####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 110 ( 440), selected 110 , name T0557TS328_1-D1 # Molecule2: number of CA atoms 120 ( 1854), selected 110 , name T0557-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0557TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 66 - 105 4.84 23.50 LCS_AVERAGE: 22.52 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 53 - 68 1.92 28.73 LONGEST_CONTINUOUS_SEGMENT: 16 71 - 86 1.99 23.93 LCS_AVERAGE: 8.91 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 73 - 86 0.83 24.09 LCS_AVERAGE: 5.45 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 110 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT L 11 L 11 3 3 5 3 3 3 3 4 5 5 5 9 13 14 15 21 21 22 23 25 27 37 38 LCS_GDT N 12 N 12 3 3 5 3 3 3 4 4 6 8 10 13 16 17 20 24 33 37 43 48 50 54 58 LCS_GDT A 13 A 13 3 3 10 3 3 3 3 4 5 5 10 13 16 16 18 21 24 26 29 33 44 47 57 LCS_GDT R 19 R 19 5 6 22 4 4 5 5 6 6 10 10 11 13 15 21 28 30 31 36 40 44 49 50 LCS_GDT I 20 I 20 5 6 22 4 4 5 7 8 9 10 11 12 14 17 21 27 31 36 41 43 47 50 51 LCS_GDT E 21 E 21 5 6 22 4 4 5 5 6 9 10 11 14 16 21 26 27 33 36 41 43 47 49 51 LCS_GDT A 22 A 22 5 6 22 4 4 5 5 6 9 11 13 15 17 19 21 21 23 32 35 41 43 47 50 LCS_GDT K 23 K 23 5 6 22 3 4 5 5 6 6 7 9 10 12 15 17 20 22 24 25 30 30 31 33 LCS_GDT R 24 R 24 4 6 22 3 4 4 5 6 10 13 14 17 18 19 21 21 22 24 25 27 28 32 35 LCS_GDT A 25 A 25 4 6 22 3 4 6 8 11 12 13 14 17 18 19 21 21 22 24 25 27 28 33 35 LCS_GDT S 26 S 26 4 12 22 3 4 4 9 10 12 13 14 17 18 19 21 21 22 24 25 27 28 32 35 LCS_GDT D 27 D 27 4 12 22 3 5 6 9 10 11 12 14 17 18 21 23 25 29 34 36 42 45 46 51 LCS_GDT M 28 M 28 5 12 22 3 4 7 9 11 12 13 14 17 18 19 21 24 27 29 35 36 38 39 41 LCS_GDT G 29 G 29 5 12 22 4 5 7 9 11 12 13 14 17 18 19 21 21 27 34 35 36 39 45 46 LCS_GDT K 30 K 30 6 12 22 4 5 7 9 11 12 13 14 17 18 19 21 31 33 34 38 42 45 49 51 LCS_GDT S 31 S 31 6 12 22 4 5 7 9 11 12 13 14 17 18 21 23 30 37 39 41 43 47 49 51 LCS_GDT V 32 V 32 6 12 22 4 5 7 9 11 12 13 14 17 22 24 28 35 39 42 47 50 53 56 60 LCS_GDT M 33 M 33 6 12 22 4 5 7 9 11 12 13 14 17 23 28 32 36 40 50 51 56 57 59 60 LCS_GDT E 34 E 34 6 12 22 4 5 7 9 11 12 13 18 21 26 32 37 42 47 50 52 56 57 59 60 LCS_GDT T 35 T 35 6 12 22 4 5 7 9 11 12 13 14 17 18 26 31 32 40 46 52 56 57 59 60 LCS_GDT V 36 V 36 6 12 22 4 5 10 11 16 20 22 24 33 34 39 42 45 47 50 52 56 57 59 60 LCS_GDT I 37 I 37 6 12 22 4 4 11 12 15 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT A 38 A 38 4 5 22 3 4 5 5 14 17 20 27 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT F 39 F 39 4 5 22 3 4 5 5 14 17 21 27 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT A 40 A 40 3 7 22 0 4 8 9 12 18 21 24 29 30 39 42 44 46 50 51 54 56 59 59 LCS_GDT N 41 N 41 3 7 20 0 3 4 7 7 19 22 25 29 33 39 42 45 47 50 52 56 57 59 60 LCS_GDT E 42 E 42 3 7 20 3 6 12 13 15 19 22 27 31 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT P 43 P 43 3 7 20 3 3 4 7 7 7 13 15 23 27 35 40 45 47 50 52 56 57 59 60 LCS_GDT G 44 G 44 3 7 20 3 3 5 7 8 19 20 25 29 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT L 45 L 45 3 7 20 3 4 5 9 14 19 22 25 31 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT D 46 D 46 3 7 20 3 4 5 7 7 9 21 24 29 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT G 47 G 47 5 7 20 4 5 13 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT G 48 G 48 5 7 20 4 5 6 9 17 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT Y 49 Y 49 5 7 20 4 6 10 11 16 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT L 50 L 50 5 7 21 4 5 10 11 16 20 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT L 51 L 51 5 7 21 4 5 5 6 12 18 21 24 24 26 36 38 45 47 50 52 56 57 59 60 LCS_GDT L 52 L 52 4 7 21 3 4 8 14 15 20 24 27 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT G 53 G 53 4 16 22 3 4 4 5 14 20 22 27 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT V 54 V 54 4 16 22 3 4 6 10 13 16 16 17 19 20 20 26 36 42 50 52 56 57 59 60 LCS_GDT D 55 D 55 4 16 22 3 4 5 8 10 16 16 16 19 20 20 21 23 26 30 34 43 47 50 53 LCS_GDT W 56 W 56 10 16 22 7 8 11 12 13 16 16 17 19 20 20 21 23 26 28 36 43 47 50 51 LCS_GDT A 57 A 57 10 16 22 7 8 10 12 13 16 16 17 19 20 20 21 23 25 25 31 37 43 47 50 LCS_GDT I 58 I 58 10 16 22 3 8 11 12 13 16 16 17 19 20 20 21 23 25 25 27 30 31 32 33 LCS_GDT N 59 N 59 10 16 22 4 8 11 12 13 16 16 17 19 20 20 21 23 25 25 27 30 31 32 32 LCS_GDT D 60 D 60 10 16 22 3 7 10 12 13 16 16 17 19 20 20 21 23 25 25 27 30 31 32 32 LCS_GDT K 61 K 61 10 16 22 4 8 11 12 13 16 16 17 19 20 20 21 23 25 25 27 30 31 32 32 LCS_GDT G 62 G 62 10 16 22 4 8 11 12 13 16 16 17 19 20 20 21 23 25 25 27 30 31 32 32 LCS_GDT D 63 D 63 10 16 22 6 8 11 12 13 16 16 17 19 20 20 21 23 25 25 27 30 31 32 32 LCS_GDT T 64 T 64 10 16 22 7 8 11 12 13 16 16 17 19 20 20 21 23 25 25 27 30 31 33 38 LCS_GDT V 65 V 65 10 16 22 7 8 11 12 13 16 16 17 19 20 20 21 23 25 25 27 33 40 45 50 LCS_GDT Y 66 Y 66 10 16 40 7 8 11 12 13 16 16 17 19 20 20 21 23 26 28 35 43 47 50 52 LCS_GDT R 67 R 67 10 16 40 7 8 11 12 13 16 16 17 19 20 23 32 37 40 43 45 50 55 58 60 LCS_GDT P 68 P 68 10 16 40 7 8 11 12 13 16 16 19 30 33 38 42 45 47 50 52 56 57 59 60 LCS_GDT V 69 V 69 4 12 40 3 4 6 11 11 13 15 17 24 32 37 42 45 47 50 52 56 57 59 60 LCS_GDT G 70 G 70 4 15 40 3 4 12 14 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT L 71 L 71 4 16 40 3 4 5 11 12 19 22 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT P 72 