####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 63 ( 309), selected 63 , name T0553TS373_1-D1 # Molecule2: number of CA atoms 63 ( 1002), selected 63 , name T0553-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0553TS373_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 18 - 49 4.99 13.46 LCS_AVERAGE: 44.97 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 9 - 27 1.64 18.70 LCS_AVERAGE: 15.60 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 12 - 25 0.99 18.67 LONGEST_CONTINUOUS_SEGMENT: 14 13 - 26 0.97 18.88 LONGEST_CONTINUOUS_SEGMENT: 14 14 - 27 0.96 18.74 LCS_AVERAGE: 10.15 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 63 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 3 V 3 3 3 22 0 3 4 4 4 5 5 10 14 15 15 15 18 22 27 32 34 36 38 42 LCS_GDT F 4 F 4 3 3 28 1 3 4 4 4 5 8 10 14 15 15 15 15 18 20 26 32 35 38 42 LCS_GDT K 5 K 5 3 3 28 1 3 4 4 4 5 8 10 14 15 15 15 17 18 20 21 27 30 38 39 LCS_GDT R 6 R 6 3 3 28 1 3 3 3 4 5 8 12 14 15 17 23 24 26 26 26 32 33 38 39 LCS_GDT V 7 V 7 4 5 28 3 4 4 6 11 16 20 21 22 23 24 25 26 31 32 35 37 39 40 43 LCS_GDT A 8 A 8 4 10 28 3 4 4 5 8 13 20 21 22 23 24 25 26 30 32 35 37 39 40 43 LCS_GDT G 9 G 9 4 19 28 3 5 10 16 18 19 20 21 22 23 24 25 27 31 32 35 37 39 40 43 LCS_GDT I 10 I 10 6 19 28 3 5 10 16 18 19 20 21 22 23 24 25 27 31 32 35 37 39 40 43 LCS_GDT K 11 K 11 7 19 28 3 7 12 16 18 19 20 21 22 23 24 25 26 29 31 32 35 39 40 43 LCS_GDT D 12 D 12 14 19 29 3 10 14 16 18 19 20 21 22 23 24 25 28 31 33 35 37 39 40 43 LCS_GDT K 13 K 13 14 19 29 3 10 14 16 18 19 20 21 22 23 24 24 26 29 31 32 33 36 37 40 LCS_GDT A 14 A 14 14 19 29 5 10 14 16 18 19 20 21 22 23 24 24 26 31 33 35 37 38 40 41 LCS_GDT A 15 A 15 14 19 29 3 7 14 16 18 19 20 21 22 23 24 26 29 31 33 35 37 39 40 43 LCS_GDT I 16 I 16 14 19 29 3 10 14 16 18 19 20 21 22 23 24 25 28 31 33 35 37 39 40 43 LCS_GDT K 17 K 17 14 19 29 9 10 14 16 18 19 20 21 22 23 24 25 26 29 33 34 37 38 40 43 LCS_GDT T 18 T 18 14 19 32 9 10 14 16 18 19 20 21 22 23 24 26 29 31 33 35 37 39 40 43 LCS_GDT L 19 L 19 14 19 32 9 10 14 16 18 19 20 21 22 23 24 26 29 31 33 35 37 39 40 43 LCS_GDT I 20 I 20 14 19 32 9 10 14 16 18 19 20 21 22 23 24 25 28 31 33 35 37 39 40 43 LCS_GDT S 21 S 21 14 19 32 9 10 14 16 18 19 20 21 22 23 24 25 28 31 33 35 37 39 40 43 LCS_GDT A 22 A 22 14 19 32 9 10 14 16 18 19 20 21 22 23 24 26 29 31 33 35 37 39 40 43 LCS_GDT A 23 A 23 14 19 32 9 10 14 16 18 19 20 21 22 23 24 26 29 31 33 35 37 39 40 43 LCS_GDT Y 24 Y 24 14 19 32 9 10 14 16 18 19 20 21 22 23 24 25 29 31 33 35 37 39 40 43 LCS_GDT R 25 R 25 14 19 32 9 10 13 16 18 19 19 21 21 22 24 26 29 31 33 35 37 39 40 43 LCS_GDT Q 26 Q 26 14 19 32 3 4 13 16 18 19 19 20 21 22 24 26 29 31 33 35 37 39 40 43 LCS_GDT I 27 I 27 14 19 32 3 10 14 16 18 19 20 21 22 23 24 24 27 31 33 35 37 39 40 43 LCS_GDT F 28 F 28 4 17 32 3 4 4 4 13 15 18 21 22 23 24 24 29 31 33 35 37 39 40 43 LCS_GDT E 29 E 29 4 5 32 3 4 4 13 18 19 20 21 22 23 24 26 29 31 33 35 37 39 40 43 LCS_GDT R 30 R 30 4 5 32 3 4 5 7 10 13 20 21 22 23 24 26 29 31 33 35 37 39 40 43 LCS_GDT D 31 D 31 4 5 32 3 4 4 5 5 13 14 19 22 23 23 26 29 31 33 35 37 39 40 43 LCS_GDT I 32 I 32 4 5 32 3 4 6 7 9 13 15 16 18 22 23 26 29 31 33 35 37 39 40 43 LCS_GDT A 33 A 33 4 