####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 67 ( 268), selected 67 , name T0559TS328_1-D1 # Molecule2: number of CA atoms 67 ( 1078), selected 67 , name T0559-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0559TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 30 - 65 4.94 11.50 LCS_AVERAGE: 45.71 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 40 - 56 1.76 12.53 LCS_AVERAGE: 16.17 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 41 - 53 0.97 12.66 LCS_AVERAGE: 10.02 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 67 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 3 M 3 3 5 13 0 3 3 4 4 5 6 8 9 10 17 17 19 23 26 28 29 31 34 37 LCS_GDT L 4 L 4 3 5 14 3 3 3 4 4 6 7 8 10 12 17 17 19 23 26 28 29 31 34 37 LCS_GDT K 5 K 5 3 5 14 3 3 3 4 4 5 6 8 10 13 17 17 19 23 26 28 30 32 34 37 LCS_GDT E 6 E 6 3 5 20 3 3 3 4 4 6 7 10 11 13 17 19 21 24 28 29 30 32 34 37 LCS_GDT K 7 K 7 3 5 20 3 3 3 4 4 5 9 10 13 14 16 19 21 24 28 29 30 32 34 36 LCS_GDT A 8 A 8 3 4 24 3 3 3 4 6 9 10 12 14 14 17 19 22 25 28 29 31 32 34 37 LCS_GDT G 9 G 9 3 4 24 0 3 3 5 6 9 11 13 16 17 19 22 24 26 28 29 30 33 34 37 LCS_GDT A 10 A 10 3 10 24 1 3 3 5 7 11 13 16 18 21 23 23 25 26 28 31 35 36 36 37 LCS_GDT L 11 L 11 10 12 24 8 9 9 10 11 12 15 16 19 21 23 23 25 26 29 32 35 36 36 40 LCS_GDT A 12 A 12 10 12 24 8 9 9 10 11 12 15 16 19 21 23 26 29 30 32 36 39 40 42 43 LCS_GDT G 13 G 13 10 12 25 8 9 9 10 11 12 15 16 21 24 26 28 30 32 34 36 39 40 42 43 LCS_GDT Q 14 Q 14 10 12 25 8 9 9 14 16 19 20 21 23 25 27 31 32 34 36 38 39 41 43 45 LCS_GDT I 15 I 15 10 12 25 8 13 14 16 17 19 20 23 27 29 31 34 36 38 39 41 42 43 45 48 LCS_GDT W 16 W 16 10 12 25 8 9 9 10 12 15 19 22 26 28 32 34 36 38 39 41 42 43 45 48 LCS_GDT E 17 E 17 10 12 25 8 9 14 15 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT A 18 A 18 10 12 25 8 9 9 10 11 12 20 23 27 29 31 34 36 38 39 41 42 43 45 48 LCS_GDT L 19 L 19 10 12 25 8 9 9 10 11 13 16 22 27 28 32 34 36 38 39 41 42 43 45 48 LCS_GDT N 20 N 20 10 12 25 3 4 9 10 12 14 18 22 27 28 32 34 36 38 39 41 42 43 45 48 LCS_GDT G 21 G 21 4 12 25 3 4 6 8 11 12 15 16 19 21 23 28 32 33 35 38 42 43 45 48 LCS_GDT T 22 T 22 4 12 25 3 4 6 7 10 12 15 16 19 21 23 23 26 30 32 35 40 42 44 48 LCS_GDT E 23 E 23 3 8 25 3 4 4 7 8 12 15 16 19 21 23 23 26 28 30 34 38 41 44 46 LCS_GDT G 24 G 24 3 8 25 3 3 6 7 10 12 15 16 19 21 23 23 25 27 29 30 33 34 39 40 LCS_GDT L 25 L 25 3 8 25 3 3 6 7 10 12 15 16 19 21 23 23 25 27 30 34 38 42 44 48 LCS_GDT T 26 T 26 5 9 25 4 5 5 7 9 10 11 12 14 18 19 22 26 30 32 36 40 43 45 48 LCS_GDT Q 27 Q 27 5 9 25 4 5 5 7 9 10 10 13 16 21 23 24 28 31 33 38 40 43 45 48 LCS_GDT K 28 K 28 5 9 25 4 5 5 7 9 10 11 16 19 21 23 26 32 35 37 38 40 43 45 48 LCS_GDT Q 29 Q 29 5 9 32 4 5 5 8 11 11 13 16 19 22 26 29 33 35 37 41 42 43 45 48 LCS_GDT I 30 I 30 5 9 36 4 5 5 8 12 17 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT K 31 K 31 5 9 36 3 4 5 11 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT K 32 K 32 5 9 36 3 4 5 9 12 17 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT A 33 A 33 5 9 36 3 4 5 6 9 10 11 12 13 15 18 24 32 38 39 41 42 43 45 48 LCS_GDT T 34 T 34 4 9 36 0 3 5 6 9 10 10 12 15 21 24 28 31 33 34 38 40 42 43 45 LCS_GDT K 35 K 35 4 5 36 2 3 4 6 9 12 18 21 23 25 27 29 31 33 35 38 40 42 43 45 LCS_GDT L 36 L 36 4 5 36 3 7 14 16 17 19 20 22 23 27 29 33 35 38 39 41 42 43 45 48 LCS_GDT K 37 K 37 4 5 36 3 3 4 5 17 18 20 22 23 27 29 33 36 38 39 41 42 43 45 48 LCS_GDT A 38 A 38 4 5 36 3 3 4 14 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT D 39 D 39 3 15 36 3 3 4 5 9 17 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT K 40 K 40 3 17 36 3 12 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT D 41 D 41 13 17 36 3 3 4 13 17 19 19 22 23 27 29 34 36 38 39 41 42 43 45 48 LCS_GDT F 42 F 42 13 17 36 8 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT F 43 F 43 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT L 44 L 44 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT G 45 G 45 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT L 46 L 46 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT G 47 G 47 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT W 48 W 48 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT L 49 L 49 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT L 50 L 50 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT R 51 R 51 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT E 52 E 52 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT D 53 D 53 13 17 36 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT K 54 K 54 5 17 36 4 4 7 9 16 19 20 24 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT V 55 V 55 5 17 36 4 5 14 16 17 19 21 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT V 56 V 56 5 17 36 4 4 8 14 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT T 57 T 57 5 16 36 4 4 7 14 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT S 58 S 58 5 9 36 3 4 5 9 11 14 21 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT E 59 E 59 4 9 36 3 4 5 9 12 14 21 24 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT V 60 V 60 4 9 36 3 4 7 9 11 13 18 22 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT E 61 E 61 4 9 36 3 4 7 9 11 13 17 20 24 26 30 32 34 35 39 41 42 43 45 48 LCS_GDT G 62 G 62 4 9 36 3 4 7 9 12 15 22 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT E 63 E 63 4 7 36 3 5 6 7 10 13 20 25 27 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT I 64 I 64 4 7 36 3 3 5 7 10 12 13 17 25 29 32 34 36 38 39 41 42 43 45 48 LCS_GDT F 65 F 65 5 7 36 4 5 6 7 10 12 13 21 25 28 29 33 35 36 39 41 42 43 45 48 LCS_GDT V 66 V 66 5 7 32 4 5 6 6 10 12 16 18 21 26 29 32 35 36 39 41 42 43 45 48 LCS_GDT K 67 K 67 5 7 32 4 5 6 6 9 14 16 18 21 24 26 28 31 32 34 37 39 41 43 45 LCS_GDT L 68 L 68 5 7 31 4 5 6 6 10 12 13 13 14 16 19 23 26 28 31 36 36 38 39 41 LCS_GDT V 69 V 69 5 7 28 3 4 6 7 9 12 13 13 14 21 23 26 31 32 34 37 37 40 41 42 LCS_AVERAGE LCS_A: 23.97 ( 10.02 16.17 45.71 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 13 14 16 17 19 22 25 27 29 32 34 36 38 39 41 42 43 45 48 GDT PERCENT_AT 16.42 19.40 20.90 23.88 25.37 28.36 32.84 37.31 40.30 43.28 47.76 50.75 53.73 56.72 58.21 61.19 62.69 64.18 67.16 71.64 GDT RMS_LOCAL 0.33 0.45 0.55 0.90 1.16 1.61 2.43 2.69 2.92 3.11 3.59 3.79 4.00 4.32 4.45 4.70 4.86 5.16 5.51 6.07 GDT RMS_ALL_AT 12.46 12.47 12.45 12.61 12.39 11.89 11.50 11.49 11.50 11.49 11.52 11.51 11.48 11.47 11.46 11.43 11.41 11.47 11.53 11.65 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 3 M 3 28.036 4 0.632 0.632 28.036 0.000 0.000 LGA L 4 L 4 24.803 4 0.380 0.380 25.967 0.000 0.000 LGA K 5 K 5 23.730 5 0.215 0.215 24.516 0.000 0.000 LGA E 6 E 6 25.671 5 0.640 0.640 25.671 0.000 0.000 LGA K 7 K 7 24.657 5 0.246 0.246 25.564 0.000 0.000 LGA A 8 A 8 21.023 1 0.546 0.546 22.645 0.000 0.000 LGA G 9 G 9 20.354 0 0.413 0.413 21.138 0.000 0.000 LGA A 10 A 10 19.385 1 0.598 0.598 20.024 0.000 0.000 LGA L 11 L 11 15.980 4 0.561 0.561 17.422 0.000 0.000 LGA A 12 A 12 12.803 1 0.013 0.013 14.222 0.119 0.095 