####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 109 ( 436), selected 109 , name T0555AL396_1-D1 # Molecule2: number of CA atoms 134 ( 2173), selected 109 , name T0555-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0555AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 44 - 79 4.99 29.16 LCS_AVERAGE: 21.03 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 61 - 76 1.75 32.03 LCS_AVERAGE: 7.60 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 61 - 74 0.75 31.00 LCS_AVERAGE: 6.08 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 109 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT R 12 R 12 3 3 13 0 3 3 3 3 7 7 7 7 10 11 11 12 13 13 16 17 17 19 19 LCS_GDT Q 13 Q 13 3 3 13 0 3 5 5 5 7 7 7 8 9 11 13 13 14 31 32 33 34 41 42 LCS_GDT K 14 K 14 3 3 13 0 3 3 4 4 7 7 16 19 23 25 28 29 30 33 37 38 39 41 44 LCS_GDT Y 15 Y 15 3 3 13 0 3 4 4 7 8 11 16 19 23 25 28 29 30 33 37 38 39 41 44 LCS_GDT A 16 A 16 3 4 13 3 4 4 4 4 9 11 15 16 19 23 25 29 29 31 32 33 36 40 42 LCS_GDT M 17 M 17 3 4 13 3 4 4 4 4 6 7 8 11 13 15 19 25 29 30 31 34 37 40 42 LCS_GDT K 18 K 18 4 5 13 3 4 4 4 7 7 8 9 11 13 15 19 25 29 30 31 33 35 38 41 LCS_GDT P 19 P 19 4 5 13 3 4 4 4 5 6 6 8 9 9 11 13 15 19 23 24 28 33 35 38 LCS_GDT G 20 G 20 4 5 13 3 4 4 4 5 6 6 8 9 11 13 13 17 19 23 24 27 33 33 38 LCS_GDT L 21 L 21 4 5 13 3 4 5 5 5 7 7 8 9 13 14 18 18 19 21 27 30 32 35 39 LCS_GDT S 22 S 22 4 5 13 3 4 5 5 5 7 7 8 8 11 11 13 13 18 20 23 25 30 32 34 LCS_GDT A 23 A 23 4 4 13 3 4 5 5 5 7 7 8 8 11 11 13 16 18 20 23 26 30 32 34 LCS_GDT L 24 L 24 4 4 13 3 4 5 5 5 9 9 9 13 16 18 18 19 22 24 27 29 32 34 38 LCS_GDT R 40 R 40 4 8 33 0 4 4 5 7 9 11 13 16 21 26 29 30 31 35 37 38 40 41 44 LCS_GDT D 41 D 41 4 8 33 3 4 4 5 7 9 12 14 18 23 26 29 30 31 35 37 38 40 41 44 LCS_GDT I 42 I 42 4 8 33 3 4 4 5 6 9 12 14 18 21 26 29 30 31 35 37 38 40 41 44 LCS_GDT T 43 T 43 5 9 33 4 5 5 6 9 13 16 18 20 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT K 44 K 44 5 10 34 4 5 5 6 10 13 16 19 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT A 45 A 45 5 10 34 4 5 5 5 10 12 16 19 22 25 26 29 30 31 35 36 38 40 41 44 LCS_GDT Y 46 Y 46 5 10 34 4 5 5 8 10 13 16 19 22 25 26 29 30 31 35 36 38 40 41 44 LCS_GDT S 47 S 47 7 10 34 6 7 9 9 10 13 16 19 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT Q 48 Q 48 7 10 34 6 7 9 9 10 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT S 49 S 49 7 10 34 6 7 9 9 10 13 17 18 20 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT I 50 I 50 7 10 34 6 7 9 9 10 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT S 51 S 51 7 10 34 6 7 9 9 12 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT Y 52 Y 52 7 10 34 6 7 9 9 14 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT L 53 L 53 7 10 34 6 7 9 10 14 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT E 54 E 54 6 9 34 2 5 8 9 12 13 13 14 17 23 24 28 29 31 35 37 38 40 41 44 LCS_GDT S 55 S 55 6 9 34 2 5 8 9 12 13 15 18 21 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT R 58 R 58 6 8 34 3 5 8 9 12 13 16 18 20 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT N 59 N 59 6 8 34 3 5 8 10 14 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT G 60 G 60 6 15 34 3 5 8 9 12 13 13 18 19 23 25 28 29 30 34 37 38 40 41 44 LCS_GDT D 61 D 61 14 16 34 3 13 14 15 15 15 16 17 18 23 24 26 29 31 34 37 38 40 41 44 LCS_GDT I 62 I 62 14 16 34 3 12 14 15 15 15 16 17 20 23 25 28 30 31 35 37 38 40 41 44 LCS_GDT S 63 S 63 14 16 34 5 10 14 15 15 15 18 20 21 24 26 29 30 31 35 37 38 40 41 44 LCS_GDT M 64 M 64 14 16 34 6 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT K 65 K 65 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT E 66 E 66 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT F 67 F 67 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT V 68 V 68 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT R 69 R 69 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT R 70 R 70 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT L 71 L 71 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT A 72 A 72 14 16 34 10 13 14 15 15 16 18 20 22 25 26 28 30 31 35 37 38 40 41 44 LCS_GDT K 73 K 73 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT S 74 S 74 14 16 34 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT P 75 P 75 6 16 34 5 6 6 7 12 13 16 17 18 21 25 28 28 30 35 37 38 39 41 44 LCS_GDT L 76 L 76 6 16 34 5 6 6 7 12 15 15 17 19 23 25 28 28 30 31 33 35 39 41 44 LCS_GDT Y 77 Y 77 6 6 34 5 6 8 9 12 13 18 20 21 23 25 28 30 31 35 37 38 40 41 44 LCS_GDT R 78 R 78 6 6 34 5 6 8 9 13 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 LCS_GDT K 79 K 79 6 6 34 7 13 14 15 15 16 18 19 21 23 25 28 29 30 35 37 38 40 41 44 LCS_GDT S 88 S 88 12 13 28 8 10 11 12 13 13 13 13 13 13 14 21 26 31 34 35 38 40 41 44 LCS_GDT R 89 R 89 12 13 21 8 10 11 12 13 13 13 13 13 16 21 26 30 31 34 36 38 40 41 44 LCS_GDT A 90 A 90 12 13 20 7 10 11 12 13 13 13 15 18 22 25 26 30 31 34 36 38 40 41 44 LCS_GDT L 91 L 91 12 13 20 8 10 11 12 13 13 13 13 15 18 22 26 30 31 34 36 38 40 41 44 LCS_GDT E 92 E 92 12 13 20 7 10 11 12 13 13 13 13 14 17 20 22 26 29 31 35 36 38 39 42 LCS_GDT L 93 L 93 12 13 20 8 10 11 12 13 13 13 13 14 18 20 22 26 29 32 35 37 39 40 42 LCS_GDT A 94 A 94 12 13 20 8 10 11 12 13 13 13 13 14 18 20 22 25 25 30 32 34 35 39 41 LCS_GDT F 95 F 95 12 13 20 8 10 11 12 13 13 13 13 15 18 21 25 28 30 32 33 34 36 37 39 LCS_GDT R 96 R 96 12 13 20 8 10 11 12 13 13 13 13 16 18 