####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 63 ( 498), selected 63 , name T0553TS424_1-D1 # Molecule2: number of CA atoms 63 ( 1002), selected 63 , name T0553-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0553TS424_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 23 - 53 4.93 14.26 LONGEST_CONTINUOUS_SEGMENT: 31 32 - 62 5.00 17.59 LONGEST_CONTINUOUS_SEGMENT: 31 33 - 63 4.91 17.76 LONGEST_CONTINUOUS_SEGMENT: 31 34 - 64 4.95 17.92 LCS_AVERAGE: 48.55 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 9 - 29 1.79 15.71 LCS_AVERAGE: 24.34 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 10 - 28 1.00 15.52 LCS_AVERAGE: 20.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 63 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 3 V 3 3 3 30 3 3 3 3 3 5 17 20 23 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT F 4 F 4 3 4 30 3 5 8 8 9 12 14 20 23 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT K 5 K 5 3 4 30 3 4 4 4 11 20 24 25 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT R 6 R 6 3 4 30 3 5 12 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT V 7 V 7 5 6 30 3 5 5 5 10 13 14 21 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT A 8 A 8 5 6 30 3 5 5 5 6 6 8 11 12 14 22 23 30 35 37 37 38 38 39 40 LCS_GDT G 9 G 9 5 21 30 3 5 5 5 10 13 16 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT I 10 I 10 19 21 30 3 9 16 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT K 11 K 11 19 21 30 8 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT D 12 D 12 19 21 30 8 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT K 13 K 13 19 21 30 8 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT A 14 A 14 19 21 30 8 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT A 15 A 15 19 21 30 8 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT I 16 I 16 19 21 30 8 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT K 17 K 17 19 21 30 8 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT T 18 T 18 19 21 30 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT L 19 L 19 19 21 30 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT I 20 I 20 19 21 30 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT S 21 S 21 19 21 30 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT A 22 A 22 19 21 30 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT A 23 A 23 19 21 31 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT Y 24 Y 24 19 21 31 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT R 25 R 25 19 21 31 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT Q 26 Q 26 19 21 31 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT I 27 I 27 19 21 31 7 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT F 28 F 28 19 21 31 3 4 11 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT E 29 E 29 5 21 31 3 5 11 19 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT R 30 R 30 4 6 31 3 4 8 8 9 10 12 17 21 25 31 33 34 36 37 37 38 38 39 40 LCS_GDT D 31 D 31 4 6 31 3 5 8 8 9 10 12 15 19 21 24 27 30 32 35 36 36 38 39 40 LCS_GDT I 32 I 32 4 6 31 3 4 5 5 6 7 11 14 17 21 24 27 30 32 32 34 35 38 39 40 LCS_GDT A 33 A 33 7 8 31 6 7 8 8 9 10 12 15 19 21 24 27 30 32 32 34 35 38 39 40 LCS_GDT P 34 P 34 7 8 31 6 7 7 8 8 11 17 19 21 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT Y 35 Y 35 7 8 31 6 7 7 8 8 8 8 9 15 17 20 26 30 32 32 34 35 38 39 40 LCS_GDT I 36 I 36 7 8 31 6 7 8 8 9 10 12 15 19 21 24 27 30 32 32 34 35 38 39 40 LCS_GDT A 37 A 37 7 8 31 6 7 9 13 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT Q 38 Q 38 7 8 31 6 7 10 12 15 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT N 39 N 39 7 8 31 5 7 7 12 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT E 40 E 40 5 8 31 3 4 5 8 9 10 12 15 19 21 24 27 30 32 32 34 35 38 39 40 LCS_GDT F 41 F 41 5 15 31 3 4 5 5 5 9 13 15 19 21 24 27 30 32 32 34 35 38 39 40 LCS_GDT S 42 S 42 14 17 31 5 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT G 43 G 43 14 17 31 5 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT W 44 W 44 14 17 31 5 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT E 45 E 45 14 17 31 5 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT S 46 S 46 14 17 31 7 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT K 47 K 47 14 17 31 7 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT L 48 L 48 14 17 31 5 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT G 49 G 49 14 17 31 7 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT N 50 N 50 14 17 31 7 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT G 51 G 51 14 17 31 7 12 13 14 16 18 19 21 22 23 24 27 30 32 32 34 35 38 39 40 LCS_GDT E 52 E 52 14 17 31 7 12 13 14 16 18 19 21 22 23 24 26 29 32 32 34 35 38 39 40 LCS_GDT I 53 I 53 14 17 31 7 13 13 14 16 18 19 21 22 23 24 26 28 30 32 34 36 38 39 40 LCS_GDT T 54 T 54 14 17 31 5 13 13 14 16 18 19 21 22 23 26 29 31 33 35 36 38 38 39 40 LCS_GDT V 55 V 55 14 17 31 5 13 13 14 16 18 19 21 22 23 24 26 28 29 31 34 36 38 39 40 LCS_GDT K 56 K 56 14 17 31 7 13 13 14 15 18 19 21 22 