P 72 4 16 40 3 4 4 7 11 13 21 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT D 73 D 73 14 16 40 4 10 13 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT P 74 P 74 14 16 40 4 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT D 75 D 75 14 16 40 4 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT K 76 K 76 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT V 77 V 77 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT Q 78 Q 78 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT R 79 R 79 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT D 80 D 80 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT L 81 L 81 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT A 82 A 82 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT S 83 S 83 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT Q 84 Q 84 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT C 85 C 85 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT A 86 A 86 14 16 40 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT S 87 S 87 5 15 40 3 5 9 15 17 20 22 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT M 88 M 88 5 7 40 3 5 5 7 12 18 22 25 28 31 37 40 45 47 50 52 56 57 59 60 LCS_GDT L 89 L 89 5 7 40 3 5 7 15 17 20 22 25 28 33 37 40 45 47 50 52 56 57 59 60 LCS_GDT N 90 N 90 5 7 40 3 5 5 7 8 9 12 19 26 29 32 33 37 41 42 52 56 57 59 60 LCS_GDT V 91 V 91 4 7 40 3 4 5 8 8 11 20 25 28 30 32 35 39 45 49 52 56 57 59 60 LCS_GDT A 92 A 92 3 10 40 3 3 3 7 10 18 20 25 28 30 33 37 42 45 49 52 56 57 59 60 LCS_GDT L 93 L 93 5 12 40 4 5 6 9 11 15 18 25 28 30 32 35 37 40 43 48 50 52 56 60 LCS_GDT R 94 R 94 8 12 40 4 6 8 9 14 18 22 25 28 30 33 35 39 44 46 51 55 57 59 60 LCS_GDT P 95 P 95 8 12 40 4 6 8 15 17 18 22 25 28 30 33 35 41 45 48 52 56 57 59 60 LCS_GDT E 96 E 96 8 12 40 4 6 9 15 17 20 22 25 28 30 33 35 41 45 48 52 56 57 59 60 LCS_GDT M 97 M 97 8 12 40 4 6 8 15 17 20 22 25 28 32 37 40 45 47 49 52 56 57 59 60 LCS_GDT Q 98 Q 98 8 12 40 4 6 8 9 15 19 22 25 28 35 39 42 45 47 50 52 56 57 59 60 LCS_GDT L 99 L 99 8 12 40 4 6 8 9 11 19 22 29 32 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT E 100 E 100 8 12 40 4 6 8 9 14 16 22 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT Q 101 Q 101 8 12 40 3 6 8 9 14 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT V 102 V 102 4 12 40 3 12 14 16 18 20 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT G 103 G 103 4 12 40 3 5 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT G 104 G 104 3 12 40 3 3 7 15 17 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 LCS_GDT K 105 K 105 4 8 40 3 3 5 7 7 8 8 10 11 20 27 31 35 36 49 50 54 57 59 60 LCS_GDT T 106 T 106 4 8 39 3 4 5 7 7 8 8 10 11 11 12 12 12 13 13 16 26 33 36 51 LCS_GDT L 107 L 107 4 8 14 3 4 5 7 7 8 8 10 11 11 12 12 12 13 13 14 19 21 22 27 LCS_GDT L 108 L 108 4 8 16 3 4 5 7 7 8 8 10 11 11 12 13 15 16 16 16 19 21 22 27 LCS_GDT V 109 V 109 5 8 16 3 4 5 7 7 7 8 9 11 12 14 15 15 16 16 16 19 21 22 24 LCS_GDT V 110 V 110 5 8 16 3 4 5 7 7 8 8 10 11 12 14 15 15 16 16 16 19 21 22 27 LCS_GDT Y 111 Y 111 5 8 16 3 4 5 6 7 8 8 10 11 12 14 15 15 16 16 16 19 21 22 27 LCS_GDT V 112 V 112 5 6 16 3 4 5 6 6 6 8 10 11 12 14 15 15 16 16 16 22 26 27 28 LCS_GDT P 113 P 113 5 6 16 3 4 5 6 6 7 8 10 11 12 14 15 15 16 16 16 22 26 27 28 LCS_GDT E 114 E 114 3 3 16 3 3 4 5 7 7 8 10 11 12 14 15 15 16 16 17 19 26 27 28 LCS_GDT A 115 A 115 3 7 16 3 3 4 5 7 8 8 10 11 15 20 20 22 25 25 25 25 26 27 30 LCS_GDT D 116 D 116 5 7 16 4 4 5 11 11 13 14 15 16 18 20 20 22 25 25 25 27 29 29 30 LCS_GDT V 117 V 117 5 7 16 4 4 5 6 7 11 14 15 16 18 20 20 22 25 25 25 27 29 29 30 LCS_GDT T 118 T 118 5 7 16 4 4 5 11 11 13 14 15 15 18 20 20 22 25 25 25 27 29 29 30 LCS_GDT H 119 H 119 5 7 16 4 4 5 11 11 13 14 15 16 18 20 20 22 25 25 25 27 29 29 30 LCS_GDT K 120 K 120 5 7 16 3 4 5 11 11 13 14 15 16 18 20 20 22 25 25 25 27 29 29 30 LCS_GDT P 121 P 121 5 7 16 3 4 4 6 7 10 12 15 16 18 20 20 22 25 25 25 27 29 29 30 LCS_GDT I 122 I 122 5 7 16 3 4 4 5 7 8 8 10 16 18 20 20 21 25 25 25 27 29 29 30 LCS_GDT Y 123 Y 123 5 6 16 3 4 4 5 7 8 9 10 11 12 14 15 16 17 17 18 20 29 29 30 LCS_GDT K 124 K 124 3 6 16 3 3 4 5 6 7 7 8 8 10 11 13 14 16 16 16 20 20 21 22 LCS_GDT K 125 K 125 3 5 15 3 3 4 4 5 7 7 8 8 8 8 9 9 12 13 14 15 17 17 19 LCS_AVERAGE LCS_A: 12.30 ( 5.45 8.91 22.52 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 12 14 16 18 21 24 29 33 36 39 42 45 47 50 52 56 57 59 60 GDT PERCENT_AT 9.17 10.00 11.67 13.33 15.00 17.50 20.00 24.17 27.50 30.00 32.50 35.00 37.50 39.17 41.67 43.33 46.67 47.50 49.17 50.00 GDT RMS_LOCAL 0.31 0.44 0.66 0.97 1.43 1.88 2.16 2.78 3.01 3.33 3.52 3.75 4.12 4.32 4.73 5.03 5.44 5.52 5.67 5.88 GDT RMS_ALL_AT 24.00 23.89 23.90 24.06 24.43 24.94 25.04 24.91 25.26 24.74 24.71 24.71 24.51 24.49 24.50 24.27 24.21 24.19 24.18 24.16 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA L 11 L 11 19.247 4 0.609 0.609 20.692 0.000 0.000 LGA N 12 N 12 15.400 4 0.595 0.595 16.488 0.000 0.000 LGA A 13 A 13 17.651 1 0.561 0.561 20.416 0.000 0.000 LGA R 19 R 19 17.882 7 0.422 0.422 18.121 0.000 0.000 LGA I 20 I 20 17.204 4 0.059 0.059 18.392 0.000 0.000 LGA E 21 E 21 19.934 5 0.062 0.062 19.934 0.000 0.000 LGA A 22 A 22 21.067 1 0.545 0.545 24.127 0.000 0.000 LGA K 23 K 23 24.024 5 0.359 0.359 25.120 0.000 0.000 LGA R 24 R 24 26.689 7 0.094 0.094 26.689 0.000 0.000 LGA A 25 A 25 27.159 1 0.672 0.672 27.269 0.000 0.000 LGA