -1.110 12.263 11.739 1.00 0.00 C ATOM 42 CD1 ILE 5 0.944 13.297 13.797 1.00 0.00 C ATOM 43 N VAL 6 -4.526 10.517 12.993 1.00 0.00 N ATOM 44 CA VAL 6 -5.275 9.473 12.372 1.00 0.00 C ATOM 45 C VAL 6 -6.303 10.203 11.585 1.00 0.00 C ATOM 46 O VAL 6 -6.699 11.306 11.958 1.00 0.00 O ATOM 47 CB VAL 6 -5.920 8.542 13.416 1.00 0.00 C ATOM 48 CG1 VAL 6 -4.849 7.847 14.242 1.00 0.00 C ATOM 49 CG2 VAL 6 -6.813 9.335 14.357 1.00 0.00 C ATOM 50 N GLY 7 -6.761 9.625 10.466 1.00 0.00 N ATOM 51 CA GLY 7 -7.701 10.368 9.690 1.00 0.00 C ATOM 52 C GLY 7 -8.969 9.594 9.636 1.00 0.00 C ATOM 53 O GLY 7 -9.001 8.398 9.918 1.00 0.00 O ATOM 54 N ALA 8 -10.057 10.284 9.256 1.00 0.00 N ATOM 55 CA ALA 8 -11.338 9.659 9.154 1.00 0.00 C ATOM 56 C ALA 8 -11.223 8.591 8.114 1.00 0.00 C ATOM 57 O ALA 8 -11.806 7.516 8.247 1.00 0.00 O ATOM 58 CB ALA 8 -12.394 10.675 8.749 1.00 0.00 C ATOM 59 N ASN 9 -10.454 8.871 7.046 1.00 0.00 N ATOM 60 CA ASN 9 -10.277 7.956 5.954 1.00 0.00 C ATOM 61 C ASN 9 -9.656 6.702 6.483 1.00 0.00 C ATOM 62 O ASN 9 -10.076 5.598 6.138 1.00 0.00 O ATOM 63 CB ASN 9 -9.366 8.565 4.886 1.00 0.00 C ATOM 64 CG ASN 9 -10.051 9.662 4.094 1.00 0.00 C ATOM 65 OD1 ASN 9 -11.278 9.744 4.062 1.00 0.00 O ATOM 66 ND2 ASN 9 -9.255 10.509 3.451 1.00 0.00 N ATOM 67 N ALA 10 -8.633 6.850 7.345 1.00 0.00 N ATOM 68 CA ALA 10 -7.964 5.717 7.911 1.00 0.00 C ATOM 69 C ALA 10 -8.967 4.975 8.726 1.00 0.00 C ATOM 70 O ALA 10 -8.996 3.746 8.737 1.00 0.00 O ATOM 71 CB ALA 10 -6.806 6.168 8.787 1.00 0.00 C ATOM 72 N GLY 11 -9.832 5.716 9.436 1.00 0.00 N ATOM 73 CA GLY 11 -10.812 5.080 10.260 1.00 0.00 C ATOM 74 C GLY 11 -11.709 4.248 9.395 1.00 0.00 C ATOM 75 O GLY 11 -12.070 3.130 9.761 1.00 0.00 O ATOM 76 N LYS 12 -12.092 4.770 8.215 1.00 0.00 N ATOM 77 CA LYS 12 -13.011 4.062 7.368 1.00 0.00 C ATOM 78 C LYS 12 -12.414 2.752 6.971 1.00 0.00 C ATOM 79 O LYS 12 -13.062 1.711 7.075 1.00 0.00 O ATOM 80 CB LYS 12 -13.311 4.873 6.107 1.00 0.00 C ATOM 81 CG LYS 12 -14.310 4.215 5.169 1.00 0.00 C ATOM 82 CD LYS 12 -14.616 5.105 3.974 1.00 0.00 C ATOM 83 CE LYS 12 -15.577 4.426 3.012 1.00 0.00 C ATOM 84 NZ LYS 12 -15.867 5.276 1.825 1.00 0.00 N ATOM 85 N VAL 13 -11.145 2.761 6.529 1.00 0.00 N ATOM 86 CA VAL 13 -10.570 1.540 6.055 1.00 0.00 C ATOM 87 C VAL 13 -10.515 0.532 7.152 1.00 0.00 C ATOM 88 O VAL 13 -10.850 -0.630 6.930 1.00 0.00 O ATOM 89 CB VAL 13 -9.136 1.755 5.537 1.00 0.00 C ATOM 90 CG1 VAL 13 -8.476 0.420 5.226 1.00 0.00 C ATOM 91 CG2 VAL 13 -9.149 2.591 4.266 1.00 0.00 C ATOM 92 N TRP 14 -10.104 0.924 8.371 1.00 0.00 N ATOM 93 CA TRP 14 -9.982 -0.103 9.361 1.00 0.00 C ATOM 94 C TRP 14 -11.322 -0.666 9.726 1.00 0.00 C ATOM 95 O TRP 14 -11.461 -1.867 9.944 1.00 0.00 O ATOM 96 CB TRP 14 -9.338 0.454 10.633 1.00 0.00 C ATOM 97 CG TRP 14 -9.170 -0.568 11.715 1.00 0.00 C ATOM 98 CD1 TRP 14 -8.133 -1.442 11.863 1.00 0.00 C ATOM 99 CD2 TRP 14 -10.068 -0.821 12.804 1.00 0.00 C ATOM 100 NE1 TRP 14 -8.326 -2.225 12.975 1.00 0.00 N ATOM 101 CE2 TRP 14 -9.509 -1.862 13.571 1.00 0.00 C ATOM 102 CE3 TRP 14 -11.287 -0.268 13.205 1.00 0.00 C ATOM 103 CZ2 TRP 14 -10.129 -2.363 14.715 1.00 0.00 C ATOM 104 CZ3 TRP 14 -11.898 -0.767 14.339 1.00 0.00 C ATOM 105 CH2 TRP 14 -11.322 -1.803 15.083 1.00 0.00 H ATOM 106 N HIS 15 -12.364 0.181 9.790 1.00 0.00 N ATOM 107 CA HIS 15 -13.664 -0.272 10.193 1.00 0.00 C ATOM 108 C HIS 15 -14.159 -1.296 9.208 1.00 0.00 C ATOM 109 O HIS 15 -14.713 -2.322 9.601 1.00 0.00 O ATOM 110 CB HIS 15 -14.650 0.897 10.236 1.00 0.00 C ATOM 111 CG HIS 