####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 120 ( 591), selected 120 , name T0557TS444_1-D1 # Molecule2: number of CA atoms 120 ( 1854), selected 120 , name T0557-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0557TS444_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 56 - 83 4.89 28.26 LONGEST_CONTINUOUS_SEGMENT: 28 57 - 84 4.81 27.52 LCS_AVERAGE: 17.62 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 72 - 85 1.87 29.48 LONGEST_CONTINUOUS_SEGMENT: 14 73 - 86 1.94 30.74 LCS_AVERAGE: 8.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 73 - 82 0.98 31.09 LCS_AVERAGE: 5.08 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 120 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT M 1 M 1 3 8 14 0 3 3 4 4 10 13 13 14 15 25 31 35 39 40 42 43 44 47 49 LCS_GDT R 2 R 2 8 12 14 3 7 8 9 12 12 13 13 14 15 15 16 17 20 26 35 38 43 47 49 LCS_GDT S 3 S 3 8 12 14 3 7 8 9 12 12 13 13 14 15 15 15 17 19 20 22 23 26 29 39 LCS_GDT A 4 A 4 8 12 14 3 7 8 9 12 12 13 13 14 15 15 15 17 19 20 22 23 24 29 33 LCS_GDT T 5 T 5 8 12 14 3 7 8 9 12 12 13 13 14 15 15 15 17 19 20 22 23 24 29 33 LCS_GDT D 6 D 6 8 12 14 4 7 8 9 12 12 13 13 14 15 15 15 17 19 20 22 24 25 29 33 LCS_GDT L 7 L 7 8 12 14 4 7 8 9 12 12 13 13 14 15 15 15 17 20 26 35 38 43 47 49 LCS_GDT L 8 L 8 8 12 14 4 7 8 9 12 12 13 13 14 15 15 15 17 19 20 22 24 40 45 49 LCS_GDT D 9 D 9 8 12 14 4 6 8 9 12 12 13 13 14 15 15 15 17 19 20 22 24 30 45 49 LCS_GDT E 10 E 10 6 12 14 4 6 7 9 12 12 13 13 14 15 15 15 17 19 26 35 38 40 45 49 LCS_GDT L 11 L 11 6 12 14 4 6 7 9 12 12 13 13 14 15 15 15 17 25 27 35 38 43 47 49 LCS_GDT N 12 N 12 6 12 14 3 6 7 9 12 12 13 13 14 15 15 15 17 19 26 35 38 40 45 49 LCS_GDT A 13 A 13 6 12 16 3 6 7 8 12 12 13 13 14 15 15 15 17 20 26 35 38 43 47 49 LCS_GDT R 19 R 19 3 4 17 0 3 3 6 9 12 14 18 20 23 27 30 35 39 40 42 43 44 47 49 LCS_GDT I 20 I 20 3 4 17 0 3 3 5 8 12 14 15 16 17 18 19 29 32 33 34 35 39 43 45 LCS_GDT E 21 E 21 3 4 17 1 3 3 3 4 6 7 10 12 14 15 19 23 24 26 29 30 36 39 40 LCS_GDT A 22 A 22 3 3 17 1 3 3 3 4 6 7 9 12 14 15 18 19 22 23 25 27 30 30 33 LCS_GDT K 23 K 23 3 4 17 0 3 3 4 4 6 7 10 12 14 15 16 19 21 22 25 27 28 28 30 LCS_GDT R 24 R 24 5 6 17 3 4 5 5 5 7 8 10 12 14 15 16 19 19 20 22 24 25 27 29 LCS_GDT A 25 A 25 5 6 17 3 4 5 6 6 6 8 9 10 12 15 16 19 19 20 22 24 25 27 29 LCS_GDT S 26 S 26 5 6 17 3 4 5 6 6 6 8 10 12 14 15 16 19 19 20 22 24 25 27 29 LCS_GDT D 27 D 27 5 6 17 3 4 5 5 5 6 7 9 12 14 15 16 19 19 20 22 24 25 27 29 LCS_GDT M 28 M 28 5 6 17 3 4 5 5 5 6 7 8 11 14 15 16 19 19 20 22 24 25 27 29 LCS_GDT G 29 G 29 3 6 17 3 3 3 4 5 6 7 9 12 14 15 16 19 19 20 22 24 25 27 29 LCS_GDT K 30 K 30 3 4 17 3 3 3 4 5 6 7 10 12 14 15 16 19 19 20 22 24 25 28 30 LCS_GDT S 31 S 31 3 3 17 3 4 4 6 8 10 10 11 11 15 15 16 19 19 20 22 24 26 28 34 LCS_GDT V 32 V 32 3 3 17 3 4 4 6 6 10 10 11 12 14 15 16 19 19 20 22 24 26 29 34 LCS_GDT M 33 M 33 3 3 17 3 4 4 6 6 6 8 10 11 14 15 16 20 22 25 28 32 36 40 43 LCS_GDT E 34 E 34 3 3 17 2 3 3 5 5 7 10 11 16 20 24 30 33 36 40 42 43 44 46 49 LCS_GDT T 35 T 35 5 10 20 4 5 6 9 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT V 36 V 36 5 10 20 4 5 6 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT I 37 I 37 6 10 20 4 5 8 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT A 38 A 38 7 10 20 4 6 8 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT F 39 F 39 7 10 20 4 6 8 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT A 40 A 40 7 10 20 3 6 8 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT N 41 N 41 7 10 20 4 6 8 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT E 42 E 42 7 10 20 4 6 8 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT P 43 P 43 7 10 20 4 6 7 9 11 12 14 18 24 26 29 32 36 39 40 42 43 44 47 49 LCS_GDT G 44 G 44 7 10 20 4 6 7 9 11 12 14 18 22 26 29 32 36 39 40 42 43 44 47 49 LCS_GDT L 45 L 45 6 10 20 3 5 6 7 8 12 14 16 20 23 24 30 35 39 40 42 43 44 47 49 LCS_GDT D 46 D 46 6 9 20 3 5 6 7 8 12 14 15 16 16 18 19 23 24 26 29 30 36 41 46 LCS_GDT G 47 G 47 6 9 20 4 5 6 7 8 12 14 15 16 16 18 19 23 24 26 29 30 31 34 34 LCS_GDT G 48 G 48 6 9 20 4 4 6 7 8 12 14 15 16 16 18 19 23 24 26 29 30 31 34 42 LCS_GDT Y 49 Y 49 6 9 20 4 5 6 7 8 12 14 15 16 16 18 19 23 24 26 29 30 31 34 35 LCS_GDT L 50 L 50 6 9 20 4 5 6 7 8 10 14 15 16 16 18 18 20 22 26 29 30 31 34 34 LCS_GDT L 51 L 51 6 9 20 4 5 6 7 8 12 14 15 16 16 18 19 23 24 26 29 30 31 34 34 LCS_GDT L 52 L 52 6 13 20 4 5 6 8 11 13 15 15 16 16 18 19 23 24 26 29 30 31 34 34 LCS_GDT G 53 G 53 7 13 20 4 6 7 11 11 12 15 15 16 16 18 19 23 24 26 29 30 31 34 34 LCS_GDT V 54 V 54 7 13 20 3 6 7 11 11 12 15 15 16 16 18 18 20 23 26 29 30 31 34 34 LCS_GDT D 55 D 55 7 13 26 3 6 7 11 11 13 15 15 16 16 18 18 20 22 24 29 30 31 34 34 LCS_GDT W 56 W 56 8 13 28 3 6 8 11 11 13 15 15 16 16 17 17 22 24 29 31 34 39 43 48 LCS_GDT A 57 A 57 8 13 28 4 6 8 11 11 13 15 15 16 16 20 22 24 27 29 31 34 39 43 48 LCS_GDT I 58 I 58 8 13 28 4 6 8 11 11 13 15 17 19 20 22 26 26 28 30 33 38 43 45 48 LCS_GDT N 59 N 59 8 13 28 4 6 8 11 11 13 15 17 19 20 22 26 26 28 30 33 39 43 45 48 LCS_GDT D 60 D 60 8 13 28 4 6 8 11 11 13 15 16 16 20 22 26 26 28 30 33 38 43 45 48 LCS_GDT K 61 K 61 8 13 28 4 6 8 11 11 13 15 17 19 20 22 26 26 28 30 33 35 37 41 46 LCS_GDT G 62 G 62 8 13 28 4 6 8 11 11 13 15 17 19 20 22 26 26 28 30 33 35 37 41 46 LCS_GDT D 63 D 63 8 13 28 4 6 8 11 11 13 15 17 19 20 22 26 26 28 30 33 35 37 42 46 LCS_GDT T 64 T 64 7 13 28 4 6 8 10 11 13 15 16 19 20 22 26 26 28 30 33 38 43 45 48 LCS_GDT V 65 V 65 6 11 28 4 4 7 8 10 12 14 17 19 20 22 26 26 30 35 38 41 43 46 48 LCS_GDT Y 66 Y 66 6 11 28 4 4 6 8 10 12 14 17 19 20 22 26 30 36 38 40 41 43 46 48 LCS_GDT R 67 R 67 6 10 28 4 4 6 7 10 12 14 18 21 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT P 68 P 68 6 10 28 4 4 6 7 9 12 16 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT V 69 V 69 6 10 28 3 6 8 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT G 70 G 70 6 10 28 3 4 6 8 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT L 71 L 71 3 10 28 3 3 4 9 10 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT P 72 P 72 3 14 28 3 3 4 6 9 13 15 16 19 22 27 32 36 39 40 42 43 44 47 49 LCS_GDT D 73 D 73 10 14 28 3 8 11 12 13 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT P 74 P 74 10 14 28 4 8 11 12 14 15 17 18 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT D 75 D 75 10 14 28 4 8 11 12 14 15 17 17 19 22 27 30 33 36 39 42 43 44 47 49 LCS_GDT K 76 K 76 10 14 28 4 8 11 12 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT V 77 V 77 10 14 28 4 8 11 12 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT Q 78 Q 78 10 14 28 3 8 10 12 14 15 17 17 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT R 79 R 79 10 14 28 3 8 11 12 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT D 80 D 80 10 14 28 4 8 11 12 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT L 81 L 81 10 14 28 4 6 11 12 14 15 17 17 18 19 25 29 36 39 40 42 43 44 47 49 LCS_GDT A 82 A 82 10 14 28 3 7 11 12 14 15 17 17 19 23 30 30 36 39 40 42 43 44 47 49 LCS_GDT S 83 S 83 8 14 28 5 7 11 12 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT Q 84 Q 84 8 14 28 5 7 11 12 14 15 17 18 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT C 85 C 85 8 14 27 5 7 9 11 14 15 17 17 18 22 30 32 36 39 40 42 43 44 47 49 LCS_GDT A 86 A 86 8 14 27 5 7 9 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT S 87 S 87 8 13 27 5 7 9 11 12 14 17 18 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT M 88 M 88 8 13 27 4 7 9 11 14 15 17 18 20 23 27 30 36 39 40 42 43 44 47 49 LCS_GDT L 89 L 89 8 13 27 4 7 8 11 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT N 90 N 90 4 12 27 3 3 4 8 8 10 13 18 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT V 91 V 91 4 4 27 3 3 4 4 7 9 13 19 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT A 92 A 92 4 4 27 3 3 4 4 6 7 10 14 22 25 29 32 36 39 40 42 43 44 47 49 LCS_GDT L 93 L 93 3 3 27 3 3 3 4 4 5 7 8 15 18 24 28 34 38 40 42 43 44 47 49 LCS_GDT R 94 R 94 3 3 13 3 4 4 4 4 5 7 8 11 15 18 25 29 33 39 42 43 44 47 49 LCS_GDT P 95 P 95 3 3 13 3 4 4 4 4 7 9 11 15 15 18 22 26 33 39 42 42 44 47 49 LCS_GDT E 96 E 96 3 3 13 3 4 4 4 4 9 10 11 13 15 17 19 23 26 27 28 31 37 42 45 LCS_GDT M 97 M 97 3 3 20 3 3 3 3 4 12 13 13 13 15 17 19 22 25 27 28 31 32 34 35 LCS_GDT Q 98 Q 98 3 3 20 0 3 3 5 5 7 8 9 12 15 19 21 23 26 27 28 31 32 34 35 LCS_GDT L 99 L 99 3 3 20 3 3 3 5 5 7 7 9 10 15 19 21 22 24 27 28 30 31 34 35 LCS_GDT E 100 E 100 3 3 20 3 3 3 3 4 5 7 9 11 16 19 21 22 24 27 28 30 31 34 35 LCS_GDT Q 101 Q 101 3 10 20 3 3 3 5 7 7 11 15 16 17 19 21 22 24 27 28 30 31 34 35 LCS_GDT V 102 V 102 7 12 20 3 5 7 9 11 13 13 15 16 17 19 21 22 23 27 28 30 31 34 35 LCS_GDT G 103 G 103 8 12 20 3 6 8 9 11 13 13 15 16 17 19 21 22 23 26 27 30 31 34 35 LCS_GDT G 104 G 104 8 12 20 4 6 8 9 11 13 13 15 16 17 19 21 22 23 26 27 30 31 34 35 LCS_GDT K 105 K 105 8 12 20 4 6 8 9 11 13 13 15 16 17 19 21 22 23 26 27 30 31 34 35 LCS_GDT T 106 T 106 8 12 20 4 6 8 9 11 13 13 15 16 17 19 21 22 23 27 28 30 31 34 35 LCS_GDT L 107 L 107 8 12 20 4 6 8 9 11 13 13 15 16 17 19 21 22 24 27 28 30 31 34 35 LCS_GDT L 108 L 108 8 12 20 4 6 8 9 11 13 13 15 16 17 19 21 23 26 27 28 31 32 34 35 LCS_GDT V 109 V 109 8 12 20 4 6 8 9 11 13 13 15 16 17 19 21 24 26 28 31 32 35 43 49 LCS_GDT V 110 V 110 8 12 20 4 6 8 9 11 13 13 15 16 17 20 22 26 26 34 38 39 43 46 49 LCS_GDT Y 111 Y 111 8 12 20 3 6 8 9 11 13 15 18 24 27 30 32 36 39 40 42 43 44 47 49 LCS_GDT V 112 V 112 6 12 20 4 5 7 9 11 13 13 15 19 22 27 30 33 36 38 38 40 43 46 48 LCS_GDT P 113 P 113 6 12 20 4 5 7 8 10 13 13 15 16 17 18 21 22 23 26 27 29 31 41 46 LCS_GDT E 114 E 114 4 9 20 3 3 6 7 9 10 13 14 16 17 18 21 22 23 26 27 30 31 34 35 LCS_GDT A 115 A 115 4 9 20 0 3 6 7 11 13 13 15 16 17 19 21 22 23 26 27 30 31 34 35 LCS_GDT D 116 D 116 5 6 20 4 4 5 6 6 7 7 10 11 15 19 21 21 23 26 27 30 31 34 35 LCS_GDT V 117 V 117 5 6 20 4 4 5 6 6 7 7 10 11 12 14 18 21 23 26 27 30 31 34 35 LCS_GDT T 118 T 118 5 6 20 4 4 5 6 6 7 8 10 11 12 15 19 21 23 26 27 30 31 34 35 LCS_GDT H 119 H 119 5 6 20 4 4 5 6 6 7 9 11 14 15 16 17 20 22 23 26 28 30 34 35 LCS_GDT K 120 K 120 5 6 20 3 4 5 6 6 7 8 10 11 12 14 16 20 22 23 26 30 31 34 35 LCS_GDT P 121 P 121 4 6 20 3 3 4 6 6 7 8 10 11 12 14 14 17 18 23 24 25 26 33 35 LCS_GDT I 122 I 122 3 6 19 3 3 4 6 6 7 8 10 11 12 14 16 17 19 23 24 25 28 33 35 LCS_GDT Y 123 Y 123 3 6 14 3 4 4 9 11 12 13 14 16 16 16 17 21 24 30 32 34 36 41 42 LCS_GDT K 124 K 124 3 6 14 4 6 8 10 10 13 15 15 16 16 18 21 24 28 30 33 34 37 41 42 LCS_GDT K 125 K 125 3 5 14 0 3 3 10 11 13 15 15 16 16 16 17 20 24 29 31 34 36 37 39 LCS_AVERAGE LCS_A: 10.23 ( 5.08 8.00 17.62 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 8 11 12 14 15 17 19 24 27 30 32 36 39 40 42 43 44 47 49 GDT PERCENT_AT 4.17 6.67 9.17 10.00 11.67 12.50 14.17 15.83 20.00 22.50 25.00 26.67 30.00 32.50 33.33 35.00 35.83 36.67 39.17 40.83 GDT RMS_LOCAL 0.19 0.74 1.13 1.19 1.79 1.92 2.23 2.59 3.13 3.42 3.71 4.01 4.35 4.65 4.76 5.00 5.14 5.28 5.95 6.78 GDT RMS_ALL_AT 36.03 30.14 30.82 30.25 19.44 19.48 19.16 18.75 18.76 18.68 18.69 18.78 18.82 19.01 18.95 18.86 18.82 18.76 18.75 18.88 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA M 1 M 1 6.860 3 0.529 0.552 10.366 4.762 7.024 LGA R 2 R 2 11.955 6 0.652 0.603 13.484 0.357 0.130 LGA S 3 S 3 15.969 1 0.128 0.178 17.572 0.000 0.000 LGA A 4 A 4 16.368 0 0.130 0.134 18.062 0.000 0.000 LGA T 5 T 5 19.435 2 0.079 0.091 21.351 0.000 0.000 LGA D 6 D 6 15.914 3 0.098 0.106 16.926 0.000 0.000 LGA L 7 L 7 11.665 3 0.095 0.103 13.286 0.000 0.000 LGA L 8 L 8 13.676 3 0.128 0.130 15.193 0.000 0.000 LGA D 9 D 9 14.021 3 0.037 0.041 15.261 0.000 0.000 LGA E 10 E 10 11.934 4 0.129 0.133 12.485 0.000 0.000 LGA L 11 L 11 11.171 3 0.167 0.177 12.067 0.000 0.000 LGA N 12 N 12 12.530 3 0.057 0.058 13.524 0.000 0.000 LGA A 13 A 13 11.285 0 0.038 0.037 11.523 0.000 0.000 LGA R 19 R 19 8.361 6 0.085 0.086 11.886 6.667 2.424 LGA I 20 I 20 11.125 3 0.608 0.552 11.822 0.357 0.179 LGA E 21 E 21 13.179 4 0.598 0.561 17.562 0.000 0.000 LGA A 22 A 22 16.421 0 0.625 0.564 17.776 0.000 0.000 LGA K 23 K 23 20.034 4 0.621 0.591 24.121 0.000 0.000 LGA R 24 R 24 25.799 6 0.581 0.579 28.558 0.000 0.000 LGA A 25 A 25 29.754 0 0.035 0.038 31.358 0.000 0.000 LGA S 26 S 26 28.388 1 0.085 0.089 29.439 0.000 0.000 LGA D 27 D 27 29.599 3 0.058 0.055 31.252 0.000 0.000 LGA M 28 M 28 31.771 3 0.586 0.535 32.651 0.000 0.000 LGA G 29 G 29 28.678 0 0.572 0.572 29.401 0.000 0.000 LGA K 30 K 30 23.972 4 0.664 0.614 25.688 0.000 0.000 LGA S 31 S 31 18.476 1 0.586 0.560 20.826 0.000 0.000 LGA V 32 V 32 16.789 2 0.584 0.572 18.581 0.000 0.000 LGA M 33 M 33 13.175 3 0.625 0.610 14.654 0.000 0.000 LGA E 34 E 34 7.465 4 0.631 0.605 9.165 21.548 10.106 LGA T 35 T 35 1.756 2 0.626 0.609 4.269 72.024 46.463 LGA V 36 V 36 1.601 2 0.071 0.082 2.293 72.976 50.952 LGA I 37 I 37 2.393 3 0.049 0.059 3.150 68.929 40.714 LGA A 38 A 38 1.466 0 0.173 0.184 1.793 85.952 83.333 LGA F 39 F 39 0.393 6 0.046 0.048 1.423 90.595 41.169 LGA A 40 A 40 1.965 0 0.137 0.141 3.325 67.262 66.762 LGA N 41 N 41 1.518 3 0.130 0.130 2.711 71.071 45.714 LGA E 42 E 42 2.930 4 0.177 0.198 4.272 