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT E 57 E 57 14 17 31 7 13 13 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT F 58 F 58 14 17 31 7 13 13 14 15 19 20 23 26 28 31 31 34 36 37 37 38 38 39 40 LCS_GDT I 59 I 59 14 16 31 7 13 13 14 15 17 19 21 22 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT E 60 E 60 14 16 31 7 13 13 14 20 23 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT G 61 G 61 14 16 31 7 13 13 14 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT L 62 L 62 14 16 31 7 13 13 18 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT G 63 G 63 14 16 31 7 13 13 14 14 17 18 20 23 29 33 34 34 36 37 37 38 38 39 40 LCS_GDT Y 64 Y 64 14 16 31 7 13 13 14 14 16 18 19 20 20 22 24 32 35 36 37 38 38 39 40 LCS_GDT S 65 S 65 14 16 25 4 13 13 14 14 15 17 19 26 28 31 34 34 36 37 37 38 38 39 40 LCS_AVERAGE LCS_A: 31.02 ( 20.16 24.34 48.55 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 17 17 20 22 24 24 26 27 29 33 34 34 36 37 37 38 38 39 40 GDT PERCENT_AT 14.29 26.98 26.98 31.75 34.92 38.10 38.10 41.27 42.86 46.03 52.38 53.97 53.97 57.14 58.73 58.73 60.32 60.32 61.90 63.49 GDT RMS_LOCAL 0.20 0.57 0.57 1.23 1.41 1.57 1.57 2.06 2.29 2.70 3.28 3.36 3.36 3.77 3.93 3.87 4.08 4.08 4.38 4.64 GDT RMS_ALL_AT 15.48 15.55 15.55 15.73 15.72 15.92 15.92 16.12 16.22 16.22 16.53 16.61 16.61 16.30 16.32 16.60 16.43 16.43 16.28 16.18 # Checking swapping # possible swapping detected: F 28 F 28 # possible swapping detected: F 41 F 41 # possible swapping detected: E 57 E 57 # possible swapping detected: F 58 F 58 # possible swapping detected: Y 64 Y 64 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 3 V 3 7.422 0 0.596 0.605 9.376 7.857 7.959 LGA F 4 F 4 7.355 0 0.573 1.334 14.555 10.833 4.372 LGA K 5 K 5 5.927 0 0.632 1.271 14.584 24.524 12.540 LGA R 6 R 6 1.458 0 0.592 0.744 14.011 67.024 31.732 LGA V 7 V 7 5.512 0 0.670 1.043 8.619 27.024 17.959 LGA A 8 A 8 8.391 0 0.496 0.450 10.104 5.476 4.381 LGA G 9 G 9 5.092 0 0.097 0.097 5.647 36.905 36.905 LGA I 10 I 10 1.018 0 0.170 0.172 2.540 73.214 75.238 LGA K 11 K 11 2.157 0 0.179 1.101 10.610 70.833 42.328 LGA D 12 D 12 1.303 0 0.027 0.906 4.363 79.286 67.857 LGA K 13 K 13 1.148 0 0.030 0.717 4.457 83.690 68.836 LGA A 14 A 14 0.710 0 0.042 0.049 0.795 90.476 90.476 LGA A 15 A 15 0.633 0 0.021 0.020 0.699 90.476 90.476 LGA I 16 I 16 0.461 0 0.025 0.655 2.413 100.000 92.024 LGA K 17 K 17 1.035 0 0.079 0.676 3.532 83.690 67.725 LGA T 18 T 18 1.750 0 0.059 0.145 2.471 75.000 70.612 LGA L 19 L 19 1.759 0 0.032 1.131 7.172 77.143 55.774 LGA I 20 I 20 1.358 0 0.043 0.077 2.769 83.690 73.333 LGA S 21 S 21 1.710 0 0.021 0.034 2.730 77.143 71.746 LGA A 22 A 22 1.484 0 0.019 0.018 2.002 81.429 78.095 LGA A 23 A 23 1.422 0 0.164 0.169 1.908 81.548 79.810 LGA Y 24 Y 24 1.873 0 0.073 0.285 5.623 77.143 50.992 LGA R 25 R 25 1.500 0 0.068 1.051 8.015 81.548 53.420 LGA Q 26 Q 26 1.130 0 0.051 0.683 1.675 83.690 80.529 LGA I 27 I 27 1.509 0 0.188 0.727 3.923 77.143 71.310 LGA F 28 F 28 2.142 0 0.183 1.411 8.966 63.095 36.797 LGA E 29 E 29 2.532 0 0.056 1.314 6.188 41.310 44.127 LGA R 30 R 30 9.598 0 0.095 0.857 17.323 3.452 1.255 LGA D 31 D 31 13.863 0 0.222 1.037 17.593 0.000 0.000 LGA I 32 I 32 17.489 0 0.636 1.342 20.938 0.000 0.000 LGA A 33 A 33 24.348 0 0.600 0.589 25.837 0.000 0.000 LGA P 34 P 34 25.881 0 0.049 0.038 28.224 0.000 0.000 LGA Y 35 Y 35 28.627 0 0.073 1.345 31.007 0.000 0.000 LGA I 36 I 36 29.513 0 0.021 0.083 30.787 0.000 0.000 LGA A 37 A 37 28.620 0 0.031 0.028 31.107 0.000 0.000 LGA Q 38 Q 38 32.347 0 0.102 1.174 35.626 0.000 0.000 LGA N 39 N 39 34.431 0 0.581 0.875 38.191 0.000 0.000 LGA E 40 E 40 32.246 0 0.298 0.914 34.565 0.000 0.000 LGA F 41 F 41 31.706 0 0.044 0.073 32.278 0.000 0.000 LGA S 42 S 42 31.289 0 0.647 0.589 31.686 0.000 0.000 LGA G 43 G 43 29.969 0 0.038 0.038 30.464 0.000 0.000 LGA W 44 W 44 23.506 0 0.059 1.183 25.950 0.000 0.000 LGA E 45 E 45 25.433 0 0.025 0.663 31.884 0.000 0.000 LGA S 46 S 46 28.001 0 0.052 0.635 31.031 0.000 0.000 LGA K 47 K 47 21.986 0 0.044 0.802 24.805 0.000 0.000 LGA L 48 L 48 19.923 0 0.117 0.755 21.803 0.000 0.000 LGA G 49 G 49 25.799 0 0.026 0.026 26.611 0.000 0.000 LGA N 50 N 50 25.379 0 0.035 0.153 29.962 0.000 0.000 LGA G 51 G 51 18.909 0 0.046 0.046 21.237 0.000 0.000 LGA E 52 E 52 17.554 0 0.070 0.961 24.509 0.000 0.000 LGA I 53 I 53 12.672 0 0.255 1.150 14.846 0.000 0.000 LGA T 54 T 54 9.814 0 0.049 0.072 9.873 1.071 5.714 LGA V 55 V 55 11.351 0 0.030 0.115 15.811 1.071 0.612 LGA K 56 K 56 6.833 0 0.089 1.117 8.248 23.095 16.561 LGA E 57 E 57 2.544 0 0.070 1.276 5.107 53.810 43.386 LGA F 58 F 58 6.157 0 0.030 1.414 12.699 27.976 10.779 LGA I 59 I 59 6.356 0 0.091 1.366 12.965 21.548 11.488 LGA E 60 E 60 4.341 0 0.040 1.087 6.365 37.619 31.481 LGA G 61 G 61 2.449 0 0.067 0.067 2.703 71.190 71.190 LGA L 62 L 62 2.226 0 0.028 0.208 8.134 58.929 38.810 LGA G 63 G 63 7.355 0 0.067 0.067 9.534 10.952 10.952 LGA Y 64 Y 64 8.155 0 0.198 1.683 16.763 6.667 2.619 LGA S 65 S 65 5.743 0 0.040 0.044 6.205 21.548 25.794 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 