15 -16.034 0.505 10.651 1.00 0.00 C ATOM 112 ND1 HIS 15 -16.352 0.157 11.946 1.00 0.00 N ATOM 113 CD2 HIS 15 -17.320 0.370 9.982 1.00 0.00 C ATOM 114 CE1 HIS 15 -17.662 -0.143 12.009 1.00 0.00 C ATOM 115 NE2 HIS 15 -18.249 -0.017 10.834 1.00 0.00 N ATOM 116 N ALA 16 -13.966 -1.047 7.896 1.00 0.00 N ATOM 117 CA ALA 16 -14.449 -1.929 6.867 1.00 0.00 C ATOM 118 C ALA 16 -13.790 -3.268 6.966 1.00 0.00 C ATOM 119 O ALA 16 -14.449 -4.300 6.865 1.00 0.00 O ATOM 120 CB ALA 16 -14.156 -1.350 5.492 1.00 0.00 C ATOM 121 N LEU 17 -12.461 -3.282 7.163 1.00 0.00 N ATOM 122 CA LEU 17 -11.728 -4.512 7.238 1.00 0.00 C ATOM 123 C LEU 17 -12.143 -5.277 8.447 1.00 0.00 C ATOM 124 O LEU 17 -12.237 -6.502 8.405 1.00 0.00 O ATOM 125 CB LEU 17 -10.226 -4.236 7.323 1.00 0.00 C ATOM 126 CG LEU 17 -9.313 -5.462 7.379 1.00 0.00 C ATOM 127 CD1 LEU 17 -9.481 -6.316 6.132 1.00 0.00 C ATOM 128 CD2 LEU 17 -7.854 -5.043 7.476 1.00 0.00 C ATOM 129 N ASN 18 -12.408 -4.569 9.557 1.00 0.00 N ATOM 130 CA ASN 18 -12.715 -5.216 10.795 1.00 0.00 C ATOM 131 C ASN 18 -13.908 -6.108 10.643 1.00 0.00 C ATOM 132 O ASN 18 -13.842 -7.292 10.969 1.00 0.00 O ATOM 133 CB ASN 18 -13.022 -4.181 11.879 1.00 0.00 C ATOM 134 CG ASN 18 -13.264 -4.813 13.236 1.00 0.00 C ATOM 135 OD1 ASN 18 -12.369 -5.433 13.810 1.00 0.00 O ATOM 136 ND2 ASN 18 -14.477 -4.657 13.752 1.00 0.00 N ATOM 137 N GLU 19 -15.028 -5.589 10.108 1.00 0.00 N ATOM 138 CA GLU 19 -16.202 -6.416 10.074 1.00 0.00 C ATOM 139 C GLU 19 -15.978 -7.589 9.180 1.00 0.00 C ATOM 140 O GLU 19 -16.385 -8.705 9.499 1.00 0.00 O ATOM 141 CB GLU 19 -17.400 -5.624 9.549 1.00 0.00 C ATOM 142 CG GLU 19 -17.913 -4.564 10.510 1.00 0.00 C ATOM 143 CD GLU 19 -19.019 -3.718 9.910 1.00 0.00 C ATOM 144 OE1 GLU 19 -19.333 -3.912 8.717 1.00 0.00 O ATOM 145 OE2 GLU 19 -19.571 -2.861 10.632 1.00 0.00 O ATOM 146 N ALA 20 -15.310 -7.366 8.036 1.00 0.00 N ATOM 147 CA ALA 20 -15.037 -8.408 7.089 1.00 0.00 C ATOM 148 C ALA 20 -14.163 -9.421 7.760 1.00 0.00 C ATOM 149 O ALA 20 -14.235 -10.616 7.479 1.00 0.00 O ATOM 150 CB ALA 20 -14.327 -7.842 5.868 1.00 0.00 C ATOM 151 N ASP 21 -13.284 -8.943 8.655 1.00 0.00 N ATOM 152 CA ASP 21 -12.365 -9.752 9.396 1.00 0.00 C ATOM 153 C ASP 21 -11.267 -10.176 8.477 1.00 0.00 C ATOM 154 O ASP 21 -10.200 -10.583 8.931 1.00 0.00 O ATOM 155 CB ASP 21 -13.070 -10.988 9.956 1.00 0.00 C ATOM 156 CG ASP 21 -14.229 -10.636 10.867 1.00 0.00 C ATOM 157 OD1 ASP 21 -14.045 -9.777 11.756 1.00 0.00 O ATOM 158 OD2 ASP 21 -15.320 -11.218 10.695 1.00 0.00 O ATOM 159 N GLY 22 -11.452 -10.003 7.157 1.00 0.00 N ATOM 160 CA GLY 22 -10.394 -10.369 6.265 1.00 0.00 C ATOM 161 C GLY 22 -10.888 -10.137 4.879 1.00 0.00 C ATOM 162 O GLY 22 -11.845 -10.770 4.435 1.00 0.00 O ATOM 163 N ILE 23 -10.233 -9.208 4.161 1.00 0.00 N ATOM 164 CA ILE 23 -10.601 -8.934 2.803 1.00 0.00 C ATOM 165 C ILE 23 -9.338 -8.707 2.047 1.00 0.00 C ATOM 166 O ILE 23 -8.326 -8.301 2.614 1.00 0.00 O ATOM 167 CB ILE 23 -11.500 -7.688 2.702 1.00 0.00 C ATOM 168 CG1 ILE 23 -12.034 -7.530 1.277 1.00 0.00 C ATOM 169 CG2 ILE 23 -10.716 -6.435 3.065 1.00 0.00 C ATOM 170 CD1 ILE 23 -13.153 -6.519 1.153 1.00 0.00 C ATOM 171 N SER 24 -9.356 -8.990 0.734 1.00 0.00 N ATOM 172 CA SER 24 -8.206 -8.692 -0.057 1.00 0.00 C ATOM 173 C SER 24 -8.254 -7.231 -0.361 1.00 0.00 C ATOM 174 O SER 24 -9.305 -6.598 -0.276 1.00 0.00 O ATOM 175 CB SER 24 -8.223 -9.504 -1.354 1.00 0.00 C ATOM 176 OG SER 24 -9.288 -9.098 -2.196 1.00 0.00 O ATOM 177 N ILE 25 -7.092 -6.658 -0.717 1.00 0.00 N ATOM 178 CA