S 26 S 26 27.159 2 0.614 0.614 27.305 0.000 0.000 LGA D 27 D 27 20.646 4 0.096 0.096 22.833 0.000 0.000 LGA M 28 M 28 20.972 4 0.260 0.260 21.109 0.000 0.000 LGA G 29 G 29 19.725 0 0.371 0.371 19.983 0.000 0.000 LGA K 30 K 30 19.983 5 0.112 0.112 20.433 0.000 0.000 LGA S 31 S 31 19.573 2 0.050 0.050 19.835 0.000 0.000 LGA V 32 V 32 13.399 3 0.211 0.211 15.758 0.357 0.204 LGA M 33 M 33 9.862 4 0.033 0.033 11.422 4.167 2.083 LGA E 34 E 34 10.138 5 0.023 0.023 10.537 1.548 0.688 LGA T 35 T 35 10.821 3 0.043 0.043 10.821 1.071 0.612 LGA V 36 V 36 5.008 3 0.626 0.626 6.782 33.214 18.980 LGA I 37 I 37 3.119 4 0.585 0.585 5.901 39.643 19.821 LGA A 38 A 38 5.031 1 0.492 0.492 7.719 24.524 19.619 LGA F 39 F 39 4.699 7 0.658 0.658 6.084 29.286 10.649 LGA A 40 A 40 6.754 1 0.656 0.656 8.131 14.405 11.524 LGA N 41 N 41 6.745 4 0.555 0.555 6.745 18.333 9.167 LGA E 42 E 42 5.304 5 0.447 0.447 6.489 21.548 9.577 LGA P 43 P 43 7.711 3 0.620 0.620 8.838 8.571 4.898 LGA G 44 G 44 6.556 0 0.099 0.099 6.569 14.286 14.286 LGA L 45 L 45 6.148 4 0.189 0.189 6.301 17.143 8.571 LGA D 46 D 46 6.600 4 0.595 0.595 6.600 19.762 9.881 LGA G 47 G 47 1.298 0 0.868 0.868 2.837 71.190 71.190 LGA G 48 G 48 2.747 0 0.067 0.067 2.747 69.048 69.048 LGA Y 49 Y 49 3.280 8 0.039 0.039 5.278 42.381 14.127 LGA L 50 L 50 4.119 4 0.039 0.039 4.492 41.905 20.952 LGA L 51 L 51 6.526 4 0.080 0.080 6.526 24.405 12.202 LGA L 52 L 52 4.120 4 0.648 0.648 4.817 38.810 19.405 LGA G 53 G 53 4.599 0 0.136 0.136 7.336 23.929 23.929 LGA V 54 V 54 9.631 3 0.596 0.596 11.479 2.619 1.497 LGA D 55 D 55 15.106 4 0.574 0.574 17.033 0.000 0.000 LGA W 56 W 56 16.643 10 0.177 0.177 18.894 0.000 0.000 LGA A 57 A 57 22.232 1 0.083 0.083 24.306 0.000 0.000 LGA I 58 I 58 27.865 4 0.079 0.079 30.642 0.000 0.000 LGA N 59 N 59 32.735 4 0.103 0.103 36.017 0.000 0.000 LGA D 60 D 60 39.787 4 0.026 0.026 42.373 0.000 0.000 LGA K 61 K 61 40.131 5 0.096 0.096 40.687 0.000 0.000 LGA G 62 G 62 36.938 0 0.042 0.042 37.677 0.000 0.000 LGA D 63 D 63 31.476 4 0.058 0.058 33.656 0.000 0.000 LGA T 64 T 64 25.362 3 0.100 0.100 27.641 0.000 0.000 LGA V 65 V 65 21.012 3 0.106 0.106 22.632 0.000 0.000 LGA Y 66 Y 66 15.364 8 0.016 0.016 17.481 0.000 0.000 LGA R 67 R 67 10.721 7 0.052 0.052 12.169 1.905 0.693 LGA P 68 P 68 5.669 3 0.638 0.638 7.206 17.500 10.000 LGA V 69 V 69 6.337 3 0.671 0.671 6.337 28.690 16.395 LGA G 70 G 70 2.223 0 0.672 0.672 5.163 47.738 47.738 LGA L 71 L 71 4.264 4 0.222 0.222 4.264 54.286 27.143 LGA P 72 P 72 4.252 3 0.074 0.074 4.308 47.262 27.007 LGA D 73 D 73 1.584 4 0.509 0.509 2.322 70.952 35.476 LGA P 74 P 74 2.933 3 0.068 0.068 2.999 57.143 32.653 LGA D 75 D 75 2.869 4 0.144 0.144 2.869 59.048 29.524 LGA K 76 K 76 2.501 5 0.217 0.217 2.736 60.952 27.090 LGA V 77 V 77 1.348 3 0.024 0.024 1.589 81.548 46.599 LGA Q 78 Q 78 0.650 5 0.036 0.036 1.061 85.952 38.201 LGA R 79 R 79 1.790 7 0.035 0.035 2.068 72.976 26.537 LGA D 80 D 80 2.416 4 0.084 0.084 2.416 64.762 32.381 LGA L 81 L 81 1.513 4 0.034 0.034 1.682 79.405 39.702 LGA A 82 A 82 0.397 1 0.024 0.024 0.804 92.857 74.286 LGA S 83 S 83 1.780 2 0.026 0.026 1.859 75.000 50.000 LGA Q 84 Q 84 2.668 5 0.058 0.058 2.668 62.857 27.937 LGA C 85 C 85 2.049 2 0.087 0.087 2.053 73.095 48.730 LGA A 86 A 86 0.396 1 0.488 0.488 3.395 76.310 61.048 LGA S 87 S 87 4.728 2 0.036 0.036 8.605 23.571 15.714 LGA M 88 M 88 9.927 4 0.186 0.186 11.944 1.905 0.952 LGA L 89 L 89 9.311 4 0.081 0.081 10.374 1.190 0.595 LGA N 90 N 90 13.491 4 0.641 0.641 13.491 0.000 0.000 LGA V 91 V 91 11.738 3 0.439 0.439 12.334 0.000 0.000 LGA A 92 A 92 11.472 1 0.575 0.575 12.494 0.000 0.000 LGA L 93 L 93 14.133 4 0.200 0.200 14.133 0.000 0.000 LGA R 94 R 94 11.360 7 0.135 0.135 12.719 0.000 0.000 LGA P 95 P 95 10.549 3 0.051 0.051 10.639 0.119 0.068 LGA E 96 E 96 10.324 5 0.211 0.211 10.526 1.071 0.476 LGA M 97 M 97 7.544 4 0.038 0.038 8.634 7.500 3.750 LGA Q 98 Q 98 5.907 5 0.060 0.060 6.342 22.738 10.106 LGA L 99 L 99 4.179 4 0.049 0.049 4.795 38.810 19.405 LGA E 100 E 100 3.712 5 0.609 0.609 6.367 35.238 15.661 LGA Q 101 Q 101 2.610 5 0.186 0.186 2.610 69.286 30.794 LGA V 102 V 102 3.096 3 0.104 0.104 3.729 55.714 31.837 LGA G 103 G 103 1.209 0 0.536 0.536 1.924 79.405 79.405 LGA G 104 G 104 3.238 0 0.439 0.439 5.783 42.619 42.619 LGA K 105 K 105 8.845 5 0.294 0.294 12.325 4.048 1.799 LGA T 106 T 106 15.973 3 0.247 0.247 18.395 0.000 0.000 LGA L 107 L 107 21.793 4 0.035 0.035 24.405 0.000 0.000 LGA L 108 L 108 29.135 4 0.227 0.227 30.612 0.000 0.000 LGA V 109 V 109 33.829 3 0.617 0.617 36.899 0.000 0.000 LGA V 110 V 110 38.548 3 0.212 0.212 39.851 0.000 0.000 LGA Y 111 Y 111 42.960 8 0.087 0.087 44.414 0.000 0.000 LGA V 112 V 112 43.839 3 0.623 0.623 45.354 0.000 0.000 LGA P 113 P 113 49.038 3 0.587 0.587 51.541 0.000 0.000 LGA E 114 E 114 54.022 5 0.614 0.614 54.484 0.000 0.000 LGA A 115 A 115 54.009 1 0.606 0.606 54.695 0.000 0.000 LGA D 116 D 116 56.070 4 0.632 0.632 57.951 0.000 0.000 LGA V 117 V 117 62.131 3 0.169 0.169 64.971 0.000 0.000 LGA T 118 T 118 64.399 3 0.045 0.045 64.399 0.000 0.000 LGA H 119 H 119 58.387 6 0.683 0.683 60.175 0.000 0.000 LGA K 120 K 120 57.680 5 0.183 0.183 58.180 0.000 0.000 LGA P 121 P 121 55.497 3 0.349 0.349 57.682 0.000 0.000 LGA I 122 I 122 51.668 4 0.165 0.165 53.160 0.000 0.000 LGA Y 123 Y 123 51.611 8 0.136 0.136 51.867 0.000 0.000 LGA K 124 K 124 53.015 5 0.211 0.211 57.075 0.000 0.000 LGA