6 32 4 5 6 7 10 13 15 16 18 22 23 26 29 31 33 35 37 39 40 43 LCS_GDT P 34 P 34 4 6 32 4 5 6 8 10 13 15 16 18 22 23 26 29 31 33 35 37 39 40 43 LCS_GDT Y 35 Y 35 4 6 32 4 5 6 7 7 10 12 15 17 22 23 26 29 31 33 35 37 39 40 43 LCS_GDT I 36 I 36 4 6 32 4 5 6 6 7 7 9 11 17 20 23 25 29 31 33 35 37 39 40 43 LCS_GDT A 37 A 37 4 6 32 3 5 6 7 10 13 15 16 18 22 23 26 29 31 33 35 37 39 40 43 LCS_GDT Q 38 Q 38 4 6 32 3 5 6 8 10 13 15 16 18 22 23 26 29 31 33 35 37 39 40 43 LCS_GDT N 39 N 39 4 6 32 3 5 6 8 10 13 15 16 18 22 23 26 29 31 33 35 37 39 40 43 LCS_GDT E 40 E 40 4 6 32 3 5 6 8 10 13 14 16 18 22 23 26 29 31 33 35 37 39 40 43 LCS_GDT F 41 F 41 3 6 32 3 3 4 5 6 10 11 12 15 21 23 26 29 31 32 35 37 39 40 43 LCS_GDT S 42 S 42 3 6 32 3 3 4 5 5 6 10 12 14 17 20 23 27 31 32 33 36 38 40 43 LCS_GDT G 43 G 43 3 6 32 3 3 3 6 8 11 15 16 18 21 23 26 29 31 33 35 37 39 40 43 LCS_GDT W 44 W 44 3 6 32 2 3 5 7 8 11 15 16 18 21 23 26 29 31 33 35 37 39 40 43 LCS_GDT E 45 E 45 3 5 32 3 3 4 5 8 10 11 13 16 21 23 26 29 31 32 35 37 39 40 43 LCS_GDT S 46 S 46 3 5 32 3 3 4 6 8 11 15 16 18 21 23 26 29 31 33 35 37 39 40 43 LCS_GDT K 47 K 47 3 5 32 3 3 5 7 8 11 15 16 18 21 23 26 29 31 33 35 37 39 40 43 LCS_GDT L 48 L 48 3 7 32 3 3 4 7 8 11 15 16 18 21 23 26 29 31 33 35 37 39 40 43 LCS_GDT G 49 G 49 3 7 32 3 3 4 6 8 10 12 14 17 21 23 26 29 31 32 35 37 38 40 41 LCS_GDT N 50 N 50 4 7 29 3 3 4 6 8 10 11 12 14 17 17 18 20 23 26 33 35 38 40 40 LCS_GDT G 51 G 51 4 7 23 3 3 4 5 6 9 10 12 14 16 17 18 20 23 23 24 34 36 40 41 LCS_GDT E 52 E 52 4 7 22 3 3 4 6 8 9 11 12 14 17 17 18 22 24 32 35 37 39 40 43 LCS_GDT I 53 I 53 4 7 22 3 3 4 6 8 10 11 12 14 17 17 18 27 31 32 35 37 39 40 43 LCS_GDT T 54 T 54 4 7 22 3 3 4 6 8 10 11 13 16 19 21 25 27 31 32 35 37 39 40 43 LCS_GDT V 55 V 55 4 4 22 3 4 4 6 7 9 13 17 18 20 21 23 26 27 30 33 37 39 40 43 LCS_GDT K 56 K 56 4 4 22 3 4 4 5 6 10 12 17 18 20 21 23 24 26 27 28 29 30 32 33 LCS_GDT E 57 E 57 4 6 22 3 4 5 6 7 10 13 17 18 20 21 23 24 26 27 28 29 30 31 34 LCS_GDT F 58 F 58 4 6 22 3 4 5 6 7 8 13 17 18 20 21 23 24 26 27 29 33 36 39 43 LCS_GDT I 59 I 59 4 6 22 3 3 5 6 7 9 13 17 18 20 21 23 24 26 27 28 32 35 38 42 LCS_GDT E 60 E 60 4 6 22 3 3 5 6 7 9 13 17 18 19 21 23 24 26 27 28 29 30 30 32 LCS_GDT G 61 G 61 3 6 19 3 4 4 6 7 9 12 17 18 19 21 23 24 26 27 28 29 30 30 32 LCS_GDT L 62 L 62 4 6 18 3 5 6 6 7 8 10 13 14 18 20 22 23 25 25 27 27 28 30 32 LCS_GDT G 63 G 63 4 6 18 3 4 5 6 7 8 9 11 13 16 16 18 19 23 23 25 27 28 30 31 LCS_GDT Y 64 Y 64 4 4 18 3 3 5 5 6 8 10 13 14 17 18 22 22 25 25 25 27 28 30 31 LCS_GDT S 65 S 65 4 4 18 0 3 5 6 7 9 12 14 16 18 20 23 23 25 25 27 27 28 30 31 LCS_AVERAGE LCS_A: 23.57 ( 10.15 15.60 44.97 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 10 14 16 18 19 20 21 22 23 24 26 29 31 33 35 37 39 40 43 GDT PERCENT_AT 14.29 15.87 22.22 25.40 28.57 30.16 31.75 33.33 34.92 36.51 38.10 41.27 46.03 49.21 52.38 55.56 58.73 61.90 63.49 68.25 GDT RMS_LOCAL 0.32 0.43 0.97 1.15 1.51 1.64 2.29 2.40 2.65 2.92 2.98 4.03 4.47 4.69 5.13 5.31 5.56 5.91 5.95 6.46 GDT RMS_ALL_AT 18.52 18.54 18.51 18.68 18.76 18.70 18.02 18.22 17.67 17.39 17.97 13.75 13.57 13.70 12.80 13.11 13.01 11.29 13.20 11.41 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 3 V 3 16.644 2 