ILE 25 -7.042 -5.267 -1.047 1.00 0.00 C ATOM 179 C ILE 25 -7.908 -4.960 -2.244 1.00 0.00 C ATOM 180 O ILE 25 -8.653 -3.987 -2.146 1.00 0.00 O ATOM 181 CB ILE 25 -5.608 -4.817 -1.385 1.00 0.00 C ATOM 182 CG1 ILE 25 -4.724 -4.876 -0.137 1.00 0.00 C ATOM 183 CG2 ILE 25 -5.608 -3.389 -1.909 1.00 0.00 C ATOM 184 CD1 ILE 25 -3.249 -4.714 -0.427 1.00 0.00 C ATOM 185 N PRO 26 -7.908 -5.654 -3.370 1.00 0.00 N ATOM 186 CA PRO 26 -8.769 -5.272 -4.457 1.00 0.00 C ATOM 187 C PRO 26 -10.201 -5.247 -4.025 1.00 0.00 C ATOM 188 O PRO 26 -10.947 -4.393 -4.501 1.00 0.00 O ATOM 189 CB PRO 26 -8.523 -6.346 -5.519 1.00 0.00 C ATOM 190 CG PRO 26 -7.128 -6.810 -5.265 1.00 0.00 C ATOM 191 CD PRO 26 -6.959 -6.823 -3.771 1.00 0.00 C ATOM 192 N GLU 27 -10.612 -6.183 -3.148 1.00 0.00 N ATOM 193 CA GLU 27 -11.973 -6.215 -2.697 1.00 0.00 C ATOM 194 C GLU 27 -12.224 -4.986 -1.891 1.00 0.00 C ATOM 195 O GLU 27 -13.283 -4.372 -2.001 1.00 0.00 O ATOM 196 CB GLU 27 -12.222 -7.455 -1.835 1.00 0.00 C ATOM 197 CG GLU 27 -12.207 -8.762 -2.609 1.00 0.00 C ATOM 198 CD GLU 27 -12.333 -9.975 -1.708 1.00 0.00 C ATOM 199 OE1 GLU 27 -12.361 -9.795 -0.473 1.00 0.00 O ATOM 200 OE2 GLU 27 -12.406 -11.104 -2.238 1.00 0.00 O ATOM 201 N LEU 28 -11.239 -4.590 -1.064 1.00 0.00 N ATOM 202 CA LEU 28 -11.373 -3.428 -0.239 1.00 0.00 C ATOM 203 C LEU 28 -11.534 -2.251 -1.140 1.00 0.00 C ATOM 204 O LEU 28 -12.319 -1.345 -0.870 1.00 0.00 O ATOM 205 CB LEU 28 -10.133 -3.247 0.638 1.00 0.00 C ATOM 206 CG LEU 28 -10.143 -2.048 1.588 1.00 0.00 C ATOM 207 CD1 LEU 28 -11.291 -2.158 2.580 1.00 0.00 C ATOM 208 CD2 LEU 28 -8.842 -1.973 2.371 1.00 0.00 C ATOM 209 N ALA 29 -10.783 -2.245 -2.257 1.00 0.00 N ATOM 210 CA ALA 29 -10.854 -1.139 -3.161 1.00 0.00 C ATOM 211 C ALA 29 -12.259 -1.045 -3.666 1.00 0.00 C ATOM 212 O ALA 29 -12.812 0.049 -3.777 1.00 0.00 O ATOM 213 CB ALA 29 -9.902 -1.347 -4.328 1.00 0.00 C ATOM 214 N ARG 30 -12.878 -2.199 -3.982 1.00 0.00 N ATOM 215 CA ARG 30 -14.209 -2.200 -4.519 1.00 0.00 C ATOM 216 C ARG 30 -15.174 -1.651 -3.511 1.00 0.00 C ATOM 217 O ARG 30 -15.978 -0.775 -3.826 1.00 0.00 O ATOM 218 CB ARG 30 -14.639 -3.623 -4.881 1.00 0.00 C ATOM 219 CG ARG 30 -13.919 -4.201 -6.090 1.00 0.00 C ATOM 220 CD ARG 30 -14.360 -5.629 -6.364 1.00 0.00 C ATOM 221 NE ARG 30 -13.643 -6.216 -7.493 1.00 0.00 N ATOM 222 CZ ARG 30 -13.798 -7.469 -7.906 1.00 0.00 C ATOM 223 NH1 ARG 30 -13.102 -7.917 -8.942 1.00 0.00 H ATOM 224 NH2 ARG 30 -14.649 -8.273 -7.283 1.00 0.00 H ATOM 225 N LYS 31 -15.108 -2.141 -2.256 1.00 0.00 N ATOM 226 CA LYS 31 -16.064 -1.753 -1.254 1.00 0.00 C ATOM 227 C LYS 31 -15.933 -0.290 -0.964 1.00 0.00 C ATOM 228 O LYS 31 -16.929 0.427 -0.868 1.00 0.00 O ATOM 229 CB LYS 31 -15.830 -2.535 0.041 1.00 0.00 C ATOM 230 CG LYS 31 -16.827 -2.220 1.144 1.00 0.00 C ATOM 231 CD LYS 31 -16.584 -3.085 2.370 1.00 0.00 C ATOM 232 CE LYS 31 -17.563 -2.751 3.484 1.00 0.00 C ATOM 233 NZ LYS 31 -17.328 -3.581 4.698 1.00 0.00 N ATOM 234 N VAL 32 -14.684 0.182 -0.814 1.00 0.00 N ATOM 235 CA VAL 32 -14.376 1.553 -0.508 1.00 0.00 C ATOM 236 C VAL 32 -14.713 2.409 -1.689 1.00 0.00 C ATOM 237 O VAL 32 -15.119 3.558 -1.528 1.00 0.00 O ATOM 238 CB VAL 32 -12.883 1.736 -0.179 1.00 0.00 C ATOM 239 CG1 VAL 32 -12.485 0.863 1.002 1.00 0.00 C ATOM 240 CG2 VAL 32 -12.023 1.348 -1.374 1.00 0.00 C ATOM 241 N ASN 33 -14.572 1.854 -2.908 1.00 0.00 N ATOM 242 CA ASN 33 -14.799 2.579 -4.127 1.00 0.00 C ATOM 243 C ASN 33 -13.737 3.623 -4.280 1.00 0.00 C ATOM 244 O ASN 33 -13.982 4.716 -4.789 1.00 0.00 