23 26 28 30 32 33 34 36 37 39 LCS_GDT H 97 H 97 12 13 20 8 10 11 12 13 13 13 13 14 18 23 26 28 30 32 33 34 36 37 39 LCS_GDT I 98 I 98 12 13 20 3 10 11 12 13 13 13 13 14 17 20 22 25 25 30 33 34 35 37 39 LCS_GDT L 99 L 99 12 13 20 3 6 8 12 13 13 13 13 13 17 22 26 27 30 32 33 34 36 37 39 LCS_GDT G 100 G 100 5 13 21 3 4 6 11 13 13 13 15 17 19 22 26 27 30 32 33 33 36 37 39 LCS_GDT R 101 R 101 3 5 21 3 4 5 5 6 6 8 14 17 18 20 23 23 26 28 31 33 36 37 39 LCS_GDT G 102 G 102 4 5 21 3 4 5 5 6 9 10 12 15 19 21 25 28 31 32 33 35 36 37 39 LCS_GDT P 103 P 103 4 5 31 3 4 5 5 6 8 10 11 15 19 21 25 28 31 32 33 35 36 37 39 LCS_GDT S 104 S 104 4 5 31 3 4 5 5 6 9 12 14 16 19 23 26 28 31 32 34 35 36 37 38 LCS_GDT S 105 S 105 4 5 31 3 4 5 5 6 9 12 14 19 21 24 26 28 31 32 34 35 36 37 38 LCS_GDT R 106 R 106 3 5 31 3 3 4 4 5 8 12 14 19 21 24 26 28 29 31 34 34 36 37 38 LCS_GDT E 107 E 107 3 15 31 1 3 4 7 12 14 15 16 19 22 24 26 28 30 32 34 35 36 37 38 LCS_GDT E 108 E 108 13 15 31 5 11 12 13 14 14 15 17 19 22 24 26 28 30 32 34 35 36 37 38 LCS_GDT V 109 V 109 13 15 31 5 11 12 13 14 14 15 17 18 21 23 25 27 28 32 34 35 35 37 38 LCS_GDT Q 110 Q 110 13 15 31 5 11 12 13 14 14 15 17 18 21 23 25 27 29 32 34 35 35 37 38 LCS_GDT K 111 K 111 13 15 31 5 11 12 13 14 14 15 17 18 22 24 26 28 30 32 34 35 36 37 38 LCS_GDT Y 112 Y 112 13 15 31 5 11 12 13 14 14 15 17 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT F 113 F 113 13 15 31 5 11 12 13 14 14 15 17 18 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT S 114 S 114 13 15 31 5 11 12 13 14 14 15 17 18 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT I 115 I 115 13 15 31 5 11 12 13 14 14 15 17 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT V 116 V 116 13 15 31 5 11 12 13 14 14 15 17 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT S 117 S 117 13 15 31 5 11 12 13 14 14 15 17 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT S 118 S 118 13 15 31 3 8 12 13 14 14 15 17 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT G 119 G 119 13 15 31 4 11 12 13 14 14 15 17 18 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT G 120 G 120 13 15 31 3 4 10 13 14 14 15 17 18 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT L 121 L 121 4 15 31 3 5 7 13 14 14 15 17 18 21 24 26 28 30 32 34 35 36 37 39 LCS_GDT P 122 P 122 3 4 31 0 4 4 5 8 12 13 17 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT A 123 A 123 3 9 31 1 4 5 5 8 10 13 16 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT L 124 L 124 8 9 31 6 8 9 10 10 12 13 15 17 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT V 125 V 125 8 9 31 6 8 9 10 10 12 13 16 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT D 126 D 126 8 9 31 6 8 9 10 10 12 13 15 19 21 24 26 28 31 32 34 35 36 37 39 LCS_GDT A 127 A 127 8 9 31 6 8 9 10 10 12 13 16 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT L 128 L 128 8 9 31 6 8 9 10 10 12 13 17 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT V 129 V 129 8 9 31 6 8 9 10 10 12 13 16 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT D 130 D 130 8 9 31 4 8 9 10 10 12 13 16 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT S 131 S 131 8 9 31 5 8 9 10 10 12 13 17 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT Q 132 Q 132 7 9 31 5 6 6 8 8 11 11 13 17 20 23 26 28 31 32 34 35 36 37 39 LCS_GDT E 133 E 133 7 7 31 5 6 6 8 8 12 13 16 19 22 24 26 28 31 32 34 35 36 37 39 LCS_GDT Y 134 Y 134 7 7 31 5 6 6 8 8 11 14 15 17 20 23 26 28 31 32 34 35 36 37 39 LCS_GDT A 135 A 135 7 7 31 5 6 6 8 8 10 12 14 17 19 23 26 28 31 32 34 35 36 37 39 LCS_GDT D 136 D 136 7 7 31 5 6 8 9 10 12 13 15 17 19 23 26 28 31 32 34 35 36 37 39 LCS_GDT Y 137 Y 137 7 7 31 3 4 6 10 10 12 13 15 17 20 23 26 28 31 32 34 35 36 37 39 LCS_GDT F 138 F 138 5 6 28 3 4 5 5 7 9 11 15 17 20 23 26 28 31 32 33 35 36 37 39 LCS_GDT G 139 G 139 5 6 27 3 6 9 10 10 12 13 15 17 20 23 26 28 31 32 33 35 36 37 39 LCS_GDT E 140 E 140 6 6 27 5 5 7 8 10 12 13 15 17 20 23 26 28 30 32 33 34 36 37 39 LCS_GDT E 141 E 141 6 6 27 5 5 5 6 7 7 8 10 14 18 23 26 28 30 32 33 34 36 37 39 LCS_GDT T 142 T 142 6 6 27 5 5 5 6 7 7 8 14 16 20 23 26 28 30 32 33 34 36 37 39 LCS_GDT V 143 V 143 6 6 27 5 5 5 6 7 7 8 10 13 20 23 25 27 30 32 33 34 36 37 39 LCS_GDT P 144 P 144 6 6 27 5 5 5 6 7 8 12 15 17 20 23 26 28 30 32 33 34 36 37 39 LCS_GDT Y 145 Y 145 6 6 27 3 3 5 6 7 7 12 15 17 20 23 26 28 30 32 33 34 36 37 39 LCS_AVERAGE LCS_A: 11.57 ( 6.08 7.60 21.03 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 14 15 15 16 18 20 22 25 26 29 30 31 35 37 38 40 41 44 GDT PERCENT_AT 7.46 9.70 10.45 11.19 11.19 11.94 13.43 14.93 16.42 18.66 19.40 21.64 22.39 23.13 26.12 27.61 28.36 29.85 30.60 32.84 GDT RMS_LOCAL 0.35 0.54 0.65 0.80 0.80 2.01 2.35 2.76 3.09 3.40 3.52 4.11 4.19 4.35 4.90 5.45 5.34 5.68 5.83 6.26 GDT RMS_ALL_AT 30.89 30.68 30.75 30.83 30.83 29.53 28.80 28.49 28.20 28.65 28.66 28.21 28.15 28.06 28.58 28.46 27.79 25.84 25.78 26.39 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA R 12 R 12 21.234 7 0.581 0.581 21.240 0.000 0.000 LGA Q 13 Q 13 16.213 5 0.634 0.634 17.688 0.000 0.000 LGA K 14 K 14 12.560 5 0.604 0.604 13.905 0.000 0.000 LGA Y 15 Y 15 11.783 8 0.522 0.522 14.211 0.000 0.000 LGA A 16 A 16 16.309 1 0.496 0.496 17.205 0.000 0.000 LGA M 17 M 17 16.669 4 0.596 0.596 20.162 0.000 0.000 LGA K 18 K 18 19.380 5 0.576 0.576 21.474 0.000 0.000 LGA P 19 P 19 24.428 3 0.598 0.598 27.116 0.000 0.000 LGA G 20 G 20 24.434 0 0.289 0.289 24.434 