K 125 K 125 56.907 5 0.296 0.296 56.907 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 110 440 440 100.00 841 440 52.32 120 SUMMARY(RMSD_GDC): 20.048 20.128 20.128 17.963 11.044 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 110 120 4.0 29 2.78 22.708 19.552 1.008 LGA_LOCAL RMSD: 2.778 Number of atoms: 29 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 24.913 Number of assigned atoms: 110 Std_ASGN_ATOMS RMSD: 20.048 Standard rmsd on all 110 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.084562 * X + 0.809060 * Y + -0.581611 * Z + 32.767136 Y_new = 0.275169 * X + -0.579965 * Y + -0.766761 * Z + 15.849886 Z_new = -0.957670 * X + -0.095202 * Y + -0.271671 * Z + 31.883148 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.272647 1.278795 -2.804533 [DEG: 72.9173 73.2696 -160.6879 ] ZXZ: -0.648938 1.845926 -1.669881 [DEG: -37.1814 105.7637 -95.6771 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0557TS328_1-D1 REMARK 2: T0557-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0557TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 110 120 4.0 29 2.78 19.552 20.05 REMARK ---------------------------------------------------------- MOLECULE T0557TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0557 REMARK MODEL 1 REMARK PARENT 1mp9_A ATOM 1 N LEU 11 7.099 -18.529 -3.965 1.00 3.00 N ATOM 2 CA LEU 11 6.158 -17.702 -3.204 1.00 3.00 C ATOM 3 C LEU 11 5.717 -16.572 -4.109 1.00 3.00 C ATOM 4 O LEU 11 6.540 -15.837 -4.640 1.00 3.00 O ATOM 5 N ASN 12 4.413 -16.469 -4.323 1.00 3.00 N ATOM 6 CA ASN 12 3.854 -15.426 -5.171 1.00 3.00 C ATOM 7 C ASN 12 2.646 -15.432 -4.258 1.00 3.00 C ATOM 8 O ASN 12 1.638 -16.093 -4.577 1.00 3.00 O ATOM 9 N ALA 13 2.649 -14.682 -3.169 1.00 3.00 N ATOM 10 CA ALA 13 1.474 -14.595 -2.306 1.00 3.00 C ATOM 11 C ALA 13 1.611 -13.378 -1.408 1.00 3.00 C ATOM 12 O ALA 13 2.651 -12.703 -1.422 1.00 3.00 O ATOM 33 N ARG 19 -1.675 -8.158 8.558 1.00 3.00 N ATOM 34 CA ARG 19 -0.647 -7.672 9.458 1.00 3.00 C ATOM 35 C ARG 19 0.419 -7.044 10.376 1.00 3.00 C ATOM 36 O ARG 19 1.296 -7.752 10.883 1.00 3.00 O ATOM 37 N ILE 20 0.365 -5.721 10.550 1.00 3.00 N ATOM 38 CA ILE 20 1.297 -5.033 11.423 1.00 3.00 C ATOM 39 C ILE 20 0.446 -4.177 12.331 1.00 3.00 C ATOM 40 O ILE 20 -0.254 -3.273 11.863 1.00 3.00 O ATOM 41 N GLU 21 0.489 -4.470 13.626 1.00 3.00 N ATOM 42 CA GLU 21 -0.316 -3.715 14.569 1.00 3.00 C ATOM 43 C GLU 21 0.480 -2.536 15.089 1.00 3.00 C ATOM 44 O GLU 21 1.573 -2.707 15.628 1.00 3.00 O ATOM 45 N ALA 22 -0.049 -1.335 14.895 1.00 3.00 N ATOM 46 CA ALA 22 0.645 -0.139 15.356 1.00 3.00 C ATOM 47 C ALA 22 0.159 0.284 16.738 1.00 3.00 C ATOM 48 O ALA 22 0.507 1.364 17.228 1.00 3.00 O ATOM 49 N LYS 23 -0.652 -0.576 17.349 1.00 3.00 N ATOM 50 CA LYS 23 -1.199 -0.366 18.697 1.00 3.00 C ATOM 51 C LYS 23 -1.474 1.109 19.035 1.00 3.00 C ATOM 52 O LYS 23 -0.797 1.705 19.881 1.00 3.00 O ATOM 53 N ARG 24 -2.475 1.677 18.354 1.00 3.00 N ATOM 54 CA ARG 24 -2.912 3.067 18.533 1.00 3.00 C ATOM 55 C ARG 24 -3.965 3.411 17.481 1.00 3.00 C ATOM 56 O ARG 24 -3.930 2.902 16.355 1.00 3.00 O ATOM 57 N ALA 25 -4.889 4.285 17.846 1.00 3.00 N ATOM 58 CA ALA 25 -5.932 4.720 16.929 1.00 3.00 C ATOM 59 C ALA 25 -5.314 5.783 16.029 1.00 3.00 C ATOM 60 O ALA 25 -4.447 6.551 16.459 1.00 3.00 O ATOM 61 N SER 26 -5.734 5.809 14.769 1.00 3.00 N ATOM 62 CA SER 26 -5.162 6.732 13.822 1.00 3.00 C ATOM 63 C SER 26 -5.127 5.976 12.491 1.00 3.00 C ATOM 64 O SER 26 -5.767 4.938 12.346 1.00 3.00 O ATOM 65 N ASP 27 -4.396 6.509 11.523 1.00 3.00 N ATOM 66 CA ASP 27 -4.314 5.856 10.225 1.00 3.00 C ATOM 67 C ASP 27 -5.441 6.301 9.304 1.00 3.00 C ATOM 68 O ASP 27 -5.591 5.781 8.190 1.00 3.00 O ATOM 69 N MET 28 -6.238 7.251 9.758 1.00 3.00 N ATOM 70 CA MET 28 -7.344 7.742 8.947 1.00 3.00 C ATOM 71 C MET 28 -6.871 8.800 7.953 1.00 3.00 C ATOM 72 O MET 28 -5.749 9.297 8.033 1.00 3.00 O ATOM 73 N GLY 29 -7.733 9.138 7.014 1.00 9.00 N ATOM 74 CA GLY 29 -7.425 10.137 6.007 1.00 9.00 C ATOM 75 C GLY 29 -6.986 11.425 6.703 1.00 9.00 C ATOM 76 O GLY 29 -5.948 12.015 6.375 1.00 9.00 O ATOM 77 N LYS 30 -7.793 11.853 7.666 1.00 3.00 N ATOM 78 CA LYS 30 -7.535 13.060 8.418 1.00 3.00 C ATOM 79 C LYS 30 -6.221 12.977 9.200 1.00 3.00 C ATOM 80 O LYS 30 -5.418 13.899 9.157 1.00 3.00 O ATOM 81 N SER 31 -6.012 11.874 9.910 1.00 3.00 N ATOM 82 CA SER 31 -4.782 11.722 10.693 1.00 3.00 C ATOM 83 C SER 31 -3.540 11.679 9.819 1.00 3.00 C ATOM 84 O SER 31 -2.477 12.187 10.193 1.00 3.00 O ATOM 85 N VAL 32 -3.649 11.097 8.628 1.00 3.00 N ATOM 86 CA VAL 32 -2.499 11.011 7.745 1.00 3.00 C ATOM 87 C VAL 32 -2.432 11.237 6.254 1.00 3.00 C ATOM 88 O VAL 32 -1.356 11.473 5.716 1.00 3.00 O ATOM 89 N MET 33 -3.577 11.191 5.575 1.00 3.00 N ATOM 90 CA MET 33 -3.608 11.418 4.126 1.00 3.00 C ATOM 91 C MET 33 -3.044 12.795 3.795 1.00 3.00 C ATOM 92 O MET 33 -2.283 12.954 2.833 1.00 3.00 O ATOM 93 N GLU 34 -3.425 13.797 4.586 1.00 3.00 N ATOM 94 CA GLU 34 -2.933 15.155 4.356 1.00 3.00 C ATOM 95 C GLU 34 -1.448 15.260 4.693 1.00 3.00 C ATOM 96 O GLU 34 -0.702 15.953 4.003 1.00 3.00 O ATOM 97 N THR 35 -1.014 14.570 5.745 1.00 3.00 N ATOM 98 CA THR 35 0.387 14.636 6.141 1.00 3.00 C ATOM 99 C THR 35 1.346 13.876 5.242 1.00 3.00 C ATOM 100 O THR 35 2.419 14.381 4.904 1.00 3.00 O ATOM 101 N VAL 36 0.972 12.661 4.866 1.00 3.00 N ATOM 102 CA VAL 36 1.817 11.827 4.020 1.00 3.00 C ATOM 103 C VAL 36 1.498 12.070 2.552 1.00 3.00 C ATOM 104 