63 252 252 100.00 498 498 100.00 63 SUMMARY(RMSD_GDC): 12.221 12.146 12.879 33.176 27.746 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 63 63 4.0 26 2.06 39.683 36.557 1.202 LGA_LOCAL RMSD: 2.063 Number of atoms: 26 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.122 Number of assigned atoms: 63 Std_ASGN_ATOMS RMSD: 12.221 Standard rmsd on all 63 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.327470 * X + 0.092418 * Y + -0.940331 * Z + -1.517440 Y_new = 0.795140 * X + -0.564557 * Y + 0.221421 * Z + -7.903433 Z_new = -0.510408 * X + -0.820204 * Y + -0.258361 * Z + -4.366159 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.180126 0.535659 -1.875953 [DEG: 67.6162 30.6910 -107.4842 ] ZXZ: -1.802055 1.832121 -2.584942 [DEG: -103.2502 104.9728 -148.1063 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0553TS424_1-D1 REMARK 2: T0553-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0553TS424_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 63 63 4.0 26 2.06 36.557 12.22 REMARK ---------------------------------------------------------- MOLECULE T0553TS424_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0553 REMARK MODEL 1 REMARK PARENT N/A ATOM 18 N VAL 3 6.798 3.385 -8.574 1.00 0.00 N ATOM 19 CA VAL 3 7.820 2.393 -8.887 1.00 0.00 C ATOM 20 C VAL 3 7.198 1.113 -9.428 1.00 0.00 C ATOM 21 O VAL 3 7.702 0.521 -10.382 1.00 0.00 O ATOM 22 CB VAL 3 8.676 2.054 -7.653 1.00 0.00 C ATOM 23 CG1 VAL 3 9.602 0.884 -7.950 1.00 0.00 C ATOM 24 CG2 VAL 3 9.479 3.268 -7.210 1.00 0.00 C ATOM 25 N PHE 4 6.098 0.689 -8.813 1.00 0.00 N ATOM 26 CA PHE 4 5.384 -0.502 -9.255 1.00 0.00 C ATOM 27 C PHE 4 5.054 -0.429 -10.739 1.00 0.00 C ATOM 28 O PHE 4 5.362 -1.348 -11.499 1.00 0.00 O ATOM 29 CB PHE 4 4.103 -0.691 -8.440 1.00 0.00 C ATOM 30 CG PHE 4 3.197 -1.763 -8.974 1.00 0.00 C ATOM 31 CD1 PHE 4 3.536 -3.103 -8.851 1.00 0.00 C ATOM 32 CD2 PHE 4 2.004 -1.436 -9.602 1.00 0.00 C ATOM 33 CE1 PHE 4 2.703 -4.091 -9.343 1.00 0.00 C ATOM 34 CE2 PHE 4 1.170 -2.422 -10.093 1.00 0.00 C ATOM 35 CZ PHE 4 1.521 -3.750 -9.963 1.00 0.00 C ATOM 36 N LYS 5 4.428 0.668 -11.147 1.00 0.00 N ATOM 37 CA LYS 5 4.001 0.837 -12.532 1.00 0.00 C ATOM 38 C LYS 5 5.194 1.063 -13.452 1.00 0.00 C ATOM 39 O LYS 5 5.186 0.640 -14.607 1.00 0.00 O ATOM 40 CB LYS 5 3.017 2.003 -12.652 1.00 0.00 C ATOM 41 CG LYS 5 1.706 1.798 -11.904 1.00 0.00 C ATOM 42 CD LYS 5 0.865 0.706 -12.548 1.00 0.00 C ATOM 43 CE LYS 5 -0.497 0.588 -11.880 1.00 0.00 C ATOM 44 NZ LYS 5 -1.363 -0.415 -12.556 1.00 0.00 N ATOM 45 N ARG 6 6.217 1.733 -12.933 1.00 0.00 N ATOM 46 CA ARG 6 7.395 2.066 -13.723 1.00 0.00 C ATOM 47 C ARG 6 8.165 0.813 -14.120 1.00 0.00 C ATOM 48 O ARG 6 8.543 0.645 -15.281 1.00 0.00 O ATOM 49 CB ARG 6 8.294 3.071 -13.018 1.00 0.00 C ATOM 50 CG ARG 6 9.534 3.477 -13.798 1.00 0.00 C ATOM 51 CD ARG 6 10.362 4.517 -13.134 1.00 0.00 C ATOM 52 NE ARG 6 11.558 4.894 -13.868 1.00 0.00 N ATOM 53 CZ ARG 6 12.461 5.802 -13.445 1.00 0.00 C ATOM 54 NH1 ARG 6 12.290 6.453 -12.315 1.00 0.00 H ATOM 55 NH2 ARG 6 13.514 6.037 -14.208 1.00 0.00 H ATOM 56 N VAL 7 8.395 -0.067 -13.151 1.00 0.00 N ATOM 57 CA VAL 7 9.270 -1.214 -13.349 1.00 0.00 C ATOM 58 C VAL 7 8.514 -2.386 -13.964 1.00 0.00 C ATOM 59 O VAL 7 9.116 -3.294 -14.536 1.00 0.00 O ATOM 60 CB VAL 7 9.914 -1.668 -12.026 1.00 0.00 C ATOM 61 CG1 VAL 7 10.586 -0.493 -11.329 1.00 0.00 C ATOM 62 CG2 VAL 7 8.873 -2.302 -11.116 1.00 0.00 C ATOM 63 N ALA 8 7.192 -2.359 -13.840 1.00 0.00 N ATOM 64 CA ALA 8 6.347 -3.397 -14.420 1.00 0.00 C ATOM 65 C ALA 8 6.474 -3.425 -15.939 1.00 0.00 C ATOM 66 O ALA 8 6.153 -4.426 -16.578 1.00 0.00 O ATOM 67 CB ALA 8 4.897 -3.190 -14.009 1.00 0.00 C ATOM 68 N GLY 9 6.941 -2.319 -16.508 1.00 0.00 N ATOM 69 CA GLY 9 7.069 -2.199 -17.956 1.00 0.00 C ATOM 70 C GLY 9 8.423 -2.709 -18.433 1.00 0.00 C ATOM 71 O GLY 9 8.725 -2.675 -19.626 1.00 0.00 O ATOM 72 N ILE 10 9.235 -3.183 -17.494 1.00 0.00 N ATOM 73 CA ILE 10 10.548 -3.726 -17.820 1.00 0.00 C ATOM 74 C ILE 10 10.441 -5.142 -18.367 1.00 0.00 C ATOM 75 O ILE 10 9.819 -6.010 -17.756 1.00 0.00 O ATOM 76 CB ILE 10 11.479 -3.731 -16.592 1.00 0.00 C ATOM 77 CG1 ILE 10 11.732 -2.301 -16.107 1.00 0.00 C ATOM 78 CG2 ILE 10 12.791 -4.425 -16.921 1.00 0.00 C ATOM 79 CD1 ILE 10 12.461 -2.224 -14.786 1.00 0.00 C ATOM 80 N LYS 11 11.048 -5.370 -19.527 1.00 0.00 N ATOM 81 CA LYS 11 10.886 -6.630 -20.242 1.00 0.00 C ATOM 82 C LYS 11 11.317 -7.810 -19.384 1.00 0.00 C ATOM 83 O LYS 11 10.742 -8.895 -19.465 1.00 0.00 O ATOM 84 CB LYS 11 11.683 -6.611 -21.548 1.00 0.00 C ATOM 85 CG LYS 11 11.120 -5.683 -22.616 1.00 0.00 C ATOM 86 CD LYS 11 11.964 -5.718 -23.882 1.00 0.00 C ATOM 87 CE LYS 11 11.411 -4.779 -24.943 1.00 0.00 C ATOM 88 NZ LYS 11 12.245 -4.782 -26.176 1.00 0.00 N ATOM 89 N ASP 12 12.336 -7.594 -18.558 1.00 0.00 N ATOM 90 CA ASP 12 12.859 -8.645 -17.694 1.00 0.00 C ATOM 91 C ASP 12 11.942 -8.885 -16.501 1.00 0.00 C ATOM 92 O ASP 12 11.815 -8.032 -15.622 1.00 0.00 O ATOM 93 CB ASP 12 14.267 -8.292 -17.212 1.00 0.00 C ATOM 94 CG ASP 12 14.946 -9.383 -16.396 1.00 0.00 C ATOM 