0.556 0.559 19.039 0.000 0.000 LGA F 4 F 4 15.354 6 0.602 0.544 16.603 0.000 0.000 LGA K 5 K 5 14.024 4 0.619 0.572 15.194 0.000 0.000 LGA R 6 R 6 8.088 6 0.585 0.553 9.966 10.952 4.632 LGA V 7 V 7 4.521 2 0.631 0.571 6.510 37.738 23.469 LGA A 8 A 8 4.762 0 0.510 0.466 5.672 33.095 30.762 LGA G 9 G 9 2.132 0 0.067 0.067 3.183 63.095 63.095 LGA I 10 I 10 1.271 3 0.391 0.370 1.829 85.952 52.083 LGA K 11 K 11 0.987 4 0.082 0.090 1.562 83.690 45.291 LGA D 12 D 12 1.296 3 0.621 0.556 2.298 77.262 48.810 LGA K 13 K 13 2.154 4 0.195 0.185 2.700 70.952 37.884 LGA A 14 A 14 1.874 0 0.158 0.149 2.394 70.833 69.619 LGA A 15 A 15 1.541 0 0.654 0.629 2.610 68.929 69.714 LGA I 16 I 16 3.134 3 0.046 0.062 4.053 59.167 34.226 LGA K 17 K 17 2.137 4 0.057 0.076 3.045 73.095 38.042 LGA T 18 T 18 1.292 2 0.073 0.096 1.955 81.548 57.007 LGA L 19 L 19 2.224 3 0.085 0.087 3.085 70.952 41.726 LGA I 20 I 20 1.537 3 0.089 0.115 2.503 83.810 49.048 LGA S 21 S 21 1.389 1 0.137 0.146 2.283 77.381 62.381 LGA A 22 A 22 2.248 0 0.084 0.097 2.571 68.929 66.571 LGA A 23 A 23 1.882 0 0.044 0.067 2.226 77.143 74.667 LGA Y 24 Y 24 0.904 7 0.253 0.252 3.127 76.310 30.833 LGA R 25 R 25 3.681 6 0.171 0.186 5.866 41.667 19.697 LGA Q 26 Q 26 4.734 4 0.582 0.591 6.858 45.476 21.693 LGA I 27 I 27 1.806 3 0.561 0.592 2.508 68.929 43.571 LGA F 28 F 28 6.607 6 0.232 0.255 8.690 22.024 8.268 LGA E 29 E 29 2.602 4 0.601 0.607 3.424 53.571 32.857 LGA R 30 R 30 6.146 6 0.408 0.481 9.403 14.286 7.143 LGA D 31 D 31 8.840 3 0.149 0.211 10.817 3.214 2.500 LGA I 32 I 32 14.375 3 0.137 0.210 17.609 0.000 0.000 LGA A 33 A 33 19.591 0 0.256 0.281 21.708 0.000 0.000 LGA P 34 P 34 21.728 2 0.099 0.098 23.188 0.000 0.000 LGA Y 35 Y 35 23.101 7 0.030 0.031 23.588 0.000 0.000 LGA I 36 I 36 19.539 3 0.483 0.453 20.621 0.000 0.000 LGA A 37 A 37 19.032 0 0.299 0.312 22.296 0.000 0.000 LGA Q 38 Q 38 25.080 4 0.061 0.105 29.779 0.000 0.000 LGA N 39 N 39 29.803 3 0.613 0.587 29.947 0.000 0.000 LGA E 40 E 40 29.379 4 0.587 0.592 33.041 0.000 0.000 LGA F 41 F 41 31.510 6 0.510 0.556 32.073 0.000 0.000 LGA S 42 S 42 32.005 1 0.262 0.264 32.676 0.000 0.000 LGA G 43 G 43 31.915 0 0.490 0.490 33.735 0.000 0.000 LGA W 44 W 44 30.223 9 0.680 0.640 30.227 0.000 0.000 LGA E 45 E 45 28.602 4 0.610 0.585 29.347 0.000 0.000 LGA S 46 S 46 29.828 1 0.333 0.325 32.352 0.000 0.000 LGA K 47 K 47 31.063 4 0.683 0.639 32.807 0.000 0.000 LGA L 48 L 48 25.041 3 0.606 0.592 27.112 0.000 0.000 LGA G 49 G 49 23.967 0 0.316 0.316 24.027 0.000 0.000 LGA N 50 N 50 25.544 3 0.610 0.583 26.784 0.000 0.000 LGA G 51 G 51 24.299 0 0.316 0.316 27.048 0.000 0.000 LGA E 52 E 52 26.972 4 0.658 0.598 27.891 0.000 0.000 LGA I 53 I 53 22.849 3 0.158 0.208 24.110 0.000 0.000 LGA T 54 T 54 21.470 2 0.620 0.568 21.824 0.000 0.000 LGA V 55 V 55 16.840 2 0.613 0.587 18.526 0.000 0.000 LGA K 56 K 56 21.877 4 0.117 0.130 23.145 0.000 0.000 LGA E 57 E 57 21.510 4 0.679 0.647 21.805 0.000 0.000 LGA F 58 F 58 16.541 6 0.587 0.592 18.295 0.000 0.000 LGA I 59 I 59 11.628 3 0.328 0.336 13.502 0.000 0.060 LGA E 60 E 60 17.664 4 0.620 0.606 20.829 0.000 0.000 LGA G 61 G 61 21.107 0 0.273 0.273 22.738 0.000 0.000 LGA L 62 L 62 18.091 3 0.290 0.273 20.651 0.000 0.000 LGA G 63 G 63 22.916 0 