51.071 29.894 LGA P 43 P 43 7.049 2 0.101 0.113 8.270 12.857 8.027 LGA G 44 G 44 8.054 0 0.475 0.475 10.001 3.690 3.690 LGA L 45 L 45 9.618 3 0.625 0.580 10.742 0.952 0.833 LGA D 46 D 46 14.842 3 0.221 0.273 17.028 0.000 0.000 LGA G 47 G 47 16.953 0 0.240 0.240 16.953 0.000 0.000 LGA G 48 G 48 13.862 0 0.168 0.168 17.641 0.000 0.000 LGA Y 49 Y 49 15.229 7 0.244 0.325 15.416 0.000 0.000 LGA L 50 L 50 17.484 3 0.131 0.160 19.798 0.000 0.000 LGA L 51 L 51 15.222 3 0.220 0.256 17.283 0.000 0.000 LGA L 52 L 52 17.969 3 0.087 0.095 18.393 0.000 0.000 LGA G 53 G 53 18.786 0 0.596 0.596 18.786 0.000 0.000 LGA V 54 V 54 15.435 2 0.044 0.076 19.527 0.000 0.000 LGA D 55 D 55 18.834 3 0.409 0.466 19.993 0.000 0.000 LGA W 56 W 56 17.487 9 0.116 0.178 21.405 0.000 0.000 LGA A 57 A 57 21.233 0 0.036 0.036 21.349 0.000 0.000 LGA I 58 I 58 24.507 3 0.091 0.116 27.170 0.000 0.000 LGA N 59 N 59 23.996 3 0.037 0.061 28.248 0.000 0.000 LGA D 60 D 60 29.001 3 0.105 0.105 32.815 0.000 0.000 LGA K 61 K 61 32.165 4 0.111 0.116 34.228 0.000 0.000 LGA G 62 G 62 31.113 0 0.054 0.054 31.113 0.000 0.000 LGA D 63 D 63 27.888 3 0.142 0.188 28.946 0.000 0.000 LGA T 64 T 64 22.892 2 0.197 0.240 24.860 0.000 0.000 LGA V 65 V 65 17.234 2 0.041 0.048 19.010 0.000 0.000 LGA Y 66 Y 66 13.736 7 0.122 0.152 15.384 0.000 0.000 LGA R 67 R 67 8.198 6 0.038 0.041 9.900 7.976 4.113 LGA P 68 P 68 5.092 2 0.132 0.158 6.438 26.667 18.299 LGA V 69 V 69 2.215 2 0.676 0.619 3.277 61.190 45.374 LGA G 70 G 70 2.772 0 0.652 0.652 3.894 59.524 59.524 LGA L 71 L 71 3.606 3 0.449 0.528 5.665 42.262 26.548 LGA P 72 P 72 6.013 2 0.671 0.615 8.326 32.262 19.116 LGA D 73 D 73 1.773 3 0.294 0.308 3.070 67.143 40.714 LGA P 74 P 74 5.622 2 0.091 0.083 7.737 27.500 16.735 LGA D 75 D 75 7.601 3 0.026 0.034 9.596 15.833 7.976 LGA K 76 K 76 3.422 4 0.049 0.054 4.392 62.500 31.905 LGA V 77 V 77 3.054 2 0.084 0.093 4.793 55.238 36.054 LGA Q 78 Q 78 5.757 4 0.036 0.046 7.382 27.619 13.386 LGA R 79 R 79 3.229 6 0.139 0.145 4.383 64.048 26.667 LGA D 80 D 80 3.391 3 0.119 0.122 5.621 46.071 26.310 LGA L 81 L 81 7.367 3 0.075 0.089 9.315 14.881 7.619 LGA A 82 A 82 6.247 0 0.104 0.108 7.425 25.714 22.571 LGA S 83 S 83 1.273 1 0.189 0.196 2.367 73.095 59.524 LGA Q 84 Q 84 5.161 4 0.087 0.104 7.818 34.762 16.243 LGA C 85 C 85 5.800 1 0.078 0.084 7.979 32.024 22.540 LGA A 86 A 86 3.301 0 0.189 0.194 5.087 51.905 46.762 LGA S 87 S 87 5.168 1 0.053 0.051 7.186 28.690 21.349 LGA M 88 M 88 6.919 3 0.132 0.135 8.178 16.667 8.929 LGA L 89 L 89 3.787 3 0.661 0.610 4.520 54.524 31.190 LGA N 90 N 90 4.897 3 0.154 0.161 7.279 27.738 15.119 LGA V 91 V 91 4.789 2 0.645 0.603 5.455 31.548 23.333 LGA A 92 A 92 6.857 0 0.572 0.557 8.714 13.690 11.905 LGA L 93 L 93 8.784 3 0.596 0.581 11.805 2.500 2.143 LGA R 94 R 94 10.417 6 0.567 0.568 10.652 0.357 0.130 LGA P 95 P 95 10.167 2 0.641 0.579 14.383 0.357 0.204 LGA E 96 E 96 16.555 4 0.501 0.460 19.547 0.000 0.000 LGA M 97 M 97 19.917 3 0.599 0.576 22.883 0.000 0.000 LGA Q 98 Q 98 23.111 4 0.622 0.577 26.590 0.000 0.000 LGA L 99 L 99 30.290 3 0.602 0.540 33.611 0.000 0.000 LGA E 100 E 100 33.501 4 0.528 0.571 35.731 0.000 0.000 LGA Q 101 Q 101 35.385 4 0.582 0.565 36.704 0.000 0.000 LGA V 102 V 102 36.864 2 0.620 0.567 40.453 0.000 0.000 LGA G 103 G 103 44.028 0 0.149 0.149 46.420 0.000 0.000 LGA G 104 G 104 43.981 0 0.182 0.182 43.981 0.000 0.000 LGA K 105 K 105 38.594 4 0.074 0.098 40.425 0.000 0.000 LGA T 106 T 106 31.339 2 0.181 0.201 34.082 0.000 0.000 LGA L 107 L 107 26.960 3 0.027 0.048 28.349 0.000 0.000 LGA L 108 L 108 20.056 3 0.152 0.177 22.854 0.000 0.000 LGA V 109 V 109 14.755 2 0.163 0.191 16.443 0.000 0.000 LGA V 110 V 110 11.000 2 0.162 0.178 13.229 0.476 0.272 LGA Y 111 Y 111 5.344 7 0.077 0.081 6.912 18.452 10.317 LGA V 112 V 112 9.986 2 0.171 0.195 12.151 2.024 1.156 LGA P 113 P 113 13.053 2 0.061 0.087 14.630 0.000 0.000 LGA E 114 E 114 17.168 4 0.640 0.580 19.520 0.000 0.000 LGA A 115 A 115 22.478 0 0.662 0.620 24.890 0.000 0.000 LGA D 116 D 116 24.155 3 0.587 0.581 25.918 0.000 0.000 LGA V 117 V 117 26.838 2 0.056 0.063 30.092 0.000 0.000 LGA T 118 T 118 32.208 2 0.076 0.088 33.922 0.000 0.000 LGA H 119 H 119 30.408 5 0.036 0.037 30.856 0.000 0.000 LGA K 120 K 120 28.442 4 0.063 0.106 29.394 0.000 0.000 LGA P 121 P 121 28.667 2 0.129 0.157 30.151 0.000 0.000 LGA I 122 I 122 22.836 3 0.022 0.047 24.801 0.000 0.000 LGA Y 123 Y 123 22.180 7 0.675 0.624 23.606 0.000 0.000 LGA K 124 K 124 20.439 4 0.585 0.586 22.166 0.000 0.000 LGA K 125 K 125 25.870 4 0.445 0.432 28.352 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 120 480 480 100.00 919 591 64.31 120 SUMMARY(RMSD_GDC): 17.020 17.061 17.017 13.803 9.262 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 120 120 4.0 19 2.59 16.875 15.048 0.708 LGA_LOCAL RMSD: 2.585 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.755 Number of assigned atoms: 120 Std_ASGN_ATOMS RMSD: 17.020 Standard rmsd on all 120 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.109631 * X + 0.697153 * Y + -0.708490 * Z + 12.721255 Y_new = -0.051971 * X + 0.715832 * Y + 0.696336 * Z + -8.427845 Z_new = 0.992613 * X + -0.039519 * Y + 0.114709 * Z + 3.099476 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.442675 -1.449171 -0.331782 [DEG: -25.3634 -83.0314 -19.0097 ] ZXZ: -2.347543 1.455834 1.610589 [DEG: -134.5043 83.4132 92.2799 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0557TS444_1-D1 REMARK 2: T0557-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0557TS444_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 120 120 4.0 19 2.59 15.048 17.02 REMARK ---------------------------------------------------------- MOLECULE T0557TS444_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0557 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N MET 1 -1.354 -0.387 6.961 1.00 1.00 N ATOM 2 CA MET 1 -2.762 -0.051 6.990 1.00 1.00 C ATOM 3 C MET 1 -2.970 1.272 7.713 1.00 1.00 C ATOM 4 O MET 1 -3.455 2.234 7.122 1.00 1.00 O ATOM 5 CB MET 1 -3.529 -1.151 7.718 1.00 1.00 C ATOM 6 N ARG 2 -2.602 1.317 8.995 1.00 1.00 N ATOM 7 CA ARG 2 -2.749 2.518 9.792 1.00 1.00 C ATOM 8 C ARG 2 -1.640 3.506 9.458 1.00 1.00 C ATOM 9 O ARG 2 -1.799 4.709 9.653 1.00 1.00 O ATOM 10 CB ARG 2 -2.675 2.156 11.272 1.00 1.00 C ATOM 11 N SER 3 -0.514 2.993 8.954 1.00 1.00 N ATOM 12 CA SER 3 0.613 3.830 8.595 1.00 1.00 C ATOM 13 C SER 3 0.609 4.099 7.097 1.00 1.00 C ATOM 14 O SER 3 0.641 3.167 6.298 1.00 1.00 O ATOM 15 CB SER 3 1.908 3.122 8.979 1.00 1.00 C ATOM 16 N ALA 4 0.567 5.379 6.721 1.00 1.00 N ATOM 17 CA ALA 4 0.558 5.767 