0.000 0.000 LGA L 21 L 21 21.373 4 0.502 0.502 24.303 0.000 0.000 LGA S 22 S 22 23.339 2 0.644 0.644 23.339 0.000 0.000 LGA A 23 A 23 22.207 1 0.536 0.536 22.636 0.000 0.000 LGA L 24 L 24 18.180 4 0.626 0.626 19.409 0.000 0.000 LGA R 40 R 40 12.468 7 0.347 0.347 13.073 0.000 0.000 LGA D 41 D 41 9.844 4 0.277 0.277 10.610 0.119 0.060 LGA I 42 I 42 11.729 4 0.050 0.050 11.729 0.714 0.357 LGA T 43 T 43 10.037 3 0.555 0.555 10.818 0.119 0.068 LGA K 44 K 44 8.225 5 0.221 0.221 8.479 7.500 3.333 LGA A 45 A 45 7.404 1 0.081 0.081 7.775 8.571 6.857 LGA Y 46 Y 46 8.436 8 0.540 0.540 8.436 8.214 2.738 LGA S 47 S 47 7.372 2 0.464 0.464 8.106 10.476 6.984 LGA Q 48 Q 48 3.209 5 0.232 0.232 4.288 54.286 24.127 LGA S 49 S 49 4.952 2 0.033 0.033 4.952 40.833 27.222 LGA I 50 I 50 3.953 4 0.035 0.035 4.102 48.690 24.345 LGA S 51 S 51 3.534 2 0.052 0.052 4.465 45.119 30.079 LGA Y 52 Y 52 3.139 8 0.064 0.064 5.119 49.762 16.587 LGA L 53 L 53 2.071 4 0.086 0.086 3.529 57.500 28.750 LGA E 54 E 54 8.575 5 0.049 0.049 9.800 5.833 2.593 LGA S 55 S 55 8.032 2 0.223 0.223 8.032 12.024 8.016 LGA R 58 R 58 7.409 7 0.353 0.353 7.409 12.619 4.589 LGA N 59 N 59 2.294 4 0.170 0.170 4.421 47.143 23.571 LGA G 60 G 60 7.379 0 0.229 0.229 10.005 10.833 10.833 LGA D 61 D 61 7.292 4 0.545 0.545 7.292 13.690 6.845 LGA I 62 I 62 6.430 4 0.178 0.178 6.578 18.333 9.167 LGA S 63 S 63 4.278 2 0.132 0.132 5.094 42.619 28.413 LGA M 64 M 64 1.444 4 0.152 0.152 1.822 86.190 43.095 LGA K 65 K 65 1.950 5 0.138 0.138 2.532 71.310 31.693 LGA E 66 E 66 2.888 5 0.040 0.040 2.888 62.857 27.937 LGA F 67 F 67 1.861 7 0.123 0.123 2.162 72.976 26.537 LGA V 68 V 68 1.931 3 0.081 0.081 2.421 72.976 41.701 LGA R 69 R 69 2.219 7 0.220 0.220 2.219 79.524 28.918 LGA R 70 R 70 1.653 7 0.107 0.107 1.653 77.143 28.052 LGA L 71 L 71 2.481 4 0.039 0.039 3.089 65.238 32.619 LGA A 72 A 72 2.294 1 0.113 0.113 2.294 70.833 56.667 LGA K 73 K 73 0.911 5 0.246 0.246 1.551 86.071 38.254 LGA S 74 S 74 2.322 2 0.584 0.584 3.433 63.810 42.540 LGA P 75 P 75 6.871 3 0.184 0.184 6.871 18.452 10.544 LGA L 76 L 76 7.965 4 0.016 0.016 7.965 13.690 6.845 LGA Y 77 Y 77 4.704 8 0.076 0.076 4.891 40.833 13.611 LGA R 78 R 78 2.794 7 0.060 0.060 3.037 63.333 23.030 LGA K 79 K 79 4.140 5 0.103 0.103 4.140 45.357 20.159 LGA S 88 S 88 12.970 2 0.034 0.034 14.731 0.000 0.000 LGA R 89 R 89 12.889 7 0.218 0.218 12.995 0.000 0.000 LGA A 90 A 90 9.262 1 0.028 0.028 12.062 0.476 0.381 LGA L 91 L 91 12.756 4 0.064 0.064 16.472 0.000 0.000 LGA E 92 E 92 18.350 5 0.311 0.311 20.715 0.000 0.000 LGA L 93 L 93 16.346 4 0.077 0.077 18.977 0.000 0.000 LGA A 94 A 94 17.977 1 0.049 0.049 22.645 0.000 0.000 LGA F 95 F 95 23.673 7 0.030 0.030 27.797 0.000 0.000 LGA R 96 R 96 26.302 7 0.107 0.107 28.660 0.000 0.000 LGA H 97 H 97 25.705 6 0.033 0.033 29.785 0.000 0.000 LGA I 98 I 98 30.389 4 0.030 0.030 35.015 0.000 0.000 LGA L 99 L 99 34.603 4 0.061 0.061 38.095 0.000 0.000 LGA G 100 G 100 34.790 0 0.198 0.198 34.972 0.000 0.000 LGA R 101 R 101 35.417 7 0.673 0.673 35.417 0.000 0.000 LGA G 102 G 102 33.825 0 0.652 0.652 34.748 0.000 0.000 LGA P 103 P 103 32.184 3 0.172 0.172 33.831 0.000 0.000 LGA S 104 S 104 38.118 2 0.104 0.104 39.160 0.000 0.000 LGA S 105 S 105 38.866 2 0.607 0.607 38.866 0.000 0.000 LGA R 106 R 106 39.132 7 0.595 0.595 39.461 0.000 0.000 LGA E 107 E 107 40.001 5 0.541 0.541 40.440 0.000 0.000 LGA E 108 E 108 41.844 5 0.565 0.565 41.844 0.000 0.000 LGA V 109 V 109 39.276 3 0.180 0.180 40.547 0.000 0.000 LGA Q 110 Q 110 38.525 5 0.039 0.039 39.112 0.000 0.000 LGA K 111 K 111 37.215 5 0.092 0.092 37.955 0.000 0.000 LGA Y 112 Y 112 33.882 8 0.092 0.092 35.362 0.000 0.000 LGA F 113 F 113 32.776 7 0.134 0.134 33.517 0.000 0.000 LGA S 114 S 114 32.100 2 0.082 0.082 32.696 0.000 0.000 LGA I 115 I 115 29.559 4 0.084 0.084 30.694 0.000 0.000 LGA V 116 V 116 27.170 3 0.072 0.072 28.048 0.000 0.000 LGA S 117 S 117 26.528 2 0.180 0.180 27.039 0.000 0.000 LGA S 118 S 118 26.474 2 0.179 0.179 26.497 0.000 0.000 LGA G 119 G 119 26.163 0 0.165 0.165 26.652 0.000 0.000 LGA G 120 G 120 26.815 0 0.715 0.715 30.598 0.000 0.000 LGA L 121 L 121 30.773 4 0.578 0.578 33.778 0.000 0.000 LGA P 122 P 122 36.201 3 0.578 0.578 39.145 0.000 0.000 LGA A 123 A 123 37.491 1 0.581 0.581 41.020 0.000 0.000 LGA L 124 L 124 41.800 4 0.668 0.668 42.376 0.000 0.000 LGA V 125 V 125 43.286 3 0.048 0.048 44.256 0.000 0.000 LGA D 126 D 126 45.765 4 0.074 0.074 46.049 0.000 0.000 LGA A 127 A 127 43.590 1 0.126 0.126 44.063 0.000 0.000 LGA L 128 L 128 42.900 4 0.071 0.071 44.368 0.000 0.000 LGA V 129 V 129 45.961 3 0.105 0.105 47.427 0.000 0.000 LGA D 130 D 130 46.713 4 0.141 0.141 46.713 0.000 0.000 LGA S 131 S 131 45.060 2 0.587 0.587 46.028 0.000 0.000 LGA Q 132 Q 132 48.996 5 0.201 0.201 49.950 0.000 0.000 LGA E 133 E 133 52.207 5 0.055 0.055 52.207 0.000 0.000 LGA Y 134 Y 134 48.088 8 0.053 0.053 49.302 0.000 0.000 LGA A 135 A 135 45.616 1 0.299 0.299 47.409 0.000 0.000 LGA D 136 D 136 51.383 4 0.617 0.617 54.201 0.000 0.000 LGA Y 137 Y 137 52.121 8 0.071 0.071 53.841 0.000 0.000 LGA F 138 F 138 50.941 7 0.155 0.155 53.089 0.000 0.000 LGA G 139 G 139 54.063 0 0.385 0.385 54.063 0.000 0.000 LGA E 140 E 140 52.147 5 0.067 0.067 52.791 0.000 0.000 LGA E 141 E 141 53.281 5 0.110 0.110 53.281 0.000 0.000 LGA T 142 T 142 48.977 3 0.199 0.199 50.577 0.000 0.000 LGA V 143 V 143 42.127 3 0.117 0.117 44.733 0.000 0.000 LGA P 144 P 144 36.828 3 0.299 0.299 38.502 0.000 