####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 63 ( 498), selected 63 , name T0553TS419_1-D1 # Molecule2: number of CA atoms 63 ( 1002), selected 63 , name T0553-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0553TS419_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 63 3 - 65 3.85 3.85 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 35 - 65 1.87 5.56 LCS_AVERAGE: 40.04 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 41 - 65 0.99 6.37 LCS_AVERAGE: 27.77 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 63 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 3 V 3 3 3 63 0 3 3 3 4 5 26 28 33 40 50 55 63 63 63 63 63 63 63 63 LCS_GDT F 4 F 4 3 3 63 1 3 3 5 5 5 32 36 48 53 58 62 63 63 63 63 63 63 63 63 LCS_GDT K 5 K 5 3 3 63 0 7 15 22 26 29 36 47 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT R 6 R 6 3 5 63 1 3 4 6 14 19 27 35 47 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT V 7 V 7 4 23 63 3 4 5 7 10 15 22 28 43 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT A 8 A 8 4 23 63 3 4 5 8 11 15 22 27 35 45 54 62 63 63 63 63 63 63 63 63 LCS_GDT G 9 G 9 4 23 63 3 4 8 13 19 21 30 35 42 49 56 62 63 63 63 63 63 63 63 63 LCS_GDT I 10 I 10 4 23 63 3 4 14 22 26 29 32 40 49 54 59 62 63 63 63 63 63 63 63 63 LCS_GDT K 11 K 11 17 23 63 3 4 5 5 14 23 31 42 49 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT D 12 D 12 18 23 63 11 16 17 22 26 32 40 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT K 13 K 13 18 23 63 11 16 17 22 26 32 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT A 14 A 14 18 23 63 11 16 17 22 26 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT A 15 A 15 18 23 63 11 16 17 22 26 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT I 16 I 16 18 23 63 11 16 17 22 29 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT K 17 K 17 18 23 63 11 16 17 25 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT T 18 T 18 18 23 63 11 16 17 25 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT L 19 L 19 18 23 63 11 16 17 22 29 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT I 20 I 20 18 23 63 11 16 17 22 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT S 21 S 21 18 23 63 11 16 17 22 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT A 22 A 22 18 23 63 11 16 17 22 29 35 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT A 23 A 23 18 23 63 8 16 17 22 28 35 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT Y 24 Y 24 18 23 63 9 16 17 22 29 35 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT R 25 R 25 18 23 63 8 16 17 22 26 29 39 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT Q 26 Q 26 18 23 63 6 16 17 21 26 28 38 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT I 27 I 27 18 23 63 6 16 17 22 26 29 38 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT F 28 F 28 18 23 63 4 5 17 22 26 29 38 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT E 29 E 29 18 23 63 4 5 15 22 26 29 39 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT R 30 R 30 5 23 63 4 5 5 9 16 26 38 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT D 31 D 31 3 20 63 3 3 7 11 14 21 29 39 47 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT I 32 I 32 10 14 63 4 9 10 12 17 22 29 39 48 55 59 62 63 63 63 63 63 63 63 63 LCS_GDT A 33 A 33 10 14 63 6 9 10 12 18 22 33 41 48 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT P 34 P 34 10 14 63 6 9 10 12 18 23 33 44 48 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT Y 35 Y 35 10 31 63 6 9 10 19 27 35 39 45 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT I 36 I 36 10 31 63 6 9 10 19 28 35 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT A 37 A 37 10 31 63 6 9 11 21 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT Q 38 Q 38 10 31 63 6 9 10 20 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT N 39 N 39 10 31 63 6 9 10 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT E 40 E 40 20 31 63 6 9 10 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT F 41 F 41 25 31 63 8 17 24 26 29 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT S 42 S 42 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT G 43 G 43 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT W 44 W 44 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT E 45 E 45 25 31 63 9 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT S 46 S 46 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT K 47 K 47 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT L 48 L 48 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT G 49 G 49 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT N 50 N 50 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT G 51 G 51 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT E 52 E 52 25 31 63 4 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT I 53 I 53 25 31 63 3 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT T 54 T 54 25 31 63 9 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT V 55 V 55 25 31 63 9 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT K 56 K 56 25 31 63 9 