O ATOM 245 CB ASN 33 -16.170 3.258 -4.098 1.00 0.00 C ATOM 246 CG ASN 33 -16.675 3.608 -5.485 1.00 0.00 C ATOM 247 OD1 ASN 33 -16.312 2.965 -6.470 1.00 0.00 O ATOM 248 ND2 ASN 33 -17.515 4.634 -5.565 1.00 0.00 N ATOM 249 N LEU 34 -12.509 3.299 -3.837 1.00 0.00 N ATOM 250 CA LEU 34 -11.396 4.184 -4.015 1.00 0.00 C ATOM 251 C LEU 34 -10.380 3.484 -4.862 1.00 0.00 C ATOM 252 O LEU 34 -10.490 2.289 -5.135 1.00 0.00 O ATOM 253 CB LEU 34 -10.779 4.548 -2.663 1.00 0.00 C ATOM 254 CG LEU 34 -11.705 5.236 -1.658 1.00 0.00 C ATOM 255 CD1 LEU 34 -11.014 5.399 -0.314 1.00 0.00 C ATOM 256 CD2 LEU 34 -12.107 6.616 -2.156 1.00 0.00 C ATOM 257 N SER 35 -9.368 4.243 -5.322 1.00 0.00 N ATOM 258 CA SER 35 -8.363 3.718 -6.197 1.00 0.00 C ATOM 259 C SER 35 -7.526 2.732 -5.445 1.00 0.00 C ATOM 260 O SER 35 -7.321 2.842 -4.238 1.00 0.00 O ATOM 261 CB SER 35 -7.467 4.843 -6.719 1.00 0.00 C ATOM 262 OG SER 35 -8.207 5.765 -7.499 1.00 0.00 O ATOM 263 N VAL 36 -7.024 1.719 -6.177 1.00 0.00 N ATOM 264 CA VAL 36 -6.204 0.691 -5.609 1.00 0.00 C ATOM 265 C VAL 36 -4.934 1.317 -5.131 1.00 0.00 C ATOM 266 O VAL 36 -4.428 0.974 -4.064 1.00 0.00 O ATOM 267 CB VAL 36 -5.872 -0.400 -6.643 1.00 0.00 C ATOM 268 CG1 VAL 36 -4.845 -1.372 -6.081 1.00 0.00 C ATOM 269 CG2 VAL 36 -7.122 -1.184 -7.012 1.00 0.00 C ATOM 270 N GLU 37 -4.386 2.262 -5.920 1.00 0.00 N ATOM 271 CA GLU 37 -3.130 2.866 -5.582 1.00 0.00 C ATOM 272 C GLU 37 -3.277 3.617 -4.294 1.00 0.00 C ATOM 273 O GLU 37 -2.401 3.552 -3.434 1.00 0.00 O ATOM 274 CB GLU 37 -2.690 3.836 -6.680 1.00 0.00 C ATOM 275 CG GLU 37 -2.260 3.158 -7.971 1.00 0.00 C ATOM 276 CD GLU 37 -1.948 4.150 -9.074 1.00 0.00 C ATOM 277 OE1 GLU 37 -2.140 5.364 -8.852 1.00 0.00 O ATOM 278 OE2 GLU 37 -1.514 3.714 -10.161 1.00 0.00 O ATOM 279 N SER 38 -4.398 4.343 -4.120 1.00 0.00 N ATOM 280 CA SER 38 -4.609 5.115 -2.928 1.00 0.00 C ATOM 281 C SER 38 -4.725 4.177 -1.770 1.00 0.00 C ATOM 282 O SER 38 -4.266 4.473 -0.667 1.00 0.00 O ATOM 283 CB SER 38 -5.890 5.942 -3.045 1.00 0.00 C ATOM 284 OG SER 38 -5.772 6.928 -4.056 1.00 0.00 O ATOM 285 N THR 39 -5.351 3.009 -2.000 1.00 0.00 N ATOM 286 CA THR 39 -5.532 2.046 -0.957 1.00 0.00 C ATOM 287 C THR 39 -4.185 1.567 -0.518 1.00 0.00 C ATOM 288 O THR 39 -3.936 1.397 0.675 1.00 0.00 O ATOM 289 CB THR 39 -6.360 0.840 -1.438 1.00 0.00 C ATOM 290 OG1 THR 39 -7.664 1.281 -1.835 1.00 0.00 O ATOM 291 CG2 THR 39 -6.505 -0.185 -0.325 1.00 0.00 C ATOM 292 N ALA 40 -3.275 1.341 -1.485 1.00 0.00 N ATOM 293 CA ALA 40 -1.964 0.844 -1.188 1.00 0.00 C ATOM 294 C ALA 40 -1.243 1.841 -0.333 1.00 0.00 C ATOM 295 O ALA 40 -0.544 1.472 0.608 1.00 0.00 O ATOM 296 CB ALA 40 -1.177 0.624 -2.471 1.00 0.00 C ATOM 297 N LEU 41 -1.385 3.142 -0.630 1.00 0.00 N ATOM 298 CA LEU 41 -0.673 4.091 0.172 1.00 0.00 C ATOM 299 C LEU 41 -1.206 3.994 1.566 1.00 0.00 C ATOM 300 O LEU 41 -0.453 4.003 2.538 1.00 0.00 O ATOM 301 CB LEU 41 -0.877 5.509 -0.366 1.00 0.00 C ATOM 302 CG LEU 41 -0.218 5.825 -1.709 1.00 0.00 C ATOM 303 CD1 LEU 41 -0.648 7.196 -2.210 1.00 0.00 C ATOM 304 CD2 LEU 41 1.298 5.822 -1.578 1.00 0.00 C ATOM 305 N ALA 42 -2.540 3.876 1.684 1.00 0.00 N ATOM 306 CA ALA 42 -3.188 3.823 2.958 1.00 0.00 C ATOM 307 C ALA 42 -2.769 2.594 3.707 1.00 0.00 C ATOM 308 O ALA 42 -2.479 2.667 4.901 1.00 0.00 O ATOM 309 CB ALA 42 -4.699 3.790 2.785 1.00 0.00 C ATOM 310 N VAL 43 -2.706 1.433 3.026 1.00 0.00 N ATOM 311 CA VAL 43 -2.381 0.214 3.711 1.00 0.00 C ATOM 312 C VAL 43 -1.010 0.314 4.288 1.00 0.00 C ATOM 313 O VAL 43 -0.770 -0.144 5.404 1.00 0.00 O ATOM 314 CB VAL 43 -2.420 -0.996 2.759 1.00 0.00 C ATOM 315 CG1 VAL 43 -1.882 -2.238 3.453 1.00 0.00 C ATOM 316 CG2 VAL 43 -3.846 -1.276 2.312 1.00 0.00 C ATOM 317 N GLY 44 -0.069 0.920 3.543 1.00 0.00 N ATOM 318 CA GLY 44 1.281 0.997 4.014 1.00 0.00 C ATOM 319 C GLY 44 1.316 1.787 5.282 1.00 0.00 C ATOM 320 O GLY 44 2.018 1.425 6.225 1.00 0.00 O ATOM 321 N TRP 45 0.562 2.901 5.339 1.00 0.00 N ATOM 322 CA TRP 45 0.594 3.719 6.517 1.00 0.00 C ATOM 323 C TRP 45 0.015 2.925 7.648 1.00 0.00 C ATOM 324 O TRP 45 0.520 2.943 8.767 1.00 0.00 O ATOM 325 CB TRP 45 -0.228 4.993 6.307 1.00 0.00 C ATOM 326 CG TRP 45 -0.235 5.904 7.496 1.00 0.00 C ATOM 327 CD1 TRP 45 0.698 6.848 7.811 1.00 0.00 C ATOM 328 CD2 TRP 45 -1.227 5.958 8.529 1.00 0.00 C ATOM 329 NE1 TRP 45 0.353 7.487 8.977 1.00 0.00 N ATOM 330 CE2 TRP 45 -0.828 6.958 9.437 1.00 0.00 C ATOM 331 CE3 TRP 45 -2.412 5.259 8.776 1.00 0.00 C ATOM 332 CZ2 TRP 45 -1.571 7.277 10.573 1.00 0.00 C ATOM 333 CZ3 TRP 45 -3.146 5.578 9.903 1.00 0.00 C ATOM 334 CH2 TRP 45 -2.726 6.576 10.788 1.00 0.00 H ATOM 335 N LEU 46 -1.071 2.184 7.377 1.00 0.00 N ATOM 336 CA LEU 46 -1.720 1.435 8.413 1.00 0.00 C ATOM 337 C LEU 46 -0.770 0.411 8.952 1.00 0.00 C ATOM 338 O LEU 46 -0.736 0.162 10.155 1.00 0.00 O ATOM 339 CB LEU 46 -2.960 0.726 7.865 1.00 0.00 C ATOM 340 CG LEU 46 -4.139 1.622 7.479 1.00 0.00 C ATOM 341 CD1 LEU 46 -5.224 0.814 6.785 1.00 0.00 C ATOM 342 CD2 LEU 46 -4.745 2.274 8.712 1.00 0.00 C ATOM 343 N ALA 47 0.029 -0.208 8.065 1.00 0.00 N ATOM 344 CA ALA 47 0.951 -1.236 8.455 1.00 0.00 C ATOM 345 C ALA 47 1.984 -0.685 9.394 1.00 0.00 C ATOM 346 O ALA 47 2.315 -1.324 10.392 1.00 0.00 O ATOM 347 CB ALA 47 1.662 -1.803 7.236 1.00 0.00 C ATOM 348 N ARG 48 2.515 0.524 9.117 1.00 0.00 N ATOM 349 CA ARG 48 3.564 1.055 9.948 1.00 0.00 C ATOM 350 C ARG 48 2.995 1.253 11.316 1.00 0.00 C ATOM 351 O ARG 48 3.658 1.032 12.327 1.00 0.00 O ATOM 352 CB ARG 48 4.065 2.390 9.392 1.00 0.00 C ATOM 353 CG ARG 48 4.863 2.264 8.105 1.00 0.00 C ATOM 354 CD ARG 48 5.266 3.629 7.570 1.00 0.00 C ATOM 355 NE ARG 48 6.010 3.528 6.317 1.00 0.00 N ATOM 356 CZ ARG 48 6.416 4.573 5.603 1.00 0.00 C ATOM 357 NH1 ARG 48 7.088 4.384 4.475 1.00 0.00 H ATOM 358 NH2 ARG 48 6.150 5.804 6.018 1.00 0.00 H ATOM 359 N GLU 49 1.721 1.674 11.352 1.00 0.00 N ATOM 360 CA GLU 49 0.975 1.943 12.544 1.00 0.00 C ATOM 361 C GLU 49 0.828 0.651 13.290 1.00 0.00 C ATOM 362 O GLU 49 0.705 0.643 14.514 1.00 0.00 O ATOM 363 CB GLU 49 -0.406 2.504 12.197 1.00 0.00 C ATOM 364 CG GLU 49 -0.377 3.909 11.618 1.00 0.00 C ATOM 365 CD GLU 49 0.262 4.913 12.556 1.00 0.00 C ATOM 366 OE1 GLU 49 -0.157 4.980 13.731 1.00 0.00 O ATOM 367 OE2 GLU 49 1.184 5.633 12.117 1.00 0.00 O ATOM 368 N ASN 50 0.868 -0.480 12.557 1.00 0.00 N ATOM 369 CA ASN 50 0.662 -1.795 13.102 1.00 0.00 C ATOM 370 C ASN 50 -0.803 -2.000 13.323 1.00 0.00 C ATOM 371 O ASN 50 -1.218 -2.889 14.064 1.00 0.00 O ATOM 372 CB ASN 50 1.401 -1.944 14.433 1.00 0.00 C ATOM 373 CG ASN 50 2.908 -1.928 14.268 1.00 0.00 C ATOM 374 OD1 ASN 50 3.433 -2.339 13.234 1.00 0.00 O ATOM 375 ND2 ASN 50 3.608 -1.449 15.291 1.00 0.00 N ATOM 376 N LYS 51 -1.622 -1.153 12.675 1.00 0.00 N ATOM 377 CA LYS 51 -3.048 -1.271 12.717 1.00 0.00 C ATOM 378 C LYS 51 -3.465 -2.467 11.917 1.00 0.00 C ATOM 379 O LYS 51 -4.378 -3.197 12.307 1.00 0.00 O ATOM 380 CB LYS 51 -3.707 -0.021 12.131 1.00 0.00 C ATOM 381 CG LYS 51 -3.561 1.222 12.994 1.00 0.00 C ATOM 382 CD LYS 51 -4.240 2.421 12.356 1.00 0.00 C ATOM 