O VAL 36 0.357 11.989 2.121 1.00 3.00 O ATOM 105 N ILE 37 2.520 12.369 1.759 1.00 3.00 N ATOM 106 CA ILE 37 2.292 12.614 0.341 1.00 3.00 C ATOM 107 C ILE 37 1.915 11.373 -0.455 1.00 3.00 C ATOM 108 O ILE 37 2.305 10.244 -0.126 1.00 3.00 O ATOM 109 N ALA 38 1.135 11.609 -1.499 1.00 3.00 N ATOM 110 CA ALA 38 0.714 10.579 -2.425 1.00 3.00 C ATOM 111 C ALA 38 0.086 9.298 -1.876 1.00 3.00 C ATOM 112 O ALA 38 0.408 8.203 -2.344 1.00 3.00 O ATOM 113 N PHE 39 -0.786 9.417 -0.884 1.00 3.00 N ATOM 114 CA PHE 39 -1.478 8.244 -0.372 1.00 3.00 C ATOM 115 C PHE 39 -2.946 8.496 -0.664 1.00 3.00 C ATOM 116 O PHE 39 -3.344 9.609 -1.006 1.00 3.00 O ATOM 117 N ALA 40 -3.771 7.478 -0.524 1.00 3.00 N ATOM 118 CA ALA 40 -5.172 7.663 -0.811 1.00 3.00 C ATOM 119 C ALA 40 -6.074 7.281 0.351 1.00 3.00 C ATOM 120 O ALA 40 -5.867 6.239 1.000 1.00 3.00 O ATOM 121 N ASN 41 -7.086 8.113 0.599 1.00 3.00 N ATOM 122 CA ASN 41 -8.038 7.842 1.666 1.00 3.00 C ATOM 123 C ASN 41 -9.391 8.410 1.331 1.00 3.00 C ATOM 124 O ASN 41 -9.582 9.614 1.343 1.00 3.00 O ATOM 125 N GLU 42 -10.333 7.535 1.019 1.00 3.00 N ATOM 126 CA GLU 42 -11.674 7.954 0.714 1.00 3.00 C ATOM 127 C GLU 42 -11.339 6.727 1.580 1.00 3.00 C ATOM 128 O GLU 42 -11.525 5.583 1.164 1.00 3.00 O ATOM 129 N PRO 43 -10.879 7.005 2.797 1.00 3.00 N ATOM 130 CA PRO 43 -10.458 5.958 3.737 1.00 3.00 C ATOM 131 C PRO 43 -11.505 4.917 4.048 1.00 3.00 C ATOM 132 O PRO 43 -11.147 3.780 4.356 1.00 3.00 O ATOM 133 N GLY 44 -12.788 5.268 4.021 1.00 3.00 N ATOM 134 CA GLY 44 -13.739 4.218 4.309 1.00 3.00 C ATOM 135 C GLY 44 -13.779 3.105 3.272 1.00 3.00 C ATOM 136 O GLY 44 -14.400 2.072 3.529 1.00 3.00 O ATOM 137 N LEU 45 -13.125 3.302 2.118 1.00 3.00 N ATOM 138 CA LEU 45 -13.040 2.244 1.094 1.00 3.00 C ATOM 139 C LEU 45 -11.633 1.686 0.972 1.00 3.00 C ATOM 140 O LEU 45 -11.442 0.531 0.525 1.00 3.00 O ATOM 141 N ASP 46 -10.642 2.492 1.382 1.00 3.00 N ATOM 142 CA ASP 46 -9.222 2.135 1.200 1.00 3.00 C ATOM 143 C ASP 46 -8.389 1.999 2.529 1.00 3.00 C ATOM 144 O ASP 46 -7.220 1.705 2.477 1.00 3.00 O ATOM 145 N GLY 47 -9.055 2.213 3.632 1.00 3.00 N ATOM 146 CA GLY 47 -8.450 2.185 4.952 1.00 3.00 C ATOM 147 C GLY 47 -7.715 3.140 4.066 1.00 3.00 C ATOM 148 O GLY 47 -8.141 3.392 2.940 1.00 3.00 O ATOM 149 N GLY 48 -6.619 3.697 4.592 1.00 3.00 N ATOM 150 CA GLY 48 -5.752 4.593 3.850 1.00 3.00 C ATOM 151 C GLY 48 -4.834 3.646 3.055 1.00 3.00 C ATOM 152 O GLY 48 -4.279 2.673 3.607 1.00 3.00 O ATOM 153 N TYR 49 -4.658 3.947 1.772 1.00 3.00 N ATOM 154 CA TYR 49 -3.840 3.115 0.886 1.00 3.00 C ATOM 155 C TYR 49 -2.479 3.748 0.661 1.00 3.00 C ATOM 156 O TYR 49 -2.373 4.850 0.103 1.00 3.00 O ATOM 157 N LEU 50 -1.443 3.048 1.112 1.00 3.00 N ATOM 158 CA LEU 50 -0.068 3.513 1.022 1.00 3.00 C ATOM 159 C LEU 50 0.643 2.579 0.051 1.00 3.00 C ATOM 160 O LEU 50 0.776 1.403 0.315 1.00 3.00 O ATOM 161 N LEU 51 1.094 3.097 -1.083 1.00 3.00 N ATOM 162 CA LEU 51 1.750 2.237 -2.052 1.00 3.00 C ATOM 163 C LEU 51 1.589 0.735 -1.978 1.00 3.00 C ATOM 164 O LEU 51 1.934 0.187 -0.918 1.00 3.00 O ATOM 165 N LEU 52 1.116 0.031 -3.045 1.00 3.00 N ATOM 166 CA LEU 52 0.902 -1.424 -3.055 1.00 3.00 C ATOM 167 C LEU 52 2.041 -2.352 -2.641 1.00 3.00 C ATOM 168 O LEU 52 1.785 -3.370 -1.995 1.00 3.00 O ATOM 169 N GLY 53 3.293 -1.998 -2.944 1.00 3.00 N ATOM 170 CA GLY 53 4.413 -2.844 -2.617 1.00 3.00 C ATOM 171 C GLY 53 5.125 -2.545 -1.331 1.00 3.00 C ATOM 172 O GLY 53 6.165 -3.147 -1.092 1.00 3.00 O ATOM 173 N VAL 54 4.639 -1.618 -0.489 1.00 3.00 N ATOM 174 CA VAL 54 5.269 -1.362 0.816 1.00 3.00 C ATOM 175 C VAL 54 4.362 -0.645 1.820 1.00 3.00 C ATOM 176 O VAL 54 4.247 -1.112 2.938 1.00 3.00 O ATOM 177 N ASP 55 3.729 0.499 1.536 1.00 3.00 N ATOM 178 CA ASP 55 2.931 1.228 2.513 1.00 3.00 C ATOM 179 C ASP 55 1.775 0.350 2.996 1.00 3.00 C ATOM 180 O ASP 55 1.685 0.162 4.203 1.00 3.00 O ATOM 181 N TRP 56 0.952 -0.271 2.144 1.00 3.00 N ATOM 182 CA TRP 56 -0.120 -1.105 2.636 1.00 3.00 C ATOM 183 C TRP 56 -1.483 -0.474 2.846 1.00 3.00 C ATOM 184 O TRP 56 -1.739 0.613 2.326 1.00 3.00 O ATOM 185 N ALA 57 -2.370 -1.157 3.552 1.00 3.00 N ATOM 186 CA ALA 57 -3.707 -0.605 3.825 1.00 3.00 C ATOM 187 C ALA 57 -3.683 -0.303 5.317 1.00 3.00 C ATOM 188 O ALA 57 -3.472 -1.218 6.127 1.00 3.00 O ATOM 189 N ILE 58 -3.905 0.972 5.662 1.00 3.00 N ATOM 190 CA ILE 58 -3.839 1.426 7.044 1.00 3.00 C ATOM 191 C ILE 58 -5.214 1.781 7.603 1.00 3.00 C ATOM 192 O ILE 58 -5.907 2.665 7.099 1.00 3.00 O ATOM 193 N ASN 59 -5.606 1.078 8.652 1.00 3.00 N ATOM 194 CA ASN 59 -6.911 1.309 9.255 1.00 3.00 C ATOM 195 C ASN 59 -6.882 2.169 10.516 1.00 3.00 C ATOM 196 O ASN 59 -5.846 2.285 11.174 1.00 3.00 O ATOM 197 N ASP 60 -8.014 2.798 10.829 1.00 3.00 N ATOM 198 CA ASP 60 -8.120 3.668 12.010 1.00 3.00 C ATOM 199 C ASP 60 -7.693 2.956 13.289 1.00 3.00 C ATOM 200 O ASP 60 -7.191 3.579 14.205 1.00 3.00 O ATOM 201 N LYS 61 -7.892 1.651 13.349 1.00 3.00 N ATOM 202 CA LYS 61 -7.516 0.876 14.531 1.00 3.00 C ATOM 203 C LYS 61 -6.016 0.738 14.698 1.00 3.00 C ATOM 204 O LYS 61 -5.563 0.191 15.701 1.00 3.00 O ATOM 205 N GLY 62 -5.246 1.204 13.711 1.00 3.00 N ATOM 206 CA GLY 62 -3.804 1.088 13.770 1.00 3.00 C ATOM 207 C GLY 62 -3.323 -0.211 13.139 1.00 3.00 C ATOM 208 O GLY 62 -2.114 -0.483 13.047 1.00 3.00 O ATOM 209 N ASP 63 -4.277 -1.039 12.737 1.00 3.00 N ATOM 210 CA ASP 63 -3.922 -2.290 12.103 1.00 3.00 C ATOM 211 C ASP 63 -3.489 -1.937 10.692 1.00 3.00 C ATOM 212 O ASP 63 -4.142 -1.137 10.015 1.00 3.00 O ATOM 213 N THR 64 -2.381 -2.508 10.253 1.00 3.00 N ATOM 214 CA THR 64 -1.939 -2.254 8.894 1.00 3.00 C ATOM 215 C THR 64 -1.845 -3.604 8.145 1.00 3.00 C ATOM 216 O THR 64 -1.321 -4.590 8.670 1.00 3.00 O ATOM 217 N VAL 65 -2.396 -3.664 6.939 1.00 3.00 N ATOM 218 CA VAL 65 -2.296 -4.886 6.152 1.00 3.00 C ATOM 219 C VAL 65 -1.282 -4.586 5.049 1.00 3.00 C ATOM 220 O VAL 65 -1.433 -3.603 4.332 1.00 3.00 O ATOM 221 N TYR 66 -0.259 -5.430 4.921 1.00 3.00 N ATOM 222 CA TYR 66 0.781 -5.247 3.910 1.00 3.00 C ATOM 223 C TYR 66 0.738 -6.414 2.933 1.00 3.00 C ATOM 224 O TYR 66 0.758 -7.585 3.334 1.00 3.00 O ATOM 225 N ARG 67 0.678 -6.092 1.646 1.00 3.00 N ATOM 226 CA ARG 67 0.582 -7.113 0.630 1.00 3.00 C ATOM 227 C ARG 67 1.575 -6.871 -0.501 1.00 3.00 C ATOM 228 O ARG 67 1.951 -5.720 -0.768 1.00 3.00 O ATOM 229 N PRO 68 2.018 -7.951 -1.141 1.00 3.00 N ATOM 230 CA PRO 68 2.956 -7.817 -2.246 1.00 3.00 C ATOM 231 C PRO 68 4.331 -8.445 -2.072 1.00 3.00 C ATOM 232 O PRO 68 4.958 -8.832 -3.072 1.00 3.00 O ATOM 233 N VAL 69 4.813 -8.573 -0.833 1.00 3.00 N ATOM 234 CA VAL 69 6.146 -9.153 -0.603 1.00 3.00 C ATOM 235 C VAL 69 6.174 -10.634 -0.996 1.00 3.00 C ATOM 236 O VAL 69 5.170 -11.343 -0.828 1.00 3.00 O ATOM 237 N GLY 70 7.309 -11.099 -1.519 1.00 3.00 N ATOM 238 CA GLY 70 7.429 -12.492 -1.939 1.00 3.00 C ATOM 239 C GLY 70 8.361 -13.283 -1.076 1.00 3.00 C ATOM 240 O GLY 70 8.661 -14.419 -1.401 1.00 3.00 O ATOM 241 N LEU 71 8.832 -12.673 0.006 1.00 3.00 N ATOM 242 CA LEU 71 9.716 -13.325 0.969 1.00 3.00 C ATOM 243 C LEU 71 10.115 -12.441 2.161 1.00 3.00 C ATOM 244 O LEU 71 9.413 -11.473 2.491 1.00 3.00 O ATOM 245 N PRO 72 11.259 -12.750 2.785 1.00 3.00 N ATOM 246 CA PRO 72 11.796 -11.956 3.904 1.00 3.00 C ATOM 247 C PRO 72 12.029 -10.493 3.426 1.00 3.00 C ATOM 248 O PRO 72 11.809 -9.524 4.148 1.00 3.00 O ATOM 249 N ASP 73 12.468 -10.384 2.188 1.00 3.00 N ATOM 250 CA ASP 73 12.756 -9.099 1.558 1.00 3.00 C ATOM 251 C ASP 73 11.610 -8.078 1.581 1.00 3.00 C ATOM 252 O ASP 73 11.849 -6.874 1.699 1.00 3.00 O ATOM 253 N PRO 74 10.361 -8.545 1.481 1.00 3.00 N ATOM 254 CA PRO 74 9.188 -7.662 1.517 1.00 3.00 C ATOM 255 C PRO 74 9.086 -6.813 2.777 1.00 3.00 C ATOM 256 O PRO 74 8.722 -5.661 2.729 1.00 3.00 O ATOM 257 N ASP 75 9.355 -7.425 3.923 1.00 3.00 N ATOM 258 CA ASP 75 9.138 -6.720 5.175 1.00 3.00 C ATOM 259 C ASP 75 10.113 -5.541 5.416 1.00 3.00 C ATOM 260 O ASP 75 9.872 -4.740 6.329 1.00 3.00 O ATOM 261 N LYS 76 11.160 -5.456 4.579 1.00 3.00 N ATOM 262 CA LYS 76 12.160 -4.382 4.610 1.00 3.00 C ATOM 263 C LYS 76 11.042 -3.427 4.254 1.00 3.00 C ATOM 264 O LYS 76 11.138 -2.225 4.475 1.00 3.00 O ATOM 265 N VAL 77 9.978 -3.965 3.681 1.00 3.00 N ATOM 266 CA VAL 77 8.838 -3.136 3.314 1.00 3.00 C ATOM 267 C VAL 77 8.197 -2.509 4.541 1.00 3.00 C ATOM 268 O VAL 77 7.891 -1.325 4.555 1.00 3.00 O ATOM 269 N GLN 78 8.008 -3.298 5.589 1.00 3.00 N ATOM 270 CA GLN 78 7.376 -2.775 6.792 1.00 3.00 C ATOM 271 C GLN 78 8.217 -1.643 7.385 1.00 3.00 C ATOM 272 O GLN 78 7.687 -0.586 7.760 1.00 3.00 O ATOM 273 N ARG 79 9.522 -1.878 7.472 1.00 3.00 N ATOM 274 CA ARG 79 10.436 -0.866 8.005 1.00 3.00 C ATOM 275 C ARG 79 10.364 0.376 7.134 1.00 3.00 C ATOM 276 O ARG 79 10.338 1.504 7.624 1.00 3.00 O ATOM 277 N ASP 80 10.322 0.170 5.827 1.00 3.00 N ATOM 278 CA ASP 80 10.257 1.306 4.930 1.00 3.00 C ATOM 279 C ASP 80 8.966 2.076 5.191 1.00 3.00 C ATOM 280 O ASP 80 8.981 3.302 5.325 1.00 3.00 O ATOM 281 N LEU 81 7.850 1.358 5.310 1.00 3.00 N ATOM 282 CA LEU 81 6.574 2.027 5.546 1.00 3.00 C ATOM 283 C LEU 81 6.588 2.798 6.863 1.00 3.00 C ATOM 284 O LEU 81 6.233 3.980 6.910 1.00 3.00 O ATOM 285 N ALA 82 7.004 2.125 7.928 1.00 3.00 N ATOM 286 CA ALA 82 7.037 2.745 9.243 1.00 3.00 C ATOM 287 C ALA 82 7.934 3.977 9.263 1.00 3.00 C ATOM 288 O ALA 82 7.578 4.992 9.853 1.00 3.00 O ATOM 289 N SER 83 9.081 3.900 8.594 1.00 3.00 N ATOM 290 CA SER 83 10.000 5.036 8.553 1.00 3.00 C ATOM 291 C SER 83 9.254 6.266 8.019 1.00 3.00 C ATOM 292 O SER 83 9.293 7.349 8.619 1.00 3.00 O ATOM 293 N GLN 84 8.551 6.084 6.906 1.00 3.00 N ATOM 294 CA GLN 84 7.800 7.192 6.300 1.00 3.00 C ATOM 295 C GLN 84 6.698 7.732 7.203 1.00 3.00 C ATOM 296 O GLN 84 6.618 8.943 7.446 1.00 3.00 O ATOM 297 N CYS 85 5.838 6.850 7.697 1.00 3.00 N ATOM 298 CA CYS 85 4.778 7.303 8.578 1.00 3.00 C ATOM 299 C CYS 85 5.406 8.140 9.694 1.00 3.00 C ATOM 300 O CYS 85 4.841 9.155 10.119 1.00 3.00 O ATOM 301 N ALA 86 6.580 7.714 10.150 1.00 3.00 N ATOM 302 CA ALA 86 7.288 8.439 11.197 1.00 3.00 C ATOM 303 C ALA 86 7.689 8.859 12.617 1.00 3.00 C ATOM 304 O ALA 86 7.398 8.138 13.557 1.00 3.00 O ATOM 305 N SER 87 8.328 10.023 12.765 1.00 3.00 N ATOM 306 CA SER 87 8.726 10.467 14.097 1.00 3.00 C ATOM 307 C SER 87 7.551 10.780 15.019 1.00 3.00 C ATOM 308 O SER 87 7.686 10.742 16.267 1.00 3.00 O ATOM 309 N MET 88 6.399 11.110 14.445 1.00 3.00 N ATOM 310 CA MET 88 5.251 11.568 15.230 1.00 3.00 C ATOM 311 C MET 88 4.042 10.662 15.155 1.00 3.00 C ATOM 312 O MET 88 3.016 10.932 15.808 1.00 3.00 O ATOM 313 N LEU 89 4.148 9.604 14.333 1.00 3.00 N ATOM 314 CA LEU 89 3.021 8.634 14.355 1.00 3.00 C ATOM 315 C LEU 89 3.095 7.791 15.620 1.00 3.00 C ATOM 316 O LEU 89 4.040 7.884 16.405 1.00 3.00 O ATOM 317 N ASN 90 2.068 6.973 15.847 1.00 3.00 N ATOM 318 CA ASN 90 2.098 6.052 16.987 1.00 3.00 C ATOM 319 C ASN 90 3.405 5.238 16.887 1.00 3.00 C ATOM 320 O ASN 90 3.774 4.773 15.824 1.00 