0.231 0.231 25.584 0.000 0.000 LGA Y 64 Y 64 23.386 7 0.649 0.597 23.744 0.000 0.000 LGA S 65 S 65 23.189 1 0.578 0.522 23.189 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 63 252 252 100.00 498 309 62.05 63 SUMMARY(RMSD_GDC): 10.745 10.690 10.737 24.127 16.439 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 63 63 4.0 21 2.40 32.540 28.551 0.841 LGA_LOCAL RMSD: 2.398 Number of atoms: 21 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.215 Number of assigned atoms: 63 Std_ASGN_ATOMS RMSD: 10.745 Standard rmsd on all 63 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.786923 * X + -0.384774 * Y + -0.482392 * Z + 51.635654 Y_new = 0.557516 * X + 0.108323 * Y + 0.823069 * Z + 61.756485 Z_new = -0.264441 * X + -0.916632 * Y + 0.299759 * Z + 49.468571 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.616392 0.267625 -1.254736 [DEG: 35.3166 15.3338 -71.8911 ] ZXZ: -2.611465 1.266356 -2.860727 [DEG: -149.6259 72.5568 -163.9076 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0553TS373_1-D1 REMARK 2: T0553-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0553TS373_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 63 63 4.0 21 2.40 28.551 10.74 REMARK ---------------------------------------------------------- MOLECULE T0553TS373_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0553 REMARK MODEL 1 REMARK PARENT N/A ATOM 10 N VAL 3 3.133 3.775 -22.368 1.00 0.00 N ATOM 11 CA VAL 3 3.459 3.655 -20.940 1.00 0.00 C ATOM 12 C VAL 3 3.653 2.166 -20.646 1.00 0.00 C ATOM 13 O VAL 3 4.718 1.720 -20.192 1.00 0.00 O ATOM 14 CB VAL 3 2.357 4.118 -19.969 1.00 0.00 C ATOM 15 N PHE 4 2.597 1.422 -20.918 1.00 0.00 N ATOM 16 CA PHE 4 2.568 -0.033 -20.711 1.00 0.00 C ATOM 17 C PHE 4 3.333 -0.805 -21.787 1.00 0.00 C ATOM 18 O PHE 4 3.774 -1.945 -21.587 1.00 0.00 O ATOM 19 CB PHE 4 1.151 -0.508 -20.339 1.00 0.00 C ATOM 20 N LYS 5 3.474 -0.150 -22.923 1.00 0.00 N ATOM 21 CA LYS 5 4.177 -0.706 -24.088 1.00 0.00 C ATOM 22 C LYS 5 5.616 -0.276 -23.799 1.00 0.00 C ATOM 23 O LYS 5 6.593 -0.909 -24.231 1.00 0.00 O ATOM 24 CB LYS 5 3.404 -0.094 -25.272 1.00 0.00 C ATOM 25 N ARG 6 5.711 0.814 -23.059 1.00 0.00 N ATOM 26 CA ARG 6 7.000 1.402 -22.663 1.00 0.00 C ATOM 27 C ARG 6 7.592 0.386 -21.684 1.00 0.00 C ATOM 28 O ARG 6 8.797 0.092 -21.691 1.00 0.00 O ATOM 29 CB ARG 6 6.682 2.735 -21.962 1.00 0.00 C ATOM 30 N VAL 7 6.711 -0.135 -20.851 1.00 0.00 N ATOM 31 CA VAL 7 7.066 -1.130 -19.830 1.00 0.00 C ATOM 32 C VAL 7 7.710 -2.329 -20.528 1.00 0.00 C ATOM 33 O VAL 7 8.117 -3.316 -19.900 1.00 0.00 O ATOM 34 CB VAL 7 5.750 -1.391 -19.072 1.00 0.00 C ATOM 35 N ALA 8 7.786 -2.209 -21.841 1.00 0.00 N ATOM 36 CA ALA 8 8.368 -3.243 -22.707 1.00 0.00 C ATOM 37 C ALA 8 9.795 -3.480 -22.206 1.00 0.00 C ATOM 38 O ALA 8 10.361 -4.577 -22.330 1.00 0.00 O ATOM 39 CB ALA 8 8.394 -2.772 -24.173 1.00 0.00 C ATOM 40 N GLY 9 10.347 -2.423 -21.642 1.00 0.00 N ATOM 41 CA GLY 9 11.712 -2.431 -21.092 1.00 0.00 C ATOM 42 C GLY 9 11.586 -2.922 -19.649 1.00 0.00 C ATOM 43 O GLY 9 12.555 -3.376 -19.022 1.00 0.00 O ATOM 44 N ILE 10 10.368 -2.816 -19.150 1.00 0.00 N ATOM 45 CA ILE 10 10.025 -3.229 -17.782 1.00 0.00 C ATOM 46 C ILE 10 9.434 -4.613 -18.058 1.00 0.00 C ATOM 47 O ILE 10 8.863 -5.272 -17.178 1.00 0.00 O ATOM 48 CB ILE 10 9.021 -2.180 -17.267 1.00 0.00 C ATOM 49 N LYS 11 9.591 -5.026 -19.302 1.00 0.00 N ATOM 50 CA LYS 11 9.100 -6.325 -19.783 1.00 0.00 C ATOM 51 C LYS 11 9.993 -7.414 -19.183 1.00 0.00 C ATOM 52 O LYS 11 9.674 -8.611 -19.206 1.00 0.00 O ATOM 53 CB LYS 11 9.335 -6.305 -21.305 1.00 0.00 C ATOM 54 N ASP 12 11.111 -6.959 -18.652 1.00 0.00 N ATOM 55 CA ASP 12 12.112 -7.833 -18.022 1.00 0.00 C ATOM 56 C ASP 12 11.601 -8.618 -16.812 1.00 0.00 C ATOM 57 O ASP 12 12.190 -9.621 -16.382 1.00 0.00 O ATOM 58 CB ASP 12 13.374 -7.021 -17.681 1.00 0.00 C ATOM 59 N LYS 13 10.494 -8.129 -16.284 1.00 0.00 N ATOM 60 CA LYS 13 9.832 -8.727 -15.116 1.00 0.00 C ATOM 61 C LYS 13 10.912 -9.073 -14.088 1.00 0.00 C ATOM 62 O LYS 13 10.676 -9.788 -13.103 1.00 0.00 O ATOM 63 CB LYS 13 8.914 -9.887 -15.544 1.00 0.00 C ATOM 64 N ALA 14 12.091 -8.542 -14.349 1.00 0.00 N ATOM 65 CA ALA 14 13.268 -8.746 -13.492 1.00 0.00 C ATOM 66 C ALA 14 13.454 -7.379 -12.830 1.00 0.00 C ATOM 67 O ALA 14 14.116 -7.237 -11.790 1.00 0.00 O ATOM 68 CB ALA 14 14.354 -8.969 -14.561 1.00 0.00 C ATOM 69 N ALA 15 12.852 -6.390 -13.463 1.00 0.00 N ATOM 70 CA ALA 15 12.900 -4.995 -12.999 1.00 0.00 C ATOM 71 C ALA 15 11.442 -4.659 -12.682 1.00 0.00 C ATOM 72 O ALA 15 10.503 -5.106 -13.357 1.00 0.00 O ATOM 73 CB ALA 15 13.297 -4.072 -14.166 1.00 0.00 C ATOM 74 N ILE 16 11.290 -3.862 -11.640 1.00 0.00 N ATOM 75 CA ILE 16 9.975 -3.413 -11.162 1.00 0.00 C ATOM 76 C ILE 16 9.442 -4.445 -10.165 1.00 0.00 C ATOM 77 O ILE 16 8.910 -4.112 -9.096 1.00 0.00 O ATOM 78 CB ILE 16 8.928 -3.245 -12.280 1.00 0.00 C ATOM 79 N LYS 17 9.604 -5.696 -10.550 1.00 0.00 N ATOM 80 CA LYS 17 9.166 -6.846 -9.745 1.00 0.00 C ATOM 81 C LYS 17 10.042 -7.102 -8.517 1.00 0.00 C ATOM 82 O LYS 17 9.558 -7.416 -7.420 1.00 0.00 O ATOM 83 CB LYS 17 9.156 -8.064 -10.686 1.00 0.00 C ATOM 84 N THR 18 11.334 -6.957 -8.741 1.00 0.00 N ATOM 85 CA THR 18 12.354 -7.157 -7.701 1.00 0.00 C ATOM 86 C THR 18 12.494 -5.892 -6.850 1.00 0.00 C ATOM 87 O THR 18 12.905 -5.930 -5.682 1.00 0.00 O ATOM 88 CB THR 18 13.752 -7.510 -8.241 1.00 0.00 C ATOM 89 N LEU 19 12.140 -4.784 -7.472 1.00 0.00 N ATOM 90 CA LEU 19 12.196 -3.458 -6.841 1.00 0.00 C ATOM 91 C LEU 19 10.896 -3.160 -6.089 1.00 0.00 C ATOM 92 O LEU 19 10.851 -2.350 -5.149 1.00 0.00 O ATOM 93 CB LEU 19 12.433 -2.495 -8.019 1.00 0.00 C ATOM 94 N ILE 20 9.853 -3.837 -6.532 1.00 0.00 N ATOM 95 CA ILE 20 8.509 -3.704 -5.952 1.00 0.00 C ATOM 96 C ILE 20 8.640 -4.556 -4.688 1.00 0.00 C ATOM 97 O ILE 20 8.085 -4.243 -3.624 1.00 0.00 O ATOM 98 CB ILE 20 7.572 -4.144 -7.093 1.00 0.00 C ATOM 99 N SER 21 9.387 -5.633 -4.843 1.00 0.00 N ATOM 100 CA SER 21 9.645 -6.590 -3.757 1.00 0.00 1 ATOM 101 C SER 21 10.533 -5.943 -2.692 1.00 0.00 1 ATOM 102 O SER 21 10.714 -6.463 -1.586 1.00 0.00 1 ATOM 103 CB SER 21 10.328 -7.875 -4.260 1.00 0.00 1 ATOM 104 N ALA 22 11.073 -4.799 -3.063 1.00 0.00 1 ATOM 105 CA ALA 22 11.959 -4.011 -2.194 1.00 0.00 1 ATOM 106 C ALA 22 11.114 -2.909 -1.549 1.00 0.00 1 ATOM 107 O ALA 22 11.383 -2.441 -0.429 1.00 0.00 1 ATOM 108 CB ALA 22 12.870 -3.250 -3.175 1.00 0.00 1 ATOM 109 N ALA 23 10.093 -2.516 -2.290 1.00 0.00 1 ATOM 110 CA ALA 23 9.153 -1.469 -1.862 1.00 0.00 1 ATOM 