0.000 LGA Y 145 Y 145 33.139 8 0.562 0.562 34.714 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 109 436 436 100.00 871 436 50.06 134 SUMMARY(RMSD_GDC): 16.746 16.627 16.627 11.090 5.508 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 109 134 4.0 20 2.76 15.858 13.510 0.698 LGA_LOCAL RMSD: 2.764 Number of atoms: 20 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 28.491 Number of assigned atoms: 109 Std_ASGN_ATOMS RMSD: 16.746 Standard rmsd on all 109 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.305542 * X + -0.828192 * Y + 0.469832 * Z + 13.292436 Y_new = -0.451835 * X + -0.308226 * Y + -0.837163 * Z + 28.464169 Z_new = 0.838146 * X + -0.468075 * Y + -0.280030 * Z + 37.408333 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.165387 -0.993875 -2.109935 [DEG: -124.0675 -56.9449 -120.8904 ] ZXZ: 0.511416 1.854622 2.080115 [DEG: 29.3020 106.2620 119.1818 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0555AL396_1-D1 REMARK 2: T0555-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0555AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 109 134 4.0 20 2.76 13.510 16.75 REMARK ---------------------------------------------------------- MOLECULE T0555AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 4cln ATOM 41 N ARG 12 -17.774 -5.206 -2.188 1.00 0.00 N ATOM 42 CA ARG 12 -18.268 -5.365 -0.813 1.00 0.00 C ATOM 43 C ARG 12 -18.246 -6.838 -0.505 1.00 0.00 C ATOM 44 O ARG 12 -17.898 -7.244 0.647 1.00 0.00 O ATOM 45 N GLN 13 -18.480 -7.611 -1.545 1.00 0.00 N ATOM 46 CA GLN 13 -18.448 -9.088 -1.364 1.00 0.00 C ATOM 47 C GLN 13 -17.034 -9.645 -1.200 1.00 0.00 C ATOM 48 O GLN 13 -16.853 -10.569 -0.349 1.00 0.00 O ATOM 49 N LYS 14 -15.985 -9.190 -1.792 1.00 0.00 N ATOM 50 CA LYS 14 -14.595 -9.647 -1.688 1.00 0.00 C ATOM 51 C LYS 14 -13.963 -9.172 -0.362 1.00 0.00 C ATOM 52 O LYS 14 -13.196 -9.867 0.336 1.00 0.00 O ATOM 53 N TYR 15 -14.353 -7.939 0.008 1.00 0.00 N ATOM 54 CA TYR 15 -13.964 -7.368 1.323 1.00 0.00 C ATOM 55 C TYR 15 -14.706 -8.356 2.228 1.00 0.00 C ATOM 56 O TYR 15 -14.116 -9.071 2.997 1.00 0.00 O ATOM 57 N ALA 16 -15.977 -8.473 1.983 1.00 0.00 N ATOM 58 CA ALA 16 -16.916 -9.381 2.632 1.00 0.00 C ATOM 59 C ALA 16 -16.171 -10.529 3.299 1.00 0.00 C ATOM 60 O ALA 16 -16.012 -10.598 4.515 1.00 0.00 O ATOM 61 N MET 17 -15.786 -11.456 2.474 1.00 0.00 N ATOM 62 CA MET 17 -15.101 -12.702 2.495 1.00 0.00 C ATOM 63 C MET 17 -13.751 -12.697 3.177 1.00 0.00 C ATOM 64 O MET 17 -13.446 -13.682 3.862 1.00 0.00 O ATOM 65 N LYS 18 -12.990 -11.625 3.041 1.00 0.00 N ATOM 66 CA LYS 18 -11.714 -11.480 3.750 1.00 0.00 C ATOM 67 C LYS 18 -11.984 -11.222 5.249 1.00 0.00 C ATOM 68 O LYS 18 -11.423 -11.861 6.175 1.00 0.00 O ATOM 69 N PRO 19 -12.893 -10.266 5.497 1.00 0.00 N ATOM 70 CA PRO 19 -13.208 -9.985 6.917 1.00 0.00 C ATOM 71 C PRO 19 -13.640 -11.307 7.547 1.00 0.00 C ATOM 72 O PRO 19 -13.440 -11.478 8.777 1.00 0.00 O ATOM 73 N GLY 20 -14.180 -12.170 6.674 1.00 0.00 N ATOM 74 CA GLY 20 -14.728 -13.445 7.244 1.00 0.00 C ATOM 75 C GLY 20 -13.782 -14.585 7.329 1.00 0.00 C ATOM 76 O GLY 20 -14.096 -15.574 8.031 1.00 0.00 O ATOM 77 N LEU 21 -12.594 -14.495 6.755 1.00 0.00 N ATOM 78 CA LEU 21 -11.539 -15.561 6.819 1.00 0.00 C ATOM 79 C LEU 21 -11.132 -15.530 8.337 1.00 0.00 C ATOM 80 O LEU 21 -11.465 -16.383 9.144 1.00 0.00 O ATOM 81 N SER 22 -10.455 -14.418 8.538 1.00 0.00 N ATOM 82 CA SER 22 -9.911 -13.815 9.689 1.00 0.00 C ATOM 83 C SER 22 -10.924 -13.764 10.858 1.00 0.00 C ATOM 84 O SER 22 -10.753 -12.858 11.734 1.00 0.00 O ATOM 85 N ALA 23 -11.902 -14.648 10.849 1.00 0.00 N ATOM 86 CA ALA 23 -12.939 -14.719 11.882 1.00 0.00 C ATOM 87 C ALA 23 -13.438 -13.336 12.289 1.00 0.00 C ATOM 88 O ALA 23 -13.049 -12.706 13.290 1.00 0.00 O ATOM 89 N LEU 24 -14.326 -12.828 11.465 1.00 0.00 N ATOM 90 CA LEU 24 -14.971 -11.519 11.668 1.00 0.00 C ATOM 91 C LEU 24 -16.129 -11.535 10.627 1.00 0.00 C ATOM 92 O LEU 24 -15.817 -11.318 9.457 1.00 0.00 O ATOM 93 N ARG 40 -17.277 -11.799 11.186 1.00 0.00 N ATOM 94 CA ARG 40 -18.538 -11.878 10.424 1.00 0.00 C ATOM 95 C ARG 40 -19.343 -10.577 10.566 1.00 0.00 C ATOM 96 O ARG 40 -20.148 -10.509 11.515 1.00 0.00 O ATOM 97 N ASP 41 -19.134 -9.678 9.621 1.00 0.00 N ATOM 98 CA ASP 41 -19.799 -8.379 9.588 1.00 0.00 C ATOM 99 C ASP 41 -21.120 -8.381 8.841 1.00 0.00 C ATOM 100 O ASP 41 -21.515 -9.378 8.221 1.00 0.00 O ATOM 101 N ILE 42 -21.649 -7.181 8.799 1.00 0.00 N ATOM 102 CA ILE 42 -22.899 -6.764 8.194 1.00 0.00 C ATOM 103 C ILE 42 -22.635 -5.712 7.105 1.00 0.00 C ATOM 104 O ILE 42 -21.678 -4.920 7.085 1.00 0.00 O ATOM 105 N THR 43 -23.624 -5.736 6.237 1.00 0.00 N ATOM 106 CA THR 43 -23.693 -4.910 5.048 1.00 0.00 C ATOM 107 C THR 43 -23.207 -3.496 5.270 1.00 0.00 C ATOM 108 O THR 43 -22.349 -3.016 4.490 1.00 0.00 O ATOM 109 N LYS 44 -23.805 -2.871 6.262 1.00 0.00 N ATOM 110 CA LYS 44 -23.489 -1.482 6.627 1.00 0.00 C ATOM 111 C LYS 44 -22.009 -1.239 6.866 1.00 0.00 C ATOM 112 O LYS 44 -21.423 -0.226 6.408 1.00 0.00 O ATOM 113 N ALA 45 -21.410 -2.174 7.575 1.00 0.00 N ATOM 114 CA ALA 45 -19.968 -2.048 7.954 1.00 0.00 C ATOM 115 C ALA 45 -19.115 -2.103 6.711 1.00 0.00 C ATOM 116 O ALA 45 -18.245 -1.250 6.528 1.00 0.00 O ATOM 117 N TYR 46 -19.425 -3.094 5.889 1.00 0.00 N ATOM 118 CA TYR 46 -18.748 -3.357 4.618 1.00 0.00 C ATOM 119 C TYR 46 -18.854 -2.105 3.776 1.00 0.00 C ATOM 120 O TYR 46 -17.919 -1.474 3.285 1.00 0.00 O ATOM 121 N SER 47 -20.176 -1.837 3.593 1.00 0.00 N ATOM 