95 OD1 ASP 12 14.326 -10.393 -16.159 1.00 0.00 O ATOM 96 OD2 ASP 12 16.124 -9.270 -16.152 1.00 0.00 O ATOM 97 N LYS 13 11.302 -10.050 -16.476 1.00 0.00 N ATOM 98 CA LYS 13 10.353 -10.381 -15.421 1.00 0.00 C ATOM 99 C LYS 13 11.033 -10.419 -14.059 1.00 0.00 C ATOM 100 O LYS 13 10.411 -10.133 -13.035 1.00 0.00 O ATOM 101 CB LYS 13 9.677 -11.722 -15.709 1.00 0.00 C ATOM 102 CG LYS 13 8.705 -11.698 -16.881 1.00 0.00 C ATOM 103 CD LYS 13 8.078 -13.066 -17.108 1.00 0.00 C ATOM 104 CE LYS 13 7.099 -13.041 -18.273 1.00 0.00 C ATOM 105 NZ LYS 13 6.496 -14.379 -18.522 1.00 0.00 N ATOM 106 N ALA 14 12.313 -10.772 -14.052 1.00 0.00 N ATOM 107 CA ALA 14 13.096 -10.795 -12.822 1.00 0.00 C ATOM 108 C ALA 14 13.248 -9.396 -12.242 1.00 0.00 C ATOM 109 O ALA 14 13.131 -9.200 -11.031 1.00 0.00 O ATOM 110 CB ALA 14 14.460 -11.420 -13.074 1.00 0.00 C ATOM 111 N ALA 15 13.509 -8.424 -13.109 1.00 0.00 N ATOM 112 CA ALA 15 13.604 -7.030 -12.694 1.00 0.00 C ATOM 113 C ALA 15 12.266 -6.516 -12.180 1.00 0.00 C ATOM 114 O ALA 15 12.212 -5.754 -11.214 1.00 0.00 O ATOM 115 CB ALA 15 14.101 -6.167 -13.844 1.00 0.00 C ATOM 116 N ILE 16 11.186 -6.935 -12.831 1.00 0.00 N ATOM 117 CA ILE 16 9.842 -6.588 -12.388 1.00 0.00 C ATOM 118 C ILE 16 9.596 -7.050 -10.957 1.00 0.00 C ATOM 119 O ILE 16 9.227 -6.255 -10.094 1.00 0.00 O ATOM 120 CB ILE 16 8.769 -7.202 -13.307 1.00 0.00 C ATOM 121 CG1 ILE 16 8.796 -6.528 -14.681 1.00 0.00 C ATOM 122 CG2 ILE 16 7.392 -7.075 -12.675 1.00 0.00 C ATOM 123 CD1 ILE 16 7.900 -7.191 -15.705 1.00 0.00 C ATOM 124 N LYS 17 9.802 -8.340 -10.713 1.00 0.00 N ATOM 125 CA LYS 17 9.475 -8.936 -9.424 1.00 0.00 C ATOM 126 C LYS 17 10.343 -8.359 -8.312 1.00 0.00 C ATOM 127 O LYS 17 9.854 -8.053 -7.225 1.00 0.00 O ATOM 128 CB LYS 17 9.635 -10.455 -9.479 1.00 0.00 C ATOM 129 CG LYS 17 8.602 -11.166 -10.344 1.00 0.00 C ATOM 130 CD LYS 17 8.851 -12.667 -10.381 1.00 0.00 C ATOM 131 CE LYS 17 7.856 -13.371 -11.294 1.00 0.00 C ATOM 132 NZ LYS 17 8.093 -14.838 -11.349 1.00 0.00 N ATOM 133 N THR 18 11.632 -8.211 -8.593 1.00 0.00 N ATOM 134 CA THR 18 12.584 -7.735 -7.596 1.00 0.00 C ATOM 135 C THR 18 12.302 -6.287 -7.212 1.00 0.00 C ATOM 136 O THR 18 12.230 -5.952 -6.029 1.00 0.00 O ATOM 137 CB THR 18 14.034 -7.849 -8.099 1.00 0.00 C ATOM 138 OG1 THR 18 14.357 -9.226 -8.329 1.00 0.00 O ATOM 139 CG2 THR 18 15.001 -7.270 -7.076 1.00 0.00 C ATOM 140 N LEU 19 12.146 -5.435 -8.218 1.00 0.00 N ATOM 141 CA LEU 19 11.995 -4.002 -7.991 1.00 0.00 C ATOM 142 C LEU 19 10.666 -3.688 -7.317 1.00 0.00 C ATOM 143 O LEU 19 10.581 -2.789 -6.479 1.00 0.00 O ATOM 144 CB LEU 19 12.115 -3.240 -9.316 1.00 0.00 C ATOM 145 CG LEU 19 13.506 -3.267 -9.963 1.00 0.00 C ATOM 146 CD1 LEU 19 13.450 -2.642 -11.350 1.00 0.00 C ATOM 147 CD2 LEU 19 14.492 -2.521 -9.076 1.00 0.00 C ATOM 148 N ILE 20 9.630 -4.433 -7.686 1.00 0.00 N ATOM 149 CA ILE 20 8.325 -4.300 -7.049 1.00 0.00 C ATOM 150 C ILE 20 8.384 -4.696 -5.580 1.00 0.00 C ATOM 151 O ILE 20 7.871 -3.987 -4.715 1.00 0.00 O ATOM 152 CB ILE 20 7.261 -5.157 -7.761 1.00 0.00 C ATOM 153 CG1 ILE 20 6.933 -4.569 -9.134 1.00 0.00 C ATOM 154 CG2 ILE 20 6.006 -5.260 -6.907 1.00 0.00 C ATOM 155 CD1 ILE 20 6.046 -5.455 -9.981 1.00 0.00 C ATOM 156 N SER 21 9.015 -5.832 -5.305 1.00 0.00 N ATOM 157 CA SER 21 9.202 -6.293 -3.933 1.00 0.00 C ATOM 158 C SER 21 9.898 -5.235 -3.087 1.00 0.00 C ATOM 159 O SER 21 9.554 -5.031 -1.924 1.00 0.00 O ATOM 160 CB SER 21 9.992 -7.586 -3.919 1.00 0.00 C ATOM 161 OG SER 21 9.280 -8.645 -4.499 1.00 0.00 O ATOM 162 N ALA 22 10.884 -4.567 -3.679 1.00 0.00 N ATOM 163 CA ALA 22 11.616 -3.513 -2.989 1.00 0.00 C ATOM 164 C ALA 22 10.681 -2.403 -2.529 1.00 0.00 C ATOM 165 O ALA 22 10.740 -1.965 -1.378 1.00 0.00 O ATOM 166 CB ALA 22 12.707 -2.950 -3.887 1.00 0.00 C ATOM 167 N ALA 23 9.816 -1.951 -3.430 1.00 0.00 N ATOM 168 CA ALA 23 8.845 -0.912 -3.109 1.00 0.00 C ATOM 169 C ALA 23 8.009 -1.296 -1.895 1.00 0.00 C ATOM 170 O ALA 23 8.017 -0.600 -0.878 1.00 0.00 O ATOM 171 CB ALA 23 7.949 -0.635 -4.307 1.00 0.00 C ATOM 172 N TYR 24 7.288 -2.407 -2.006 1.00 0.00 N ATOM 173 CA TYR 24 6.442 -2.883 -0.919 1.00 0.00 C ATOM 174 C TYR 24 7.112 -2.677 0.433 1.00 0.00 C ATOM 175 O TYR 24 6.450 -2.373 1.424 1.00 0.00 O ATOM 176 CB TYR 24 6.099 -4.362 -1.116 1.00 0.00 C ATOM 177 CG TYR 24 5.180 -4.628 -2.286 1.00 0.00 C ATOM 178 CD1 TYR 24 4.717 -3.590 -3.081 1.00 0.00 C ATOM 179 CD2 TYR 24 4.777 -5.919 -2.595 1.00 0.00 C ATOM 180 CE1 TYR 24 3.876 -3.828 -4.151 1.00 0.00 C ATOM 181 CE2 TYR 24 3.937 -6.169 -3.663 1.00 0.00 C ATOM 182 CZ TYR 24 3.488 -5.120 -4.439 1.00 0.00 C ATOM 183 OH TYR 24 2.652 -5.363 -5.504 1.00 0.00 H ATOM 184 N ARG 25 8.430 -2.844 0.466 1.00 0.00 N ATOM 185 CA ARG 25 9.198 -2.630 1.685 1.00 0.00 C ATOM 186 C ARG 25 9.387 -1.144 1.962 1.00 0.00 C ATOM 187 O ARG 25 9.582 -0.735 3.107 1.00 0.00 O ATOM 188 CB ARG 25 10.530 -3.364 1.661 1.00 0.00 C ATOM 189 CG ARG 25 10.427 -4.878 1.764 1.00 0.00 C ATOM 190 CD ARG 25 11.731 -5.587 1.689 1.00 0.00 C ATOM 191 NE ARG 25 11.634 -7.036 1.779 1.00 0.00 N ATOM 192 CZ ARG 25 12.659 -7.884 1.573 1.00 0.00 