5.325 1.00 1.00 C ATOM 18 C ALA 4 1.714 5.103 4.589 1.00 1.00 C ATOM 19 O ALA 4 1.717 5.043 3.362 1.00 1.00 O ATOM 20 CB ALA 4 0.697 7.282 5.220 1.00 1.00 C ATOM 21 N THR 5 2.696 4.604 5.345 1.00 1.00 N ATOM 22 CA THR 5 3.850 3.948 4.765 1.00 1.00 C ATOM 23 C THR 5 3.431 2.644 4.101 1.00 1.00 C ATOM 24 O THR 5 3.867 2.343 2.991 1.00 1.00 O ATOM 25 CB THR 5 4.868 3.652 5.862 1.00 1.00 C ATOM 26 N ASP 6 2.584 1.870 4.782 1.00 1.00 N ATOM 27 CA ASP 6 2.110 0.605 4.259 1.00 1.00 C ATOM 28 C ASP 6 0.858 0.822 3.421 1.00 1.00 C ATOM 29 O ASP 6 0.472 -0.047 2.644 1.00 1.00 O ATOM 30 CB ASP 6 1.789 -0.333 5.417 1.00 1.00 C ATOM 31 N LEU 7 0.224 1.985 3.584 1.00 1.00 N ATOM 32 CA LEU 7 -0.979 2.312 2.846 1.00 1.00 C ATOM 33 C LEU 7 -0.695 2.296 1.351 1.00 1.00 C ATOM 34 O LEU 7 -1.610 2.131 0.546 1.00 1.00 O ATOM 35 CB LEU 7 -1.463 3.700 3.254 1.00 1.00 C ATOM 36 N LEU 8 0.576 2.466 0.982 1.00 1.00 N ATOM 37 CA LEU 8 0.974 2.471 -0.411 1.00 1.00 C ATOM 38 C LEU 8 0.624 1.140 -1.060 1.00 1.00 C ATOM 39 O LEU 8 -0.014 1.108 -2.111 1.00 1.00 O ATOM 40 CB LEU 8 2.480 2.698 -0.506 1.00 1.00 C ATOM 41 N ASP 9 1.041 0.039 -0.431 1.00 1.00 N ATOM 42 CA ASP 9 0.771 -1.287 -0.946 1.00 1.00 C ATOM 43 C ASP 9 -0.581 -1.776 -0.447 1.00 1.00 C ATOM 44 O ASP 9 -1.318 -2.426 -1.185 1.00 1.00 O ATOM 45 CB ASP 9 1.861 -2.245 -0.475 1.00 1.00 C ATOM 46 N GLU 10 -0.903 -1.463 0.810 1.00 1.00 N ATOM 47 CA GLU 10 -2.161 -1.871 1.403 1.00 1.00 C ATOM 48 C GLU 10 -3.277 -0.937 0.955 1.00 1.00 C ATOM 49 O GLU 10 -4.446 -1.316 0.966 1.00 1.00 O ATOM 50 CB GLU 10 -2.043 -1.825 2.923 1.00 1.00 C ATOM 51 N LEU 11 -2.912 0.284 0.559 1.00 1.00 N ATOM 52 CA LEU 11 -3.879 1.265 0.110 1.00 1.00 C ATOM 53 C LEU 11 -3.971 1.251 -1.410 1.00 1.00 C ATOM 54 O LEU 11 -4.935 1.757 -1.978 1.00 1.00 O ATOM 55 CB LEU 11 -3.448 2.652 0.578 1.00 1.00 C ATOM 56 N ASN 12 -2.964 0.669 -2.063 1.00 1.00 N ATOM 57 CA ASN 12 -2.933 0.591 -3.510 1.00 1.00 C ATOM 58 C ASN 12 -3.765 -0.590 -3.988 1.00 1.00 C ATOM 59 O ASN 12 -4.035 -0.719 -5.180 1.00 1.00 O ATOM 60 CB ASN 12 -1.491 0.416 -3.977 1.00 1.00 C ATOM 61 N ALA 13 -4.173 -1.452 -3.054 1.00 1.00 N ATOM 62 CA ALA 13 -4.970 -2.616 -3.382 1.00 1.00 C ATOM 63 C ALA 13 -6.301 -2.185 -3.983 1.00 1.00 C ATOM 64 O ALA 13 -6.735 -2.735 -4.992 1.00 1.00 O ATOM 65 CB ALA 13 -5.227 -3.426 -2.114 1.00 1.00 C ATOM 91 N ARG 19 -8.483 3.618 -9.595 1.00 1.00 N ATOM 92 CA ARG 19 -8.166 4.528 -10.678 1.00 1.00 C ATOM 93 C ARG 19 -9.148 4.339 -11.826 1.00 1.00 C ATOM 94 O ARG 19 -9.395 5.267 -12.592 1.00 1.00 O ATOM 95 CB ARG 19 -6.751 4.252 -11.173 1.00 1.00 C ATOM 96 N ILE 20 -9.708 3.132 -11.940 1.00 1.00 N ATOM 97 CA ILE 20 -10.658 2.825 -12.990 1.00 1.00 C ATOM 98 C ILE 20 -11.571 4.019 -13.234 1.00 1.00 C ATOM 99 O ILE 20 -12.065 4.207 -14.342 1.00 1.00 O ATOM 100 CB ILE 20 -11.498 1.622 -12.577 1.00 1.00 C ATOM 101 N GLU 21 -11.793 4.825 -12.192 1.00 1.00 N ATOM 102 CA GLU 21 -12.643 5.993 -12.296 1.00 1.00 C ATOM 103 C GLU 21 -12.195 6.863 -13.462 1.00 1.00 C ATOM 104 O GLU 21 -13.025 7.377 -14.208 1.00 1.00 O ATOM 105 CB GLU 21 -12.557 6.798 -11.003 1.00 1.00 C ATOM 106 N ALA 22 -10.879 7.028 -13.614 1.00 1.00 N ATOM 107 CA ALA 22 -10.328 7.834 -14.685 1.00 1.00 C ATOM 108 C ALA 22 -10.736 7.260 -16.035 1.00 1.00 C ATOM 109 O ALA 22 -10.795 7.984 -17.026 1.00 1.00 O ATOM 110 CB ALA 22 -8.807 7.841 -14.578 1.00 1.00 C ATOM 111 N LYS 23 -11.015 5.954 -16.068 1.00 1.00 N ATOM 112 CA LYS 23 -11.415 5.290 -17.292 1.00 1.00 C ATOM 113 C LYS 23 -12.821 5.718 -17.687 1.00 1.00 C ATOM 114 O LYS 23 -13.118 5.866 -18.870 1.00 1.00 O ATOM 115 CB LYS 23 -11.387 3.780 -17.080 1.00 1.00 C ATOM 116 N ARG 24 -13.685 5.919 -16.689 1.00 1.00 N ATOM 117 CA ARG 24 -15.054 6.330 -16.933 1.00 1.00 C ATOM 118 C ARG 24 -15.211 7.818 -16.655 1.00 1.00 C ATOM 119 O ARG 24 -15.879 8.524 -17.407 1.00 1.00 O ATOM 120 CB ARG 24 -15.988 5.544 -16.019 1.00 1.00 C ATOM 121 N ALA 25 -14.591 8.292 -15.572 1.00 1.00 N ATOM 122 CA ALA 25 -14.663 9.691 -15.199 1.00 1.00 C ATOM 123 C ALA 25 -14.020 10.552 -16.277 1.00 1.00 C ATOM 124 O ALA 25 -14.413 11.701 -16.470 1.00 1.00 O ATOM 125 CB ALA 25 -13.925 9.900 -13.880 1.00 1.00 C ATOM 126 N SER 26 -13.032 9.995 -16.979 1.00 1.00 N ATOM 127 CA SER 26 -12.340 10.711 -18.031 1.00 1.00 C ATOM 128 C SER 26 -13.293 11.680 -18.718 1.00 1.00 C ATOM 129 O SER 26 -12.956 12.844 -18.923 1.00 1.00 O ATOM 130 CB SER 26 -11.806 9.716 -19.055 1.00 1.00 C ATOM 131 N ASP 27 -14.485 11.194 -19.072 1.00 1.00 N ATOM 132 CA ASP 27 -15.480 12.016 -19.732 1.00 1.00 C ATOM 133 C ASP 27 -15.679 13.314 -18.965 1.00 1.00 C ATOM 134 O ASP 27 -16.422 14.189 -19.405 1.00 1.00 O ATOM 135 CB ASP 27 -16.802 11.257 -19.794 1.00 1.00 C ATOM 136 N MET 28 -15.012 13.438 -17.814 1.00 1.00 N ATOM 137 CA MET 28 -15.117 14.626 -16.992 1.00 1.00 C ATOM 138 C MET 28 -13.777 15.344 -16.936 1.00 1.00 C ATOM 139 O MET 28 -13.730 16.571 -16.872 1.00 1.00 O ATOM 140 CB MET 28 -15.540 14.230 -15.582 1.00 1.00 C ATOM 141 N GLY 29 -12.686 14.575 -16.958 1.00 1.00 N ATOM 142 CA GLY 29 -11.352 15.138 -16.909 1.00 1.00 C ATOM 143 C GLY 29 -11.144 15.880 -15.596 1.00 1.00 C ATOM 144 O GLY 29 -10.765 17.048 -15.596 1.00 1.00 O ATOM 145 N LYS 30 -11.394 15.196 -14.477 1.00 1.00 N ATOM 146 CA LYS 30 -11.233 15.788 -13.165 1.00 1.00 C ATOM 147 C LYS 30 -9.841 15.499 -12.627 1.00 1.00 C ATOM 148 O LYS 30 -9.290 14.426 -12.868 1.00 1.00 O ATOM 149 CB LYS 30 -12.274 15.203 -12.216 1.00 1.00 C ATOM 150 N SER 31 -9.271 16.459 -11.894 1.00 1.00 N ATOM 151 CA SER 31 -7.947 16.305 -11.325 1.00 1.00 C ATOM 152 C SER 31 -8.029 15.534 -10.015 1.00 1.00 C ATOM 153 O SER 31 -8.325 16.110 -8.971 1.00 1.00 O ATOM 154 CB SER 31 -7.345 17.682 -11.064 1.00 1.00 C ATOM 155 N VAL 32 -7.763 14.226 -10.073 1.00 1.00 N ATOM 156 CA VAL 32 -7.808 13.383 -8.896 1.00 1.00 C ATOM 157 C VAL 32 -6.450 12.731 -8.668 1.00 1.00 C ATOM 158 O VAL 32 -6.105 11.762 -9.339 1.00 1.00 O ATOM 159 CB VAL 32 -8.862 12.298 -9.089 1.00 1.00 C ATOM 160 N MET 33 -5.683 13.270 -7.717 1.00 1.00 N ATOM 161 CA MET 33 -4.368 12.742 -7.405 1.00 1.00 C ATOM 162 C MET 33 -4.488 11.608 -6.397 1.00 1.00 C ATOM 163 O MET 33 -5.470 11.529 -5.662 1.00 1.00 O ATOM 164 CB MET 33 -3.505 13.853 -6.818 1.00 1.00 C ATOM 165 N GLU 34 -3.484 10.728 -6.364 1.00 1.00 N ATOM 166 CA GLU 34 -3.481 9.603 -5.449 1.00 1.00 C ATOM 167 C GLU 34 -2.140 9.517 -4.734 1.00 1.00 C ATOM 168 O GLU 34 -1.099 9.785 -5.328 1.00 1.00 O ATOM 169 CB GLU 34 -3.723 8.317 -6.229 1.00 1.00 C ATOM 170 N THR 35 -2.169 9.139 -3.452 1.00 1.00 N ATOM 171 CA THR 35 -0.961 9.019 -2.662 1.00 