LGA G 13 G 13 13.113 0 0.056 0.056 13.654 0.357 0.357 LGA Q 14 Q 14 10.432 5 0.031 0.031 11.460 5.119 2.275 LGA I 15 I 15 4.860 4 0.035 0.035 7.291 47.262 23.631 LGA W 16 W 16 4.990 10 0.028 0.028 4.990 37.381 10.680 LGA E 17 E 17 2.677 5 0.113 0.113 3.670 57.619 25.608 LGA A 18 A 18 5.158 1 0.133 0.133 8.192 27.381 21.905 LGA L 19 L 19 7.149 4 0.110 0.110 10.652 10.238 5.119 LGA N 20 N 20 8.011 4 0.575 0.575 10.710 3.690 1.845 LGA G 21 G 21 14.844 0 0.218 0.218 18.481 0.000 0.000 LGA T 22 T 22 17.226 3 0.593 0.593 17.226 0.000 0.000 LGA E 23 E 23 19.049 5 0.214 0.214 19.436 0.000 0.000 LGA G 24 G 24 19.191 0 0.559 0.559 19.191 0.000 0.000 LGA L 25 L 25 14.555 4 0.661 0.661 16.045 0.000 0.000 LGA T 26 T 26 11.797 3 0.651 0.651 12.949 1.190 0.680 LGA Q 27 Q 27 10.650 5 0.110 0.110 11.529 2.857 1.270 LGA K 28 K 28 10.768 5 0.050 0.050 11.155 1.548 0.688 LGA Q 29 Q 29 9.820 5 0.137 0.137 9.990 3.214 1.429 LGA I 30 I 30 3.479 4 0.416 0.416 5.612 56.429 28.214 LGA K 31 K 31 2.039 5 0.041 0.041 2.596 69.048 30.688 LGA K 32 K 32 3.612 5 0.021 0.021 5.260 38.214 16.984 LGA A 33 A 33 9.294 1 0.654 0.654 9.962 3.929 3.143 LGA T 34 T 34 11.700 3 0.631 0.631 14.496 0.000 0.000 LGA K 35 K 35 12.212 5 0.623 0.623 12.486 0.000 0.000 LGA L 36 L 36 8.036 4 0.295 0.295 9.404 5.833 2.917 LGA K 37 K 37 7.902 5 0.553 0.553 8.096 20.357 9.048 LGA A 38 A 38 3.079 1 0.294 0.294 4.798 54.762 43.810 LGA D 39 D 39 3.219 4 0.526 0.526 3.219 63.214 31.607 LGA K 40 K 40 3.227 5 0.457 0.457 5.472 45.119 20.053 LGA D 41 D 41 7.316 4 0.330 0.330 7.748 15.119 7.560 LGA F 42 F 42 2.786 7 0.226 0.226 3.807 57.500 20.909 LGA F 43 F 43 1.994 7 0.030 0.030 2.349 72.976 26.537 LGA L 44 L 44 1.908 4 0.047 0.047 1.995 72.857 36.429 LGA G 45 G 45 2.486 0 0.047 0.047 2.486 68.810 68.810 LGA L 46 L 46 1.708 4 0.030 0.030 1.849 77.143 38.571 LGA G 47 G 47 0.568 0 0.021 0.021 1.258 88.214 88.214 LGA W 48 W 48 1.120 10 0.094 0.094 1.120 90.595 25.884 LGA L 49 L 49 0.508 4 0.069 0.069 1.353 90.595 45.298 LGA L 50 L 50 1.642 4 0.020 0.020 2.404 72.976 36.488 LGA R 51 R 51 2.072 7 0.029 0.029 3.051 63.095 22.944 LGA E 52 E 52 2.065 5 0.098 0.098 2.682 64.881 28.836 LGA D 53 D 53 2.775 4 0.776 0.776 4.638 52.619 26.310 LGA K 54 K 54 5.482 5 0.662 0.662 5.482 33.095 14.709 LGA V 55 V 55 3.753 3 0.126 0.126 4.318 48.690 27.823 LGA V 56 V 56 2.233 3 0.279 0.279 4.604 52.619 30.068 LGA T 57 T 57 1.364 3 0.050 0.050 3.082 71.429 40.816 LGA S 58 S 58 4.355 2 0.165 0.165 4.355 52.619 35.079 LGA E 59 E 59 5.353 5 0.025 0.025 8.304 17.381 7.725 LGA V 60 V 60 6.601 3 0.692 0.692 6.685 17.500 10.000 LGA E 61 E 61 7.884 5 0.260 0.260 7.884 14.405 6.402 LGA G 62 G 62 3.607 0 0.196 0.196 5.331 55.952 55.952 LGA E 63 E 63 4.064 5 0.468 0.468 5.252 39.881 17.725 LGA I 64 I 64 5.687 4 0.512 0.512 6.819 21.905 10.952 LGA F 65 F 65 7.195 7 0.124 0.124 7.195 15.476 5.628 LGA V 66 V 66 7.967 3 0.350 0.350 8.860 4.881 2.789 LGA K 67 K 67 11.331 5 0.040 0.040 12.636 0.000 0.000 LGA L 68 L 68 13.901 4 0.113 0.113 13.901 0.000 0.000 LGA V 69 V 69 13.958 3 0.173 0.173 18.148 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 67 268 268 100.00 523 268 51.24 67 SUMMARY(RMSD_GDC): 10.690 10.518 10.518 28.181 15.231 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 67 67 4.0 25 2.69 35.448 30.739 0.895 LGA_LOCAL RMSD: 2.694 Number of atoms: 25 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.488 Number of assigned atoms: 67 Std_ASGN_ATOMS RMSD: 10.690 Standard rmsd on all 67 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.714250 * X + 0.625796 * Y + 0.313411 * Z + -73.200630 Y_new = 0.081734 * X + 0.370155 * Y + -0.925367 * Z + -29.791779 Z_new = -0.695102 * X + 0.686560 * Y + 0.213234 * Z + 13.492581 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.113938 0.768562 1.269658 [DEG: 6.5282 44.0354 72.7461 ] ZXZ: 0.326562 1.355912 -0.791581 [DEG: 18.7106 77.6880 -45.3542 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0559TS328_1-D1 REMARK 2: T0559-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0559TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 67 67 4.0 25 2.69 30.739 10.69 REMARK ---------------------------------------------------------- MOLECULE T0559TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0559 REMARK MODEL 1 REMARK PARENT 1l2l_A ATOM 9 N MET 3 16.079 -11.176 6.552 1.00 3.00 N ATOM 10 CA MET 3 16.259 -12.526 6.047 1.00 3.00 C ATOM 11 C MET 3 15.193 -12.803 4.983 1.00 3.00 C ATOM 12 O MET 3 15.369 -13.665 4.121 1.00 3.00 O ATOM 13 N LEU 4 14.092 -12.059 5.050 1.00 3.00 N ATOM 14 CA LEU 4 12.981 -12.214 4.100 1.00 3.00 C ATOM 15 C LEU 4 12.589 -12.782 2.746 1.00 3.00 C ATOM 16 O LEU 4 12.128 -12.055 1.877 1.00 3.00 O ATOM 17 N LYS 5 12.842 -14.101 2.572 1.00 3.00 N ATOM 18 CA LYS 5 12.564 -14.765 1.321 1.00 3.00 C ATOM 19 C LYS 5 11.177 -15.417 1.315 1.00 3.00 C ATOM 20 O LYS 5 10.838 -15.997 0.253 1.00 3.00 O ATOM 21 N GLU 6 10.453 -15.339 2.438 1.00 3.00 N ATOM 22 CA GLU 6 9.146 -15.995 2.453 1.00 3.00 C ATOM 23 C GLU 6 8.112 -15.085 1.803 1.00 3.00 C ATOM 24 O GLU 6 8.130 -13.861 2.103 1.00 3.00 O ATOM 25 N LYS 7 7.218 -15.616 0.975 1.00 3.00 N ATOM 26 CA LYS 7 6.292 -14.805 0.153 1.00 3.00 C ATOM 27 C LYS 7 4.881 -14.728 0.709 1.00 3.00 C ATOM 28 O LYS 7 4.094 -13.956 0.178 1.00 3.00 O ATOM 29 N ALA 8 4.590 -15.487 1.759 1.00 3.00 N ATOM 30 CA ALA 8 3.350 -15.395 2.493 1.00 3.00 C ATOM 31 C ALA 8 3.514 -14.899 3.889 1.00 3.00 C ATOM 32 O ALA 8 4.422 -14.101 4.197 1.00 3.00 O ATOM 33 N GLY 9 2.610 -15.331 4.765 1.00 3.00 N ATOM 34 CA GLY 9 2.587 -14.829 6.146 1.00 3.00 C ATOM 35 C GLY 9 2.575 -14.224 7.540 1.00 3.00 C ATOM 36 O GLY 9 3.522 -14.433 8.311 1.00 3.00 O ATOM 37 N ALA 10 1.531 -13.466 7.869 1.00 3.00 N ATOM 38 CA ALA 10 1.425 -12.848 9.192 1.00 3.00 C ATOM 39 C ALA 10 0.064 -12.207 9.480 1.00 3.00 C ATOM 40 O ALA 10 -0.691 -11.870 8.558 1.00 3.00 O ATOM 41 N LEU 11 -0.255 -12.058 10.764 1.00 3.00 N ATOM 42 CA LEU 11 -1.519 -11.446 11.168 1.00 3.00 C ATOM 43 C LEU 11 -1.278 -9.985 11.537 1.00 3.00 C ATOM 44 O LEU 11 -0.198 -9.460 11.283 1.00 3.00 O ATOM 45 N ALA 12 -2.273 -9.327 12.134 1.00 3.00 N ATOM 46 CA ALA 12 -2.130 -7.915 12.503 1.00 3.00 C ATOM 47 C ALA 12 -1.069 -7.665 13.562 1.00 3.00 C ATOM 48 O ALA 12 -0.322 -6.697 13.473 1.00 3.00 O ATOM 49 N GLY 13 -1.023 -8.529 14.571 1.00 3.00 N ATOM 50 CA GLY 13 -0.057 -8.408 15.663 1.00 3.00 C ATOM 51 C GLY 13 1.385 -8.564 15.180 1.00 3.00 C ATOM 52 O GLY 13 2.263 -7.775 15.539 1.00 3.00 O ATOM 53 N GLN 14 1.618 -9.583 14.361 1.00 3.00 N ATOM 54 CA GLN 14 2.948 -9.856 13.830 1.00 3.00 C ATOM 55 C GLN 14 3.390 -8.768 12.859 1.00 3.00 C ATOM 56 O GLN 14 4.571 -8.417 12.811 1.00 3.00 O ATOM 57 N ILE 15 2.443 -8.223 12.099 1.00 3.00 N ATOM 58 CA ILE 15 2.761 -7.161 11.145 1.00 3.00 C ATOM 59 C ILE 15 3.128 -5.905 11.933 1.00 3.00 C ATOM 60 O ILE 15 4.116 -5.234 11.624 1.00 3.00 O ATOM 61 N TRP 16 2.327 -5.583 12.945 1.00 3.00 N ATOM 62 CA TRP 16 2.591 -4.398 13.763 1.00 3.00 C ATOM 63 C TRP 16 3.963 -4.534 14.406 1.00 3.00 C ATOM 64 O TRP 16 4.747 -3.589 14.432 1.00 3.00 O ATOM 65 N GLU 17 