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT E 57 E 57 25 31 63 9 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT F 58 F 58 25 31 63 9 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT I 59 I 59 25 31 63 9 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT E 60 E 60 25 31 63 9 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT G 61 G 61 25 31 63 9 15 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT L 62 L 62 25 31 63 6 15 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT G 63 G 63 25 31 63 6 15 24 26 30 35 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT Y 64 Y 64 25 31 63 8 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_GDT S 65 S 65 25 31 63 6 15 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 LCS_AVERAGE LCS_A: 55.93 ( 27.77 40.04 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 17 24 26 30 36 41 48 51 56 59 62 63 63 63 63 63 63 63 63 GDT PERCENT_AT 17.46 26.98 38.10 41.27 47.62 57.14 65.08 76.19 80.95 88.89 93.65 98.41 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.29 0.59 0.93 1.06 1.51 2.00 2.27 2.76 2.94 3.41 3.54 3.77 3.85 3.85 3.85 3.85 3.85 3.85 3.85 3.85 GDT RMS_ALL_AT 4.83 7.65 6.56 6.25 5.66 5.08 4.69 4.22 4.11 3.94 3.89 3.85 3.85 3.85 3.85 3.85 3.85 3.85 3.85 3.85 # Checking swapping # possible swapping detected: F 4 F 4 # possible swapping detected: D 12 D 12 # possible swapping detected: Y 24 Y 24 # possible swapping detected: E 29 E 29 # possible swapping detected: Y 35 Y 35 # possible swapping detected: E 40 E 40 # possible swapping detected: F 41 F 41 # possible swapping detected: E 60 E 60 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 3 V 3 8.768 0 0.520 0.937 13.111 5.119 2.925 LGA F 4 F 4 6.147 0 0.578 1.176 10.501 25.476 11.861 LGA K 5 K 5 5.418 0 0.647 1.314 13.392 20.595 10.847 LGA R 6 R 6 7.528 0 0.610 1.079 17.097 12.738 4.762 LGA V 7 V 7 7.199 0 0.681 1.323 10.158 11.786 9.320 LGA A 8 A 8 9.333 0 0.220 0.238 10.525 1.548 1.238 LGA G 9 G 9 8.812 0 0.427 0.427 8.812 4.405 4.405 LGA I 10 I 10 6.080 0 0.067 1.474 7.141 26.310 20.893 LGA K 11 K 11 6.494 0 0.389 1.112 15.345 17.262 7.989 LGA D 12 D 12 4.420 0 0.168 1.287 4.598 37.262 41.190 LGA K 13 K 13 3.636 0 0.066 0.975 4.074 45.119 56.720 LGA A 14 A 14 3.368 0 0.034 0.053 3.706 50.119 48.762 LGA A 15 A 15 3.149 0 0.056 0.061 3.858 53.571 51.524 LGA I 16 I 16 2.521 0 0.053 0.702 2.768 62.976 63.929 LGA K 17 K 17 1.699 0 0.062 0.780 4.823 72.857 58.571 LGA T 18 T 18 1.550 0 0.067 0.110 1.912 72.857 72.857 LGA L 19 L 19 2.045 0 0.085 1.197 4.899 68.810 58.036 LGA I 20 I 20 1.747 0 0.083 1.123 4.193 75.000 67.976 LGA S 21 S 21 1.881 0 0.046 0.071 2.190 70.833 71.508 LGA A 22 A 22 2.149 0 0.036 0.044 2.709 64.881 64.857 LGA A 23 A 23 2.442 0 0.065 0.067 2.834 62.857 61.714 LGA Y 24 Y 24 2.305 0 0.061 1.176 6.318 59.167 45.595 LGA R 25 R 25 3.972 0 0.099 1.186 9.093 39.167 30.346 LGA Q 26 Q 26 4.386 0 0.051 1.329 5.037 34.524 40.317 LGA I 27 I 27 4.169 0 0.328 0.343 4.532 35.714 37.202 LGA F 28 F 28 3.999 0 0.163 0.278 7.809 45.000 28.139 LGA E 29 E 29 3.829 0 0.334 1.223 7.884 43.333 33.069 LGA R 30 R 30 4.415 0 0.540 2.028 8.320 29.405 19.957 LGA D 31 D 31 7.734 0 0.218 0.821 11.572 8.095 4.226 LGA I 32 I 32 7.283 0 0.541 1.409 9.362 7.143 18.393 LGA A 33 A 33 7.208 0 0.061 0.088 7.573 16.667 14.762 LGA P 34 P 34 6.652 0 0.098 0.095 8.866 17.738 12.245 LGA Y 35 Y 35 5.401 0 0.104 1.302 11.191 30.952 15.913 LGA I 36 I 36 4.096 0 0.039 0.107 6.536 43.929 34.881 LGA A 37 A 37 3.151 0 0.096 0.091 3.771 51.786 50.095 LGA Q 38 Q 38 3.740 0 0.161 0.761 6.011 45.000 35.979 LGA N 39 N 39 2.344 0 0.093 0.781 4.011 55.952 59.405 LGA E 40 E 40 2.733 0 0.089 0.979 4.035 52.262 51.270 LGA F 41 F 41 3.535 0 0.276 1.171 10.453 53.690 27.662 LGA S 42 S 42 2.155 0 0.099 0.611 3.088 64.881 63.730 LGA G 43 G 43 2.280 0 0.084 0.084 2.301 64.762 64.762 LGA W 44 W 44 2.062 0 0.053 1.076 5.715 68.810 53.639 LGA E 45 E 45 1.595 0 0.079 0.625 2.638 79.405 70.476 LGA S 46 S 46 0.899 0 0.062 0.089 1.428 85.952 84.444 LGA K 47 K 47 1.615 0 0.060 1.033 2.122 75.000 75.820 LGA L 48 L 48 1.550 0 0.039 0.235 2.800 69.048 66.012 LGA G 49 G 49 2.287 0 0.061 0.061 3.298 61.190 61.190 LGA N 50 N 50 3.064 0 0.060 1.112 5.454 53.571 44.881 LGA G 51 G 51 2.706 0 0.785 0.785 4.385 54.048 54.048 LGA E 52 E 52 1.395 0 0.087 1.031 6.191 79.286 63.228 LGA I 53 I 53 1.549 0 0.118 1.298 3.893 72.976 64.345 LGA T 54 T 54 2.255 0 0.080 1.040 4.404 68.810 63.197 LGA V 55 V 55 2.705 0 0.108 0.299 3.389 59.048 56.190 LGA K 56 K 56 2.677 0 0.055 1.142 4.196 57.143 54.233 LGA E 57 E 57 2.086 0 0.058 0.996 5.693 66.786 54.392 LGA F 58 F 58 2.074 0 0.057 0.153 2.492 64.762 69.264 LGA I 59 I 59 2.564 0 0.073 1.361 3.732 59.048 59.286 LGA E 60 E 60 2.279 0 0.057 0.614 3.975 64.762 56.878 LGA G 61 G 61 1.952 0 0.076 0.076 2.117 66.786 66.786 LGA L 62 L 62 2.496 0 0.095 1.395 4.404 60.952 59.464 LGA G 63 G 63 3.323 0 0.118 0.118 3.613 50.119 50.119 LGA Y 64 Y 64 2.985 0 0.146 0.857 3.609 51.905 57.698 LGA S 65 S 65 2.382 0 0.568 0.761 3.706 61.190 58.810 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 63 252 252 