383 CE LYS 51 -4.065 3.672 13.204 1.00 0.00 C ATOM 384 NZ LYS 51 -4.706 4.861 12.578 1.00 0.00 N ATOM 385 N VAL 52 -2.815 -2.708 10.759 1.00 0.00 N ATOM 386 CA VAL 52 -3.235 -3.800 9.927 1.00 0.00 C ATOM 387 C VAL 52 -2.046 -4.627 9.554 1.00 0.00 C ATOM 388 O VAL 52 -0.914 -4.148 9.570 1.00 0.00 O ATOM 389 CB VAL 52 -3.907 -3.300 8.634 1.00 0.00 C ATOM 390 CG1 VAL 52 -5.162 -2.506 8.960 1.00 0.00 C ATOM 391 CG2 VAL 52 -2.959 -2.402 7.855 1.00 0.00 C ATOM 392 N VAL 53 -2.281 -5.918 9.242 1.00 0.00 N ATOM 393 CA VAL 53 -1.237 -6.811 8.840 1.00 0.00 C ATOM 394 C VAL 53 -1.683 -7.457 7.569 1.00 0.00 C ATOM 395 O VAL 53 -2.872 -7.480 7.259 1.00 0.00 O ATOM 396 CB VAL 53 -0.975 -7.889 9.908 1.00 0.00 C ATOM 397 CG1 VAL 53 -0.510 -7.250 11.208 1.00 0.00 C ATOM 398 CG2 VAL 53 -2.242 -8.681 10.189 1.00 0.00 C ATOM 399 N ILE 54 -0.729 -7.990 6.785 1.00 0.00 N ATOM 400 CA ILE 54 -1.091 -8.631 5.557 1.00 0.00 C ATOM 401 C ILE 54 -0.711 -10.065 5.678 1.00 0.00 C ATOM 402 O ILE 54 0.396 -10.397 6.101 1.00 0.00 O ATOM 403 CB ILE 54 -0.361 -8.003 4.355 1.00 0.00 C ATOM 404 CG1 ILE 54 -0.731 -6.524 4.221 1.00 0.00 C ATOM 405 CG2 ILE 54 -0.745 -8.715 3.067 1.00 0.00 C ATOM 406 CD1 ILE 54 0.109 -5.775 3.210 1.00 0.00 C ATOM 407 N GLU 55 -1.651 -10.959 5.330 1.00 0.00 N ATOM 408 CA GLU 55 -1.386 -12.361 5.428 1.00 0.00 C ATOM 409 C GLU 55 -1.692 -12.961 4.100 1.00 0.00 C ATOM 410 O GLU 55 -2.323 -12.336 3.251 1.00 0.00 O ATOM 411 CB GLU 55 -2.262 -12.998 6.508 1.00 0.00 C ATOM 412 CG GLU 55 -1.980 -12.493 7.913 1.00 0.00 C ATOM 413 CD GLU 55 -2.848 -13.165 8.959 1.00 0.00 C ATOM 414 OE1 GLU 55 -3.696 -14.000 8.580 1.00 0.00 O ATOM 415 OE2 GLU 55 -2.681 -12.857 10.158 1.00 0.00 O ATOM 416 N ARG 56 -1.225 -14.199 3.868 1.00 0.00 N ATOM 417 CA ARG 56 -1.484 -14.805 2.600 1.00 0.00 C ATOM 418 C ARG 56 -2.893 -15.297 2.610 1.00 0.00 C ATOM 419 O ARG 56 -3.558 -15.284 3.645 1.00 0.00 O ATOM 420 CB ARG 56 -0.528 -15.974 2.359 1.00 0.00 C ATOM 421 CG ARG 56 0.933 -15.569 2.248 1.00 0.00 C ATOM 422 CD ARG 56 1.816 -16.764 1.931 1.00 0.00 C ATOM 423 NE ARG 56 3.226 -16.395 1.841 1.00 0.00 N ATOM 424 CZ ARG 56 4.210 -17.256 1.599 1.00 0.00 C ATOM 425 NH1 ARG 56 5.463 -16.828 1.535 1.00 0.00 H ATOM 426 NH2 ARG 56 3.938 -18.541 1.421 1.00 0.00 H ATOM 427 N LYS 57 -3.378 -15.726 1.429 1.00 0.00 N ATOM 428 CA LYS 57 -4.709 -16.227 1.222 1.00 0.00 C ATOM 429 C LYS 57 -5.008 -17.194 2.318 1.00 0.00 C ATOM 430 O LYS 57 -4.102 -17.729 2.956 1.00 0.00 O ATOM 431 CB LYS 57 -4.812 -16.931 -0.132 1.00 0.00 C ATOM 432 CG LYS 57 -4.034 -18.234 -0.216 1.00 0.00 C ATOM 433 CD LYS 57 -4.155 -18.862 -1.594 1.00 0.00 C ATOM 434 CE LYS 57 -3.399 -20.178 -1.670 1.00 0.00 C ATOM 435 NZ LYS 57 -3.502 -20.802 -3.019 1.00 0.00 N ATOM 436 N ASN 58 -6.310 -17.444 2.552 1.00 0.00 N ATOM 437 CA ASN 58 -6.712 -18.319 3.609 1.00 0.00 C ATOM 438 C ASN 58 -6.051 -19.619 3.339 1.00 0.00 C ATOM 439 O ASN 58 -5.482 -20.239 4.236 1.00 0.00 O ATOM 440 CB ASN 58 -8.233 -18.478 3.622 1.00 0.00 C ATOM 441 CG ASN 58 -8.946 -17.241 4.131 1.00 0.00 C ATOM 442 OD1 ASN 58 -8.347 -16.404 4.808 1.00 0.00 O ATOM 443 ND2 ASN 58 -10.227 -17.120 3.805 1.00 0.00 N ATOM 444 N GLY 59 -6.095 -20.060 2.074 1.00 0.00 N ATOM 445 CA GLY 59 -5.438 -21.287 1.771 1.00 0.00 C ATOM 446 C GLY 59 -6.127 -22.369 2.521 1.00 0.00 C ATOM 447 O GLY 59 -5.479 -23.265 3.060 1.00 0.00 O ATOM 448 N LEU 60 -7.469 -22.312 2.563 1.00 0.00 N ATOM 449 CA LEU 60 -8.191 -23.324 3.266 1.00 0.00 C ATOM 450 C LEU 60 -7.828 -24.582 2.550 