4.253 -5.724 14.919 1.00 3.00 N ATOM 66 CA GLU 17 5.537 -5.988 15.555 1.00 3.00 C ATOM 67 C GLU 17 6.687 -5.723 14.584 1.00 3.00 C ATOM 68 O GLU 17 7.666 -5.063 14.936 1.00 3.00 O ATOM 69 N ALA 18 6.555 -6.235 13.361 1.00 3.00 N ATOM 70 CA ALA 18 7.582 -6.063 12.335 1.00 3.00 C ATOM 71 C ALA 18 8.186 -4.777 11.782 1.00 3.00 C ATOM 72 O ALA 18 9.379 -4.712 11.377 1.00 3.00 O ATOM 73 N LEU 19 7.528 -3.675 11.857 1.00 3.00 N ATOM 74 CA LEU 19 7.633 -2.319 11.481 1.00 3.00 C ATOM 75 C LEU 19 8.387 -1.375 12.367 1.00 3.00 C ATOM 76 O LEU 19 8.473 -0.162 11.958 1.00 3.00 O ATOM 77 N ASN 20 8.944 -1.712 13.474 1.00 3.00 N ATOM 78 CA ASN 20 9.718 -0.966 14.462 1.00 3.00 C ATOM 79 C ASN 20 10.094 0.463 14.128 1.00 3.00 C ATOM 80 O ASN 20 9.712 1.432 14.844 1.00 3.00 O ATOM 81 N GLY 21 10.769 0.698 13.037 1.00 3.00 N ATOM 82 CA GLY 21 11.130 2.008 12.487 1.00 3.00 C ATOM 83 C GLY 21 9.917 2.912 12.321 1.00 3.00 C ATOM 84 O GLY 21 10.024 4.119 12.683 1.00 3.00 O ATOM 85 N THR 22 8.805 2.435 11.844 1.00 3.00 N ATOM 86 CA THR 22 7.530 3.109 11.614 1.00 3.00 C ATOM 87 C THR 22 6.481 3.039 12.722 1.00 3.00 C ATOM 88 O THR 22 5.222 2.978 12.547 1.00 3.00 O ATOM 89 N GLU 23 6.919 3.130 13.984 1.00 3.00 N ATOM 90 CA GLU 23 6.093 3.204 15.165 1.00 3.00 C ATOM 91 C GLU 23 4.669 3.715 14.954 1.00 3.00 C ATOM 92 O GLU 23 3.718 3.172 15.519 1.00 3.00 O ATOM 93 N GLY 24 4.526 4.756 14.139 1.00 3.00 N ATOM 94 CA GLY 24 3.214 5.327 13.862 1.00 3.00 C ATOM 95 C GLY 24 2.293 4.290 13.218 1.00 3.00 C ATOM 96 O GLY 24 1.190 4.043 13.704 1.00 3.00 O ATOM 97 N LEU 25 2.753 3.682 12.127 1.00 3.00 N ATOM 98 CA LEU 25 1.967 2.668 11.432 1.00 3.00 C ATOM 99 C LEU 25 1.576 1.218 11.733 1.00 3.00 C ATOM 100 O LEU 25 0.437 0.805 11.486 1.00 3.00 O ATOM 101 N THR 26 2.494 0.461 12.296 1.00 3.00 N ATOM 102 CA THR 26 2.166 -0.912 12.645 1.00 3.00 C ATOM 103 C THR 26 1.069 -0.935 13.669 1.00 3.00 C ATOM 104 O THR 26 0.348 -1.910 13.797 1.00 3.00 O ATOM 105 N GLN 27 0.956 0.145 14.431 1.00 3.00 N ATOM 106 CA GLN 27 -0.049 0.236 15.483 1.00 3.00 C ATOM 107 C GLN 27 -1.265 0.962 15.015 1.00 3.00 C ATOM 108 O GLN 27 -2.328 0.425 15.036 1.00 3.00 O ATOM 109 N LYS 28 -1.087 2.211 14.616 1.00 9.00 N ATOM 110 CA LYS 28 -2.208 3.008 14.153 1.00 9.00 C ATOM 111 C LYS 28 -2.860 2.272 12.979 1.00 9.00 C ATOM 112 O LYS 28 -4.089 2.237 12.855 1.00 9.00 O ATOM 113 N GLN 29 -2.059 1.623 12.141 1.00 3.00 N ATOM 114 CA GLN 29 -2.664 0.988 11.000 1.00 3.00 C ATOM 115 C GLN 29 -3.021 -0.481 10.935 1.00 3.00 C ATOM 116 O GLN 29 -3.732 -0.888 10.017 1.00 3.00 O ATOM 117 N ILE 30 -2.532 -1.288 11.858 1.00 3.00 N ATOM 118 CA ILE 30 -2.849 -2.697 11.810 1.00 3.00 C ATOM 119 C ILE 30 -3.026 -3.271 13.199 1.00 3.00 C ATOM 120 O ILE 30 -2.771 -4.465 13.408 1.00 3.00 O ATOM 121 N LYS 31 -3.455 -2.408 14.132 1.00 3.00 N ATOM 122 CA LYS 31 -3.651 -2.827 15.511 1.00 3.00 C ATOM 123 C LYS 31 -4.671 -2.011 16.301 1.00 3.00 C ATOM 124 O LYS 31 -5.364 -2.543 17.164 1.00 3.00 O ATOM 125 N LYS 32 -4.757 -0.718 16.005 1.00 3.00 N ATOM 126 CA LYS 32 -5.692 0.162 16.700 1.00 3.00 C ATOM 127 C LYS 32 -7.153 -0.193 16.441 1.00 3.00 C ATOM 128 O LYS 32 -7.917 -0.436 17.377 1.00 3.00 O ATOM 129 N ALA 33 -7.533 -0.219 15.167 1.00 3.00 N ATOM 130 CA ALA 33 -8.906 -0.515 14.777 1.00 3.00 C ATOM 131 C ALA 33 -9.181 -2.006 14.634 1.00 3.00 C ATOM 132 O ALA 33 -8.262 -2.813 14.504 1.00 3.00 O ATOM 133 N THR 34 -10.461 -2.359 14.660 1.00 3.00 N ATOM 134 CA THR 34 -10.888 -3.744 14.522 1.00 3.00 C ATOM 135 C THR 34 -12.162 -3.773 13.683 1.00 3.00 C ATOM 136 