C ATOM 193 NH1 ARG 25 13.849 -7.439 1.231 1.00 0.00 H ATOM 194 NH2 ARG 25 12.433 -9.180 1.703 1.00 0.00 H ATOM 195 N GLN 26 9.328 -0.337 0.908 1.00 0.00 N ATOM 196 CA GLN 26 9.332 1.113 1.051 1.00 0.00 C ATOM 197 C GLN 26 8.068 1.600 1.751 1.00 0.00 C ATOM 198 O GLN 26 8.129 2.445 2.643 1.00 0.00 O ATOM 199 CB GLN 26 9.455 1.786 -0.319 1.00 0.00 C ATOM 200 CG GLN 26 9.565 3.300 -0.261 1.00 0.00 C ATOM 201 CD GLN 26 10.822 3.762 0.451 1.00 0.00 C ATOM 202 OE1 GLN 26 11.915 3.241 0.211 1.00 0.00 O ATOM 203 NE2 GLN 26 10.674 4.742 1.336 1.00 0.00 N ATOM 204 N ILE 27 6.925 1.060 1.342 1.00 0.00 N ATOM 205 CA ILE 27 5.656 1.370 1.988 1.00 0.00 C ATOM 206 C ILE 27 5.604 0.801 3.400 1.00 0.00 C ATOM 207 O ILE 27 4.957 1.364 4.284 1.00 0.00 O ATOM 208 CB ILE 27 4.464 0.828 1.181 1.00 0.00 C ATOM 209 CG1 ILE 27 4.372 1.531 -0.176 1.00 0.00 C ATOM 210 CG2 ILE 27 3.170 1.001 1.962 1.00 0.00 C ATOM 211 CD1 ILE 27 4.180 3.028 -0.076 1.00 0.00 C ATOM 212 N PHE 28 6.289 -0.320 3.606 1.00 0.00 N ATOM 213 CA PHE 28 6.424 -0.899 4.937 1.00 0.00 C ATOM 214 C PHE 28 7.136 0.055 5.886 1.00 0.00 C ATOM 215 O PHE 28 6.661 0.317 6.991 1.00 0.00 O ATOM 216 CB PHE 28 7.175 -2.230 4.865 1.00 0.00 C ATOM 217 CG PHE 28 7.441 -2.850 6.208 1.00 0.00 C ATOM 218 CD1 PHE 28 6.445 -3.549 6.874 1.00 0.00 C ATOM 219 CD2 PHE 28 8.685 -2.734 6.808 1.00 0.00 C ATOM 220 CE1 PHE 28 6.688 -4.119 8.110 1.00 0.00 C ATOM 221 CE2 PHE 28 8.931 -3.303 8.042 1.00 0.00 C ATOM 222 CZ PHE 28 7.930 -3.997 8.694 1.00 0.00 C ATOM 223 N GLU 29 8.279 0.570 5.449 1.00 0.00 N ATOM 224 CA GLU 29 9.058 1.503 6.256 1.00 0.00 C ATOM 225 C GLU 29 8.286 2.789 6.511 1.00 0.00 C ATOM 226 O GLU 29 8.333 3.348 7.607 1.00 0.00 O ATOM 227 CB GLU 29 10.391 1.817 5.574 1.00 0.00 C ATOM 228 CG GLU 29 11.384 0.662 5.570 1.00 0.00 C ATOM 229 CD GLU 29 12.615 1.003 4.779 1.00 0.00 C ATOM 230 OE1 GLU 29 12.655 2.065 4.205 1.00 0.00 O ATOM 231 OE2 GLU 29 13.562 0.253 4.840 1.00 0.00 O ATOM 232 N ARG 30 7.571 3.257 5.493 1.00 0.00 N ATOM 233 CA ARG 30 6.658 4.383 5.651 1.00 0.00 C ATOM 234 C ARG 30 5.468 4.263 4.707 1.00 0.00 C ATOM 235 O ARG 30 5.631 4.228 3.488 1.00 0.00 O ATOM 236 CB ARG 30 7.364 5.721 5.488 1.00 0.00 C ATOM 237 CG ARG 30 6.481 6.941 5.701 1.00 0.00 C ATOM 238 CD ARG 30 7.203 8.237 5.647 1.00 0.00 C ATOM 239 NE ARG 30 8.169 8.434 6.715 1.00 0.00 N ATOM 240 CZ ARG 30 9.226 9.267 6.646 1.00 0.00 C ATOM 241 NH1 ARG 30 9.480 9.952 5.553 1.00 0.00 H ATOM 242 NH2 ARG 30 10.018 9.359 7.701 1.00 0.00 H ATOM 243 N ASP 31 4.270 4.202 5.279 1.00 0.00 N ATOM 244 CA ASP 31 3.064 3.934 4.504 1.00 0.00 C ATOM 245 C ASP 31 2.730 5.100 3.582 1.00 0.00 C ATOM 246 O ASP 31 3.346 6.163 3.663 1.00 0.00 O ATOM 247 CB ASP 31 1.884 3.643 5.434 1.00 0.00 C ATOM 248 CG ASP 31 2.023 2.363 6.246 1.00 0.00 C ATOM 249 OD1 ASP 31 2.353 1.351 5.673 1.00 0.00 O ATOM 250 OD2 ASP 31 1.955 2.436 7.451 1.00 0.00 O ATOM 251 N ILE 32 1.750 4.895 2.710 1.00 0.00 N ATOM 252 CA ILE 32 1.466 5.844 1.640 1.00 0.00 C ATOM 253 C ILE 32 1.031 7.192 2.202 1.00 0.00 C ATOM 254 O ILE 32 1.305 8.237 1.612 1.00 0.00 O ATOM 255 CB ILE 32 0.373 5.316 0.692 1.00 0.00 C ATOM 256 CG1 ILE 32 0.331 6.152 -0.590 1.00 0.00 C ATOM 257 CG2 ILE 32 -0.981 5.327 1.382 1.00 0.00 C ATOM 258 CD1 ILE 32 -0.479 5.524 -1.702 1.00 0.00 C ATOM 259 N ALA 33 0.354 7.160 3.344 1.00 0.00 N ATOM 260 CA ALA 33 -0.323 8.341 3.866 1.00 0.00 C ATOM 261 C ALA 33 0.626 9.198 4.695 1.00 0.00 C ATOM 262 O ALA 33 0.682 10.416 4.530 1.00 0.00 O ATOM 263 CB ALA 33 -1.536 7.936 4.692 1.00 0.00 C ATOM 264 N PRO 34 1.371 8.553 5.585 1.00 0.00 N ATOM 265 CA PRO 34 2.340 9.251 6.421 1.00 0.00 C ATOM 266 C PRO 34 3.218 10.180 5.591 1.00 0.00 C ATOM 267 O PRO 34 3.658 11.225 6.067 1.00 0.00 O ATOM 268 CB PRO 34 3.150 8.127 7.075 1.00 0.00 C ATOM 269 CG PRO 34 2.183 6.999 7.202 1.00 0.00 C ATOM 270 CD PRO 34 1.321 7.073 5.970 1.00 0.00 C ATOM 271 N TYR 35 3.465 9.791 4.343 1.00 0.00 N ATOM 272 CA TYR 35 4.285 10.591 3.441 1.00 0.00 C ATOM 273 C TYR 35 3.769 12.022 3.352 1.00 0.00 C ATOM 274 O TYR 35 4.548 12.975 3.353 1.00 0.00 O ATOM 275 CB TYR 35 4.321 9.958 2.049 1.00 0.00 C ATOM 276 CG TYR 35 5.278 8.791 1.931 1.00 0.00 C ATOM 277 CD1 TYR 35 4.818 7.523 1.612 1.00 0.00 C ATOM 278 CD2 TYR 35 6.638 8.965 2.135 1.00 0.00 C ATOM 279 CE1 TYR 35 5.686 6.454 1.503 1.00 0.00 C ATOM 280 CE2 TYR 35 7.516 7.903 2.029 1.00 0.00 C ATOM 281 CZ TYR 35 7.036 6.649 1.712 1.00 0.00 C ATOM 282 OH TYR 35 7.907 5.589 1.604 1.00 0.00 H ATOM 283 N ILE 36 2.451 12.166 3.275 1.00 0.00 N ATOM 284 CA ILE 36 1.827 13.481 3.181 1.00 0.00 C ATOM 285 C ILE 36 1.707 14.134 4.552 1.00 0.00 C ATOM 286 O ILE 36 1.985 15.323 4.711 1.00 0.00 O ATOM 287 CB ILE 36 0.432 13.399 2.538 1.00 0.00 C ATOM 288 CG1 ILE 36 0.537 12.906 1.092 1.00 0.00 C ATOM 289 CG2 ILE 36 -0.258 14.754 2.589 1.00 0.00 C ATOM 290 CD1 ILE 36 -0.798 12.596 0.454 1.00 0.00 C ATOM 291 N ALA 37 1.295 13.349 5.542 1.00 0.00 N ATOM 292 CA ALA 37 1.137 13.851 6.901 1.00 0.00 C ATOM 293 C ALA 37 2.432 14.467 7.416 1.00 0.00 C ATOM 294 O ALA 37 2.412 15.452 8.154 1.00 0.00 O ATOM 