122 CA SER 47 -20.597 -0.675 2.811 1.00 0.00 C ATOM 123 C SER 47 -19.866 0.528 3.342 1.00 0.00 C ATOM 124 O SER 47 -19.249 1.278 2.531 1.00 0.00 O ATOM 125 N GLN 48 -19.877 0.714 4.648 1.00 0.00 N ATOM 126 CA GLN 48 -19.106 1.848 5.274 1.00 0.00 C ATOM 127 C GLN 48 -17.596 1.716 5.064 1.00 0.00 C ATOM 128 O GLN 48 -16.828 2.660 4.817 1.00 0.00 O ATOM 129 N SER 49 -17.126 0.453 5.131 1.00 0.00 N ATOM 130 CA SER 49 -15.660 0.289 4.941 1.00 0.00 C ATOM 131 C SER 49 -15.301 0.664 3.517 1.00 0.00 C ATOM 132 O SER 49 -14.160 1.189 3.328 1.00 0.00 O ATOM 133 N ILE 50 -16.209 0.431 2.556 1.00 0.00 N ATOM 134 CA ILE 50 -15.826 0.804 1.154 1.00 0.00 C ATOM 135 C ILE 50 -15.965 2.292 0.895 1.00 0.00 C ATOM 136 O ILE 50 -15.132 2.926 0.225 1.00 0.00 O ATOM 137 N SER 51 -17.041 2.872 1.397 1.00 0.00 N ATOM 138 CA SER 51 -17.366 4.314 1.196 1.00 0.00 C ATOM 139 C SER 51 -16.122 5.179 1.344 1.00 0.00 C ATOM 140 O SER 51 -15.779 6.093 0.593 1.00 0.00 O ATOM 141 N TYR 52 -15.429 4.833 2.354 1.00 0.00 N ATOM 142 CA TYR 52 -14.239 5.115 3.087 1.00 0.00 C ATOM 143 C TYR 52 -12.986 5.198 2.274 1.00 0.00 C ATOM 144 O TYR 52 -12.254 6.214 2.282 1.00 0.00 O ATOM 145 N LEU 53 -12.688 4.191 1.503 1.00 0.00 N ATOM 146 CA LEU 53 -11.635 3.971 0.571 1.00 0.00 C ATOM 147 C LEU 53 -12.021 4.402 -0.872 1.00 0.00 C ATOM 148 O LEU 53 -11.018 4.657 -1.571 1.00 0.00 O ATOM 149 N GLU 54 -12.755 6.742 -3.204 1.00 0.00 N ATOM 150 CA GLU 54 -12.400 8.139 -3.355 1.00 0.00 C ATOM 151 C GLU 54 -13.342 8.859 -4.297 1.00 0.00 C ATOM 152 O GLU 54 -13.827 9.959 -3.985 1.00 0.00 O ATOM 153 N SER 55 -13.511 8.160 -5.398 1.00 0.00 N ATOM 154 CA SER 55 -14.301 8.567 -6.549 1.00 0.00 C ATOM 155 C SER 55 -15.689 7.994 -6.714 1.00 0.00 C ATOM 156 O SER 55 -16.380 8.306 -7.730 1.00 0.00 O ATOM 157 N ARG 58 -16.204 7.210 -5.802 1.00 0.00 N ATOM 158 CA ARG 58 -17.499 6.642 -5.759 1.00 0.00 C ATOM 159 C ARG 58 -18.032 5.739 -6.809 1.00 0.00 C ATOM 160 O ARG 58 -19.282 5.624 -7.018 1.00 0.00 O ATOM 161 N ASN 59 -17.246 4.993 -7.560 1.00 0.00 N ATOM 162 CA ASN 59 -17.877 4.027 -8.492 1.00 0.00 C ATOM 163 C ASN 59 -18.255 2.804 -7.647 1.00 0.00 C ATOM 164 O ASN 59 -18.638 1.744 -8.236 1.00 0.00 O ATOM 165 N GLY 60 -18.200 2.874 -6.336 1.00 0.00 N ATOM 166 CA GLY 60 -18.616 1.643 -5.566 1.00 0.00 C ATOM 167 C GLY 60 -17.505 0.613 -5.369 1.00 0.00 C ATOM 168 O GLY 60 -17.561 -0.278 -4.480 1.00 0.00 O ATOM 169 N ASP 61 -16.457 0.735 -6.198 1.00 0.00 N ATOM 170 CA ASP 61 -15.271 -0.044 -6.097 1.00 0.00 C ATOM 171 C ASP 61 -14.031 0.832 -5.717 1.00 0.00 C ATOM 172 O ASP 61 -13.897 2.057 -5.887 1.00 0.00 O ATOM 173 N ILE 62 -13.080 -0.042 -5.373 1.00 0.00 N ATOM 174 CA ILE 62 -11.701 0.252 -5.006 1.00 0.00 C ATOM 175 C ILE 62 -10.734 -0.426 -5.961 1.00 0.00 C ATOM 176 O ILE 62 -10.596 -1.648 -6.043 1.00 0.00 O ATOM 177 N SER 63 -9.989 0.374 -6.713 1.00 0.00 N ATOM 178 CA SER 63 -8.938 -0.089 -7.627 1.00 0.00 C ATOM 179 C SER 63 -7.617 -0.081 -6.804 1.00 0.00 C ATOM 180 O SER 63 -7.620 0.221 -5.613 1.00 0.00 O ATOM 181 N MET 64 -6.532 -0.392 -7.513 1.00 0.00 N ATOM 182 CA MET 64 -5.217 -0.384 -6.931 1.00 0.00 C ATOM 183 C MET 64 -4.807 0.920 -6.236 1.00 0.00 C ATOM 184 O MET 64 -4.311 0.855 -5.080 1.00 0.00 O ATOM 185 N LYS 65 -4.892 2.062 -6.875 1.00 0.00 N ATOM 186 CA LYS 65 -4.514 3.335 -6.332 1.00 0.00 C ATOM 187 C LYS 65 -5.199 3.910 -5.106 1.00 0.00 C ATOM 188 O LYS 65 -4.549 4.729 -4.385 1.00 0.00 O ATOM 189 N GLU 66 -6.430 3.686 -4.822 1.00 0.00 N ATOM 190 CA GLU 66 -7.272 4.134 -3.726 1.00 0.00 C ATOM 191 C GLU 66 -6.960 3.343 -2.454 1.00 0.00 C ATOM 192 O GLU 66 -7.096 3.858 -1.320 1.00 0.00 O ATOM 193 N PHE 67 -6.510 2.123 -2.719 1.00 0.00 N ATOM 194 CA PHE 67 -6.100 1.113 -1.765 1.00 0.00 C ATOM 195 C PHE 67 -4.671 1.381 -1.237 1.00 0.00 C ATOM 196 O PHE 67 -4.231 1.040 -0.137 1.00 0.00 O ATOM 197 N VAL 68 -3.906 1.832 -2.206 1.00 0.00 N ATOM 198 CA VAL 68 -2.484 2.083 -1.987 1.00 0.00 C ATOM 199 C VAL 68 -2.356 3.373 -1.189 1.00 0.00 C ATOM 200 O VAL 68 -1.386 3.420 -0.395 1.00 0.00 O ATOM 201 N ARG 69 -3.325 4.262 -1.397 1.00 0.00 N ATOM 202 CA ARG 69 -3.385 5.538 -0.669 1.00 0.00 C ATOM 203 C ARG 69 -3.571 5.174 0.830 1.00 0.00 C ATOM 204 O ARG 69 -2.661 5.326 1.639 1.00 0.00 O ATOM 205 N ARG 70 -4.763 4.695 1.119 1.00 0.00 N ATOM 206 CA ARG 70 -5.264 4.201 2.392 1.00 0.00 C ATOM 207 C ARG 70 -4.160 3.376 3.069 1.00 0.00 C ATOM 208 O ARG 70 -3.643 3.805 4.075 1.00 0.00 O ATOM 209 N LEU 71 -3.829 2.243 2.488 1.00 0.00 N ATOM 210 CA LEU 71 -2.851 1.257 2.860 1.00 0.00 C ATOM 211 C LEU 71 -1.577 1.904 3.405 1.00 0.00 C ATOM 212 O LEU 71 -1.031 1.369 4.369 1.00 0.00 O ATOM 213 N ALA 72 -1.208 3.006 2.760 1.00 0.00 N ATOM 214 CA ALA 72 -0.030 3.800 3.116 1.00 0.00 C ATOM 215 C ALA 72 -0.343 4.791 4.248 1.00 0.00 C ATOM 216 O ALA 72 0.403 4.920 5.250 1.00 0.00 O ATOM 217 N LYS 73 -1.440 5.514 4.019 1.00 0.00 N ATOM 218 CA LYS 73 -1.894 6.508 5.005 1.00 0.00 C ATOM 219 C LYS 73 -1.991 5.836 6.388 1.00 0.00 C ATOM 220 O LYS 73 -1.548 6.362 7.395 1.00 0.00 O ATOM 221 N SER 74 -2.604 4.686 6.365 1.00 0.00 N ATOM 222 CA SER 74 -2.894 3.836 7.511 1.00 0.00 C ATOM 223 C SER 74 -1.692 2.997 7.826 1.00 0.00 C ATOM 224 O SER 74 -1.780 1.985 8.520 1.00 0.00 O ATOM 225 N PRO 75 -0.628 3.449 7.215 1.00 0.00 N ATOM 226 CA PRO 75 0.691 2.793 7.364 1.00 0.00 C ATOM 227 C PRO 75 1.439 3.666 8.363 1.00 0.00 C ATOM 228 O PRO 75 1.891 3.199 9.412 1.00 0.00 O ATOM 229 N LEU 76 1.466 4.939 7.994 1.00 