100.00 498 498 100.00 63 SUMMARY(RMSD_GDC): 3.845 3.787 4.847 49.082 44.829 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 63 63 4.0 48 2.76 61.111 59.473 1.677 LGA_LOCAL RMSD: 2.762 Number of atoms: 48 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.216 Number of assigned atoms: 63 Std_ASGN_ATOMS RMSD: 3.845 Standard rmsd on all 63 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.970842 * X + -0.034440 * Y + -0.237232 * Z + -44.614117 Y_new = 0.237585 * X + 0.269977 * Y + 0.933095 * Z + -85.385513 Z_new = 0.031911 * X + -0.962251 * Y + 0.270287 * Z + 36.102200 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.240004 -0.031917 -1.296962 [DEG: 13.7512 -1.8287 -74.3104 ] ZXZ: -2.892626 1.297105 3.108441 [DEG: -165.7352 74.3186 178.1006 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0553TS419_1-D1 REMARK 2: T0553-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0553TS419_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 63 63 4.0 48 2.76 59.473 3.85 REMARK ---------------------------------------------------------- MOLECULE T0553TS419_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0553 REMARK MODEL 1 REMARK PARENT N/A ATOM 18 N VAL 3 8.041 2.611 -3.365 1.00 0.00 N ATOM 19 CA VAL 3 8.361 1.380 -4.037 1.00 0.00 C ATOM 20 CB VAL 3 7.723 0.205 -3.347 1.00 0.00 C ATOM 21 CG1 VAL 3 8.400 0.049 -1.975 1.00 0.00 C ATOM 22 CG2 VAL 3 6.206 0.447 -3.219 1.00 0.00 C ATOM 23 C VAL 3 8.051 1.312 -5.512 1.00 0.00 C ATOM 24 O VAL 3 8.948 1.400 -6.347 1.00 0.00 O ATOM 25 N PHE 4 6.763 1.169 -5.879 1.00 0.00 N ATOM 26 CA PHE 4 6.389 0.960 -7.251 1.00 0.00 C ATOM 27 CB PHE 4 5.120 0.105 -7.377 1.00 0.00 C ATOM 28 CG PHE 4 5.238 -0.795 -8.557 1.00 0.00 C ATOM 29 CD1 PHE 4 6.135 -1.837 -8.505 1.00 0.00 C ATOM 30 CD2 PHE 4 4.448 -0.652 -9.673 1.00 0.00 C ATOM 31 CE1 PHE 4 6.285 -2.706 -9.559 1.00 0.00 C ATOM 32 CE2 PHE 4 4.600 -1.522 -10.731 1.00 0.00 C ATOM 33 CZ PHE 4 5.515 -2.545 -10.683 1.00 0.00 C ATOM 34 C PHE 4 6.327 2.289 -7.935 1.00 0.00 C ATOM 35 O PHE 4 6.398 2.387 -9.158 1.00 0.00 O ATOM 36 N LYS 5 6.113 3.351 -7.136 1.00 0.00 N ATOM 37 CA LYS 5 6.152 4.693 -7.635 1.00 0.00 C ATOM 38 CB LYS 5 5.727 5.731 -6.581 1.00 0.00 C ATOM 39 CG LYS 5 4.272 5.515 -6.136 1.00 0.00 C ATOM 40 CD LYS 5 3.251 5.580 -7.281 1.00 0.00 C ATOM 41 CE LYS 5 1.892 4.936 -6.967 1.00 0.00 C ATOM 42 NZ LYS 5 0.903 5.957 -6.557 1.00 0.00 N ATOM 43 C LYS 5 7.566 4.895 -8.080 1.00 0.00 C ATOM 44 O LYS 5 7.872 5.810 -8.845 1.00 0.00 O ATOM 45 N ARG 6 8.490 4.098 -7.507 1.00 0.00 N ATOM 46 CA ARG 6 9.845 4.092 -7.975 1.00 0.00 C ATOM 47 CB ARG 6 10.846 3.447 -6.999 1.00 0.00 C ATOM 48 CG ARG 6 12.294 3.842 -7.301 1.00 0.00 C ATOM 49 CD ARG 6 13.197 3.851 -6.065 1.00 0.00 C ATOM 50 NE ARG 6 13.797 2.499 -5.903 1.00 0.00 N ATOM 51 CZ ARG 6 13.847 1.925 -4.666 1.00 0.00 C ATOM 52 NH1 ARG 6 13.251 2.539 -3.602 1.00 0.00 H ATOM 53 NH2 ARG 6 14.492 0.735 -4.494 1.00 0.00 H ATOM 54 C ARG 6 9.916 3.386 -9.310 1.00 0.00 C ATOM 55 O ARG 6 10.789 3.678 -10.120 1.00 0.00 O ATOM 56 N VAL 7 9.068 2.363 -9.540 1.00 0.00 N ATOM 57 CA VAL 7 9.048 1.604 -10.771 1.00 0.00 C ATOM 58 CB VAL 7 8.523 0.207 -10.682 1.00 0.00 C ATOM 59 CG1 VAL 7 6.999 0.267 -10.786 1.00 0.00 C ATOM 60 CG2 VAL 7 9.186 -0.632 -11.789 1.00 0.00 C ATOM 61 C VAL 7 8.238 2.242 -11.863 1.00 0.00 C ATOM 62 O VAL 7 8.309 1.758 -12.992 1.00 0.00 O ATOM 63 N ALA 8 7.416 3.272 -11.544 1.00 0.00 N ATOM 64 CA ALA 8 6.397 3.862 -12.386 1.00 0.00 C ATOM 65 CB ALA 8 6.094 5.330 -12.041 1.00 0.00 C ATOM 66 C ALA 8 6.752 3.800 -13.841 1.00 0.00 C ATOM 67 O ALA 8 7.854 4.171 -14.244 1.00 0.00 O ATOM 68 N GLY 9 5.778 3.342 -14.667 1.00 0.00 N ATOM 69 CA GLY 9 6.006 3.118 -16.066 1.00 0.00 C ATOM 70 C GLY 9 6.617 1.763 -16.241 1.00 0.00 C ATOM 71 O GLY 9 7.769 1.658 -16.660 1.00 0.00 O ATOM 72 N ILE 10 5.811 0.713 -15.936 1.00 0.00 N ATOM 73 CA ILE 10 6.121 -0.696 -15.887 1.00 0.00 C ATOM 74 CB ILE 10 4.943 -1.563 -16.283 1.00 0.00 C ATOM 75 CG2 ILE 10 4.524 -1.193 -17.717 1.00 0.00 C ATOM 76 CG1 ILE 10 5.188 -3.067 -16.050 1.00 0.00 C ATOM 77 CD1 ILE 10 6.202 -3.723 -16.987 1.00 0.00 C ATOM 78 C ILE 10 7.304 -1.015 -16.730 1.00 0.00 C ATOM 79 O ILE 10 7.245 -1.102 -17.955 1.00 0.00 O ATOM 80 N LYS 11 8.435 -1.251 -16.043 1.00 0.00 N ATOM 81 CA LYS 11 9.633 -1.554 -16.744 1.00 0.00 C ATOM 82 CB LYS 11 10.878 -0.886 -16.134 1.00 0.00 C ATOM 83 CG LYS 11 10.819 0.643 -16.179 1.00 0.00 C ATOM 84 CD LYS 11 10.695 1.209 -17.594 1.00 0.00 C ATOM 85 CE LYS 11 10.304 2.688 -17.638 1.00 0.00 C ATOM 86 NZ LYS 11 11.329 3.510 -16.960 1.00 0.00 N ATOM 87 C LYS 11 9.808 -3.026 -16.638 1.00 0.00 C ATOM 88 O LYS 11 10.660 -3.512 -15.897 1.00 0.00 O ATOM 89 N ASP 12 8.996 -3.772 -17.404 1.00 0.00 N ATOM 90 CA ASP 12 9.114 -5.198 -17.425 1.00 0.00 C ATOM 91 CB ASP 12 10.560 -5.649 -17.724 1.00 0.00 C ATOM 92 CG ASP 12 10.634 -7.156 -17.951 1.00 0.00 C ATOM 93 OD1 ASP 12 9.614 -7.756 -18.381 1.00 0.00 O ATOM 94 OD2 ASP 12 11.732 -7.727 -17.716 1.00 0.00 O ATOM 95 C ASP 12 8.687 -5.800 -16.124 1.00 0.00 C ATOM 96 O ASP 12 8.676 -5.157 -15.075 1.00 0.00 O ATOM 97 N LYS 13 8.345 -7.101 -16.200 1.00 0.00 N ATOM 98 CA LYS 13 7.896 -7.936 -15.131 1.00 0.00 C ATOM 99 CB LYS 13 7.690 -9.397 -15.567 1.00 0.00 C ATOM 100 CG LYS 13 7.211 -10.308 -14.435 1.00 0.00 C ATOM 101 CD LYS 13 6.860 -11.725 -14.894 1.00 0.00 C ATOM 102 CE LYS 13 8.069 -12.663 -14.935 1.00 0.00 C ATOM 103 NZ LYS 13 7.643 -14.031 -15.308 1.00 0.00 N ATOM 104 C LYS 13 8.962 -7.955 -14.084 1.00 0.00 C ATOM 105 O LYS 13 8.664 -8.090 -12.900 1.00 0.00 O ATOM 106 N ALA 14 10.241 -7.877 -14.500 1.00 0.00 N ATOM 107 CA ALA 14 11.327 -7.918 -13.560 1.00 0.00 C ATOM 108 CB ALA 14 12.702 -7.944 -14.245 1.00 0.00 C ATOM 109 C ALA 14 11.303 -6.726 -12.638 1.00 0.00 C ATOM 110 O ALA 14 11.429 -6.887 -11.426 1.00 0.00 O ATOM 111 N ALA 15 11.132 -5.501 -13.181 1.00 0.00 N ATOM 112 CA ALA 15 11.134 -4.298 -12.383 1.00 0.00 C ATOM 113 CB ALA 15 11.008 -3.016 -13.221 1.00 0.00 C ATOM 114 C ALA 15 9.960 -4.348 -11.471 1.00 0.00 C ATOM 115 O ALA 15 10.006 -3.937 -10.312 1.00 0.00 O ATOM 116 N ILE 16 8.865 -4.878 -12.020 1.00 0.00 N ATOM 117 CA ILE 16 7.603 -5.037 -11.377 1.00 0.00 C ATOM 118 CB ILE 16 6.728 -5.822 -12.298 1.00 0.00 C ATOM 119 CG2 ILE 16 5.557 -6.408 -11.499 1.00 0.00 C ATOM 120 CG1 ILE 16 6.409 -4.980 -13.547 1.00 0.00 C ATOM 121 CD1 ILE 16 5.824 -5.775 -14.712 1.00 0.00 C ATOM 122 C ILE 16 7.798 -5.873 -10.150 1.00 0.00 C ATOM 123 O ILE 16 7.409 -5.479 -9.053 1.00 0.00 O ATOM 124 N LYS 17 8.448 -7.042 -10.297 1.00 0.00 N ATOM 125 CA LYS 17 8.611 -7.914 -9.170 1.00 0.00 C ATOM 126 CB LYS 17 9.157 -9.308 -9.530 1.00 0.00 C ATOM 127 CG LYS 17 10.536 -9.325 -10.184 1.00 0.00 C ATOM 128 CD LYS 17 11.106 -10.740 -10.266 1.00 0.00 C ATOM 129 CE LYS 17 12.266 -10.886 -11.244 1.00 0.00 C ATOM 130 NZ LYS 17 12.521 -12.322 -11.489 1.00 0.00 N ATOM 131 C LYS 17 9.506 -7.282 -8.156 1.00 0.00 C ATOM 132 O LYS 17 9.317 -7.457 -6.954 1.00 0.00 O ATOM 133 N THR 18 10.518 -6.528 -8.616 1.00 0.00 N ATOM 134 CA THR 18 11.456 -5.955 -7.699 1.00 0.00 C ATOM 135 CB THR 18 12.548 -5.199 -8.394 1.00 0.00 C ATOM 136 OG1 THR 18 13.237 -6.058 -9.291 1.00 0.00 O ATOM 137 CG2 THR 18 13.524 -4.663 -7.332 1.00 0.00 C ATOM 138 C THR 18 10.756 -4.998 -6.788 1.00 0.00 C ATOM 139 O THR 18 10.963 -5.021 -5.576 1.00 0.00 O ATOM 140 N LEU 19 9.914 -4.119 -7.359 1.00 0.00 N ATOM 141 CA LEU 19 9.274 -3.093 -6.591 1.00 0.00 C ATOM 142 CB LEU 19 8.975 -1.836 -7.403 1.00 0.00 C ATOM 143 CG LEU 19 10.358 -1.282 -7.801 1.00 0.00 C ATOM 144 CD1 LEU 19 10.316 0.136 -8.358 1.00 0.00 C ATOM 145 CD2 LEU 19 11.344 -1.405 -6.630 1.00 0.00 C ATOM 146 C LEU 19 8.171 -3.588 -5.715 1.00 0.00 C ATOM 147 O LEU 19 7.884 -2.975 -4.688 1.00 0.00 O ATOM 148 N ILE 20 7.469 -4.668 -6.101 1.00 0.00 N ATOM 149 CA ILE 20 6.545 -5.207 -5.148 1.00 0.00 C ATOM 150 CB ILE 20 5.739 -6.366 -5.667 1.00 0.00 C ATOM 151 CG2 ILE 20 6.695 -7.466 -6.142 1.00 0.00 C ATOM 152 CG1 ILE 20 4.720 -6.833 -4.612 1.00 0.00 C ATOM 153 CD1 ILE 20 3.659 -7.784 -5.168 1.00 0.00 C ATOM 154 C ILE 20 7.345 -5.681 -3.966 1.00 0.00 C ATOM 155 O ILE 20 7.028 -5.367 -2.822 1.00 0.00 O ATOM 156 N SER 21 8.463 -6.391 -4.215 1.00 0.00 N ATOM 157 CA SER 21 9.233 -6.973 -3.148 1.00 0.00 C ATOM 158 CB SER 21 10.503 -7.673 -3.654 1.00 0.00 C ATOM 159 OG SER 21 10.165 -8.677 -4.595 1.00 0.00 O ATOM 160 C SER 21 9.684 -5.895 -2.216 1.00 0.00 C ATOM 161 O SER 21 9.752 -6.109 -1.005 1.00 0.00 O ATOM 162 N ALA 22 10.035 -4.715 -2.762 1.00 0.00 N ATOM 163 CA ALA 22 10.517 -3.633 -1.953 1.00 0.00 C ATOM 164 CB ALA 22 10.995 -2.437 -2.791 1.00 0.00 C ATOM 165 C ALA 22 9.449 -3.136 -1.023 1.00 0.00 C ATOM 166 O ALA 22 9.709 -2.947 0.163 1.00 0.00 O ATOM 167 N ALA 23 8.212 -2.910 -1.514 1.00 0.00 N ATOM 168 CA ALA 23 7.196 -2.396 -0.634 1.00 0.00 C ATOM 169 CB ALA 23 5.877 -2.031 -1.323 1.00 0.00 C ATOM 170 C ALA 23 6.877 -3.402 0.423 1.00 0.00 C ATOM 171 O ALA 23 6.623 -3.050 1.575 1.00 0.00 O ATOM 172 N TYR 24 6.875 -4.694 0.056 1.00 0.00 N ATOM 173 CA TYR 24 6.472 -5.685 1.001 1.00 0.00 C ATOM 174 CB TYR 24 6.521 -7.110 0.426 1.00 0.00 C ATOM 175 CG TYR 24 5.259 -7.753 0.884 1.00 0.00 C ATOM 176 CD1 TYR 24 5.129 -8.338 2.123 1.00 0.00 C ATOM 177 CD2 TYR 24 4.173 -7.729 0.041 1.00 0.00 C ATOM 178 CE1 TYR 24 3.931 -8.904 2.499 1.00 0.00 C ATOM 179 CE2 TYR 24 2.978 -8.292 0.409 1.00 0.00 C ATOM 180 CZ TYR 24 2.854 -8.881 1.641 1.00 0.00 C ATOM 181 OH TYR 24 1.621 -9.456 2.015 1.00 0.00 H ATOM 182 C TYR 24 7.425 -5.612 2.151 1.00 0.00 C ATOM 183 O TYR 24 7.002 -5.562 3.302 1.00 0.00 O ATOM 184 N ARG 25 8.739 -5.550 1.861 1.00 0.00 N ATOM 185 CA ARG 25 9.759 -5.520 2.877 1.00 0.00 C ATOM 186 CB ARG 25 11.181 -5.603 2.307 1.00 0.00 C ATOM 187 CG ARG 25 11.486 -6.932 1.612 1.00 0.00 C ATOM 188 CD ARG 25 12.886 -6.958 1.000 1.00 0.00 C ATOM 189 NE ARG 25 13.091 -8.281 0.345 1.00 0.00 N ATOM 190 CZ ARG 25 13.250 -8.356 -1.010 1.00 0.00 C ATOM 191 NH1 ARG 25 13.163 -7.232 -1.780 1.00 0.00 H ATOM 192 NH2 ARG 25 13.501 -9.560 -1.600 1.00 0.00 H ATOM 193 C ARG 25 9.662 -4.259 3.686 1.00 0.00 C ATOM 194 O ARG 25 10.026 -4.256 4.860 1.00 0.00 O ATOM 195 N GLN 26 9.252 -3.131 3.069 1.00 0.00 N ATOM 196 CA GLN 26 9.167 -1.904 3.816 