295 CB ALA 37 0.673 12.734 7.825 1.00 0.00 C ATOM 296 N GLN 38 3.557 13.881 7.020 1.00 0.00 N ATOM 297 CA GLN 38 4.864 14.364 7.451 1.00 0.00 C ATOM 298 C GLN 38 5.360 15.488 6.550 1.00 0.00 C ATOM 299 O GLN 38 6.023 16.417 7.008 1.00 0.00 O ATOM 300 CB GLN 38 5.882 13.222 7.459 1.00 0.00 C ATOM 301 CG GLN 38 5.573 12.119 8.456 1.00 0.00 C ATOM 302 CD GLN 38 5.489 12.634 9.880 1.00 0.00 C ATOM 303 OE1 GLN 38 6.370 13.363 10.345 1.00 0.00 O ATOM 304 NE2 GLN 38 4.430 12.253 10.585 1.00 0.00 N ATOM 305 N ASN 39 5.034 15.396 5.264 1.00 0.00 N ATOM 306 CA ASN 39 5.480 16.383 4.288 1.00 0.00 C ATOM 307 C ASN 39 4.462 16.549 3.169 1.00 0.00 C ATOM 308 O ASN 39 4.421 15.754 2.230 1.00 0.00 O ATOM 309 CB ASN 39 6.837 16.022 3.715 1.00 0.00 C ATOM 310 CG ASN 39 7.460 17.121 2.899 1.00 0.00 C ATOM 311 OD1 ASN 39 6.787 18.071 2.483 1.00 0.00 O ATOM 312 ND2 ASN 39 8.723 16.956 2.600 1.00 0.00 N ATOM 313 N GLU 40 3.638 17.587 3.272 1.00 0.00 N ATOM 314 CA GLU 40 2.563 17.810 2.314 1.00 0.00 C ATOM 315 C GLU 40 3.093 18.413 1.019 1.00 0.00 C ATOM 316 O GLU 40 2.324 18.742 0.117 1.00 0.00 O ATOM 317 CB GLU 40 1.489 18.720 2.917 1.00 0.00 C ATOM 318 CG GLU 40 0.721 18.106 4.078 1.00 0.00 C ATOM 319 CD GLU 40 -0.230 19.096 4.689 1.00 0.00 C ATOM 320 OE1 GLU 40 -0.256 20.217 4.245 1.00 0.00 O ATOM 321 OE2 GLU 40 -1.011 18.701 5.525 1.00 0.00 O ATOM 322 N PHE 41 4.412 18.551 0.936 1.00 0.00 N ATOM 323 CA PHE 41 5.052 19.068 -0.269 1.00 0.00 C ATOM 324 C PHE 41 6.049 18.063 -0.834 1.00 0.00 C ATOM 325 O PHE 41 6.918 18.419 -1.630 1.00 0.00 O ATOM 326 CB PHE 41 5.751 20.395 0.022 1.00 0.00 C ATOM 327 CG PHE 41 4.829 21.468 0.533 1.00 0.00 C ATOM 328 CD1 PHE 41 4.749 21.747 1.888 1.00 0.00 C ATOM 329 CD2 PHE 41 4.040 22.196 -0.343 1.00 0.00 C ATOM 330 CE1 PHE 41 3.901 22.731 2.358 1.00 0.00 C ATOM 331 CE2 PHE 41 3.192 23.183 0.123 1.00 0.00 C ATOM 332 CZ PHE 41 3.122 23.450 1.475 1.00 0.00 C ATOM 333 N SER 42 5.917 16.808 -0.419 1.00 0.00 N ATOM 334 CA SER 42 6.824 15.756 -0.863 1.00 0.00 C ATOM 335 C SER 42 6.520 15.333 -2.294 1.00 0.00 C ATOM 336 O SER 42 5.452 15.635 -2.827 1.00 0.00 O ATOM 337 CB SER 42 6.736 14.563 0.069 1.00 0.00 C ATOM 338 OG SER 42 5.513 13.890 -0.052 1.00 0.00 O ATOM 339 N GLY 43 7.465 14.634 -2.912 1.00 0.00 N ATOM 340 CA GLY 43 7.243 14.040 -4.226 1.00 0.00 C ATOM 341 C GLY 43 6.192 12.939 -4.160 1.00 0.00 C ATOM 342 O GLY 43 5.586 12.585 -5.171 1.00 0.00 O ATOM 343 N TRP 44 5.979 12.401 -2.964 1.00 0.00 N ATOM 344 CA TRP 44 4.932 11.410 -2.744 1.00 0.00 C ATOM 345 C TRP 44 3.555 12.059 -2.730 1.00 0.00 C ATOM 346 O TRP 44 2.603 11.533 -3.307 1.00 0.00 O ATOM 347 CB TRP 44 5.172 10.662 -1.432 1.00 0.00 C ATOM 348 CG TRP 44 6.175 9.555 -1.549 1.00 0.00 C ATOM 349 CD1 TRP 44 7.526 9.658 -1.396 1.00 0.00 C ATOM 350 CD2 TRP 44 5.908 8.178 -1.843 1.00 0.00 C ATOM 351 NE1 TRP 44 8.117 8.433 -1.577 1.00 0.00 N ATOM 352 CE2 TRP 44 7.144 7.506 -1.852 1.00 0.00 C ATOM 353 CE3 TRP 44 4.741 7.449 -2.101 1.00 0.00 C ATOM 354 CZ2 TRP 44 7.247 6.148 -2.108 1.00 0.00 C ATOM 355 CZ3 TRP 44 4.847 6.087 -2.355 1.00 0.00 C ATOM 356 CH2 TRP 44 6.064 5.455 -2.358 1.00 0.00 H ATOM 357 N GLU 45 3.454 13.208 -2.068 1.00 0.00 N ATOM 358 CA GLU 45 2.232 14.004 -2.098 1.00 0.00 C ATOM 359 C GLU 45 1.882 14.424 -3.519 1.00 0.00 C ATOM 360 O GLU 45 0.707 14.524 -3.875 1.00 0.00 O ATOM 361 CB GLU 45 2.377 15.239 -1.205 1.00 0.00 C ATOM 362 CG GLU 45 1.106 16.066 -1.065 1.00 0.00 C ATOM 363 CD GLU 45 0.999 17.092 -2.160 1.00 0.00 C ATOM 364 OE1 GLU 45 1.990 17.359 -2.796 1.00 0.00 O ATOM 365 OE2 GLU 45 -0.094 17.524 -2.436 1.00 0.00 O ATOM 366 N SER 46 2.908 14.668 -4.328 1.00 0.00 N ATOM 367 CA SER 46 2.715 14.944 -5.747 1.00 0.00 C ATOM 368 C SER 46 2.136 13.734 -6.468 1.00 0.00 C ATOM 369 O SER 46 1.169 13.854 -7.221 1.00 0.00 O ATOM 370 CB SER 46 4.027 15.359 -6.381 1.00 0.00 C ATOM 371 OG SER 46 4.485 16.588 -5.885 1.00 0.00 O ATOM 372 N LYS 47 2.732 12.570 -6.235 1.00 0.00 N ATOM 373 CA LYS 47 2.255 11.331 -6.836 1.00 0.00 C ATOM 374 C LYS 47 0.868 10.966 -6.321 1.00 0.00 C ATOM 375 O LYS 47 0.088 10.317 -7.019 1.00 0.00 O ATOM 376 CB LYS 47 3.235 10.188 -6.559 1.00 0.00 C ATOM 377 CG LYS 47 4.544 10.283 -7.331 1.00 0.00 C ATOM 378 CD LYS 47 5.499 9.166 -6.939 1.00 0.00 C ATOM 379 CE LYS 47 6.823 9.282 -7.680 1.00 0.00 C ATOM 380 NZ LYS 47 7.799 8.246 -7.242 1.00 0.00 N ATOM 381 N LEU 48 0.567 11.387 -5.099 1.00 0.00 N ATOM 382 CA LEU 48 -0.683 11.015 -4.447 1.00 0.00 C ATOM 383 C LEU 48 -1.783 12.022 -4.753 1.00 0.00 C ATOM 384 O LEU 48 -2.970 11.711 -4.646 1.00 0.00 O ATOM 385 CB LEU 48 -0.475 10.895 -2.932 1.00 0.00 C ATOM 386 CG LEU 48 0.022 9.527 -2.447 1.00 0.00 C ATOM 387 CD1 LEU 48 0.829 8.847 -3.544 1.00 0.00 C ATOM 388 CD2 LEU 48 0.861 9.707 -1.191 1.00 0.00 C ATOM 389 N GLY 49 -1.385 13.232 -5.133 1.00 0.00 N ATOM 390 CA GLY 49 -2.337 14.270 -5.505 1.00 0.00 C ATOM 391 C GLY 49 -2.589 14.275 -7.008 1.00 0.00 C ATOM 392 O GLY 49 -3.692 14.582 -7.461 1.00 0.00 O ATOM 393 N ASN 50 -1.560 13.932 -7.775 1.00 0.00 N ATOM 394 CA ASN 50 -1.652 13.947 -9.230 1.00 0.00 C ATOM 