0.00 N ATOM 230 CA LEU 76 2.120 5.923 8.871 1.00 0.00 C ATOM 231 C LEU 76 1.592 5.716 10.306 1.00 0.00 C ATOM 232 O LEU 76 2.370 5.446 11.240 1.00 0.00 O ATOM 233 N TYR 77 0.276 5.830 10.351 1.00 0.00 N ATOM 234 CA TYR 77 -0.558 5.757 11.522 1.00 0.00 C ATOM 235 C TYR 77 -0.319 4.491 12.353 1.00 0.00 C ATOM 236 O TYR 77 -0.574 4.555 13.576 1.00 0.00 O ATOM 237 N ARG 78 0.002 3.379 11.735 1.00 0.00 N ATOM 238 CA ARG 78 0.142 2.139 12.584 1.00 0.00 C ATOM 239 C ARG 78 1.464 2.240 13.318 1.00 0.00 C ATOM 240 O ARG 78 1.746 1.700 14.396 1.00 0.00 O ATOM 241 N LYS 79 2.265 3.107 12.697 1.00 0.00 N ATOM 242 CA LYS 79 3.598 3.453 13.203 1.00 0.00 C ATOM 243 C LYS 79 3.431 4.525 14.275 1.00 0.00 C ATOM 244 O LYS 79 3.628 4.229 15.482 1.00 0.00 O ATOM 245 N SER 88 2.977 5.703 13.899 1.00 0.00 N ATOM 246 CA SER 88 2.796 6.756 14.940 1.00 0.00 C ATOM 247 C SER 88 2.101 6.136 16.133 1.00 0.00 C ATOM 248 O SER 88 2.298 6.504 17.306 1.00 0.00 O ATOM 249 N ARG 89 1.319 5.058 15.889 1.00 0.00 N ATOM 250 CA ARG 89 0.654 4.407 17.038 1.00 0.00 C ATOM 251 C ARG 89 1.736 3.983 18.056 1.00 0.00 C ATOM 252 O ARG 89 1.963 4.666 19.054 1.00 0.00 O ATOM 253 N ALA 90 2.303 2.851 17.783 1.00 0.00 N ATOM 254 CA ALA 90 3.366 2.089 18.359 1.00 0.00 C ATOM 255 C ALA 90 4.474 3.063 18.817 1.00 0.00 C ATOM 256 O ALA 90 5.210 2.813 19.789 1.00 0.00 O ATOM 257 N LEU 91 4.574 4.146 18.015 1.00 0.00 N ATOM 258 CA LEU 91 5.545 5.166 18.368 1.00 0.00 C ATOM 259 C LEU 91 5.262 5.575 19.828 1.00 0.00 C ATOM 260 O LEU 91 6.154 5.380 20.680 1.00 0.00 O ATOM 261 N GLU 92 4.043 6.097 20.004 1.00 0.00 N ATOM 262 CA GLU 92 3.680 6.511 21.361 1.00 0.00 C ATOM 263 C GLU 92 3.235 5.387 22.257 1.00 0.00 C ATOM 264 O GLU 92 2.641 5.676 23.304 1.00 0.00 O ATOM 265 N LEU 93 3.523 4.184 21.887 1.00 0.00 N ATOM 266 CA LEU 93 3.273 2.946 22.628 1.00 0.00 C ATOM 267 C LEU 93 4.643 2.494 23.244 1.00 0.00 C ATOM 268 O LEU 93 4.666 1.852 24.280 1.00 0.00 O ATOM 269 N ALA 94 5.716 2.718 22.505 1.00 0.00 N ATOM 270 CA ALA 94 7.022 2.285 23.069 1.00 0.00 C ATOM 271 C ALA 94 7.312 3.176 24.285 1.00 0.00 C ATOM 272 O ALA 94 7.772 2.709 25.320 1.00 0.00 O ATOM 273 N PHE 95 6.946 4.400 24.129 1.00 0.00 N ATOM 274 CA PHE 95 7.068 5.523 25.027 1.00 0.00 C ATOM 275 C PHE 95 6.425 5.258 26.365 1.00 0.00 C ATOM 276 O PHE 95 7.059 5.470 27.466 1.00 0.00 O ATOM 277 N ARG 96 5.158 4.864 26.247 1.00 0.00 N ATOM 278 CA ARG 96 4.365 4.520 27.449 1.00 0.00 C ATOM 279 C ARG 96 5.010 3.310 28.087 1.00 0.00 C ATOM 280 O ARG 96 4.719 2.902 29.233 1.00 0.00 O ATOM 281 N HIS 97 5.800 2.648 27.286 1.00 0.00 N ATOM 282 CA HIS 97 6.367 1.335 27.737 1.00 0.00 C ATOM 283 C HIS 97 7.489 1.532 28.704 1.00 0.00 C ATOM 284 O HIS 97 7.534 0.724 29.643 1.00 0.00 O ATOM 285 N ILE 98 8.247 2.611 28.533 1.00 0.00 N ATOM 286 CA ILE 98 9.329 2.894 29.521 1.00 0.00 C ATOM 287 C ILE 98 8.748 3.639 30.730 1.00 0.00 C ATOM 288 O ILE 98 8.964 3.283 31.909 1.00 0.00 O ATOM 289 N LEU 99 7.903 4.596 30.390 1.00 0.00 N ATOM 290 CA LEU 99 7.198 5.408 31.370 1.00 0.00 C ATOM 291 C LEU 99 6.470 4.492 32.354 1.00 0.00 C ATOM 292 O LEU 99 6.362 4.785 33.557 1.00 0.00 O ATOM 293 N GLY 100 6.046 3.333 31.865 1.00 0.00 N ATOM 294 CA GLY 100 5.308 2.391 32.734 1.00 0.00 C ATOM 295 C GLY 100 6.106 1.271 33.351 1.00 0.00 C ATOM 296 O GLY 100 5.646 0.117 33.419 1.00 0.00 O ATOM 297 N ARG 101 7.281 1.631 33.830 1.00 0.00 N ATOM 298 CA ARG 101 8.263 0.768 34.476 1.00 0.00 C ATOM 299 C ARG 101 7.790 -0.547 35.046 1.00 0.00 C ATOM 300 O ARG 101 8.556 -1.534 35.055 1.00 0.00 O ATOM 301 N GLY 102 6.571 -0.576 35.536 1.00 0.00 N ATOM 302 CA GLY 102 6.020 -1.840 36.128 1.00 0.00 C ATOM 303 C GLY 102 5.064 -2.440 35.102 1.00 0.00 C ATOM 304 O GLY 102 4.771 -3.650 35.102 1.00 0.00 O ATOM 305 N PRO 103 4.657 -1.537 34.206 1.00 0.00 N ATOM 306 CA PRO 103 3.717 -2.040 33.145 1.00 0.00 C ATOM 307 C PRO 103 2.771 -2.958 33.951 1.00 0.00 C ATOM 308 O PRO 103 2.827 -4.184 33.993 1.00 0.00 O ATOM 309 N SER 104 1.966 -2.230 34.666 1.00 0.00 N ATOM 310 CA SER 104 0.914 -2.834 35.520 1.00 0.00 C ATOM 311 C SER 104 -0.348 -2.573 34.638 1.00 0.00 C ATOM 312 O SER 104 -1.301 -3.307 34.713 1.00 0.00 O ATOM 313 N SER 105 -0.144 -1.568 33.809 1.00 0.00 N ATOM 314 CA SER 105 -1.001 -0.999 32.851 1.00 0.00 C ATOM 315 C SER 105 -0.992 0.523 32.767 1.00 0.00 C ATOM 316 O SER 105 -0.936 1.101 31.653 1.00 0.00 O ATOM 317 N ARG 106 -1.097 1.149 33.922 1.00 0.00 N ATOM 318 CA ARG 106 -1.150 2.589 34.157 1.00 0.00 C ATOM 319 C ARG 106 0.149 3.091 34.832 1.00 0.00 C ATOM 320 O ARG 106 0.769 2.374 35.626 1.00 0.00 O ATOM 321 N GLU 107 0.432 4.360 34.538 1.00 0.00 N ATOM 322 CA GLU 107 1.571 5.101 35.070 1.00 0.00 C ATOM 323 C GLU 107 1.290 5.988 36.275 1.00 0.00 C ATOM 324 O GLU 107 0.577 7.011 36.302 1.00 0.00 O ATOM 325 N GLU 108 1.927 5.570 37.377 1.00 0.00 N ATOM 326 CA GLU 108 1.818 6.288 38.669 1.00 0.00 C ATOM 327 C GLU 108 2.590 7.599 38.486 1.00 0.00 C ATOM 328 O GLU 108 3.106 7.818 37.372 1.00 0.00 O ATOM 329 N VAL 109 2.623 8.390 39.520 1.00 0.00 N ATOM 330 CA VAL 109 3.248 9.692 39.667 1.00 0.00 C ATOM 331 C VAL 109 4.750 9.638 39.999 1.00 0.00 C ATOM 332 O VAL 109 5.536 10.525 39.677 1.00 0.00 O ATOM 333 N GLN 110 5.036 8.601 40.739 1.00 0.00 N ATOM 334 CA GLN 110 6.278 8.147 41.268 1.00 0.00 C ATOM 335 C GLN 110 7.151 7.597 40.146 1.00 0.00 C ATOM 336 O GLN 110 8.365 7.684 40.179 1.00 0.00 O ATOM 337 N LYS 111 6.488 7.038 39.145 1.00 0.00 N ATOM 338 CA LYS 111 7.078 