3.00 O ATOM 321 N VAL 91 4.118 5.137 17.991 1.00 3.00 N ATOM 322 CA VAL 91 5.373 4.429 18.053 1.00 3.00 C ATOM 323 C VAL 91 5.862 4.249 19.487 1.00 3.00 C ATOM 324 O VAL 91 6.970 4.672 19.841 1.00 3.00 O ATOM 325 N ALA 92 5.031 3.635 20.321 1.00 3.00 N ATOM 326 CA ALA 92 5.414 3.420 21.710 1.00 3.00 C ATOM 327 C ALA 92 6.370 2.240 21.796 1.00 3.00 C ATOM 328 O ALA 92 7.379 2.291 22.498 1.00 3.00 O ATOM 329 N LEU 93 6.051 1.177 21.069 1.00 3.00 N ATOM 330 CA LEU 93 6.899 0.004 21.086 1.00 3.00 C ATOM 331 C LEU 93 7.063 -0.620 19.716 1.00 3.00 C ATOM 332 O LEU 93 6.507 -0.115 18.737 1.00 3.00 O ATOM 333 N ARG 94 7.827 -1.711 19.644 1.00 3.00 N ATOM 334 CA ARG 94 8.058 -2.399 18.378 1.00 3.00 C ATOM 335 C ARG 94 6.784 -3.064 17.857 1.00 3.00 C ATOM 336 O ARG 94 6.161 -3.869 18.547 1.00 3.00 O ATOM 337 N PRO 95 6.367 -2.711 16.638 1.00 3.00 N ATOM 338 CA PRO 95 5.160 -3.313 16.071 1.00 3.00 C ATOM 339 C PRO 95 5.433 -4.763 15.710 1.00 3.00 C ATOM 340 O PRO 95 6.509 -5.096 15.233 1.00 3.00 O ATOM 341 N GLU 96 4.474 -5.637 15.953 1.00 3.00 N ATOM 342 CA GLU 96 4.676 -7.033 15.608 1.00 3.00 C ATOM 343 C GLU 96 4.085 -7.279 14.226 1.00 3.00 C ATOM 344 O GLU 96 3.107 -6.654 13.838 1.00 3.00 O ATOM 345 N MET 97 4.681 -8.217 13.509 1.00 3.00 N ATOM 346 CA MET 97 4.253 -8.564 12.171 1.00 3.00 C ATOM 347 C MET 97 3.710 -9.978 12.170 1.00 3.00 C ATOM 348 O MET 97 4.431 -10.896 12.531 1.00 3.00 O ATOM 349 N GLN 98 2.462 -10.163 11.764 1.00 3.00 N ATOM 350 CA GLN 98 1.901 -11.501 11.711 1.00 3.00 C ATOM 351 C GLN 98 1.482 -11.875 10.294 1.00 3.00 C ATOM 352 O GLN 98 0.728 -11.148 9.632 1.00 3.00 O ATOM 353 N LEU 99 1.959 -13.012 9.821 1.00 3.00 N ATOM 354 CA LEU 99 1.564 -13.451 8.495 1.00 3.00 C ATOM 355 C LEU 99 0.141 -13.978 8.529 1.00 3.00 C ATOM 356 O LEU 99 -0.207 -14.843 9.348 1.00 3.00 O ATOM 357 N GLU 100 -0.680 -13.438 7.641 1.00 3.00 N ATOM 358 CA GLU 100 -2.074 -13.846 7.516 1.00 3.00 C ATOM 359 C GLU 100 -2.246 -14.921 6.458 1.00 3.00 C ATOM 360 O GLU 100 -3.026 -15.827 6.645 1.00 3.00 O ATOM 361 N GLN 101 -1.539 -14.819 5.342 1.00 3.00 N ATOM 362 CA GLN 101 -1.669 -15.844 4.305 1.00 3.00 C ATOM 363 C GLN 101 -0.471 -15.774 3.378 1.00 3.00 C ATOM 364 O GLN 101 0.104 -14.711 3.184 1.00 3.00 O ATOM 365 N VAL 102 -0.114 -16.924 2.822 1.00 3.00 N ATOM 366 CA VAL 102 0.970 -16.998 1.872 1.00 3.00 C ATOM 367 C VAL 102 0.375 -17.647 0.634 1.00 3.00 C ATOM 368 O VAL 102 -0.319 -18.654 0.745 1.00 3.00 O ATOM 369 N GLY 103 0.574 -17.054 -0.538 1.00 3.00 N ATOM 370 CA GLY 103 0.061 -17.700 -1.739 1.00 3.00 C ATOM 371 C GLY 103 1.314 -18.128 -2.480 1.00 3.00 C ATOM 372 O GLY 103 2.226 -17.327 -2.682 1.00 3.00 O ATOM 373 N GLY 104 1.394 -19.390 -2.856 1.00 3.00 N ATOM 374 CA GLY 104 2.571 -19.940 -3.651 1.00 3.00 C ATOM 375 C GLY 104 3.138 -20.896 -4.740 1.00 3.00 C ATOM 376 O GLY 104 3.632 -20.360 -5.768 1.00 3.00 O ATOM 377 N LYS 105 3.083 -22.229 -4.517 1.00 3.00 N ATOM 378 CA LYS 105 3.759 -23.146 -5.332 1.00 3.00 C ATOM 379 C LYS 105 3.514 -24.650 -5.367 1.00 3.00 C ATOM 380 O LYS 105 4.243 -25.402 -4.708 1.00 3.00 O ATOM 381 N THR 106 2.516 -25.088 -6.141 1.00 3.00 N ATOM 382 CA THR 106 2.207 -26.510 -6.264 1.00 3.00 C ATOM 383 C THR 106 1.641 -26.943 -7.618 1.00 3.00 C ATOM 384 O THR 106 1.312 -26.099 -8.475 1.00 3.00 O ATOM 385 N LEU 107 1.544 -28.265 -7.806 1.00 3.00 N ATOM 386 CA LEU 107 1.016 -28.833 -9.026 1.00 3.00 C ATOM 387 C LEU 107 1.910 -29.902 -9.646 1.00 3.00 C ATOM 388 O LEU 107 3.039 -30.134 -9.188 1.00 3.00 O ATOM 389 N LEU 108 1.407 -30.559 -10.690 1.00 3.00 N ATOM 390 CA LEU 108 2.136 -31.607 -11.410 1.00 3.00 C ATOM 391 C LEU 108 1.400 -31.896 -12.718 1.00 3.00 C ATOM 392 O LEU 108 0.298 -31.402 -12.950 1.00 3.00 O ATOM 393 N VAL 109 2.024 -32.702 -13.579 1.00 3.00 N ATOM 394 CA VAL 109 1.437 -33.065 -14.854 1.00 3.00 C ATOM 395 C VAL 109 0.122 -33.820 -14.742 1.00 3.00 C ATOM 396 O VAL 109 -0.732 -33.706 -15.615 1.00 3.00 O ATOM 397 N VAL 110 -0.036 -34.614 -13.707 1.00 3.00 N ATOM 398 CA VAL 110 -1.291 -35.330 -13.469 1.00 3.00 C ATOM 399 C VAL 110 -2.502 -35.694 -14.054 1.00 3.00 C ATOM 400 O VAL 110 -3.108 -34.978 -14.831 1.00 3.00 O ATOM 401 N TYR 111 -2.894 -36.934 -13.790 1.00 3.00 N ATOM 402 CA TYR 111 -4.132 -37.422 -14.375 1.00 3.00 C ATOM 403 C TYR 111 -5.242 -36.969 -13.399 1.00 3.00 C ATOM 404 O TYR 111 -5.506 -37.633 -12.391 1.00 3.00 O ATOM 405 N VAL 112 -5.900 -35.854 -13.709 1.00 3.00 N ATOM 406 CA VAL 112 -6.936 -35.315 -12.821 1.00 3.00 C ATOM 407 C VAL 112 -8.210 -36.173 -12.719 1.00 3.00 C ATOM 408 O VAL 112 -8.780 -36.313 -11.620 1.00 3.00 O ATOM 409 N PRO 113 -8.634 -36.746 -13.854 1.00 3.00 N ATOM 410 CA PRO 113 -9.822 -37.619 -13.904 1.00 3.00 C ATOM 411 C PRO 113 -9.604 -38.784 -12.949 1.00 3.00 C ATOM 412 O PRO 113 -10.513 -39.166 -12.206 1.00 3.00 O ATOM 413 N GLU 114 -8.396 -39.344 -12.965 1.00 3.00 N ATOM 414 CA GLU 114 -8.089 -40.470 -12.101 1.00 3.00 C ATOM 415 C GLU 114 -7.917 -40.061 -10.654 1.00 3.00 C ATOM 416 O GLU 114 -8.431 -40.741 -9.755 1.00 3.00 O ATOM 417 N ALA 115 -7.183 -38.970 -10.423 1.00 3.00 N ATOM 418 CA ALA 115 -6.962 -38.473 -9.076 1.00 3.00 C ATOM 419 C ALA 115 -8.297 -38.065 -8.412 1.00 3.00 C ATOM 420 O ALA 115 -8.495 -38.274 -7.198 1.00 3.00 O ATOM 421 N ASP 116 -9.200 -37.493 -9.203 1.00 3.00 N ATOM 422 CA ASP 116 -10.484 -37.033 -8.681 1.00 3.00 C ATOM 423 C ASP 116 -11.266 -38.126 -7.964 1.00 3.00 C ATOM 424 O ASP 