1.00 C ATOM 172 C THR 35 -1.223 8.154 -1.438 1.00 1.00 C ATOM 173 O THR 35 -2.373 7.884 -1.100 1.00 1.00 O ATOM 174 CB THR 35 -0.510 10.405 -2.215 1.00 1.00 C ATOM 175 N VAL 36 -0.148 7.719 -0.774 1.00 1.00 N ATOM 176 CA VAL 36 -0.263 6.889 0.408 1.00 1.00 C ATOM 177 C VAL 36 -0.700 7.730 1.599 1.00 1.00 C ATOM 178 O VAL 36 -1.616 7.352 2.325 1.00 1.00 O ATOM 179 CB VAL 36 1.088 6.249 0.710 1.00 1.00 C ATOM 180 N ILE 37 -0.040 8.874 1.796 1.00 1.00 N ATOM 181 CA ILE 37 -0.360 9.763 2.895 1.00 1.00 C ATOM 182 C ILE 37 -1.693 10.456 2.636 1.00 1.00 C ATOM 183 O ILE 37 -2.468 10.675 3.563 1.00 1.00 O ATOM 184 CB ILE 37 0.736 10.814 3.033 1.00 1.00 C ATOM 185 N ALA 38 -1.953 10.797 1.372 1.00 1.00 N ATOM 186 CA ALA 38 -3.183 11.461 0.996 1.00 1.00 C ATOM 187 C ALA 38 -4.380 10.609 1.396 1.00 1.00 C ATOM 188 O ALA 38 -5.478 11.128 1.584 1.00 1.00 O ATOM 189 CB ALA 38 -3.200 11.678 -0.514 1.00 1.00 C ATOM 190 N PHE 39 -4.164 9.299 1.528 1.00 1.00 N ATOM 191 CA PHE 39 -5.221 8.383 1.906 1.00 1.00 C ATOM 192 C PHE 39 -6.069 8.990 3.014 1.00 1.00 C ATOM 193 O PHE 39 -7.287 8.823 3.026 1.00 1.00 O ATOM 194 CB PHE 39 -4.606 7.076 2.398 1.00 1.00 C ATOM 195 N ALA 40 -5.421 9.694 3.945 1.00 1.00 N ATOM 196 CA ALA 40 -6.115 10.323 5.050 1.00 1.00 C ATOM 197 C ALA 40 -6.896 11.534 4.558 1.00 1.00 C ATOM 198 O ALA 40 -8.056 11.714 4.920 1.00 1.00 O ATOM 199 CB ALA 40 -5.100 10.766 6.098 1.00 1.00 C ATOM 200 N ASN 41 -6.254 12.362 3.732 1.00 1.00 N ATOM 201 CA ASN 41 -6.887 13.550 3.195 1.00 1.00 C ATOM 202 C ASN 41 -7.174 13.364 1.712 1.00 1.00 C ATOM 203 O ASN 41 -7.390 14.337 0.993 1.00 1.00 O ATOM 204 CB ASN 41 -5.961 14.746 3.383 1.00 1.00 C ATOM 205 N GLU 42 -7.177 12.109 1.257 1.00 1.00 N ATOM 206 CA GLU 42 -7.438 11.800 -0.135 1.00 1.00 C ATOM 207 C GLU 42 -8.706 12.502 -0.598 1.00 1.00 C ATOM 208 O GLU 42 -9.649 12.657 0.174 1.00 1.00 O ATOM 209 CB GLU 42 -7.609 10.292 -0.294 1.00 1.00 C ATOM 210 N PRO 43 -8.726 12.926 -1.864 1.00 1.00 N ATOM 211 CA PRO 43 -9.875 13.607 -2.426 1.00 1.00 C ATOM 212 C PRO 43 -11.039 12.638 -2.568 1.00 1.00 C ATOM 213 O PRO 43 -10.883 11.555 -3.126 1.00 1.00 O ATOM 214 CB PRO 43 -9.511 14.167 -3.796 1.00 1.00 C ATOM 215 N GLY 44 -12.210 13.030 -2.057 1.00 1.00 N ATOM 216 CA GLY 44 -13.394 12.198 -2.128 1.00 1.00 C ATOM 217 C GLY 44 -13.999 12.268 -3.522 1.00 1.00 C ATOM 218 O GLY 44 -14.696 13.225 -3.852 1.00 1.00 O ATOM 219 N LEU 45 -13.730 11.248 -4.342 1.00 1.00 N ATOM 220 CA LEU 45 -14.248 11.196 -5.695 1.00 1.00 C ATOM 221 C LEU 45 -15.203 10.021 -5.844 1.00 1.00 C ATOM 222 O LEU 45 -15.067 9.015 -5.153 1.00 1.00 O ATOM 223 CB LEU 45 -13.089 11.031 -6.672 1.00 1.00 C ATOM 224 N ASP 46 -16.174 10.153 -6.753 1.00 1.00 N ATOM 225 CA ASP 46 -17.147 9.106 -6.990 1.00 1.00 C ATOM 226 C ASP 46 -16.722 8.256 -8.179 1.00 1.00 C ATOM 227 O ASP 46 -15.670 8.491 -8.769 1.00 1.00 O ATOM 228 CB ASP 46 -18.506 9.734 -7.278 1.00 1.00 C ATOM 229 N GLY 47 -17.546 7.265 -8.529 1.00 1.00 N ATOM 230 CA GLY 47 -17.256 6.384 -9.643 1.00 1.00 C ATOM 231 C GLY 47 -16.465 5.177 -9.162 1.00 1.00 C ATOM 232 O GLY 47 -15.236 5.195 -9.170 1.00 1.00 O ATOM 233 N GLY 48 -17.173 4.127 -8.740 1.00 1.00 N ATOM 234 CA GLY 48 -16.538 2.917 -8.257 1.00 1.00 C ATOM 235 C GLY 48 -16.064 2.071 -9.430 1.00 1.00 C ATOM 236 O GLY 48 -16.418 2.341 -10.575 1.00 1.00 O ATOM 237 N TYR 49 -15.262 1.043 -9.140 1.00 1.00 N ATOM 238 CA TYR 49 -14.744 0.164 -10.168 1.00 1.00 C ATOM 239 C TYR 49 -15.310 -1.238 -9.992 1.00 1.00 C ATOM 240 O TYR 49 -16.235 -1.442 -9.209 1.00 1.00 O ATOM 241 CB TYR 49 -13.223 0.110 -10.070 1.00 1.00 C ATOM 242 N LEU 50 -14.750 -2.205 -10.723 1.00 1.00 N ATOM 243 CA LEU 50 -15.198 -3.581 -10.646 1.00 1.00 C ATOM 244 C LEU 50 -14.226 -4.402 -9.812 1.00 1.00 C ATOM 245 O LEU 50 -13.063 -4.028 -9.667 1.00 1.00 O ATOM 246 CB LEU 50 -15.278 -4.166 -12.052 1.00 1.00 C ATOM 247 N LEU 51 -14.703 -5.522 -9.267 1.00 1.00 N ATOM 248 CA LEU 51 -13.877 -6.390 -8.453 1.00 1.00 C ATOM 249 C LEU 51 -13.527 -7.655 -9.225 1.00 1.00 C ATOM 250 O LEU 51 -14.217 -8.014 -10.177 1.00 1.00 O ATOM 251 CB LEU 51 -14.635 -6.767 -7.184 1.00 1.00 C ATOM 252 N LEU 52 -12.452 -8.329 -8.812 1.00 1.00 N ATOM 253 CA LEU 52 -12.015 -9.548 -9.464 1.00 1.00 C ATOM 254 C LEU 52 -12.177 -10.732 -8.520 1.00 1.00 C ATOM 255 O LEU 52 -12.089 -10.576 -7.305 1.00 1.00 O ATOM 256 CB LEU 52 -10.548 -9.411 -9.857 1.00 1.00 C ATOM 257 N GLY 53 -12.416 -11.917 -9.086 1.00 1.00 N ATOM 258 CA GLY 53 -12.590 -13.121 -8.297 1.00 1.00 C ATOM 259 C GLY 53 -11.429 -14.075 -8.537 1.00 1.00 C ATOM 260 O GLY 53 -10.638 -13.875 -9.456 1.00 1.00 O ATOM 261 N VAL 54 -11.328 -15.116 -7.707 1.00 1.00 N ATOM 262 CA VAL 54 -10.268 -16.096 -7.830 1.00 1.00 C ATOM 263 C VAL 54 -10.859 -17.490 -7.979 1.00 1.00 C ATOM 264 O VAL 54 -11.658 -17.919 -7.150 1.00 1.00 O ATOM 265 CB VAL 54 -9.389 -16.049 -6.585 1.00 1.00 C ATOM 266 N ASP 55 -10.465 -18.197 -9.041 1.00 1.00 N ATOM 267 CA ASP 55 -10.955 -19.537 -9.296 1.00 1.00 C ATOM 268 C ASP 55 -9.800 -20.451 -9.684 1.00 1.00 C ATOM 269 O ASP 55 -9.748 -20.941 -10.809 1.00 1.00 O ATOM 270 CB ASP 55 -11.969 -19.496 -10.433 1.00 1.00 C ATOM 271 N TRP 56 -8.876 -20.677 -8.749 1.00 1.00 N ATOM 272 CA TRP 56 -7.729 -21.527 -8.995 1.00 1.00 C ATOM 273 C TRP 56 -8.045 -22.961 -8.589 1.00 1.00 C ATOM 274 O TRP 56 -8.285 -23.236 -7.415 1.00 1.00 O ATOM 275 CB TRP 56 -6.543 -21.023 -8.181 1.00 1.00 C ATOM 276 N ALA 57 -8.042 -23.873 -9.562 1.00 1.00 N ATOM 277 CA ALA 57 -8.326 -25.270 -9.305 1.00 1.00 C ATOM 278 C ALA 57 -7.029 -26.066 -9.253 1.00 1.00 C ATOM 279 O ALA 57 -6.081 -25.757 -9.971 1.00 1.00 O ATOM 280 CB ALA 57 -9.212 -25.821 -10.417 1.00 1.00 C ATOM 281 N ILE 58 -6.991 -27.091 -8.400 1.00 1.00 N ATOM 282 CA ILE 58 -5.815 -27.926 -8.258 1.00 1.00 C ATOM 283 C ILE 58 -5.906 -29.123 -9.195 1.00 1.00 C ATOM 284 O ILE 58 -6.998 -29.527 -9.583 1.00 1.00 O ATOM 285 CB ILE 58 -5.714 -28.417 -6.818 1.00 1.00 C ATOM 286 N ASN 59 -4.751 -29.687 -9.556 1.00 1.00 N ATOM 287 CA ASN 59 -4.703 -30.830 -10.444 1.00 1.00 C ATOM 288 C ASN 59 -5.252 -32.063 -9.738 1.00 1.00 C ATOM 289 O ASN 59 -5.723 -31.974 -8.608 1.00 1.00 O ATOM 290 CB ASN 59 -3.259 -31.089 -10.858 1.00 1.00 C ATOM 291 N ASP 60 -5.189 -33.214 -10.412 1.00 1.00 N ATOM 292 CA ASP 60 -5.678 -34.457 -9.850 1.00 1.00 C ATOM 293 C ASP 60 -5.178 -34.618 -8.420 1.00 1.00 C ATOM 294 O ASP 60 -5.950 -34.956 -7.526 1.00 1.00 O ATOM 295 CB ASP 60 -5.179 -35.626 -10.694 1.00 1.00 C ATOM 296 N LYS 61 -3.883 -34.373 -8.209 1.00 1.00 N ATOM 297 CA LYS 61 -3.286 -34.491 -6.894 1.00 1.00 C ATOM 298 C LYS 