6.453 37.945 1.00 0.00 C ATOM 339 C LYS 111 7.472 7.572 36.986 1.00 0.00 C ATOM 340 O LYS 111 8.512 7.451 36.361 1.00 0.00 O ATOM 341 N TYR 112 6.644 8.596 36.857 1.00 0.00 N ATOM 342 CA TYR 112 6.898 9.755 35.975 1.00 0.00 C ATOM 343 C TYR 112 8.167 10.475 36.469 1.00 0.00 C ATOM 344 O TYR 112 9.027 10.943 35.732 1.00 0.00 O ATOM 345 N PHE 113 8.182 10.624 37.778 1.00 0.00 N ATOM 346 CA PHE 113 9.245 11.246 38.593 1.00 0.00 C ATOM 347 C PHE 113 10.469 10.361 38.398 1.00 0.00 C ATOM 348 O PHE 113 11.512 10.839 37.913 1.00 0.00 O ATOM 349 N SER 114 10.373 9.044 38.602 1.00 0.00 N ATOM 350 CA SER 114 11.512 8.165 38.351 1.00 0.00 C ATOM 351 C SER 114 12.082 8.461 36.948 1.00 0.00 C ATOM 352 O SER 114 13.298 8.730 36.798 1.00 0.00 O ATOM 353 N ILE 115 11.205 8.365 35.962 1.00 0.00 N ATOM 354 CA ILE 115 11.657 8.604 34.591 1.00 0.00 C ATOM 355 C ILE 115 12.298 9.975 34.443 1.00 0.00 C ATOM 356 O ILE 115 13.487 10.029 34.129 1.00 0.00 O ATOM 357 N VAL 116 11.500 11.003 34.593 1.00 0.00 N ATOM 358 CA VAL 116 11.824 12.408 34.467 1.00 0.00 C ATOM 359 C VAL 116 13.195 12.759 35.027 1.00 0.00 C ATOM 360 O VAL 116 13.876 13.662 34.516 1.00 0.00 O ATOM 361 N SER 117 13.544 12.012 36.034 1.00 0.00 N ATOM 362 CA SER 117 14.807 12.160 36.745 1.00 0.00 C ATOM 363 C SER 117 15.769 11.053 36.321 1.00 0.00 C ATOM 364 O SER 117 16.923 11.039 36.751 1.00 0.00 O ATOM 365 N SER 118 15.190 10.139 35.566 1.00 0.00 N ATOM 366 CA SER 118 15.982 9.026 35.023 1.00 0.00 C ATOM 367 C SER 118 16.683 9.580 33.775 1.00 0.00 C ATOM 368 O SER 118 17.769 9.114 33.396 1.00 0.00 O ATOM 369 N GLY 119 16.095 10.653 33.286 1.00 0.00 N ATOM 370 CA GLY 119 16.425 11.468 32.171 1.00 0.00 C ATOM 371 C GLY 119 17.169 12.750 32.497 1.00 0.00 C ATOM 372 O GLY 119 18.294 12.954 31.966 1.00 0.00 O ATOM 373 N GLY 120 16.512 13.632 33.261 1.00 0.00 N ATOM 374 CA GLY 120 17.164 14.896 33.551 1.00 0.00 C ATOM 375 C GLY 120 16.611 16.002 34.369 1.00 0.00 C ATOM 376 O GLY 120 17.368 16.977 34.675 1.00 0.00 O ATOM 377 N LEU 121 15.353 15.963 34.753 1.00 0.00 N ATOM 378 CA LEU 121 14.704 17.008 35.572 1.00 0.00 C ATOM 379 C LEU 121 14.273 16.460 36.933 1.00 0.00 C ATOM 380 O LEU 121 14.008 15.258 37.115 1.00 0.00 O ATOM 381 N PRO 122 14.226 17.394 37.887 1.00 0.00 N ATOM 382 CA PRO 122 13.892 17.123 39.272 1.00 0.00 C ATOM 383 C PRO 122 12.682 17.961 39.723 1.00 0.00 C ATOM 384 O PRO 122 12.751 19.169 40.016 1.00 0.00 O ATOM 385 N ALA 123 11.600 17.163 39.785 1.00 0.00 N ATOM 386 CA ALA 123 10.330 17.682 40.245 1.00 0.00 C ATOM 387 C ALA 123 10.045 17.207 41.672 1.00 0.00 C ATOM 388 O ALA 123 10.305 16.107 42.185 1.00 0.00 O ATOM 389 N LEU 124 9.408 18.170 42.336 1.00 0.00 N ATOM 390 CA LEU 124 8.882 17.882 43.693 1.00 0.00 C ATOM 391 C LEU 124 7.654 17.033 43.421 1.00 0.00 C ATOM 392 O LEU 124 7.291 16.989 42.215 1.00 0.00 O ATOM 393 N VAL 125 7.101 16.340 44.381 1.00 0.00 N ATOM 394 CA VAL 125 5.910 15.515 44.176 1.00 0.00 C ATOM 395 C VAL 125 4.773 16.375 43.592 1.00 0.00 C ATOM 396 O VAL 125 4.065 16.033 42.645 1.00 0.00 O ATOM 397 N ASP 126 4.599 17.506 44.219 1.00 0.00 N ATOM 398 CA ASP 126 3.617 18.525 43.940 1.00 0.00 C ATOM 399 C ASP 126 3.470 18.758 42.435 1.00 0.00 C ATOM 400 O ASP 126 2.330 18.701 41.927 1.00 0.00 O ATOM 401 N ALA 127 4.565 18.953 41.782 1.00 0.00 N ATOM 402 CA ALA 127 4.824 19.256 40.392 1.00 0.00 C ATOM 403 C ALA 127 4.635 18.089 39.413 1.00 0.00 C ATOM 404 O ALA 127 4.434 18.174 38.167 1.00 0.00 O ATOM 405 N LEU 128 4.679 16.916 40.021 1.00 0.00 N ATOM 406 CA LEU 128 4.440 15.641 39.256 1.00 0.00 C ATOM 407 C LEU 128 2.947 15.367 39.395 1.00 0.00 C ATOM 408 O LEU 128 2.168 14.993 38.493 1.00 0.00 O ATOM 409 N VAL 129 2.420 15.547 40.587 1.00 0.00 N ATOM 410 CA VAL 129 1.010 15.329 40.886 1.00 0.00 C ATOM 411 C VAL 129 0.128 16.257 40.031 1.00 0.00 C ATOM 412 O VAL 129 -1.045 15.938 39.708 1.00 0.00 O ATOM 413 N ASP 130 0.733 17.378 39.764 1.00 0.00 N ATOM 414 CA ASP 130 0.159 18.482 39.000 1.00 0.00 C ATOM 415 C ASP 130 0.226 18.160 37.529 1.00 0.00 C ATOM 416 O ASP 130 -0.509 18.660 36.657 1.00 0.00 O ATOM 417 N SER 131 1.082 17.217 37.258 1.00 0.00 N ATOM 418 CA SER 131 1.389 16.667 35.920 1.00 0.00 C ATOM 419 C SER 131 0.281 15.656 35.563 1.00 0.00 C ATOM 420 O SER 131 -0.270 15.693 34.461 1.00 0.00 O ATOM 421 N GLN 132 0.085 14.828 36.567 1.00 0.00 N ATOM 422 CA GLN 132 -0.858 13.747 36.602 1.00 0.00 C ATOM 423 C GLN 132 -2.266 14.249 36.360 1.00 0.00 C ATOM 424 O GLN 132 -2.876 13.958 35.318 1.00 0.00 O ATOM 425 N GLU 133 -2.731 14.999 37.334 1.00 0.00 N ATOM 426 CA GLU 133 -4.091 15.565 37.377 1.00 0.00 C ATOM 427 C GLU 133 -4.532 16.110 36.040 1.00 0.00 C ATOM 428 O GLU 133 -5.629 15.770 35.589 1.00 0.00 O ATOM 429 N TYR 134 -3.706 16.959 35.468 1.00 0.00 N ATOM 430 CA TYR 134 -3.944 17.556 34.161 1.00 0.00 C ATOM 431 C TYR 134 -4.224 16.521 33.058 1.00 0.00 C ATOM 432 O TYR 134 -4.934 16.704 32.023 1.00 0.00 O ATOM 433 N ALA 135 -3.643 15.336 33.296 1.00 0.00 N ATOM 434 CA ALA 135 -3.764 14.231 32.329 1.00 0.00 C ATOM 435 C ALA 135 -4.650 13.103 32.801 1.00 0.00 C ATOM 436 O ALA 135 -4.896 12.157 32.011 1.00 0.00 O ATOM 437 N ASP 136 -5.163 13.218 34.013 1.00 0.00 N ATOM 438 CA ASP 136 -6.059 12.172 34.553 1.00 0.00 C ATOM 439 C ASP 136 -7.508 12.624 34.290 1.00 0.00 C ATOM 440 O ASP 136 -8.005 13.601 34.876 1.00 0.00 O ATOM 441 N TYR 137 -8.141 11.941 33.368 1.00 0.00 N ATOM 442 CA TYR 137 -9.532 12.202 32.929 1.00 0.00 C ATOM 443 C TYR 