1.00 0.00 C ATOM 451 O LEU 60 -7.597 -24.567 1.342 1.00 0.00 O ATOM 452 CB LEU 60 -9.695 -23.049 3.205 1.00 0.00 C ATOM 453 CG LEU 60 -10.184 -21.793 3.928 1.00 0.00 C ATOM 454 CD1 LEU 60 -11.668 -21.573 3.677 1.00 0.00 C ATOM 455 CD2 LEU 60 -9.968 -21.917 5.428 1.00 0.00 C ATOM 456 N ILE 61 -7.721 -25.707 3.279 1.00 0.00 N ATOM 457 CA ILE 61 -7.291 -26.902 2.619 1.00 0.00 C ATOM 458 C ILE 61 -8.282 -27.256 1.560 1.00 0.00 C ATOM 459 O ILE 61 -7.902 -27.584 0.436 1.00 0.00 O ATOM 460 CB ILE 61 -7.179 -28.081 3.603 1.00 0.00 C ATOM 461 CG1 ILE 61 -6.036 -27.843 4.592 1.00 0.00 C ATOM 462 CG2 ILE 61 -6.907 -29.377 2.854 1.00 0.00 C ATOM 463 CD1 ILE 61 -6.021 -28.815 5.753 1.00 0.00 C ATOM 464 N GLU 62 -9.587 -27.176 1.875 1.00 0.00 N ATOM 465 CA GLU 62 -10.570 -27.545 0.900 1.00 0.00 C ATOM 466 C GLU 62 -10.385 -26.649 -0.279 1.00 0.00 C ATOM 467 O GLU 62 -10.238 -27.110 -1.410 1.00 0.00 O ATOM 468 CB GLU 62 -11.979 -27.377 1.471 1.00 0.00 C ATOM 469 CG GLU 62 -13.088 -27.790 0.516 1.00 0.00 C ATOM 470 CD GLU 62 -14.468 -27.642 1.127 1.00 0.00 C ATOM 471 OE1 GLU 62 -14.555 -27.229 2.302 1.00 0.00 O ATOM 472 OE2 GLU 62 -15.461 -27.940 0.430 1.00 0.00 O ATOM 473 N ILE 63 -10.359 -25.326 -0.037 1.00 0.00 N ATOM 474 CA ILE 63 -10.153 -24.430 -1.134 1.00 0.00 C ATOM 475 C ILE 63 -9.214 -23.366 -0.685 1.00 0.00 C ATOM 476 O ILE 63 -9.290 -22.896 0.449 1.00 0.00 O ATOM 477 CB ILE 63 -11.474 -23.784 -1.590 1.00 0.00 C ATOM 478 CG1 ILE 63 -12.459 -24.856 -2.061 1.00 0.00 C ATOM 479 CG2 ILE 63 -11.227 -22.819 -2.739 1.00 0.00 C ATOM 480 CD1 ILE 63 -13.844 -24.327 -2.358 1.00 0.00 C ATOM 481 N TYR 64 -8.294 -22.955 -1.577 1.00 0.00 N ATOM 482 CA TYR 64 -7.395 -21.895 -1.244 1.00 0.00 C ATOM 483 C TYR 64 -7.849 -20.749 -2.077 1.00 0.00 C ATOM 484 O TYR 64 -8.142 -20.912 -3.260 1.00 0.00 O ATOM 485 CB TYR 64 -5.955 -22.291 -1.572 1.00 0.00 C ATOM 486 CG TYR 64 -5.415 -23.410 -0.710 1.00 0.00 C ATOM 487 CD1 TYR 64 -5.532 -24.736 -1.109 1.00 0.00 C ATOM 488 CD2 TYR 64 -4.790 -23.137 0.501 1.00 0.00 C ATOM 489 CE1 TYR 64 -5.042 -25.765 -0.327 1.00 0.00 C ATOM 490 CE2 TYR 64 -4.294 -24.153 1.295 1.00 0.00 C ATOM 491 CZ TYR 64 -4.426 -25.475 0.871 1.00 0.00 C ATOM 492 OH TYR 64 -3.937 -26.497 1.651 1.00 0.00 H ATOM 493 N ASN 65 -7.956 -19.553 -1.468 1.00 0.00 N ATOM 494 CA ASN 65 -8.496 -18.471 -2.231 1.00 0.00 C ATOM 495 C ASN 65 -7.629 -18.219 -3.413 1.00 0.00 C ATOM 496 O ASN 65 -8.107 -18.257 -4.545 1.00 0.00 O ATOM 497 CB ASN 65 -8.564 -17.200 -1.382 1.00 0.00 C ATOM 498 CG ASN 65 -9.662 -17.254 -0.338 1.00 0.00 C ATOM 499 OD1 ASN 65 -10.596 -18.048 -0.447 1.00 0.00 O ATOM 500 ND2 ASN 65 -9.552 -16.407 0.679 1.00 0.00 N ATOM 501 N GLU 66 -6.320 -17.990 -3.192 1.00 0.00 N ATOM 502 CA GLU 66 -5.505 -17.712 -4.335 1.00 0.00 C ATOM 503 C GLU 66 -4.169 -17.269 -3.845 1.00 0.00 C ATOM 504 O GLU 66 -3.861 -17.334 -2.658 1.00 0.00 O ATOM 505 CB GLU 66 -6.137 -16.610 -5.187 1.00 0.00 C ATOM 506 CG GLU 66 -6.352 -15.299 -4.448 1.00 0.00 C ATOM 507 CD GLU 66 -7.740 -15.192 -3.845 1.00 0.00 C ATOM 508 OE1 GLU 66 -8.155 -16.136 -3.139 1.00 0.00 O ATOM 509 OE2 GLU 66 -8.411 -14.165 -4.079 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 493 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 54.03 77.0 126 100.0 126 ARMSMC SECONDARY STRUCTURE . . 47.32 83.3 96 100.0 96 ARMSMC SURFACE . . . . . . . . 57.79 72.2 90 100.0 90 ARMSMC BURIED . . . . . . . . 43.23 88.9 36 100.0 36 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.51 70.6 51 100.0 51 ARMSSC1 RELIABLE SIDE CHAINS . 