395 C ASN 50 -2.411 12.732 -9.749 1.00 0.00 C ATOM 396 O ASN 50 -2.990 12.766 -10.836 1.00 0.00 O ATOM 397 CB ASN 50 -0.279 14.022 -9.871 1.00 0.00 C ATOM 398 CG ASN 50 0.384 15.364 -9.732 1.00 0.00 C ATOM 399 OD1 ASN 50 -0.277 16.385 -9.515 1.00 0.00 O ATOM 400 ND2 ASN 50 1.678 15.379 -9.934 1.00 0.00 N ATOM 401 N GLY 51 -2.409 11.660 -8.964 1.00 0.00 N ATOM 402 CA GLY 51 -3.015 10.403 -9.383 1.00 0.00 C ATOM 403 C GLY 51 -1.999 9.504 -10.076 1.00 0.00 C ATOM 404 O GLY 51 -2.365 8.548 -10.759 1.00 0.00 O ATOM 405 N GLU 52 -0.720 9.818 -9.895 1.00 0.00 N ATOM 406 CA GLU 52 0.356 8.970 -10.395 1.00 0.00 C ATOM 407 C GLU 52 0.325 7.597 -9.734 1.00 0.00 C ATOM 408 O GLU 52 0.557 6.577 -10.386 1.00 0.00 O ATOM 409 CB GLU 52 1.714 9.635 -10.164 1.00 0.00 C ATOM 410 CG GLU 52 1.939 10.903 -10.976 1.00 0.00 C ATOM 411 CD GLU 52 3.249 11.551 -10.625 1.00 0.00 C ATOM 412 OE1 GLU 52 4.259 10.899 -10.726 1.00 0.00 O ATOM 413 OE2 GLU 52 3.252 12.732 -10.364 1.00 0.00 O ATOM 414 N ILE 53 0.039 7.576 -8.437 1.00 0.00 N ATOM 415 CA ILE 53 -0.295 6.337 -7.747 1.00 0.00 C ATOM 416 C ILE 53 -1.661 6.429 -7.080 1.00 0.00 C ATOM 417 O ILE 53 -1.820 7.093 -6.054 1.00 0.00 O ATOM 418 CB ILE 53 0.762 5.980 -6.685 1.00 0.00 C ATOM 419 CG1 ILE 53 2.142 5.838 -7.333 1.00 0.00 C ATOM 420 CG2 ILE 53 0.376 4.699 -5.960 1.00 0.00 C ATOM 421 CD1 ILE 53 3.269 5.678 -6.338 1.00 0.00 C ATOM 422 N THR 54 -2.647 5.758 -7.666 1.00 0.00 N ATOM 423 CA THR 54 -4.037 5.933 -7.264 1.00 0.00 C ATOM 424 C THR 54 -4.359 5.118 -6.018 1.00 0.00 C ATOM 425 O THR 54 -3.668 4.150 -5.704 1.00 0.00 O ATOM 426 CB THR 54 -5.005 5.531 -8.390 1.00 0.00 C ATOM 427 OG1 THR 54 -4.939 4.114 -8.599 1.00 0.00 O ATOM 428 CG2 THR 54 -4.646 6.246 -9.685 1.00 0.00 C ATOM 429 N VAL 55 -5.411 5.517 -5.312 1.00 0.00 N ATOM 430 CA VAL 55 -5.867 4.784 -4.137 1.00 0.00 C ATOM 431 C VAL 55 -6.024 3.300 -4.439 1.00 0.00 C ATOM 432 O VAL 55 -5.591 2.449 -3.663 1.00 0.00 O ATOM 433 CB VAL 55 -7.205 5.336 -3.610 1.00 0.00 C ATOM 434 CG1 VAL 55 -7.758 4.437 -2.515 1.00 0.00 C ATOM 435 CG2 VAL 55 -7.030 6.756 -3.093 1.00 0.00 C ATOM 436 N LYS 56 -6.648 2.997 -5.573 1.00 0.00 N ATOM 437 CA LYS 56 -6.913 1.615 -5.956 1.00 0.00 C ATOM 438 C LYS 56 -5.617 0.855 -6.210 1.00 0.00 C ATOM 439 O LYS 56 -5.529 -0.345 -5.954 1.00 0.00 O ATOM 440 CB LYS 56 -7.804 1.564 -7.197 1.00 0.00 C ATOM 441 CG LYS 56 -9.245 1.994 -6.956 1.00 0.00 C ATOM 442 CD LYS 56 -10.075 1.887 -8.225 1.00 0.00 C ATOM 443 CE LYS 56 -11.514 2.326 -7.987 1.00 0.00 C ATOM 444 NZ LYS 56 -12.338 2.229 -9.222 1.00 0.00 N ATOM 445 N GLU 57 -4.614 1.564 -6.717 1.00 0.00 N ATOM 446 CA GLU 57 -3.310 0.966 -6.979 1.00 0.00 C ATOM 447 C GLU 57 -2.705 0.385 -5.707 1.00 0.00 C ATOM 448 O GLU 57 -2.209 -0.742 -5.701 1.00 0.00 O ATOM 449 CB GLU 57 -2.359 1.999 -7.589 1.00 0.00 C ATOM 450 CG GLU 57 -2.637 2.324 -9.049 1.00 0.00 C ATOM 451 CD GLU 57 -1.882 3.547 -9.489 1.00 0.00 C ATOM 452 OE1 GLU 57 -1.298 4.195 -8.653 1.00 0.00 O ATOM 453 OE2 GLU 57 -1.796 3.775 -10.673 1.00 0.00 O ATOM 454 N PHE 58 -2.749 1.160 -4.629 1.00 0.00 N ATOM 455 CA PHE 58 -2.131 0.760 -3.371 1.00 0.00 C ATOM 456 C PHE 58 -2.819 -0.464 -2.783 1.00 0.00 C ATOM 457 O PHE 58 -2.162 -1.413 -2.354 1.00 0.00 O ATOM 458 CB PHE 58 -2.163 1.915 -2.368 1.00 0.00 C ATOM 459 CG PHE 58 -1.426 1.631 -1.090 1.00 0.00 C ATOM 460 CD1 PHE 58 -0.040 1.595 -1.067 1.00 0.00 C ATOM 461 CD2 PHE 58 -2.116 1.397 0.089 1.00 0.00 C ATOM 462 CE1 PHE 58 0.640 1.332 0.108 1.00 0.00 C ATOM 463 CE2 PHE 58 -1.439 1.136 1.265 1.00 0.00 C ATOM 464 CZ PHE 58 -0.059 1.104 1.274 1.00 0.00 C ATOM 465 N ILE 59 -4.149 -0.436 -2.763 1.00 0.00 N ATOM 466 CA ILE 59 -4.926 -1.475 -2.100 1.00 0.00 C ATOM 467 C ILE 59 -5.009 -2.733 -2.955 1.00 0.00 C ATOM 468 O ILE 59 -5.258 -3.826 -2.446 1.00 0.00 O ATOM 469 CB ILE 59 -6.351 -0.993 -1.773 1.00 0.00 C ATOM 470 CG1 ILE 59 -7.121 -0.694 -3.062 1.00 0.00 C ATOM 471 CG2 ILE 59 -6.305 0.237 -0.879 1.00 0.00 C ATOM 472 CD1 ILE 59 -8.531 -0.196 -2.829 1.00 0.00 C ATOM 473 N GLU 60 -4.799 -2.571 -4.257 1.00 0.00 N ATOM 474 CA GLU 60 -4.657 -3.709 -5.157 1.00 0.00 C ATOM 475 C GLU 60 -3.298 -4.378 -4.989 1.00 0.00 C ATOM 476 O GLU 60 -3.176 -5.597 -5.117 1.00 0.00 O ATOM 477 CB GLU 60 -4.850 -3.270 -6.610 1.00 0.00 C ATOM 478 CG GLU 60 -6.301 -3.038 -7.008 1.00 0.00 C ATOM 479 CD GLU 60 -6.401 -2.467 -8.395 1.00 0.00 C ATOM 480 OE1 GLU 60 -5.381 -2.190 -8.979 1.00 0.00 O ATOM 481 OE2 GLU 60 -7.491 -2.411 -8.916 1.00 0.00 O ATOM 482 N GLY 61 -2.281 -3.575 -4.702 1.00 0.00 N ATOM 483 CA GLY 61 -0.975 -4.099 -4.318 1.00 0.00 C ATOM 484 C GLY 61 -1.056 -4.876 -3.010 1.00 0.00 C ATOM 485 O GLY 61 -0.453 -5.939 -2.870 1.00 0.00 O ATOM 486 N LEU 62 -1.808 -4.339 -2.055 1.00 0.00 N ATOM 487 CA LEU 62 -2.090 -5.049 -0.812 1.00 0.00 C ATOM 488 C LEU 62 -2.846 -6.345 -1.078 1.00 0.00 C ATOM 489 O LEU 62 -2.595 -7.363 -0.434 1.00 0.00 O ATOM 490 CB LEU 62 -2.887 -4.152 0.142 1.00 0.00 C ATOM 491 CG LEU 62 -2.108 -2.966 0.727 1.00 0.00 C ATOM 492 CD1 LEU 62 -3.063 -2.010 1.429 1.00 0.00 C ATOM 493 CD2 LEU 62 -1.051 -3.478 1.692 