61 -3.686 -33.302 -6.031 1.00 1.00 C ATOM 299 O LYS 61 -3.319 -33.234 -4.859 1.00 1.00 O ATOM 300 CB LYS 61 -1.768 -34.526 -7.031 1.00 1.00 C ATOM 301 N GLY 62 -4.437 -32.366 -6.612 1.00 1.00 N ATOM 302 CA GLY 62 -4.881 -31.187 -5.898 1.00 1.00 C ATOM 303 C GLY 62 -3.700 -30.270 -5.617 1.00 1.00 C ATOM 304 O GLY 62 -3.867 -29.203 -5.028 1.00 1.00 O ATOM 305 N ASP 63 -2.505 -30.690 -6.038 1.00 1.00 N ATOM 306 CA ASP 63 -1.303 -29.907 -5.830 1.00 1.00 C ATOM 307 C ASP 63 -1.136 -28.898 -6.957 1.00 1.00 C ATOM 308 O ASP 63 -0.798 -29.268 -8.079 1.00 1.00 O ATOM 309 CB ASP 63 -0.095 -30.837 -5.802 1.00 1.00 C ATOM 310 N THR 64 -1.374 -27.619 -6.654 1.00 1.00 N ATOM 311 CA THR 64 -1.250 -26.562 -7.639 1.00 1.00 C ATOM 312 C THR 64 -0.030 -25.706 -7.334 1.00 1.00 C ATOM 313 O THR 64 0.466 -25.707 -6.209 1.00 1.00 O ATOM 314 CB THR 64 -2.501 -25.692 -7.607 1.00 1.00 C ATOM 315 N VAL 65 0.453 -24.973 -8.340 1.00 1.00 N ATOM 316 CA VAL 65 1.609 -24.116 -8.177 1.00 1.00 C ATOM 317 C VAL 65 1.167 -22.694 -7.859 1.00 1.00 C ATOM 318 O VAL 65 0.496 -22.056 -8.666 1.00 1.00 O ATOM 319 CB VAL 65 2.423 -24.114 -9.468 1.00 1.00 C ATOM 320 N TYR 66 1.545 -22.201 -6.677 1.00 1.00 N ATOM 321 CA TYR 66 1.187 -20.863 -6.255 1.00 1.00 C ATOM 322 C TYR 66 2.441 -20.023 -6.061 1.00 1.00 C ATOM 323 O TYR 66 3.531 -20.564 -5.881 1.00 1.00 O ATOM 324 CB TYR 66 0.418 -20.933 -4.941 1.00 1.00 C ATOM 325 N ARG 67 2.285 -18.699 -6.096 1.00 1.00 N ATOM 326 CA ARG 67 3.403 -17.791 -5.924 1.00 1.00 C ATOM 327 C ARG 67 3.050 -16.716 -4.905 1.00 1.00 C ATOM 328 O ARG 67 1.900 -16.290 -4.823 1.00 1.00 O ATOM 329 CB ARG 67 3.732 -17.133 -7.260 1.00 1.00 C ATOM 330 N PRO 68 4.045 -16.279 -4.130 1.00 1.00 N ATOM 331 CA PRO 68 3.838 -15.258 -3.122 1.00 1.00 C ATOM 332 C PRO 68 4.998 -14.273 -3.131 1.00 1.00 C ATOM 333 O PRO 68 5.951 -14.428 -2.370 1.00 1.00 O ATOM 334 CB PRO 68 3.745 -15.916 -1.749 1.00 1.00 C ATOM 335 N VAL 69 4.916 -13.260 -3.996 1.00 1.00 N ATOM 336 CA VAL 69 5.956 -12.258 -4.101 1.00 1.00 C ATOM 337 C VAL 69 5.398 -10.886 -3.751 1.00 1.00 C ATOM 338 O VAL 69 4.219 -10.619 -3.971 1.00 1.00 O ATOM 339 CB VAL 69 6.492 -12.234 -5.529 1.00 1.00 C ATOM 340 N GLY 70 6.249 -10.017 -3.203 1.00 1.00 N ATOM 341 CA GLY 70 5.842 -8.678 -2.825 1.00 1.00 C ATOM 342 C GLY 70 5.371 -8.663 -1.379 1.00 1.00 C ATOM 343 O GLY 70 4.757 -7.696 -0.933 1.00 1.00 O ATOM 344 N LEU 71 5.658 -9.742 -0.646 1.00 1.00 N ATOM 345 CA LEU 71 5.264 -9.851 0.744 1.00 1.00 C ATOM 346 C LEU 71 5.964 -8.781 1.571 1.00 1.00 C ATOM 347 O LEU 71 5.441 -7.681 1.734 1.00 1.00 O ATOM 348 CB LEU 71 5.647 -11.230 1.272 1.00 1.00 C ATOM 349 N PRO 72 7.148 -9.107 2.092 1.00 1.00 N ATOM 350 CA PRO 72 7.913 -8.177 2.897 1.00 1.00 C ATOM 351 C PRO 72 9.402 -8.424 2.710 1.00 1.00 C ATOM 352 O PRO 72 9.829 -9.566 2.552 1.00 1.00 O ATOM 353 CB PRO 72 7.551 -8.367 4.367 1.00 1.00 C ATOM 354 N ASP 73 10.193 -7.348 2.727 1.00 1.00 N ATOM 355 CA ASP 73 11.630 -7.452 2.561 1.00 1.00 C ATOM 356 C ASP 73 12.329 -7.235 3.895 1.00 1.00 C ATOM 357 O ASP 73 12.038 -6.271 4.600 1.00 1.00 O ATOM 358 CB ASP 73 12.099 -6.397 1.566 1.00 1.00 C ATOM 359 N PRO 74 13.252 -8.136 4.240 1.00 1.00 N ATOM 360 CA PRO 74 13.987 -8.040 5.484 1.00 1.00 C ATOM 361 C PRO 74 14.240 -6.580 5.831 1.00 1.00 C ATOM 362 O PRO 74 13.753 -6.090 6.849 1.00 1.00 O ATOM 363 CB PRO 74 15.322 -8.764 5.341 1.00 1.00 C ATOM 364 N ASP 75 15.002 -5.888 4.983 1.00 1.00 N ATOM 365 CA ASP 75 15.316 -4.490 5.202 1.00 1.00 C ATOM 366 C ASP 75 14.045 -3.654 5.154 1.00 1.00 C ATOM 367 O ASP 75 13.915 -2.676 5.886 1.00 1.00 O ATOM 368 CB ASP 75 16.277 -4.012 4.120 1.00 1.00 C ATOM 369 N LYS 76 13.107 -4.044 4.289 1.00 1.00 N ATOM 370 CA LYS 76 11.852 -3.331 4.147 1.00 1.00 C ATOM 371 C LYS 76 10.941 -3.640 5.327 1.00 1.00 C ATOM 372 O LYS 76 10.348 -2.733 5.908 1.00 1.00 O ATOM 373 CB LYS 76 11.169 -3.763 2.854 1.00 1.00 C ATOM 374 N VAL 77 10.831 -4.923 5.679 1.00 1.00 N ATOM 375 CA VAL 77 9.994 -5.345 6.784 1.00 1.00 C ATOM 376 C VAL 77 10.446 -4.668 8.070 1.00 1.00 C ATOM 377 O VAL 77 9.671 -3.954 8.702 1.00 1.00 O ATOM 378 CB VAL 77 10.096 -6.857 6.946 1.00 1.00 C ATOM 379 N GLN 78 11.704 -4.892 8.454 1.00 1.00 N ATOM 380 CA GLN 78 12.254 -4.305 9.659 1.00 1.00 C ATOM 381 C GLN 78 12.317 -2.791 9.521 1.00 1.00 C ATOM 382 O GLN 78 12.020 -2.068 10.470 1.00 1.00 O ATOM 383 CB GLN 78 13.658 -4.852 9.894 1.00 1.00 C ATOM 384 N ARG 79 12.705 -2.315 8.337 1.00 1.00 N ATOM 385 CA ARG 79 12.806 -0.893 8.080 1.00 1.00 C ATOM 386 C ARG 79 11.502 -0.200 8.450 1.00 1.00 C ATOM 387 O ARG 79 11.468 1.018 8.610 1.00 1.00 O ATOM 388 CB ARG 79 13.095 -0.665 6.600 1.00 1.00 C ATOM 389 N ASP 80 10.429 -0.982 8.587 1.00 1.00 N ATOM 390 CA ASP 80 9.129 -0.443 8.938 1.00 1.00 C ATOM 391 C ASP 80 9.081 -0.120 10.424 1.00 1.00 C ATOM 392 O ASP 80 8.149 0.534 10.889 1.00 1.00 O ATOM 393 CB ASP 80 8.050 -1.469 8.608 1.00 1.00 C ATOM 394 N LEU 81 10.090 -0.579 11.169 1.00 1.00 N ATOM 395 CA LEU 81 10.159 -0.338 12.596 1.00 1.00 C ATOM 396 C LEU 81 10.733 1.044 12.866 1.00 1.00 C ATOM 397 O LEU 81 10.094 1.867 13.517 1.00 1.00 O ATOM 398 CB LEU 81 11.053 -1.392 13.244 1.00 1.00 C ATOM 399 N ALA 82 11.945 1.297 12.363 1.00 1.00 N ATOM 400 CA ALA 82 12.598 2.576 12.552 1.00 1.00 C ATOM 401 C ALA 82 12.167 3.549 11.463 1.00 1.00 C ATOM 402 O ALA 82 12.277 4.762 11.634 1.00 1.00 O ATOM 403 CB ALA 82 14.111 2.385 12.487 1.00 1.00 C ATOM 404 N SER 83 11.676 3.015 10.343 1.00 1.00 N ATOM 405 CA SER 83 11.230 3.836 9.235 1.00 1.00 C ATOM 406 C SER 83 9.899 4.492 9.572 1.00 1.00 C ATOM 407 O SER 83 9.473 5.418 8.886 1.00 1.00 O ATOM 408 CB SER 83 11.066 2.964 7.994 1.00 1.00 C ATOM 409 N GLN 84 9.244 4.007 10.630 1.00 1.00 N ATOM 410 CA GLN 84 7.968 4.547 11.053 1.00 1.00 C ATOM 411 C GLN 84 8.111 6.024 11.393 1.00 1.00 C ATOM 412 O GLN 84 7.400 6.862 10.842 1.00 1.00 O ATOM 413 CB GLN 84 7.483 3.790 12.284 1.00 1.00 C ATOM 414 N CYS 85 9.033 6.340 12.306 1.00 1.00 N ATOM 415 CA CYS 85 9.265 7.709 12.718 1.00 1.00 C ATOM 416 C CYS 85 9.386 8.610 11.496 1.00 1.00 C ATOM 417 O CYS 85 8.914 9.744 11.509 1.00 1.00 O ATOM 418 CB CYS 85 10.554 7.783 13.529 1.00 1.00 C ATOM 419 N ALA 86 10.021 8.099 10.439 1.00 1.00 N ATOM 420 CA ALA 86 10.202 8.855 9.215 1.00 1.00 C ATOM 421 C ALA 86 8.882 8.962 8.467 1.00 1.00 C ATOM 422 O ALA 86 8.460 10.058 8.101 1.00 1.00 O ATOM 423 CB ALA 86 11.228 8.150 8.332 1.00 1.00 C ATOM 424 N SER 87 8.228 7.820 8.239 1.00 1.00 N ATOM 425 CA SER 87 6.961 7.788 7.538 1.00 1.00 C ATOM 426 C SER 87 5.863 8.372 8.415 1.00 1.00 C ATOM 427 O SER 87 4.841 8.831 7.910 1.00 