63.40 68.2 44 100.0 44 ARMSSC1 SECONDARY STRUCTURE . . 61.58 71.1 38 100.0 38 ARMSSC1 SURFACE . . . . . . . . 60.68 70.3 37 100.0 37 ARMSSC1 BURIED . . . . . . . . 63.65 71.4 14 100.0 14 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.65 50.0 40 100.0 40 ARMSSC2 RELIABLE SIDE CHAINS . 75.69 59.3 27 100.0 27 ARMSSC2 SECONDARY STRUCTURE . . 79.12 48.3 29 100.0 29 ARMSSC2 SURFACE . . . . . . . . 74.48 53.1 32 100.0 32 ARMSSC2 BURIED . . . . . . . . 89.23 37.5 8 100.0 8 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 75.35 31.2 16 100.0 16 ARMSSC3 RELIABLE SIDE CHAINS . 75.35 31.2 16 100.0 16 ARMSSC3 SECONDARY STRUCTURE . . 82.19 18.2 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 75.35 31.2 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.25 44.4 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 84.25 44.4 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 70.86 66.7 6 100.0 6 ARMSSC4 SURFACE . . . . . . . . 84.25 44.4 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 6.47 (Number of atoms: 64) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 6.47 64 100.0 64 CRMSCA CRN = ALL/NP . . . . . 0.1011 CRMSCA SECONDARY STRUCTURE . . 6.19 48 100.0 48 CRMSCA SURFACE . . . . . . . . 6.59 46 100.0 46 CRMSCA BURIED . . . . . . . . 6.16 18 100.0 18 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 6.57 315 100.0 315 CRMSMC SECONDARY STRUCTURE . . 6.31 237 100.0 237 CRMSMC SURFACE . . . . . . . . 6.72 225 100.0 225 CRMSMC BURIED . . . . . . . . 6.18 90 100.0 90 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.99 237 31.5 752 CRMSSC RELIABLE SIDE CHAINS . 8.30 195 27.5 710 CRMSSC SECONDARY STRUCTURE . . 7.33 181 31.2 580 CRMSSC SURFACE . . . . . . . . 8.21 177 32.6 543 CRMSSC BURIED . . . . . . . . 7.29 60 28.7 209 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 7.25 493 48.9 1008 CRMSALL SECONDARY STRUCTURE . . 6.79 373 48.3 772 CRMSALL SURFACE . . . . . . . . 7.45 361 49.7 727 CRMSALL BURIED . . . . . . . . 6.69 132 47.0 281 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.509 1.000 0.500 64 100.0 64 ERRCA SECONDARY STRUCTURE . . 4.299 1.000 0.500 48 100.0 48 ERRCA SURFACE . . . . . . . . 4.664 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 4.113 1.000 0.500 18 100.0 18 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.564 1.000 0.500 315 100.0 315 ERRMC SECONDARY STRUCTURE . . 4.363 1.000 0.500 237 100.0 237 ERRMC SURFACE . . . . . . . . 4.729 1.000 0.500 225 100.0 225 ERRMC BURIED . . . . . . . . 4.154 1.000 0.500 90 100.0 90 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.812 1.000 0.500 237 31.5 752 ERRSC RELIABLE SIDE CHAINS . 6.029 1.000 0.500 195 27.5 710 ERRSC SECONDARY STRUCTURE . . 5.322 1.000 0.500 181 31.2 580 ERRSC SURFACE . . . . . . . . 6.076 1.000 0.500 177 32.6 543 ERRSC BURIED . . . . . . . . 5.034 1.000 0.500 60 28.7 209 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 5.142 1.000 0.500 493 48.9 1008 ERRALL SECONDARY STRUCTURE . . 4.809 1.000 0.500 373 48.3 772 ERRALL SURFACE . . . . . . . . 5.364 1.000 0.500 361 49.7 727 ERRALL BURIED . . . . . . . . 4.535 1.000 0.500 132 47.0 281 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 21 38 51 56 64 64 DISTCA CA (P) 1.56 32.81 59.38 79.69 87.50 64 DISTCA CA (RMS) 0.89 1.59 2.09 2.56 3.47 DISTCA ALL (N) 11 137 251 358 410 493 1008 DISTALL ALL (P) 1.09 13.59 24.90 35.52 40.67 1008 DISTALL ALL (RMS) 0.79 1.54 2.04 2.68 3.63 DISTALL END of the results output