O THR 34 -13.179 -3.197 14.067 1.00 3.00 O ATOM 137 N LYS 35 -12.124 -4.450 12.524 1.00 3.00 N ATOM 138 CA LYS 35 -10.974 -5.176 11.970 1.00 3.00 C ATOM 139 C LYS 35 -9.761 -4.290 11.675 1.00 3.00 C ATOM 140 O LYS 35 -9.882 -3.072 11.563 1.00 3.00 O ATOM 141 N LEU 36 -8.597 -4.918 11.550 1.00 3.00 N ATOM 142 CA LEU 36 -7.359 -4.207 11.273 1.00 3.00 C ATOM 143 C LEU 36 -7.519 -3.363 10.059 1.00 3.00 C ATOM 144 O LEU 36 -6.750 -3.492 9.121 1.00 3.00 O ATOM 145 N LYS 37 -8.553 -2.520 10.113 1.00 3.00 N ATOM 146 CA LYS 37 -8.878 -1.551 9.080 1.00 3.00 C ATOM 147 C LYS 37 -8.134 -0.331 9.447 1.00 3.00 C ATOM 148 O LYS 37 -8.648 0.559 10.113 1.00 3.00 O ATOM 149 N ALA 38 -6.880 -0.363 9.147 1.00 3.00 N ATOM 150 CA ALA 38 -6.087 0.740 9.514 1.00 3.00 C ATOM 151 C ALA 38 -5.622 1.440 8.284 1.00 3.00 C ATOM 152 O ALA 38 -6.399 1.828 7.414 1.00 3.00 O ATOM 153 N ASP 39 -4.324 1.581 8.242 1.00 9.00 N ATOM 154 CA ASP 39 -3.666 2.191 7.142 1.00 9.00 C ATOM 155 C ASP 39 -3.820 1.254 6.008 1.00 9.00 C ATOM 156 O ASP 39 -2.936 0.443 5.705 1.00 9.00 O ATOM 157 N LYS 40 -4.986 1.317 5.435 1.00 3.00 N ATOM 158 CA LYS 40 -5.272 0.409 4.416 1.00 3.00 C ATOM 159 C LYS 40 -5.116 -0.988 4.972 1.00 3.00 C ATOM 160 O LYS 40 -4.422 -1.845 4.420 1.00 3.00 O ATOM 161 N ASP 41 -5.772 -1.199 6.095 1.00 3.00 N ATOM 162 CA ASP 41 -5.788 -2.483 6.712 1.00 3.00 C ATOM 163 C ASP 41 -4.413 -3.087 6.746 1.00 3.00 C ATOM 164 O ASP 41 -4.262 -4.303 6.607 1.00 3.00 O ATOM 165 N PHE 42 -3.387 -2.267 6.876 1.00 3.00 N ATOM 166 CA PHE 42 -2.058 -2.850 6.840 1.00 3.00 C ATOM 167 C PHE 42 -1.302 -2.843 5.520 1.00 3.00 C ATOM 168 O PHE 42 -0.150 -3.284 5.444 1.00 3.00 O ATOM 169 N PHE 43 -1.952 -2.342 4.477 1.00 3.00 N ATOM 170 CA PHE 43 -1.325 -2.294 3.165 1.00 3.00 C ATOM 171 C PHE 43 -0.079 -1.414 3.173 1.00 3.00 C ATOM 172 O PHE 43 0.940 -1.781 2.597 1.00 3.00 O ATOM 173 N LEU 44 -0.145 -0.265 3.838 1.00 3.00 N ATOM 174 CA LEU 44 1.019 0.618 3.905 1.00 3.00 C ATOM 175 C LEU 44 2.139 -0.129 4.621 1.00 3.00 C ATOM 176 O LEU 44 3.304 -0.055 4.226 1.00 3.00 O ATOM 177 N GLY 45 1.777 -0.867 5.663 1.00 3.00 N ATOM 178 CA GLY 45 2.770 -1.634 6.391 1.00 3.00 C ATOM 179 C GLY 45 3.360 -2.706 5.491 1.00 3.00 C ATOM 180 O GLY 45 4.560 -2.971 5.531 1.00 3.00 O ATOM 181 N LEU 46 2.514 -3.320 4.672 1.00 3.00 N ATOM 182 CA LEU 46 2.960 -4.365 3.760 1.00 3.00 C ATOM 183 C LEU 46 3.884 -3.788 2.700 1.00 3.00 C ATOM 184 O LEU 46 4.882 -4.408 2.334 1.00 3.00 O ATOM 185 N GLY 47 3.553 -2.596 2.217 1.00 3.00 N ATOM 186 CA GLY 47 4.369 -1.947 1.197 1.00 3.00 C ATOM 187 C GLY 47 5.743 -1.579 1.739 1.00 3.00 C ATOM 188 O GLY 47 6.729 -1.572 1.005 1.00 3.00 O ATOM 189 N TRP 48 5.811 -1.269 3.027 1.00 3.00 N ATOM 190 CA TRP 48 7.087 -0.922 3.626 1.00 3.00 C ATOM 191 C TRP 48 7.926 -2.198 3.678 1.00 3.00 C ATOM 192 O TRP 48 9.128 -2.177 3.424 1.00 3.00 O ATOM 193 N LEU 49 7.267 -3.312 3.988 1.00 3.00 N ATOM 194 CA LEU 49 7.929 -4.602 4.076 1.00 3.00 C ATOM 195 C LEU 49 8.520 -5.018 2.727 1.00 3.00 C ATOM 196 O LEU 49 9.672 -5.450 2.653 1.00 3.00 O ATOM 197 N LEU 50 7.740 -4.891 1.657 1.00 3.00 N ATOM 198 CA LEU 50 8.240 -5.265 0.340 1.00 3.00 C ATOM 199 C LEU 50 9.389 -4.344 -0.080 1.00 3.00 C ATOM 200 O LEU 50 10.351 -4.787 -0.704 1.00 3.00 O ATOM 201 N ARG 51 9.290 -3.067 0.281 1.00 3.00 N ATOM 202 CA ARG 51 10.316 -2.089 -0.073 1.00 3.00 C ATOM 203 C ARG 51 11.681 -2.430 0.515 1.00 3.00 C ATOM 204 O ARG 51 12.716 -2.191 -0.111 1.00 3.00 O ATOM 205 N GLU 52 11.685 -3.000 1.714 1.00 3.00 N ATOM 206 CA GLU 52 12.936 -3.341 2.371 1.00 