1.00 0.00 C ATOM 494 N GLY 63 -3.773 -6.297 -2.028 1.00 0.00 N ATOM 495 CA GLY 63 -4.508 -7.489 -2.440 1.00 0.00 C ATOM 496 C GLY 63 -3.590 -8.492 -3.125 1.00 0.00 C ATOM 497 O GLY 63 -3.776 -9.703 -3.003 1.00 0.00 O ATOM 498 N TYR 64 -2.597 -7.982 -3.847 1.00 0.00 N ATOM 499 CA TYR 64 -1.656 -8.834 -4.564 1.00 0.00 C ATOM 500 C TYR 64 -0.933 -9.779 -3.614 1.00 0.00 C ATOM 501 O TYR 64 -0.948 -10.996 -3.802 1.00 0.00 O ATOM 502 CB TYR 64 -0.640 -7.981 -5.329 1.00 0.00 C ATOM 503 CG TYR 64 0.407 -8.789 -6.065 1.00 0.00 C ATOM 504 CD1 TYR 64 0.157 -9.293 -7.332 1.00 0.00 C ATOM 505 CD2 TYR 64 1.643 -9.042 -5.488 1.00 0.00 C ATOM 506 CE1 TYR 64 1.111 -10.031 -8.007 1.00 0.00 C ATOM 507 CE2 TYR 64 2.604 -9.776 -6.154 1.00 0.00 C ATOM 508 CZ TYR 64 2.333 -10.271 -7.414 1.00 0.00 C ATOM 509 OH TYR 64 3.288 -11.004 -8.082 1.00 0.00 H ATOM 510 N SER 65 -0.302 -9.214 -2.591 1.00 0.00 N ATOM 511 CA SER 65 0.426 -10.006 -1.608 1.00 0.00 C ATOM 512 C SER 65 -0.327 -10.069 -0.286 1.00 0.00 C ATOM 513 O SER 65 -0.573 -9.044 0.350 1.00 0.00 O ATOM 514 CB SER 65 1.813 -9.431 -1.397 1.00 0.00 C ATOM 515 OG SER 65 2.467 -10.019 -0.306 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 498 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 50.95 79.0 124 100.0 124 ARMSMC SECONDARY STRUCTURE . . 28.03 92.7 82 100.0 82 ARMSMC SURFACE . . . . . . . . 53.74 74.4 90 100.0 90 ARMSMC BURIED . . . . . . . . 42.71 91.2 34 100.0 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 79.86 52.0 50 100.0 50 ARMSSC1 RELIABLE SIDE CHAINS . 80.22 51.1 47 100.0 47 ARMSSC1 SECONDARY STRUCTURE . . 72.92 59.4 32 100.0 32 ARMSSC1 SURFACE . . . . . . . . 83.54 48.7 39 100.0 39 ARMSSC1 BURIED . . . . . . . . 65.19 63.6 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 72.37 56.1 41 100.0 41 ARMSSC2 RELIABLE SIDE CHAINS . 76.91 52.8 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 73.36 55.6 27 100.0 27 ARMSSC2 SURFACE . . . . . . . . 80.90 50.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 40.92 72.7 11 100.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.15 41.2 17 100.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 66.85 46.7 15 100.0 15 ARMSSC3 SECONDARY STRUCTURE . . 88.39 27.3 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 79.19 43.8 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 59.16 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 80.13 33.3 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 80.13 33.3 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 75.20 40.0 5 100.0 5 ARMSSC4 SURFACE . . . . . . . . 80.13 33.3 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.22 (Number of atoms: 63) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.22 63 100.0 63 CRMSCA CRN = ALL/NP . . . . . 0.1940 CRMSCA SECONDARY STRUCTURE . . 13.20 41 100.0 41 CRMSCA SURFACE . . . . . . . . 12.86 46 100.0 46 CRMSCA BURIED . . . . . . . . 10.31 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.24 309 100.0 309 CRMSMC SECONDARY STRUCTURE . . 13.17 201 100.0 201 CRMSMC SURFACE . . . . . . . . 12.83 226 100.0 226 CRMSMC BURIED . . . . . . . . 10.47 83 100.0 83 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 13.66 246 32.8 750 CRMSSC RELIABLE SIDE CHAINS . 13.66 226 31.0 730 CRMSSC SECONDARY STRUCTURE . . 14.92 158 32.6 484 CRMSSC SURFACE . . . . . . . . 14.58 184 33.2 554 CRMSSC BURIED . . . . . . . . 10.42 62 31.6 196 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.92 498 49.7 1002 CRMSALL SECONDARY STRUCTURE . . 14.02 322 49.7 648 CRMSALL SURFACE . . . . . . . . 13.66 368 49.9 738 CRMSALL BURIED . . . . . . . . 10.53 130 49.2 264 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.920 1.000 0.500 63 100.0 63 ERRCA SECONDARY STRUCTURE . . 11.936 1.000 0.500 41 100.0 41 ERRCA SURFACE . . . . . . . . 11.482 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 9.399 1.000 0.500 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.930 1.000 0.500 309 100.0 309 ERRMC SECONDARY STRUCTURE . . 11.868 1.000 0.500 201 100.0 201 ERRMC SURFACE . . . . . . . . 11.474 1.000 0.500 226 100.0 226 ERRMC BURIED . . . . . . . . 9.452 1.000 0.500 83 100.0 83 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.207 1.000 0.500 246 32.8 750 ERRSC RELIABLE SIDE CHAINS . 12.163 1.000 0.500 226 31.0 730 ERRSC SECONDARY STRUCTURE . . 13.387 1.000 0.500 158 32.6 484 ERRSC SURFACE . . . . . . . . 12.965 1.000 0.500 184 33.2 554 ERRSC BURIED . . . . . . . . 9.959 1.000 0.500 62 31.6 196 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.514 1.000 0.500 498 49.7 1002 ERRALL SECONDARY STRUCTURE . . 12.575 1.000 0.500 322 49.7 648 ERRALL SURFACE . . . . . . . . 12.141 1.000 0.500 368 49.9 738 ERRALL BURIED . . . . . . . . 9.741 1.000 0.500 130 49.2 264 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 2 12 30 63 63 DISTCA CA (P) 0.00 1.59 3.17 19.05 47.62 63 DISTCA CA (RMS) 0.00 1.89 1.98 3.93 6.64 DISTCA ALL (N) 0 1 15 58 234 498 1002 DISTALL ALL (P) 0.00 0.10 1.50 5.79 23.35 1002 DISTALL ALL (RMS) 0.00 1.89 2.57 3.72 6.97 DISTALL END of the results output