116 -11.994 -37.841 -7.021 1.00 3.00 O ATOM 425 N VAL 117 -11.136 -39.368 -8.406 1.00 3.00 N ATOM 426 CA VAL 117 -11.867 -40.425 -7.748 1.00 3.00 C ATOM 427 C VAL 117 -11.047 -41.285 -6.798 1.00 3.00 C ATOM 428 O VAL 117 -11.582 -42.206 -6.201 1.00 3.00 O ATOM 429 N THR 118 -9.755 -41.017 -6.653 1.00 3.00 N ATOM 430 CA THR 118 -8.970 -41.809 -5.721 1.00 3.00 C ATOM 431 C THR 118 -8.502 -40.974 -4.516 1.00 3.00 C ATOM 432 O THR 118 -8.114 -41.521 -3.477 1.00 3.00 O ATOM 433 N HIS 119 -8.512 -39.647 -4.663 1.00 3.00 N ATOM 434 CA HIS 119 -8.139 -38.778 -3.563 1.00 3.00 C ATOM 435 C HIS 119 -9.443 -38.541 -2.844 1.00 3.00 C ATOM 436 O HIS 119 -10.500 -38.840 -3.354 1.00 3.00 O ATOM 437 N LYS 120 -9.362 -37.991 -1.649 1.00 3.00 N ATOM 438 CA LYS 120 -10.562 -37.639 -0.910 1.00 3.00 C ATOM 439 C LYS 120 -10.786 -36.148 -1.172 1.00 3.00 C ATOM 440 O LYS 120 -10.147 -35.558 -2.057 1.00 3.00 O ATOM 441 N PRO 121 -11.676 -35.564 -0.373 1.00 3.00 N ATOM 442 CA PRO 121 -12.062 -34.142 -0.365 1.00 3.00 C ATOM 443 C PRO 121 -11.673 -33.226 -1.509 1.00 3.00 C ATOM 444 O PRO 121 -10.969 -32.210 -1.296 1.00 3.00 O ATOM 445 N ILE 122 -12.180 -33.508 -2.712 1.00 3.00 N ATOM 446 CA ILE 122 -11.817 -32.656 -3.834 1.00 3.00 C ATOM 447 C ILE 122 -12.925 -32.374 -4.821 1.00 3.00 C ATOM 448 O ILE 122 -13.970 -33.035 -4.845 1.00 3.00 O ATOM 449 N TYR 123 -12.656 -31.385 -5.663 1.00 3.00 N ATOM 450 CA TYR 123 -13.548 -31.040 -6.745 1.00 3.00 C ATOM 451 C TYR 123 -12.801 -31.141 -8.081 1.00 3.00 C ATOM 452 O TYR 123 -11.711 -30.580 -8.238 1.00 3.00 O ATOM 453 N LYS 124 -13.370 -31.887 -9.020 1.00 3.00 N ATOM 454 CA LYS 124 -12.829 -31.919 -10.360 1.00 3.00 C ATOM 455 C LYS 124 -14.016 -31.875 -11.294 1.00 3.00 C ATOM 456 O LYS 124 -14.639 -32.890 -11.604 1.00 3.00 O ATOM 457 N LYS 125 -14.341 -30.669 -11.731 1.00 3.00 N ATOM 458 CA LYS 125 -15.501 -30.451 -12.621 1.00 3.00 C ATOM 459 C LYS 125 -14.909 -29.552 -13.717 1.00 3.00 C ATOM 460 O LYS 125 -15.041 -28.326 -13.686 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 440 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 77.99 50.0 208 88.5 235 ARMSMC SECONDARY STRUCTURE . . 87.74 43.2 125 89.3 140 ARMSMC SURFACE . . . . . . . . 71.41 50.4 129 87.8 147 ARMSMC BURIED . . . . . . . . 87.67 49.4 79 89.8 88 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 84 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 75 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 50 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 56 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 52 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 38 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 29 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 34 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 14 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 6 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 5 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 20.05 (Number of atoms: 110) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 20.05 110 91.7 120 CRMSCA CRN = ALL/NP . . . . . 0.1823 CRMSCA SECONDARY STRUCTURE . . 18.49 63 90.0 70 CRMSCA SURFACE . . . . . . . . 20.87 69 90.8 76 CRMSCA BURIED . . . . . . . . 18.59 41 93.2 44 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 20.13 440 74.5 591 CRMSMC SECONDARY STRUCTURE . . 18.69 252 72.2 349 CRMSMC SURFACE . . . . . . . . 20.93 276 73.4 376 CRMSMC BURIED . . . . . . . . 18.71 164 76.3 215 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 1374 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 1302 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 841 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 862 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 512 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 20.13 440 23.7 1854 CRMSALL SECONDARY STRUCTURE . . 18.69 252 22.5 1121 CRMSALL SURFACE . . . . . . . . 20.93 276 23.7 1166 CRMSALL BURIED . . . . . . . . 18.71 164 23.8 688 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.725 0.679 0.340 110 91.7 120 ERRCA SECONDARY STRUCTURE . . 14.238 0.656 0.328 63 90.0 70 ERRCA SURFACE . . . . . . . . 16.799 0.708 0.354 69 90.8 76 ERRCA BURIED . . . . . . . . 13.918 0.631 0.315 41 93.2 44 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.788 0.679 0.340 440 74.5 591 ERRMC SECONDARY STRUCTURE . . 14.443 0.659 0.330 252 72.2 349 ERRMC SURFACE . . . . . . . . 16.837 0.708 0.354 276 73.4 376 ERRMC BURIED . . . . . . . . 14.023 0.630 0.315 164 76.3 215 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 1374 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 1302 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 841 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 862 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 512 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.788 0.679 0.340 440 23.7 1854 ERRALL SECONDARY STRUCTURE . . 14.443 0.659 0.330 252 22.5 1121 ERRALL SURFACE . . . . . . . . 16.837 0.708 0.354 276 23.7 1166 ERRALL BURIED . . . . . . . . 14.023 0.630 0.315 164 23.8 688 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 2 13 110 120 DISTCA CA (P) 0.00 0.00 0.83 1.67 10.83 120 DISTCA CA (RMS) 0.00 0.00 2.99 4.06 6.83 DISTCA ALL (N) 0 0 2 12 55 440 1854 DISTALL ALL (P) 0.00 0.00 0.11 0.65 2.97 1854 DISTALL ALL (RMS) 0.00 0.00 2.75 3.92 7.02 DISTALL END of the results output