3.00 C ATOM 207 C GLU 52 13.446 -4.753 2.097 1.00 3.00 C ATOM 208 O GLU 52 14.631 -5.028 2.288 1.00 3.00 O ATOM 209 N ASP 53 12.570 -5.642 1.632 1.00 3.00 N ATOM 210 CA ASP 53 12.960 -7.027 1.397 1.00 3.00 C ATOM 211 C ASP 53 11.528 -7.358 1.037 1.00 3.00 C ATOM 212 O ASP 53 10.641 -6.496 1.090 1.00 3.00 O ATOM 213 N LYS 54 11.398 -8.648 0.672 1.00 3.00 N ATOM 214 CA LYS 54 10.147 -9.255 0.199 1.00 3.00 C ATOM 215 C LYS 54 9.151 -9.396 1.327 1.00 3.00 C ATOM 216 O LYS 54 9.485 -9.281 2.517 1.00 3.00 O ATOM 217 N VAL 55 7.941 -9.653 0.897 1.00 3.00 N ATOM 218 CA VAL 55 6.798 -9.620 1.767 1.00 3.00 C ATOM 219 C VAL 55 5.834 -10.851 1.507 1.00 3.00 C ATOM 220 O VAL 55 6.244 -11.878 0.938 1.00 3.00 O ATOM 221 N VAL 56 4.572 -10.712 1.961 1.00 3.00 N ATOM 222 CA VAL 56 3.463 -11.722 1.767 1.00 3.00 C ATOM 223 C VAL 56 2.159 -10.986 1.568 1.00 3.00 C ATOM 224 O VAL 56 2.161 -9.881 0.980 1.00 3.00 O ATOM 225 N THR 57 1.163 -11.673 2.087 1.00 3.00 N ATOM 226 CA THR 57 -0.218 -11.235 2.186 1.00 3.00 C ATOM 227 C THR 57 -0.791 -11.787 3.452 1.00 3.00 C ATOM 228 O THR 57 -0.753 -12.995 3.698 1.00 3.00 O ATOM 229 N SER 58 -1.286 -10.867 4.188 1.00 3.00 N ATOM 230 CA SER 58 -1.813 -11.141 5.468 1.00 3.00 C ATOM 231 C SER 58 -3.164 -11.748 5.865 1.00 3.00 C ATOM 232 O SER 58 -4.091 -11.796 5.054 1.00 3.00 O ATOM 233 N GLU 59 -3.271 -12.212 7.107 1.00 3.00 N ATOM 234 CA GLU 59 -4.509 -12.811 7.584 1.00 3.00 C ATOM 235 C GLU 59 -4.897 -12.331 8.985 1.00 3.00 C ATOM 236 O GLU 59 -4.056 -12.231 9.880 1.00 3.00 O ATOM 237 N VAL 60 -6.181 -12.022 9.149 1.00 3.00 N ATOM 238 CA VAL 60 -6.734 -11.551 10.409 1.00 3.00 C ATOM 239 C VAL 60 -8.028 -10.846 10.775 1.00 3.00 C ATOM 240 O VAL 60 -8.536 -10.986 11.892 1.00 3.00 O ATOM 241 N GLU 61 -8.528 -10.068 9.829 1.00 3.00 N ATOM 242 CA GLU 61 -9.760 -9.323 10.023 1.00 3.00 C ATOM 243 C GLU 61 -10.631 -9.344 8.784 1.00 3.00 C ATOM 244 O GLU 61 -11.835 -9.127 8.881 1.00 3.00 O ATOM 245 N GLY 62 -10.020 -9.578 7.630 1.00 3.00 N ATOM 246 CA GLY 62 -10.751 -9.619 6.370 1.00 3.00 C ATOM 247 C GLY 62 -11.161 -11.021 5.956 1.00 3.00 C ATOM 248 O GLY 62 -11.237 -11.347 4.753 1.00 3.00 O ATOM 249 N GLU 63 -11.430 -11.840 6.962 1.00 9.00 N ATOM 250 CA GLU 63 -11.858 -13.214 6.751 1.00 9.00 C ATOM 251 C GLU 63 -10.852 -13.896 5.830 1.00 9.00 C ATOM 252 O GLU 63 -11.236 -14.695 4.951 1.00 9.00 O ATOM 253 N ILE 64 -9.573 -13.574 6.024 1.00 3.00 N ATOM 254 CA ILE 64 -8.534 -14.176 5.198 1.00 3.00 C ATOM 255 C ILE 64 -8.116 -13.420 3.949 1.00 3.00 C ATOM 256 O ILE 64 -7.212 -13.860 3.240 1.00 3.00 O ATOM 257 N PHE 65 -8.772 -12.301 3.625 1.00 3.00 N ATOM 258 CA PHE 65 -8.359 -11.557 2.439 1.00 3.00 C ATOM 259 C PHE 65 -7.039 -10.792 2.702 1.00 3.00 C ATOM 260 O PHE 65 -6.765 -10.376 3.837 1.00 3.00 O ATOM 261 N VAL 66 -6.211 -10.608 1.667 1.00 3.00 N ATOM 262 CA VAL 66 -4.964 -9.911 1.878 1.00 3.00 C ATOM 263 C VAL 66 -3.645 -10.513 1.437 1.00 3.00 C ATOM 264 O VAL 66 -2.871 -10.987 2.270 1.00 3.00 O ATOM 265 N LYS 67 -3.394 -10.506 0.136 1.00 3.00 N ATOM 266 CA LYS 67 -2.146 -11.022 -0.396 1.00 3.00 C ATOM 267 C LYS 67 -1.586 -10.039 -1.419 1.00 3.00 C ATOM 268 O LYS 67 -2.335 -9.404 -2.160 1.00 3.00 O ATOM 269 N LEU 68 -0.266 -9.894 -1.421 1.00 3.00 N ATOM 270 CA LEU 68 0.428 -9.030 -2.373 1.00 3.00 C ATOM 271 C LEU 68 1.429 -9.976 -3.007 1.00 3.00 C ATOM 272 O LEU 68 2.328 -10.486 -2.338 1.00 3.00 O ATOM 273 N VAL 69 1.265 -10.230 -4.296 1.00 3.00 N ATOM 274 CA VAL 69 2.139 -11.176 -4.968 1.00 3.00 C ATOM 275 C VAL 69 2.653 -10.726 -6.323 1.00 3.00 C ATOM 276 O VAL 69 1.932 -10.082 -7.090 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 268 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 80.19 48.5 132 100.0 132 ARMSMC SECONDARY STRUCTURE . . 