1.00 O ATOM 428 CB SER 87 6.613 6.346 7.187 1.00 1.00 C ATOM 429 N MET 88 6.077 8.352 9.733 1.00 1.00 N ATOM 430 CA MET 88 5.107 8.877 10.673 1.00 1.00 C ATOM 431 C MET 88 5.019 10.391 10.543 1.00 1.00 C ATOM 432 O MET 88 3.960 10.927 10.223 1.00 1.00 O ATOM 433 CB MET 88 5.534 8.517 12.092 1.00 1.00 C ATOM 434 N LEU 89 6.136 11.080 10.791 1.00 1.00 N ATOM 435 CA LEU 89 6.180 12.525 10.701 1.00 1.00 C ATOM 436 C LEU 89 5.393 12.997 9.488 1.00 1.00 C ATOM 437 O LEU 89 4.953 14.145 9.440 1.00 1.00 O ATOM 438 CB LEU 89 7.630 12.980 10.571 1.00 1.00 C ATOM 439 N ASN 90 5.215 12.110 8.507 1.00 1.00 N ATOM 440 CA ASN 90 4.484 12.437 7.301 1.00 1.00 C ATOM 441 C ASN 90 2.989 12.254 7.528 1.00 1.00 C ATOM 442 O ASN 90 2.181 12.624 6.681 1.00 1.00 O ATOM 443 CB ASN 90 4.938 11.522 6.168 1.00 1.00 C ATOM 444 N VAL 91 2.626 11.681 8.679 1.00 1.00 N ATOM 445 CA VAL 91 1.236 11.451 9.013 1.00 1.00 C ATOM 446 C VAL 91 0.508 12.780 9.163 1.00 1.00 C ATOM 447 O VAL 91 -0.700 12.854 8.950 1.00 1.00 O ATOM 448 CB VAL 91 1.155 10.681 10.328 1.00 1.00 C ATOM 449 N ALA 92 1.247 13.828 9.532 1.00 1.00 N ATOM 450 CA ALA 92 0.672 15.147 9.707 1.00 1.00 C ATOM 451 C ALA 92 -0.452 15.366 8.705 1.00 1.00 C ATOM 452 O ALA 92 -1.561 15.740 9.083 1.00 1.00 O ATOM 453 CB ALA 92 1.751 16.203 9.496 1.00 1.00 C ATOM 454 N LEU 93 -0.164 15.130 7.423 1.00 1.00 N ATOM 455 CA LEU 93 -1.146 15.301 6.372 1.00 1.00 C ATOM 456 C LEU 93 -2.414 14.532 6.713 1.00 1.00 C ATOM 457 O LEU 93 -3.514 15.074 6.620 1.00 1.00 O ATOM 458 CB LEU 93 -0.578 14.778 5.058 1.00 1.00 C ATOM 459 N ARG 94 -2.259 13.267 7.108 1.00 1.00 N ATOM 460 CA ARG 94 -3.388 12.430 7.459 1.00 1.00 C ATOM 461 C ARG 94 -3.700 12.569 8.943 1.00 1.00 C ATOM 462 O ARG 94 -4.805 12.960 9.312 1.00 1.00 O ATOM 463 CB ARG 94 -3.056 10.975 7.146 1.00 1.00 C ATOM 464 N PRO 95 -2.721 12.244 9.792 1.00 1.00 N ATOM 465 CA PRO 95 -2.893 12.334 11.228 1.00 1.00 C ATOM 466 C PRO 95 -3.279 13.753 11.621 1.00 1.00 C ATOM 467 O PRO 95 -3.787 13.977 12.718 1.00 1.00 O ATOM 468 CB PRO 95 -1.588 11.955 11.919 1.00 1.00 C ATOM 469 N GLU 96 -3.035 14.710 10.723 1.00 1.00 N ATOM 470 CA GLU 96 -3.355 16.099 10.978 1.00 1.00 C ATOM 471 C GLU 96 -4.843 16.249 11.266 1.00 1.00 C ATOM 472 O GLU 96 -5.315 17.348 11.546 1.00 1.00 O ATOM 473 CB GLU 96 -2.990 16.935 9.755 1.00 1.00 C ATOM 474 N MET 97 -5.579 15.138 11.197 1.00 1.00 N ATOM 475 CA MET 97 -7.005 15.148 11.451 1.00 1.00 C ATOM 476 C MET 97 -7.271 15.217 12.949 1.00 1.00 C ATOM 477 O MET 97 -8.138 15.966 13.392 1.00 1.00 O ATOM 478 CB MET 97 -7.628 13.875 10.886 1.00 1.00 C ATOM 479 N GLN 98 -6.520 14.435 13.727 1.00 1.00 N ATOM 480 CA GLN 98 -6.675 14.410 15.167 1.00 1.00 C ATOM 481 C GLN 98 -6.711 15.830 15.713 1.00 1.00 C ATOM 482 O GLN 98 -6.819 16.029 16.921 1.00 1.00 O ATOM 483 CB GLN 98 -5.502 13.659 15.788 1.00 1.00 C ATOM 484 N LEU 99 -6.620 16.817 14.818 1.00 1.00 N ATOM 485 CA LEU 99 -6.643 18.212 15.212 1.00 1.00 C ATOM 486 C LEU 99 -8.070 18.648 15.508 1.00 1.00 C ATOM 487 O LEU 99 -8.289 19.704 16.097 1.00 1.00 O ATOM 488 CB LEU 99 -6.076 19.065 14.084 1.00 1.00 C ATOM 489 N GLU 100 -9.044 17.832 15.095 1.00 1.00 N ATOM 490 CA GLU 100 -10.443 18.135 15.316 1.00 1.00 C ATOM 491 C GLU 100 -11.040 17.155 16.316 1.00 1.00 C ATOM 492 O GLU 100 -11.389 17.539 17.430 1.00 1.00 O ATOM 493 CB GLU 100 -11.197 18.031 13.994 1.00 1.00 C ATOM 494 N GLN 101 -11.155 15.888 15.914 1.00 1.00 N ATOM 495 CA GLN 101 -11.708 14.860 16.773 1.00 1.00 C ATOM 496 C GLN 101 -10.965 14.833 18.101 1.00 1.00 C ATOM 497 O GLN 101 -11.587 14.838 19.162 1.00 1.00 O ATOM 498 CB GLN 101 -11.572 13.503 16.091 1.00 1.00 C ATOM 499 N VAL 102 -9.632 14.805 18.040 1.00 1.00 N ATOM 500 CA VAL 102 -8.811 14.778 19.233 1.00 1.00 C ATOM 501 C VAL 102 -8.809 16.148 19.898 1.00 1.00 C ATOM 502 O VAL 102 -8.716 16.246 21.119 1.00 1.00 O ATOM 503 CB VAL 102 -7.383 14.397 18.856 1.00 1.00 C ATOM 504 N GLY 103 -8.911 17.205 19.088 1.00 1.00 N ATOM 505 CA GLY 103 -8.920 18.561 19.600 1.00 1.00 C ATOM 506 C GLY 103 -7.514 18.983 19.993 1.00 1.00 C ATOM 507 O GLY 103 -7.284 19.407 21.123 1.00 1.00 O ATOM 508 N GLY 104 -6.570 18.864 19.057 1.00 1.00 N ATOM 509 CA GLY 104 -5.190 19.231 19.307 1.00 1.00 C ATOM 510 C GLY 104 -4.366 17.990 19.615 1.00 1.00 C ATOM 511 O GLY 104 -3.141 18.014 19.509 1.00 1.00 O ATOM 512 N LYS 105 -5.041 16.904 19.997 1.00 1.00 N ATOM 513 CA LYS 105 -4.372 15.659 20.318 1.00 1.00 C ATOM 514 C LYS 105 -4.663 14.617 19.247 1.00 1.00 C ATOM 515 O LYS 105 -5.723 14.642 18.627 1.00 1.00 O ATOM 516 CB LYS 105 -4.867 15.151 21.667 1.00 1.00 C ATOM 517 N THR 106 -3.715 13.701 19.033 1.00 1.00 N ATOM 518 CA THR 106 -3.872 12.657 18.042 1.00 1.00 C ATOM 519 C THR 106 -4.180 11.330 18.722 1.00 1.00 C ATOM 520 O THR 106 -3.678 11.058 19.809 1.00 1.00 O ATOM 521 CB THR 106 -2.582 12.523 17.238 1.00 1.00 C ATOM 522 N LEU 107 -5.008 10.505 18.077 1.00 1.00 N ATOM 523 CA LEU 107 -5.381 9.215 18.618 1.00 1.00 C ATOM 524 C LEU 107 -4.618 8.108 17.903 1.00 1.00 C ATOM 525 O LEU 107 -4.071 8.326 16.824 1.00 1.00 O ATOM 526 CB LEU 107 -6.878 8.998 18.424 1.00 1.00 C ATOM 527 N LEU 108 -4.582 6.919 18.509 1.00 1.00 N ATOM 528 CA LEU 108 -3.888 5.785 17.931 1.00 1.00 C ATOM 529 C LEU 108 -4.873 4.892 17.190 1.00 1.00 C ATOM 530 O LEU 108 -6.048 4.837 17.540 1.00 1.00 O ATOM 531 CB LEU 108 -3.214 4.985 19.040 1.00 1.00 C ATOM 532 N VAL 109 -4.387 4.192 16.160 1.00 1.00 N ATOM 533 CA VAL 109 -5.222 3.307 15.375 1.00 1.00 C ATOM 534 C VAL 109 -4.478 2.013 15.075 1.00 1.00 C ATOM 535 O VAL 109 -3.262 2.022 14.901 1.00 1.00 O ATOM 536 CB VAL 109 -5.593 3.993 14.064 1.00 1.00 C ATOM 537 N VAL 110 -5.214 0.902 15.016 1.00 1.00 N ATOM 538 CA VAL 110 -4.624 -0.392 14.737 1.00 1.00 C ATOM 539 C VAL 110 -4.734 -0.709 13.252 1.00 1.00 C ATOM 540 O VAL 110 -5.780 -0.490 12.645 1.00 1.00 O ATOM 541 CB VAL 110 -5.355 -1.465 15.539 1.00 1.00 C ATOM 542 N TYR 111 -3.650 -1.227 12.669 1.00 1.00 N ATOM 543 CA TYR 111 -3.628 -1.571 11.263 1.00 1.00 C ATOM 544 C TYR 111 -2.784 -2.820 11.044 1.00 1.00 C ATOM 545 O TYR 111 -1.676 -2.921 11.567 1.00 1.00 O ATOM 546 CB TYR 111 -3.032 -0.414 10.467 1.00 1.00 C ATOM 547 N VAL 112 -3.312 -3.768 10.267 1.00 1.00 N ATOM 548 CA VAL 112 -2.608 -5.003 9.981 1.00 1.00 C ATOM 549 C VAL 112 -1.819 -4.867 8.686 1.00 1.00 C ATOM 550 O VAL 112 -2.245 -4.166 7.770 1.00 1.00 O ATOM 551 CB VAL 112 -3.616 -6.138 9.840 1.00 1.00 C ATOM 552 N PRO 113 -0.670 -5.542 8.611 1.00 1.00 N ATOM 553 CA PRO 113 0.171 -5.496 7.433 1.00 1.00 C ATOM 554 C PRO 113 -0.649 -5.823 6.193 1.00 1.00 C ATOM 555 O PRO 