111 C ALA 23 8.136 -2.112 -0.919 1.00 0.00 1 ATOM 112 O ALA 23 7.560 -1.465 -0.037 1.00 0.00 1 ATOM 113 CB ALA 23 8.309 -0.882 -3.008 1.00 0.00 1 ATOM 114 N TYR 24 7.940 -3.400 -1.135 1.00 0.00 1 ATOM 115 CA TYR 24 7.005 -4.213 -0.345 1.00 0.00 1 ATOM 116 C TYR 24 7.466 -4.862 0.963 1.00 0.00 1 ATOM 117 O TYR 24 6.687 -5.490 1.693 1.00 0.00 1 ATOM 118 CB TYR 24 6.746 -5.377 -1.318 1.00 0.00 1 ATOM 119 N ARG 25 8.745 -4.688 1.227 1.00 0.00 1 ATOM 120 CA ARG 25 9.395 -5.227 2.432 1.00 0.00 1 ATOM 121 C ARG 25 8.931 -4.356 3.601 1.00 0.00 1 ATOM 122 O ARG 25 8.591 -4.844 4.692 1.00 0.00 1 ATOM 123 CB ARG 25 10.883 -4.846 2.323 1.00 0.00 1 ATOM 124 N GLN 26 8.927 -3.062 3.339 1.00 0.00 1 ATOM 125 CA GLN 26 8.518 -2.047 4.320 1.00 0.00 1 ATOM 126 C GLN 26 8.273 -0.809 3.457 1.00 0.00 1 ATOM 127 O GLN 26 9.189 -0.035 3.143 1.00 0.00 1 ATOM 128 CB GLN 26 9.829 -1.828 5.098 1.00 0.00 1 ATOM 129 N ILE 27 7.014 -0.651 3.089 1.00 0.00 1 ATOM 130 CA ILE 27 6.559 0.473 2.258 1.00 0.00 1 ATOM 131 C ILE 27 6.177 1.553 3.271 1.00 0.00 1 ATOM 132 O ILE 27 5.103 1.521 3.892 1.00 0.00 1 ATOM 133 CB ILE 27 5.348 -0.013 1.440 1.00 0.00 1 ATOM 134 N PHE 28 7.086 2.500 3.414 1.00 0.00 1 ATOM 135 CA PHE 28 6.921 3.633 4.335 1.00 0.00 1 ATOM 136 C PHE 28 6.970 3.005 5.729 1.00 0.00 1 ATOM 137 O PHE 28 6.386 3.512 6.699 1.00 0.00 1 ATOM 138 CB PHE 28 5.604 4.429 4.333 1.00 0.00 1 ATOM 139 N GLU 29 7.679 1.893 5.792 1.00 0.00 1 ATOM 140 CA GLU 29 7.856 1.126 7.034 1.00 0.00 1 ATOM 141 C GLU 29 9.355 0.922 7.261 1.00 0.00 1 ATOM 142 O GLU 29 10.109 0.520 6.363 1.00 0.00 1 ATOM 143 CB GLU 29 7.223 -0.276 6.980 1.00 0.00 1 ATOM 144 N ARG 30 9.755 1.211 8.486 1.00 0.00 1 ATOM 145 CA ARG 30 11.155 1.086 8.921 1.00 0.00 1 ATOM 146 C ARG 30 11.852 2.099 8.012 1.00 0.00 1 ATOM 147 O ARG 30 11.926 3.300 8.303 1.00 0.00 1 ATOM 148 CB ARG 30 11.498 -0.364 8.534 1.00 0.00 1 ATOM 149 N ASP 31 12.357 1.576 6.910 1.00 0.00 1 ATOM 150 CA ASP 31 13.068 2.369 5.898 1.00 0.00 1 ATOM 151 C ASP 31 12.183 3.033 4.841 1.00 0.00 1 ATOM 152 O ASP 31 11.869 2.456 3.792 1.00 0.00 1 ATOM 153 CB ASP 31 13.882 1.312 5.129 1.00 0.00 1 ATOM 154 N ILE 32 11.797 4.256 5.153 1.00 0.00 1 ATOM 155 CA ILE 32 10.944 5.075 4.281 1.00 0.00 1 ATOM 156 C ILE 32 11.755 6.229 3.688 1.00 0.00 1 ATOM 157 O ILE 32 12.013 7.251 4.338 1.00 0.00 1 ATOM 158 CB ILE 32 9.916 5.579 5.312 1.00 0.00 1 ATOM 159 N ALA 33 12.143 6.033 2.443 1.00 0.00 1 ATOM 160 CA ALA 33 12.933 7.013 1.683 1.00 0.00 1 ATOM 161 C ALA 33 14.310 6.623 1.144 1.00 0.00 1 ATOM 162 O ALA 33 14.633 5.442 0.957 1.00 0.00 1 ATOM 163 CB ALA 33 13.414 7.996 2.766 1.00 0.00 1 ATOM 164 N PRO 34 15.104 7.648 0.903 1.00 0.00 1 ATOM 165 CA PRO 34 16.470 7.499 0.382 1.00 0.00 1 ATOM 166 C PRO 34 17.247 6.324 0.979 1.00 0.00 1 ATOM 167 O PRO 34 18.310 5.918 0.484 1.00 0.00 1 ATOM 168 CB PRO 34 17.066 8.804 0.942 1.00 0.00 1 ATOM 169 N TYR 35 16.683 5.799 2.052 1.00 0.00 1 ATOM 170 CA TYR 35 17.261 4.663 2.782 1.00 0.00 1 ATOM 171 C TYR 35 17.228 3.384 1.943 1.00 0.00 1 ATOM 172 O TYR 35 18.112 2.517 2.028 1.00 0.00 1 ATOM 173 CB TYR 35 16.574 4.410 4.137 1.00 0.00 1 ATOM 174 N ILE 36 16.185 3.301 1.136 1.00 0.00 1 ATOM 175 CA ILE 36 15.955 2.157 0.240 1.00 0.00 1 ATOM 176 C ILE 36 17.299 