1.00 0.00 C ATOM 197 CB GLN 26 8.929 -0.684 2.906 1.00 0.00 C ATOM 198 CG GLN 26 10.111 -0.439 1.960 1.00 0.00 C ATOM 199 CD GLN 26 9.835 0.771 1.076 1.00 0.00 C ATOM 200 OE1 GLN 26 8.819 1.453 1.202 1.00 0.00 O ATOM 201 NE2 GLN 26 10.783 1.048 0.141 1.00 0.00 N ATOM 202 C GLN 26 8.068 -1.972 4.844 1.00 0.00 C ATOM 203 O GLN 26 8.261 -1.576 5.992 1.00 0.00 O ATOM 204 N ILE 27 6.874 -2.454 4.449 1.00 0.00 N ATOM 205 CA ILE 27 5.734 -2.552 5.319 1.00 0.00 C ATOM 206 CB ILE 27 4.426 -2.270 4.672 1.00 0.00 C ATOM 207 CG2 ILE 27 3.359 -2.122 5.767 1.00 0.00 C ATOM 208 CG1 ILE 27 4.583 -0.923 3.934 1.00 0.00 C ATOM 209 CD1 ILE 27 3.343 -0.433 3.187 1.00 0.00 C ATOM 210 C ILE 27 5.813 -3.708 6.275 1.00 0.00 C ATOM 211 O ILE 27 4.935 -3.888 7.115 1.00 0.00 O ATOM 212 N PHE 28 6.753 -4.639 6.037 1.00 0.00 N ATOM 213 CA PHE 28 7.094 -5.598 7.053 1.00 0.00 C ATOM 214 CB PHE 28 8.463 -6.295 6.842 1.00 0.00 C ATOM 215 CG PHE 28 8.571 -7.507 5.984 1.00 0.00 C ATOM 216 CD1 PHE 28 8.355 -7.491 4.633 1.00 0.00 C ATOM 217 CD2 PHE 28 8.985 -8.684 6.555 1.00 0.00 C ATOM 218 CE1 PHE 28 8.488 -8.620 3.862 1.00 0.00 C ATOM 219 CE2 PHE 28 9.125 -9.819 5.797 1.00 0.00 C ATOM 220 CZ PHE 28 8.872 -9.797 4.448 1.00 0.00 C ATOM 221 C PHE 28 7.507 -4.810 8.229 1.00 0.00 C ATOM 222 O PHE 28 7.184 -5.125 9.376 1.00 0.00 O ATOM 223 N GLU 29 8.274 -3.757 7.920 1.00 0.00 N ATOM 224 CA GLU 29 9.042 -3.114 8.917 1.00 0.00 C ATOM 225 CB GLU 29 8.293 -2.768 10.218 1.00 0.00 C ATOM 226 CG GLU 29 7.375 -1.557 10.035 1.00 0.00 C ATOM 227 CD GLU 29 6.659 -1.279 11.346 1.00 0.00 C ATOM 228 OE1 GLU 29 7.297 -1.437 12.420 1.00 0.00 O ATOM 229 OE2 GLU 29 5.456 -0.910 11.286 1.00 0.00 O ATOM 230 C GLU 29 10.098 -4.151 9.128 1.00 0.00 C ATOM 231 O GLU 29 11.046 -4.235 8.349 1.00 0.00 O ATOM 232 N ARG 30 10.063 -4.876 10.255 1.00 0.00 N ATOM 233 CA ARG 30 10.973 -5.978 10.407 1.00 0.00 C ATOM 234 CB ARG 30 11.273 -6.277 11.884 1.00 0.00 C ATOM 235 CG ARG 30 12.311 -5.351 12.512 1.00 0.00 C ATOM 236 CD ARG 30 13.685 -6.011 12.633 1.00 0.00 C ATOM 237 NE ARG 30 14.123 -6.390 11.259 1.00 0.00 N ATOM 238 CZ ARG 30 13.788 -7.604 10.725 1.00 0.00 C ATOM 239 NH1 ARG 30 13.030 -8.496 11.429 1.00 0.00 H ATOM 240 NH2 ARG 30 14.219 -7.930 9.473 1.00 0.00 H ATOM 241 C ARG 30 10.549 -7.292 9.812 1.00 0.00 C ATOM 242 O ARG 30 11.237 -7.857 8.961 1.00 0.00 O ATOM 243 N ASP 31 9.368 -7.803 10.233 1.00 0.00 N ATOM 244 CA ASP 31 9.073 -9.168 9.894 1.00 0.00 C ATOM 245 CB ASP 31 9.642 -10.139 10.950 1.00 0.00 C ATOM 246 CG ASP 31 9.606 -11.574 10.442 1.00 0.00 C ATOM 247 OD1 ASP 31 8.655 -11.926 9.696 1.00 0.00 O ATOM 248 OD2 ASP 31 10.541 -12.340 10.798 1.00 0.00 O ATOM 249 C ASP 31 7.591 -9.399 9.820 1.00 0.00 C ATOM 250 O ASP 31 7.001 -10.055 10.676 1.00 0.00 O ATOM 251 N ILE 32 6.958 -8.825 8.789 1.00 0.00 N ATOM 252 CA ILE 32 5.608 -9.061 8.379 1.00 0.00 C ATOM 253 CB ILE 32 4.971 -8.074 7.453 1.00 0.00 C ATOM 254 CG2 ILE 32 4.740 -6.804 8.290 1.00 0.00 C ATOM 255 CG1 ILE 32 5.660 -7.935 6.086 1.00 0.00 C ATOM 256 CD1 ILE 32 5.486 -9.097 5.107 1.00 0.00 C ATOM 257 C ILE 32 5.560 -10.402 7.744 1.00 0.00 C ATOM 258 O ILE 32 4.569 -10.724 7.106 1.00 0.00 O ATOM 259 N ALA 33 6.744 -11.020 7.602 1.00 0.00 N ATOM 260 CA ALA 33 6.946 -12.379 7.185 1.00 0.00 C ATOM 261 CB ALA 33 5.668 -13.222 7.013 1.00 0.00 C ATOM 262 C ALA 33 7.648 -12.356 5.879 1.00 0.00 C ATOM 263 O ALA 33 7.128 -11.873 4.876 1.00 0.00 O ATOM 264 N PRO 34 8.825 -12.903 5.871 1.00 0.00 N ATOM 265 CA PRO 34 9.561 -12.970 4.648 1.00 0.00 C ATOM 266 CD PRO 34 9.699 -12.863 7.034 1.00 0.00 C ATOM 267 CB PRO 34 10.955 -13.454 5.031 1.00 0.00 C ATOM 268 CG PRO 34 11.130 -12.920 6.468 1.00 0.00 C ATOM 269 C PRO 34 8.799 -13.870 3.740 1.00 0.00 C ATOM 270 O PRO 34 8.896 -13.725 2.523 1.00 0.00 O ATOM 271 N TYR 35 8.044 -14.813 4.333 1.00 0.00 N ATOM 272 CA TYR 35 7.240 -15.743 3.600 1.00 0.00 C ATOM 273 CB TYR 35 6.581 -16.791 4.516 1.00 0.00 C ATOM 274 CG TYR 35 5.688 -17.658 3.695 1.00 0.00 C ATOM 275 CD1 TYR 35 6.195 -18.714 2.973 1.00 0.00 C ATOM 276 CD2 TYR 35 4.332 -17.418 3.658 1.00 0.00 C ATOM 277 CE1 TYR 35 5.365 -19.514 2.222 1.00 0.00 C ATOM 278 CE2 TYR 35 3.498 -18.215 2.910 1.00 0.00 C ATOM 279 CZ TYR 35 4.014 -19.266 2.190 1.00 0.00 C ATOM 280 OH TYR 35 3.159 -20.084 1.423 1.00 0.00 H ATOM 281 C TYR 35 6.145 -14.997 2.908 1.00 0.00 C ATOM 282 O TYR 35 5.861 -15.240 1.737 1.00 0.00 O ATOM 283 N ILE 36 5.501 -14.058 3.627 1.00 0.00 N ATOM 284 CA ILE 36 4.395 -13.322 3.086 1.00 0.00 C ATOM 285 CB ILE 36 3.727 -12.472 4.126 1.00 0.00 C ATOM 286 CG2 ILE 36 2.647 -11.611 3.449 1.00 0.00 C ATOM 287 CG1 ILE 36 3.164 -13.389 5.227 1.00 0.00 C ATOM 288 CD1 ILE 36 2.745 -12.659 6.498 1.00 0.00 C ATOM 289 C ILE 36 4.877 -12.470 1.954 1.00 0.00 C ATOM 290 O ILE 36 4.227 -12.381 0.913 1.00 0.00 O ATOM 291 N ALA 37 6.045 -11.821 2.118 1.00 0.00 N ATOM 292 CA ALA 37 6.531 -10.985 1.059 1.00 0.00 C ATOM 293 CB ALA 37 7.874 -10.316 1.398 1.00 0.00 C ATOM 294 C ALA 37 6.753 -11.820 -0.165 1.00 0.00 C ATOM 295 O ALA 37 6.352 -11.439 -1.264 1.00 0.00 O ATOM 296 N GLN 38 7.377 -13.002 -0.004 1.00 0.00 N