113 -1.759 -6.342 6.300 1.00 1.00 O ATOM 556 CB PRO 113 1.299 -6.510 7.576 1.00 1.00 C ATOM 557 N GLU 114 -0.099 -5.521 5.015 1.00 1.00 N ATOM 558 CA GLU 114 -0.778 -5.783 3.762 1.00 1.00 C ATOM 559 C GLU 114 -1.300 -7.212 3.740 1.00 1.00 C ATOM 560 O GLU 114 -2.264 -7.510 3.038 1.00 1.00 O ATOM 561 CB GLU 114 0.196 -5.582 2.606 1.00 1.00 C ATOM 562 N ALA 115 -0.660 -8.095 4.509 1.00 1.00 N ATOM 563 CA ALA 115 -1.060 -9.485 4.574 1.00 1.00 C ATOM 564 C ALA 115 -2.147 -9.668 5.624 1.00 1.00 C ATOM 565 O ALA 115 -2.846 -10.679 5.626 1.00 1.00 O ATOM 566 CB ALA 115 0.147 -10.342 4.941 1.00 1.00 C ATOM 567 N ASP 116 -2.286 -8.686 6.517 1.00 1.00 N ATOM 568 CA ASP 116 -3.285 -8.740 7.565 1.00 1.00 C ATOM 569 C ASP 116 -4.681 -8.684 6.962 1.00 1.00 C ATOM 570 O ASP 116 -5.574 -9.411 7.391 1.00 1.00 O ATOM 571 CB ASP 116 -3.093 -7.558 8.508 1.00 1.00 C ATOM 572 N VAL 117 -4.866 -7.817 5.963 1.00 1.00 N ATOM 573 CA VAL 117 -6.149 -7.669 5.306 1.00 1.00 C ATOM 574 C VAL 117 -6.672 -9.029 4.866 1.00 1.00 C ATOM 575 O VAL 117 -7.868 -9.293 4.957 1.00 1.00 O ATOM 576 CB VAL 117 -5.987 -6.772 4.084 1.00 1.00 C ATOM 577 N THR 118 -5.771 -9.891 4.389 1.00 1.00 N ATOM 578 CA THR 118 -6.143 -11.216 3.939 1.00 1.00 C ATOM 579 C THR 118 -6.620 -12.054 5.116 1.00 1.00 C ATOM 580 O THR 118 -7.561 -12.834 4.984 1.00 1.00 O ATOM 581 CB THR 118 -4.936 -11.889 3.296 1.00 1.00 C ATOM 582 N HIS 119 -5.967 -11.891 6.270 1.00 1.00 N ATOM 583 CA HIS 119 -6.326 -12.630 7.463 1.00 1.00 C ATOM 584 C HIS 119 -7.022 -11.711 8.459 1.00 1.00 C ATOM 585 O HIS 119 -7.791 -12.171 9.297 1.00 1.00 O ATOM 586 CB HIS 119 -5.065 -13.205 8.100 1.00 1.00 C ATOM 587 N LYS 120 -6.746 -10.408 8.362 1.00 1.00 N ATOM 588 CA LYS 120 -7.343 -9.431 9.250 1.00 1.00 C ATOM 589 C LYS 120 -8.223 -8.475 8.460 1.00 1.00 C ATOM 590 O LYS 120 -7.811 -7.964 7.422 1.00 1.00 O ATOM 591 CB LYS 120 -6.240 -8.645 9.951 1.00 1.00 C ATOM 592 N PRO 121 -9.440 -8.236 8.954 1.00 1.00 N ATOM 593 CA PRO 121 -10.373 -7.344 8.295 1.00 1.00 C ATOM 594 C PRO 121 -9.692 -6.022 7.971 1.00 1.00 C ATOM 595 O PRO 121 -8.741 -5.632 8.645 1.00 1.00 O ATOM 596 CB PRO 121 -11.563 -7.089 9.214 1.00 1.00 C ATOM 597 N ILE 122 -10.183 -5.334 6.938 1.00 1.00 N ATOM 598 CA ILE 122 -9.622 -4.062 6.528 1.00 1.00 C ATOM 599 C ILE 122 -9.144 -3.287 7.747 1.00 1.00 C ATOM 600 O ILE 122 -9.936 -2.969 8.632 1.00 1.00 O ATOM 601 CB ILE 122 -10.686 -3.252 5.799 1.00 1.00 C ATOM 602 N TYR 123 -7.844 -2.983 7.791 1.00 1.00 N ATOM 603 CA TYR 123 -7.267 -2.248 8.897 1.00 1.00 C ATOM 604 C TYR 123 -7.108 -0.781 8.525 1.00 1.00 C ATOM 605 O TYR 123 -6.843 0.054 9.387 1.00 1.00 O ATOM 606 CB TYR 123 -5.900 -2.834 9.236 1.00 1.00 C ATOM 607 N LYS 124 -7.270 -0.470 7.237 1.00 1.00 N ATOM 608 CA LYS 124 -7.146 0.891 6.757 1.00 1.00 C ATOM 609 C LYS 124 -8.279 1.746 7.304 1.00 1.00 C ATOM 610 O LYS 124 -8.041 2.826 7.842 1.00 1.00 O ATOM 611 CB LYS 124 -7.198 0.896 5.233 1.00 1.00 C ATOM 612 N LYS 125 -9.514 1.260 7.165 1.00 1.00 N ATOM 613 CA LYS 125 -10.678 1.977 7.644 1.00 1.00 C ATOM 614 C LYS 125 -10.885 1.709 9.129 1.00 1.00 C ATOM 615 O LYS 125 -10.901 2.638 9.933 1.00 1.00 O ATOM 616 CB LYS 125 -11.910 1.520 6.871 1.00 1.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 591 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 69.69 59.6 228 97.0 235 ARMSMC SECONDARY STRUCTURE . . 64.39 62.9 140 100.0 140 ARMSMC SURFACE . . . . . . . . 70.69 57.7 142 96.6 147 ARMSMC BURIED . . . . . . . . 68.00 62.8 86 97.7 88 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 84 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 75 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 50 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 56 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 52 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 38 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 29 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 34 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 14 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 6 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 17.02 (Number of atoms: 120) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 17.02 120 100.0 120 CRMSCA CRN = ALL/NP . . . . . 0.1418 CRMSCA SECONDARY STRUCTURE . . 14.82 70 100.0 70 CRMSCA SURFACE . . . . . . . . 18.01 76 100.0 76 CRMSCA BURIED . . . . . . . . 15.16 44 100.0 44 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 17.02 591 100.0 591 CRMSMC SECONDARY STRUCTURE . . 14.95 349 100.0 349 CRMSMC SURFACE . . . . . . . . 17.98 376 100.0 376 CRMSMC BURIED . . . . . . . . 15.19 215 100.0 215 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 16.84 111 8.1 1374 CRMSSC RELIABLE SIDE CHAINS . 16.84 111 8.5 1302 CRMSSC SECONDARY STRUCTURE . . 15.09 69 8.2 841 CRMSSC SURFACE . . . . . . . . 17.61 72 8.4 862 CRMSSC BURIED . . . . . . . . 15.31 39 7.6 512 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 17.02 591 31.9 1854 CRMSALL SECONDARY STRUCTURE . . 14.95 349 31.1 1121 CRMSALL SURFACE . . . . . . . . 17.98 376 32.2 1166 CRMSALL BURIED . . . . . . . . 15.19 215 31.2 688 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.201 0.842 0.421 120 100.0 120 ERRCA SECONDARY STRUCTURE . . 12.694 0.842 0.421 70 100.0 70 ERRCA SURFACE . . . . . . . . 14.965 0.846 0.423 76 100.0 76 ERRCA BURIED . . . . . . . . 12.881 0.837 0.418 44 100.0 44 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.212 0.843 0.421 591 100.0 591 ERRMC SECONDARY STRUCTURE . . 12.787 0.843 0.421 349 100.0 349 ERRMC SURFACE . . . . . . . . 14.984 0.848 0.424 376 100.0 376 ERRMC BURIED . . . . . . . . 12.861 0.834 0.417 215 100.0 215 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.194 0.845 0.423 111 8.1 1374 ERRSC RELIABLE SIDE CHAINS . 14.194 0.845 0.423 111 8.5 1302 ERRSC SECONDARY STRUCTURE . . 12.992 0.844 0.422 69 8.2 841 ERRSC SURFACE . . . . . . . . 14.793 0.847 0.423 72 8.4 862 ERRSC BURIED . . . . . . . . 13.087 0.842 0.421 39 7.6 512 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.212 0.843 0.421 591 31.9 1854 ERRALL SECONDARY STRUCTURE . . 12.787 0.843 0.421 349 31.1 1121 ERRALL SURFACE . . . . . . . . 14.984 0.848 0.424 376 32.2 1166 ERRALL BURIED . . . . . . . . 12.861 0.834 0.417 215 31.2 688 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 2 4 31 120 120 DISTCA CA (P) 0.00 0.83 1.67 3.33 25.83 120 DISTCA CA (RMS) 0.00 1.73 2.28 3.25 7.40 DISTCA ALL (N) 0 2 7 26 152 591 1854 DISTALL ALL (P) 0.00 0.11 0.38 1.40 8.20 1854 DISTALL ALL (RMS) 0.00 1.48 2.31 3.77 7.33 DISTALL END of the results output