1.759 -0.374 1.00 0.00 1 ATOM 177 O ILE 36 17.485 1.748 -1.603 1.00 0.00 1 ATOM 178 CB ILE 36 14.821 2.348 -0.783 1.00 0.00 1 ATOM 179 N ALA 37 18.221 1.436 0.517 1.00 0.00 1 ATOM 180 CA ALA 37 19.581 1.022 0.145 1.00 0.00 1 ATOM 181 C ALA 37 20.250 2.169 -0.614 1.00 0.00 1 ATOM 182 O ALA 37 21.148 1.972 -1.439 1.00 0.00 1 ATOM 183 CB ALA 37 19.463 -0.066 -0.938 1.00 0.00 1 ATOM 184 N GLN 38 19.783 3.363 -0.307 1.00 0.00 1 ATOM 185 CA GLN 38 20.284 4.603 -0.918 1.00 0.00 1 ATOM 186 C GLN 38 21.515 5.216 -0.246 1.00 0.00 1 ATOM 187 O GLN 38 22.097 6.208 -0.716 1.00 0.00 1 ATOM 188 CB GLN 38 19.194 5.634 -0.570 1.00 0.00 1 ATOM 189 N ASN 39 21.886 4.598 0.859 1.00 0.00 1 ATOM 190 CA ASN 39 23.042 5.020 1.662 1.00 0.00 1 ATOM 191 C ASN 39 23.809 3.744 2.014 1.00 0.00 1 ATOM 192 O ASN 39 23.381 2.926 2.839 1.00 0.00 1 ATOM 193 CB ASN 39 22.552 5.370 3.080 1.00 0.00 1 ATOM 194 N GLU 40 24.948 3.605 1.363 1.00 0.00 1 ATOM 195 CA GLU 40 25.842 2.453 1.548 1.00 0.00 1 ATOM 196 C GLU 40 27.010 3.047 2.339 1.00 0.00 1 ATOM 197 O GLU 40 27.933 3.665 1.786 1.00 0.00 1 ATOM 198 CB GLU 40 26.362 2.017 0.166 1.00 0.00 1 ATOM 199 N PHE 41 26.935 2.840 3.641 1.00 0.00 1 ATOM 200 CA PHE 41 27.952 3.325 4.586 1.00 0.00 2 ATOM 201 C PHE 41 28.292 2.057 5.373 1.00 0.00 2 ATOM 202 O PHE 41 29.305 1.385 5.127 1.00 0.00 2 ATOM 203 CB PHE 41 27.186 4.425 5.344 1.00 0.00 2 ATOM 204 N SER 42 27.419 1.761 6.317 1.00 0.00 2 ATOM 205 CA SER 42 27.553 0.585 7.190 1.00 0.00 2 ATOM 206 C SER 42 26.761 -0.627 6.696 1.00 0.00 2 ATOM 207 O SER 42 26.431 -1.548 7.455 1.00 0.00 2 ATOM 208 CB SER 42 26.954 0.906 8.572 1.00 0.00 2 ATOM 209 N GLY 43 26.473 -0.592 5.409 1.00 0.00 2 ATOM 210 CA GLY 43 25.720 -1.655 4.727 1.00 0.00 2 ATOM 211 C GLY 43 26.693 -2.509 3.911 1.00 0.00 2 ATOM 212 O GLY 43 27.730 -2.977 4.406 1.00 0.00 2 ATOM 213 N TRP 44 26.324 -2.694 2.658 1.00 0.00 2 ATOM 214 CA TRP 44 27.112 -3.482 1.700 1.00 0.00 2 ATOM 215 C TRP 44 27.461 -2.449 0.626 1.00 0.00 2 ATOM 216 O TRP 44 26.737 -1.469 0.397 1.00 0.00 2 ATOM 217 CB TRP 44 26.202 -4.601 1.157 1.00 0.00 2 ATOM 218 N GLU 45 28.588 -2.702 -0.015 1.00 0.00 2 ATOM 219 CA GLU 45 29.112 -1.839 -1.083 1.00 0.00 2 ATOM 220 C GLU 45 29.672 -2.634 -2.263 1.00 0.00 2 ATOM 221 O GLU 45 30.562 -3.484 -2.119 1.00 0.00 2 ATOM 222 CB GLU 45 30.183 -1.074 -0.285 1.00 0.00 2 ATOM 223 N SER 46 29.124 -2.332 -3.424 1.00 0.00 2 ATOM 224 CA SER 46 29.514 -2.976 -4.688 1.00 0.00 2 ATOM 225 C SER 46 29.614 -4.486 -4.461 1.00 0.00 2 ATOM 226 O SER 46 30.365 -5.204 -5.136 1.00 0.00 2 ATOM 227 CB SER 46 30.953 -2.468 -4.899 1.00 0.00 2 ATOM 228 N LYS 47 28.835 -4.935 -3.494 1.00 0.00 2 ATOM 229 CA LYS 47 28.776 -6.353 -3.110 1.00 0.00 2 ATOM 230 C LYS 47 27.265 -6.588 -3.181 1.00 0.00 2 ATOM 231 O LYS 47 26.447 -5.706 -2.874 1.00 0.00 2 ATOM 232 CB LYS 47 29.287 -6.770 -1.719 1.00 0.00 2 ATOM 233 N LEU 48 26.930 -7.797 -3.592 1.00 0.00 2 ATOM 234 CA LEU 48 25.534 -8.235 -3.733 1.00 0.00 2 ATOM 235 C LEU 48 25.374 -9.476 -2.853 1.00 0.00 2 ATOM 236 O LEU 48 25.931 -10.550 -3.124 1.00 0.00 2 ATOM 237 CB LEU 48 25.447 -8.661 -5.211 1.00 0.00 2 ATOM 238 N GLY 49 24.601 -9.289 -1.799 1.00 0.00 2 ATOM 239 CA GLY 49 24.312 -10.348 -0.822 1.00 0.00 2 ATOM 240 C GLY 49 