ATOM 297 CA GLN 38 7.712 -13.798 -1.152 1.00 0.00 C ATOM 298 CB GLN 38 8.609 -14.999 -0.796 1.00 0.00 C ATOM 299 CG GLN 38 7.948 -16.011 0.137 1.00 0.00 C ATOM 300 CD GLN 38 9.007 -16.987 0.629 1.00 0.00 C ATOM 301 OE1 GLN 38 10.065 -16.585 1.112 1.00 0.00 O ATOM 302 NE2 GLN 38 8.715 -18.309 0.513 1.00 0.00 N ATOM 303 C GLN 38 6.485 -14.292 -1.866 1.00 0.00 C ATOM 304 O GLN 38 6.413 -14.213 -3.093 1.00 0.00 O ATOM 305 N ASN 39 5.476 -14.807 -1.134 1.00 0.00 N ATOM 306 CA ASN 39 4.326 -15.360 -1.801 1.00 0.00 C ATOM 307 CB ASN 39 3.367 -16.107 -0.860 1.00 0.00 C ATOM 308 CG ASN 39 3.873 -17.533 -0.699 1.00 0.00 C ATOM 309 OD1 ASN 39 3.250 -18.472 -1.194 1.00 0.00 O ATOM 310 ND2 ASN 39 5.035 -17.705 -0.013 1.00 0.00 N ATOM 311 C ASN 39 3.532 -14.309 -2.510 1.00 0.00 C ATOM 312 O ASN 39 3.158 -14.476 -3.669 1.00 0.00 O ATOM 313 N GLU 40 3.252 -13.192 -1.825 1.00 0.00 N ATOM 314 CA GLU 40 2.428 -12.168 -2.400 1.00 0.00 C ATOM 315 CB GLU 40 2.052 -11.078 -1.390 1.00 0.00 C ATOM 316 CG GLU 40 0.840 -11.478 -0.558 1.00 0.00 C ATOM 317 CD GLU 40 0.992 -12.941 -0.171 1.00 0.00 C ATOM 318 OE1 GLU 40 0.632 -13.796 -1.023 1.00 0.00 O ATOM 319 OE2 GLU 40 1.492 -13.228 0.948 1.00 0.00 O ATOM 320 C GLU 40 3.126 -11.521 -3.546 1.00 0.00 C ATOM 321 O GLU 40 2.497 -11.204 -4.556 1.00 0.00 O ATOM 322 N PHE 41 4.448 -11.301 -3.436 1.00 0.00 N ATOM 323 CA PHE 41 5.066 -10.611 -4.527 1.00 0.00 C ATOM 324 CB PHE 41 6.512 -10.101 -4.309 1.00 0.00 C ATOM 325 CG PHE 41 7.563 -11.139 -4.500 1.00 0.00 C ATOM 326 CD1 PHE 41 7.983 -11.955 -3.477 1.00 0.00 C ATOM 327 CD2 PHE 41 8.156 -11.261 -5.737 1.00 0.00 C ATOM 328 CE1 PHE 41 8.968 -12.889 -3.698 1.00 0.00 C ATOM 329 CE2 PHE 41 9.140 -12.192 -5.963 1.00 0.00 C ATOM 330 CZ PHE 41 9.548 -13.010 -4.940 1.00 0.00 C ATOM 331 C PHE 41 5.010 -11.487 -5.743 1.00 0.00 C ATOM 332 O PHE 41 4.868 -10.985 -6.855 1.00 0.00 O ATOM 333 N SER 42 5.133 -12.820 -5.568 1.00 0.00 N ATOM 334 CA SER 42 5.116 -13.728 -6.684 1.00 0.00 C ATOM 335 CB SER 42 5.334 -15.193 -6.265 1.00 0.00 C ATOM 336 OG SER 42 5.311 -16.036 -7.407 1.00 0.00 O ATOM 337 C SER 42 3.788 -13.659 -7.384 1.00 0.00 C ATOM 338 O SER 42 3.732 -13.607 -8.611 1.00 0.00 O ATOM 339 N GLY 43 2.674 -13.646 -6.625 1.00 0.00 N ATOM 340 CA GLY 43 1.378 -13.643 -7.245 1.00 0.00 C ATOM 341 C GLY 43 1.194 -12.394 -8.048 1.00 0.00 C ATOM 342 O GLY 43 0.680 -12.422 -9.164 1.00 0.00 O ATOM 343 N TRP 44 1.602 -11.250 -7.488 1.00 0.00 N ATOM 344 CA TRP 44 1.359 -9.985 -8.110 1.00 0.00 C ATOM 345 CB TRP 44 1.446 -8.843 -7.096 1.00 0.00 C ATOM 346 CG TRP 44 0.533 -9.197 -5.947 1.00 0.00 C ATOM 347 CD2 TRP 44 -0.717 -9.898 -6.102 1.00 0.00 C ATOM 348 CD1 TRP 44 0.749 -9.093 -4.605 1.00 0.00 C ATOM 349 NE1 TRP 44 -0.279 -9.689 -3.915 1.00 0.00 N ATOM 350 CE2 TRP 44 -1.186 -10.191 -4.824 1.00 0.00 C ATOM 351 CE3 TRP 44 -1.412 -10.284 -7.216 1.00 0.00 C ATOM 352 CZ2 TRP 44 -2.355 -10.872 -4.641 1.00 0.00 C ATOM 353 CZ3 TRP 44 -2.594 -10.963 -7.031 1.00 0.00 C ATOM 354 CH2 TRP 44 -3.055 -11.253 -5.765 1.00 0.00 H ATOM 355 C TRP 44 2.232 -9.778 -9.304 1.00 0.00 C ATOM 356 O TRP 44 1.863 -9.046 -10.221 1.00 0.00 O ATOM 357 N GLU 45 3.445 -10.358 -9.286 1.00 0.00 N ATOM 358 CA GLU 45 4.351 -10.277 -10.394 1.00 0.00 C ATOM 359 CB GLU 45 5.682 -10.991 -10.093 1.00 0.00 C ATOM 360 CG GLU 45 6.711 -10.926 -11.223 1.00 0.00 C ATOM 361 CD GLU 45 7.841 -11.892 -10.882 1.00 0.00 C ATOM 362 OE1 GLU 45 8.280 -11.910 -9.701 1.00 0.00 O ATOM 363 OE2 GLU 45 8.273 -12.634 -11.805 1.00 0.00 O ATOM 364 C GLU 45 3.729 -10.995 -11.551 1.00 0.00 C ATOM 365 O GLU 45 3.725 -10.493 -12.673 1.00 0.00 O ATOM 366 N SER 46 3.154 -12.189 -11.301 1.00 0.00 N ATOM 367 CA SER 46 2.595 -12.961 -12.373 1.00 0.00 C ATOM 368 CB SER 46 2.018 -14.317 -11.917 1.00 0.00 C ATOM 369 OG SER 46 0.884 -14.132 -11.083 1.00 0.00 O ATOM 370 C SER 46 1.494 -12.167 -12.996 1.00 0.00 C ATOM 371 O SER 46 1.363 -12.113 -14.217 1.00 0.00 O ATOM 372 N LYS 47 0.678 -11.516 -12.154 1.00 0.00 N ATOM 373 CA LYS 47 -0.427 -10.716 -12.595 1.00 0.00 C ATOM 374 CB LYS 47 -1.343 -10.241 -11.453 1.00 0.00 C ATOM 375 CG LYS 47 -2.714 -10.914 -11.472 1.00 0.00 C ATOM 376 CD LYS 47 -2.698 -12.432 -11.316 1.00 0.00 C ATOM 377 CE LYS 47 -4.006 -13.078 -11.782 1.00 0.00 C ATOM 378 NZ LYS 47 -4.141 -12.946 -13.251 1.00 0.00 N ATOM 379 C LYS 47 0.008 -9.507 -13.360 1.00 0.00 C ATOM 380 O LYS 47 -0.749 -9.028 -14.191 1.00 0.00 O ATOM 381 N LEU 48 1.146 -8.873 -13.038 1.00 0.00 N ATOM 382 CA LEU 48 1.542 -7.749 -13.848 1.00 0.00 C ATOM 383 CB LEU 48 2.504 -6.817 -13.065 1.00 0.00 C ATOM 384 CG LEU 48 3.034 -5.552 -13.776 1.00 0.00 C ATOM 385 CD1 LEU 48 1.947 -4.770 -14.500 1.00 0.00 C ATOM 386 CD2 LEU 48 3.620 -4.588 -12.741 1.00 0.00 C ATOM 387 C LEU 48 2.113 -8.229 -15.162 1.00 0.00 C ATOM 388 O LEU 48 1.785 -7.711 -16.229 1.00 0.00 O ATOM 389 N GLY 49 2.945 -9.289 -15.101 1.00 0.00 N ATOM 390 CA GLY 49 3.692 -9.871 -16.190 1.00 0.00 C ATOM 391 C GLY 49 2.817 -10.480 -17.239 1.00 0.00 C ATOM 392 O GLY 49 3.230 -10.611 -18.387 1.00 0.00 O ATOM 393 N ASN 50 1.644 -10.994 -16.850 1.00 0.00 N ATOM 394 CA ASN 50 0.700 -11.569 -17.765 1.00 0.00 C ATOM 395 CB ASN 50 -0.444 -12.299 -17.045 1.00 0.00 C ATOM 396 CG ASN 50 -1.251 -13.056 -18.091 1.00 0.00 C ATOM 397 OD1 ASN 50 -0.955 -14.210 -18.393 1.00 0.00 O ATOM 398 ND2 ASN 50 -2.295 -12.395 -18.660 1.00 0.00 N ATOM 399 C ASN 50 0.083 -10.458 -18.541 1.00 0.00 C ATOM 400 O ASN 50 -0.490 -10.654 -19.612 1.00 0.00 O ATOM 401 N GLY 51 0.195 -9.242 -17.994 1.00 0.00 N ATOM 402 CA GLY 51 -0.597 -8.160 -18.449 1.00 0.00 C ATOM 403 C GLY 51 -1.709 -8.318 -17.478 1.00 0.00 C ATOM 404 O GLY 51 -1.573 -9.107 -16.550 1.00 0.00 O ATOM 405 N GLU 52 -2.828 -7.613 -17.658 1.00 0.00 N ATOM 406 CA GLU 52 -3.938 -7.643 -16.748 1.00 0.00 C ATOM 407 CB GLU 52 -4.283 -9.026 -16.163 1.00 0.00 C ATOM 408 CG GLU 52 -4.941 -10.015 -17.122 1.00 0.00 C ATOM 409 CD GLU 52 -5.216 -11.283 -16.321 1.00 0.00 C ATOM 410 OE1 GLU 52 -4.232 -11.974 -15.944 1.00 0.00 O ATOM 411 OE2 GLU 52 -6.415 -11.570 -16.064 1.00 0.00 O ATOM 412 C GLU 52 -3.597 -6.803 -15.571 1.00 0.00 C ATOM 413 O GLU 52 -4.458 -6.128 -15.018 1.00 0.00 O ATOM 414 N ILE 53 -2.310 -6.731 -15.215 1.00 0.00 N ATOM 415 CA ILE 53 -1.938 -5.841 -14.171 1.00 0.00 C ATOM 416 CB ILE 53 -1.295 -6.479 -12.971 1.00 0.00 C ATOM 417 CG2 ILE 53 -0.673 -5.355 -12.128 1.00 0.00 C ATOM 418 CG1 ILE 53 -2.361 -7.258 -12.170 1.00 0.00 C ATOM 419 CD1 ILE 53 -3.086 -8.362 -12.940 1.00 0.00 C ATOM 420 C ILE 53 -1.052 -4.881 -14.858 1.00 0.00 C ATOM 421 O ILE 53 -0.378 -5.230 -15.825 1.00 0.00 O ATOM 422 N THR 54 -1.147 -3.616 -14.432 1.00 0.00 N ATOM 423 CA THR 54 -0.391 -2.548 -14.996 1.00 0.00 C ATOM 424 CB THR 54 -1.277 -1.429 -15.450 1.00 0.00 C ATOM 425 OG1 THR 54 -0.509 -0.375 -16.004 1.00 0.00 O ATOM 426 CG2 THR 54 -2.109 -0.935 -14.257 1.00 0.00 C ATOM 427 C THR 54 0.471 -2.050 -13.890 1.00 0.00 C ATOM 428 O THR 54 0.258 -2.404 -12.734 1.00 0.00 O ATOM 429 N VAL 55 1.434 -1.177 -14.228 1.00 0.00 N ATOM 430 CA VAL 55 2.454 -0.720 -13.329 1.00 0.00 C ATOM 431 CB VAL 55 3.070 0.537 -13.855 1.00 0.00 C ATOM 432 CG1 VAL 55 4.385 0.833 -13.115 1.00 0.00 C ATOM 433 CG2 VAL 55 3.060 0.506 -15.385 1.00 0.00 C ATOM 434 C VAL 55 1.761 -0.221 -12.106 1.00 0.00 C ATOM 435 O VAL 55 2.023 -0.658 -10.987 1.00 0.00 O ATOM 436 N LYS 56 0.801 0.687 -12.335 1.00 0.00 N ATOM 437 CA LYS 56 0.112 1.376 -11.292 1.00 0.00 C ATOM 438 CB LYS 56 -0.834 2.449 -11.861 1.00 0.00 C ATOM 439 CG LYS 56 -1.425 3.421 -10.836 1.00 0.00 C ATOM 440 CD LYS 56 -2.326 2.764 -9.791 1.00 0.00 C ATOM 441 CE LYS 56 -3.328 1.774 -10.389 1.00 0.00 C ATOM 442 NZ LYS 56 -4.273 2.491 -11.269 1.00 0.00 N ATOM 443 C LYS 56 -0.698 0.414 -10.482 1.00 0.00 C ATOM 444 O LYS 56 -0.707 0.471 -9.257 1.00 0.00 O ATOM 445 N GLU 57 -1.403 -0.515 -11.133 1.00 0.00 N ATOM 446 CA GLU 57 -2.251 -1.401 -10.395 1.00 0.00 C ATOM 447 CB GLU 57 -3.081 -2.300 -11.327 1.00 0.00 C ATOM 448 CG GLU 57 -4.089 -1.480 -12.138 1.00 0.00 C ATOM 449 CD GLU 57 -4.690 -2.361 -13.218 1.00 0.00 C ATOM 450 OE1 GLU 57 -3.904 -3.001 -13.966 1.00 0.00 O ATOM 451 OE2 GLU 57 -5.944 -2.400 -13.308 1.00 0.00 O ATOM 452 C GLU 57 -1.399 -2.240 -9.499 1.00 0.00 C ATOM 453 O GLU 57 -1.781 -2.576 -8.379 1.00 0.00 O ATOM 454 N PHE 58 -0.206 -2.603 -9.988 1.00 0.00 N ATOM 455 CA PHE 58 0.722 -3.415 -9.262 1.00 0.00 C ATOM 456 CB PHE 58 1.927 -3.765 -10.151 1.00 0.00 C ATOM 457 CG PHE 58 2.760 -4.781 -9.466 1.00 0.00 C ATOM 458 CD1 PHE 58 2.318 -6.075 -9.357 1.00 0.00 C ATOM 459 CD2 PHE 58 3.991 -4.454 -8.959 1.00 0.00 C ATOM 460 CE1 PHE 58 3.091 -7.022 -8.734 1.00 0.00 C ATOM 461 CE2 PHE 58 4.766 -5.399 -8.336 1.00 0.00 C ATOM 462 CZ PHE 58 4.316 -6.689 -8.221 1.00 0.00 C ATOM 463 C PHE 58 1.200 -2.658 -8.046 1.00 0.00 C ATOM 464 O PHE 58 1.319 -3.241 -6.967 1.00 0.00 O ATOM 465 N ILE 59 1.487 -1.339 -8.174 1.00 0.00 N ATOM 466 CA ILE 59 1.958 -0.608 -7.024 1.00 0.00 C ATOM 467 CB ILE 59 2.297 0.870 -7.239 1.00 0.00 C ATOM 468 CG2 ILE 59 1.061 1.686 -7.608 1.00 0.00 C ATOM 469 CG1 ILE 59 2.960 1.499 -5.994 1.00 0.00 C ATOM 470 CD1 ILE 59 2.046 1.786 -4.798 1.00 0.00 C ATOM 471 C ILE 59 0.907 -0.648 -5.971 1.00 0.00 C ATOM 472 O ILE 59 1.209 -0.883 -4.802 1.00 0.00 O ATOM 473 N GLU 60 -0.353 -0.414 -6.365 1.00 0.00 N ATOM 474 CA GLU 60 -1.416 -0.281 -5.421 1.00 0.00 C ATOM 475 CB GLU 60 -2.642 0.415 -6.034 1.00 0.00 C ATOM 476 CG GLU 60 -2.244 1.855 -6.378 1.00 0.00 C ATOM 477 CD GLU 60 -3.416 2.632 -6.943 1.00 0.00 C ATOM 478 OE1 GLU 60 -4.300 2.014 -7.594 1.00 0.00 O ATOM 479 OE2 GLU 60 -3.430 3.874 -6.729 1.00 0.00 O ATOM 480 C GLU 60 -1.764 -1.576 -4.749 1.00 0.00 C ATOM 481 O GLU 60 -2.150 -1.577 -3.582 1.00 0.00 O ATOM 482 N GLY 61 -1.674 -2.713 -5.464 1.00 0.00 N ATOM 483 CA GLY 61 -1.949 -3.989 -4.854 1.00 0.00 C ATOM 484 C GLY 61 -0.926 -4.265 -3.798 1.00 0.00 C ATOM 485 O GLY 61 -1.227 -4.798 -2.731 1.00 0.00 O ATOM 486 N LEU 62 0.336 -3.934 -4.104 1.00 0.00 N ATOM 487 CA LEU 62 1.448 -4.111 -3.219 1.00 0.00 C ATOM 488 CB LEU 62 2.707 -3.641 -3.959 1.00 0.00 C ATOM 489 CG LEU 62 3.978 -3.515 -3.125 1.00 0.00 C ATOM 490 CD1 LEU 62 4.358 -4.846 -2.462 1.00 0.00 C ATOM 491 CD2 LEU 62 5.091 -2.920 -4.005 1.00 0.00 C ATOM 492 C LEU 62 1.247 -3.273 -1.990 1.00 0.00 C ATOM 493 O LEU 62 1.357 -3.765 -0.867 1.00 0.00 O ATOM 494 N GLY 63 0.891 -1.989 -2.174 1.00 0.00 N ATOM 495 CA GLY 63 0.756 -1.084 -1.068 1.00 0.00 C ATOM 496 C GLY 63 -0.335 -1.554 -0.156 1.00 0.00 C ATOM 497 O GLY 63 -0.190 -1.501 1.064 1.00 0.00 O ATOM 498 N TYR 64 -1.472 -2.017 -0.715 1.00 0.00 N ATOM 499 CA TYR 64 -2.532 -2.473 0.141 1.00 0.00 C ATOM 500 CB TYR 64 -3.860 -2.849 -0.543 1.00 0.00 C ATOM 501 CG TYR 64 -4.664 -1.605 -0.674 1.00 0.00 C ATOM 502 CD1 TYR 64 -5.325 -1.117 0.430 1.00 0.00 C ATOM 503 CD2 TYR 64 -4.747 -0.921 -1.863 1.00 0.00 C ATOM 504 CE1 TYR 64 -6.072 0.032 0.355 1.00 0.00 C ATOM 505 CE2 TYR 64 -5.495 0.230 -1.944 1.00 0.00 C ATOM 506 CZ TYR 64 -6.159 0.708 -0.837 1.00 0.00 C ATOM 507 OH TYR 64 -6.923 1.890 -0.924 1.00 0.00 H ATOM 508 C TYR 64 -2.089 -3.660 0.931 1.00 0.00 C ATOM 509 O TYR 64 -2.379 -3.743 2.121 1.00 0.00 O ATOM 510 N SER 65 -1.365 -4.607 0.306 1.00 0.00 N ATOM 511 CA SER 65 -0.981 -5.793 1.017 1.00 0.00 C ATOM 512 CB SER 65 -0.089 -6.746 0.199 1.00 0.00 C ATOM 513 OG SER 65 1.203 -6.184 0.011 1.00 0.00 O ATOM 514 C SER 65 -0.204 -5.408 2.235 1.00 0.00 C ATOM 515 O SER 65 -0.480 -5.858 3.345 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 498 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 51.96 79.8 124 100.0 124 ARMSMC SECONDARY STRUCTURE . . 11.64 98.8 82 100.0 82 ARMSMC SURFACE . . . . . . . . 55.62 76.7 90 100.0 90 ARMSMC BURIED . . . . . . . . 40.73 88.2 34 100.0 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.72 46.0 50 100.0 50 ARMSSC1 RELIABLE SIDE CHAINS . 81.50 46.8 47 100.0 47 ARMSSC1 SECONDARY STRUCTURE . . 69.25 59.4 32 100.0 32 ARMSSC1 SURFACE . . . . . . . . 79.84 46.2 39 100.0 39 ARMSSC1 BURIED . . . . . . . . 88.05 45.5 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.69 36.6 41 100.0 41 ARMSSC2 RELIABLE SIDE CHAINS . 81.96 38.9 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 76.55 44.4 27 100.0 27 ARMSSC2 SURFACE . . . . . . . . 86.81 33.3 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 70.23 45.5 11 100.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.23 29.4 17 100.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 73.98 33.3 15 100.0 15 ARMSSC3 SECONDARY STRUCTURE . . 94.85 18.2 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 83.35 31.2 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 31.87 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 111.41 33.3 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 111.41 33.3 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 71.61 60.0 5 100.0 5 ARMSSC4 SURFACE . . . . . . . . 111.41 33.3 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.85 (Number of atoms: 63) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.85 63 100.0 63 CRMSCA CRN = ALL/NP . . . . . 0.0610 CRMSCA SECONDARY STRUCTURE . . 3.25 41 100.0 41 CRMSCA SURFACE . . . . . . . . 4.05 46 100.0 46 CRMSCA BURIED . . . . . . . . 3.24 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.88 309 100.0 309 CRMSMC SECONDARY STRUCTURE . . 3.28 201 100.0 201 CRMSMC SURFACE . . . . . . . . 4.08 226 100.0 226 CRMSMC BURIED . . . . . . . . 3.30 83 100.0 83 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.75 246 32.8 750 CRMSSC RELIABLE SIDE CHAINS . 5.76 226 31.0 730 CRMSSC SECONDARY STRUCTURE . . 4.15 158 32.6 484 CRMSSC SURFACE . . . . . . . . 6.06 184 33.2 554 CRMSSC BURIED . . . . . . . . 4.70 62 31.6 196 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.86 498 49.7 1002 CRMSALL SECONDARY STRUCTURE . . 3.73 322 49.7 648 CRMSALL SURFACE . . . . . . . . 5.12 368 49.9 738 CRMSALL BURIED . . . . . . . . 4.02 130 49.2 264 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.563 1.000 0.500 63 100.0 63 ERRCA SECONDARY STRUCTURE . . 3.036 1.000 0.500 41 100.0 41 ERRCA SURFACE . . . . . . . . 3.810 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 2.895 1.000 0.500 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.577 1.000 0.500 309 100.0 309 ERRMC SECONDARY STRUCTURE . . 3.060 1.000 0.500 201 100.0 201 ERRMC SURFACE . . . . . . . . 3.809 1.000 0.500 226 100.0 226 ERRMC BURIED . . . . . . . . 2.945 1.000 0.500 83 100.0 83 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.982 1.000 0.500 246 32.8 750 ERRSC RELIABLE SIDE CHAINS . 4.972 1.000 0.500 226 31.0 730 ERRSC SECONDARY STRUCTURE . . 3.774 1.000 0.500 158 32.6 484 ERRSC SURFACE . . . . . . . . 5.309 1.000 0.500 184 33.2 554 ERRSC BURIED . . . . . . . . 4.012 1.000 0.500 62 31.6 196 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.240 1.000 0.500 498 49.7 1002 ERRALL SECONDARY STRUCTURE . . 3.408 1.000 0.500 322 49.7 648 ERRALL SURFACE . . . . . . . . 4.521 1.000 0.500 368 49.9 738 ERRALL BURIED . . . . . . . . 3.446 1.000 0.500 130 49.2 264 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 2 9 22 52 63 63 63 DISTCA CA (P) 3.17 14.29 34.92 82.54 100.00 63 DISTCA CA (RMS) 0.83 1.56 2.11 3.24 3.85 DISTCA ALL (N) 6 63 155 357 482 498 1002 DISTALL ALL (P) 0.60 6.29 15.47 35.63 48.10 1002 DISTALL ALL (RMS) 0.78 1.56 2.16 3.24 4.40 DISTALL END of the results output