137 -10.491 11.242 33.579 1.00 0.00 C ATOM 444 O TYR 137 -11.608 11.629 33.882 1.00 0.00 O ATOM 445 N PHE 138 -10.064 10.043 33.909 1.00 0.00 N ATOM 446 CA PHE 138 -10.944 9.077 34.589 1.00 0.00 C ATOM 447 C PHE 138 -10.746 9.253 36.097 1.00 0.00 C ATOM 448 O PHE 138 -11.343 8.524 36.899 1.00 0.00 O ATOM 449 N GLY 139 -9.948 10.263 36.404 1.00 0.00 N ATOM 450 CA GLY 139 -9.635 10.699 37.778 1.00 0.00 C ATOM 451 C GLY 139 -9.476 9.505 38.708 1.00 0.00 C ATOM 452 O GLY 139 -10.209 9.338 39.701 1.00 0.00 O ATOM 453 N GLU 140 -8.504 8.684 38.359 1.00 0.00 N ATOM 454 CA GLU 140 -8.183 7.463 39.122 1.00 0.00 C ATOM 455 C GLU 140 -6.832 7.710 39.783 1.00 0.00 C ATOM 456 O GLU 140 -6.406 6.878 40.583 1.00 0.00 O ATOM 457 N GLU 141 -6.237 8.817 39.385 1.00 0.00 N ATOM 458 CA GLU 141 -4.938 9.215 39.919 1.00 0.00 C ATOM 459 C GLU 141 -3.717 8.749 39.143 1.00 0.00 C ATOM 460 O GLU 141 -2.656 9.349 39.371 1.00 0.00 O ATOM 461 N THR 142 -3.867 7.759 38.286 1.00 0.00 N ATOM 462 CA THR 142 -2.879 7.123 37.417 1.00 0.00 C ATOM 463 C THR 142 -3.017 7.601 35.985 1.00 0.00 C ATOM 464 O THR 142 -3.884 8.456 35.673 1.00 0.00 O ATOM 465 N VAL 143 -2.208 7.085 35.094 1.00 0.00 N ATOM 466 CA VAL 143 -2.309 7.565 33.690 1.00 0.00 C ATOM 467 C VAL 143 -2.234 6.410 32.720 1.00 0.00 C ATOM 468 O VAL 143 -1.190 5.769 32.570 1.00 0.00 O ATOM 469 N PRO 144 -3.336 6.199 32.056 1.00 0.00 N ATOM 470 CA PRO 144 -3.621 5.129 31.093 1.00 0.00 C ATOM 471 C PRO 144 -3.201 5.511 29.687 1.00 0.00 C ATOM 472 O PRO 144 -3.140 6.713 29.327 1.00 0.00 O ATOM 473 N TYR 145 -2.929 4.466 28.883 1.00 0.00 N ATOM 474 CA TYR 145 -2.464 4.687 27.497 1.00 0.00 C ATOM 475 C TYR 145 -3.179 5.893 26.870 1.00 0.00 C ATOM 476 O TYR 145 -2.599 6.848 26.342 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 436 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 71.19 54.8 210 78.9 266 ARMSMC SECONDARY STRUCTURE . . 50.45 73.0 111 74.0 150 ARMSMC SURFACE . . . . . . . . 74.32 49.3 144 80.0 180 ARMSMC BURIED . . . . . . . . 63.81 66.7 66 76.7 86 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 115 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 107 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 66 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 79 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 36 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 91 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 76 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 52 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 63 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 40 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 33 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 24 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 36 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 20 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 13 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 20 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 16.75 (Number of atoms: 109) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 16.75 109 81.3 134 CRMSCA CRN = ALL/NP . . . . . 0.1536 CRMSCA SECONDARY STRUCTURE . . 15.16 58 77.3 75 CRMSCA SURFACE . . . . . . . . 17.10 76 83.5 91 CRMSCA BURIED . . . . . . . . 15.90 33 76.7 43 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 16.63 436 65.8 663 CRMSMC SECONDARY STRUCTURE . . 15.08 232 61.9 375 CRMSMC SURFACE . . . . . . . . 16.98 304 67.7 449 CRMSMC BURIED . . . . . . . . 15.80 132 61.7 214 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 1637 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 1575 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 966 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 1093 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 544 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 16.63 436 20.1 2173 CRMSALL SECONDARY STRUCTURE . . 15.08 232 18.3 1266 CRMSALL SURFACE . . . . . . . . 16.98 304 20.9 1457 CRMSALL BURIED . . . . . . . . 15.80 132 18.4 716 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.618 1.000 0.500 109 81.3 134 ERRCA SECONDARY STRUCTURE . . 14.169 1.000 0.500 58 77.3 75 ERRCA SURFACE . . . . . . . . 15.878 1.000 0.500 76 83.5 91 ERRCA BURIED . . . . . . . . 15.020 1.000 0.500 33 76.7 43 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.500 1.000 0.500 436 65.8 663 ERRMC SECONDARY STRUCTURE . . 14.105 1.000 0.500 232 61.9 375 ERRMC SURFACE . . . . . . . . 15.748 1.000 0.500 304 67.7 449 ERRMC BURIED . . . . . . . . 14.927 1.000 0.500 132 61.7 214 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 1637 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 1575 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 966 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 1093 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 544 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.500 1.000 0.500 436 20.1 2173 ERRALL SECONDARY STRUCTURE . . 14.105 1.000 0.500 232 18.3 1266 ERRALL SURFACE . . . . . . . . 15.748 1.000 0.500 304 20.9 1457 ERRALL BURIED . . . . . . . . 14.927 1.000 0.500 132 18.4 716 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 4 18 109 134 DISTCA CA (P) 0.00 0.00 0.00 2.99 13.43 134 DISTCA CA (RMS) 0.00 0.00 0.00 4.05 7.09 DISTCA ALL (N) 0 2 3 13 77 436 2173 DISTALL ALL (P) 0.00 0.09 0.14 0.60 3.54 2173 DISTALL ALL (RMS) 0.00 1.95 2.01 3.64 7.16 DISTALL END of the results output