66.36 58.2 98 100.0 98 ARMSMC SURFACE . . . . . . . . 80.36 49.0 96 100.0 96 ARMSMC BURIED . . . . . . . . 79.73 47.2 36 100.0 36 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 54 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 49 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 40 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 41 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 44 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 33 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 33 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 35 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 19 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 15 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 21 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 11 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 8 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.69 (Number of atoms: 67) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.69 67 100.0 67 CRMSCA CRN = ALL/NP . . . . . 0.1595 CRMSCA SECONDARY STRUCTURE . . 9.80 49 100.0 49 CRMSCA SURFACE . . . . . . . . 11.06 49 100.0 49 CRMSCA BURIED . . . . . . . . 9.60 18 100.0 18 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.53 268 81.7 328 CRMSMC SECONDARY STRUCTURE . . 9.64 196 81.3 241 CRMSMC SURFACE . . . . . . . . 10.90 196 81.7 240 CRMSMC BURIED . . . . . . . . 9.45 72 81.8 88 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 810 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 772 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 615 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 610 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 200 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.53 268 24.9 1078 CRMSALL SECONDARY STRUCTURE . . 9.64 196 24.2 811 CRMSALL SURFACE . . . . . . . . 10.90 196 24.3 806 CRMSALL BURIED . . . . . . . . 9.45 72 26.5 272 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.608 0.454 0.241 67 100.0 67 ERRCA SECONDARY STRUCTURE . . 5.742 0.417 0.227 49 100.0 49 ERRCA SURFACE . . . . . . . . 6.900 0.461 0.235 49 100.0 49 ERRCA BURIED . . . . . . . . 5.814 0.434 0.256 18 100.0 18 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.494 0.448 0.238 268 81.7 328 ERRMC SECONDARY STRUCTURE . . 5.682 0.414 0.225 196 81.3 241 ERRMC SURFACE . . . . . . . . 6.768 0.455 0.236 196 81.7 240 ERRMC BURIED . . . . . . . . 5.747 0.428 0.243 72 81.8 88 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 810 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 772 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 615 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 610 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 200 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.494 0.448 0.238 268 24.9 1078 ERRALL SECONDARY STRUCTURE . . 5.682 0.414 0.225 196 24.2 811 ERRALL SURFACE . . . . . . . . 6.768 0.455 0.236 196 24.3 806 ERRALL BURIED . . . . . . . . 5.747 0.428 0.243 72 26.5 272 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 1 2 14 39 67 67 DISTCA CA (P) 1.49 1.49 2.99 20.90 58.21 67 DISTCA CA (RMS) 0.66 0.66 2.12 3.91 6.33 DISTCA ALL (N) 2 2 15 62 160 268 1078 DISTALL ALL (P) 0.19 0.19 1.39 5.75 14.84 1078 DISTALL ALL (RMS) 0.71 0.71 2.43 3.90 6.31 DISTALL END of the results output