22.785 -10.435 -0.827 1.00 0.00 2 ATOM 241 O GLY 49 22.172 -11.195 -1.593 1.00 0.00 2 ATOM 242 N ASN 50 22.198 -9.638 0.045 1.00 0.00 2 ATOM 243 CA ASN 50 20.739 -9.563 0.207 1.00 0.00 2 ATOM 244 C ASN 50 20.176 -8.400 -0.612 1.00 0.00 2 ATOM 245 O ASN 50 20.769 -7.948 -1.605 1.00 0.00 2 ATOM 246 CB ASN 50 20.185 -9.404 1.636 1.00 0.00 2 ATOM 247 N GLY 51 19.022 -7.937 -0.164 1.00 0.00 2 ATOM 248 CA GLY 51 18.306 -6.824 -0.802 1.00 0.00 2 ATOM 249 C GLY 51 19.396 -6.155 -1.641 1.00 0.00 2 ATOM 250 O GLY 51 19.876 -5.050 -1.334 1.00 0.00 2 ATOM 251 N GLU 52 19.765 -6.856 -2.700 1.00 0.00 2 ATOM 252 CA GLU 52 20.796 -6.400 -3.642 1.00 0.00 2 ATOM 253 C GLU 52 19.935 -6.261 -4.899 1.00 0.00 2 ATOM 254 O GLU 52 19.429 -7.241 -5.456 1.00 0.00 2 ATOM 255 CB GLU 52 21.670 -7.665 -3.725 1.00 0.00 2 ATOM 256 N ILE 53 19.789 -5.021 -5.320 1.00 0.00 2 ATOM 257 CA ILE 53 19.001 -4.662 -6.509 1.00 0.00 2 ATOM 258 C ILE 53 19.828 -4.700 -7.795 1.00 0.00 2 ATOM 259 O ILE 53 20.922 -4.128 -7.890 1.00 0.00 2 ATOM 260 CB ILE 53 18.350 -3.276 -6.345 1.00 0.00 2 ATOM 261 N THR 54 19.271 -5.390 -8.772 1.00 0.00 2 ATOM 262 CA THR 54 19.894 -5.556 -10.093 1.00 0.00 2 ATOM 263 C THR 54 19.812 -4.133 -10.652 1.00 0.00 2 ATOM 264 O THR 54 20.578 -3.730 -11.543 1.00 0.00 2 ATOM 265 CB THR 54 18.962 -6.594 -10.748 1.00 0.00 2 ATOM 266 N VAL 55 18.865 -3.395 -10.102 1.00 0.00 2 ATOM 267 CA VAL 55 18.613 -2.000 -10.490 1.00 0.00 2 ATOM 268 C VAL 55 19.539 -1.052 -9.725 1.00 0.00 2 ATOM 269 O VAL 55 19.671 -1.115 -8.494 1.00 0.00 2 ATOM 270 CB VAL 55 17.124 -1.670 -10.277 1.00 0.00 2 ATOM 271 N LYS 56 20.169 -0.181 -10.492 1.00 0.00 2 ATOM 272 CA LYS 56 21.106 0.821 -9.963 1.00 0.00 2 ATOM 273 C LYS 56 20.229 1.720 -9.088 1.00 0.00 2 ATOM 274 O LYS 56 20.683 2.319 -8.102 1.00 0.00 2 ATOM 275 CB LYS 56 21.464 1.765 -11.125 1.00 0.00 2 ATOM 276 N GLU 57 18.971 1.791 -9.482 1.00 0.00 2 ATOM 277 CA GLU 57 17.958 2.598 -8.785 1.00 0.00 2 ATOM 278 C GLU 57 16.958 1.526 -8.348 1.00 0.00 2 ATOM 279 O GLU 57 16.640 0.584 -9.088 1.00 0.00 2 ATOM 280 CB GLU 57 17.197 3.367 -9.880 1.00 0.00 2 ATOM 281 N PHE 58 16.480 1.700 -7.131 1.00 0.00 2 ATOM 282 CA PHE 58 15.506 0.788 -6.513 1.00 0.00 2 ATOM 283 C PHE 58 14.187 1.547 -6.365 1.00 0.00 2 ATOM 284 O PHE 58 14.060 2.498 -5.581 1.00 0.00 2 ATOM 285 CB PHE 58 16.164 0.550 -5.141 1.00 0.00 2 ATOM 286 N ILE 59 13.218 1.099 -7.139 1.00 0.00 2 ATOM 287 CA ILE 59 11.869 1.683 -7.157 1.00 0.00 2 ATOM 288 C ILE 59 12.005 3.122 -7.658 1.00 0.00 2 ATOM 289 O ILE 59 11.192 4.004 -7.349 1.00 0.00 2 ATOM 290 CB ILE 59 11.420 1.769 -5.687 1.00 0.00 2 ATOM 291 N GLU 60 13.053 3.325 -8.434 1.00 0.00 2 ATOM 292 CA GLU 60 13.374 4.633 -9.023 1.00 0.00 2 ATOM 293 C GLU 60 13.677 4.417 -10.507 1.00 0.00 2 ATOM 294 O GLU 60 14.415 3.501 -10.900 1.00 0.00 2 ATOM 295 CB GLU 60 14.659 5.046 -8.282 1.00 0.00 2 ATOM 296 N GLY 61 13.087 5.282 -11.308 1.00 0.00 2 ATOM 297 CA GLY 61 13.242 5.256 -12.771 1.00 0.00 2 ATOM 298 C GLY 61 13.030 3.927 -13.496 1.00 0.00 2 ATOM 299 O GLY 61 13.509 3.706 -14.618 1.00 0.00 2 ATOM 300 N LEU 62 12.301 3.058 -12.823 1.00 0.00 3 ATOM 301 CA LEU 62 11.975 1.719 -13.335 1.00 0.00 3 ATOM 302 C LEU 62 11.561 1.882 -14.800 1.00 0.00 3 ATOM 303 O LEU 62 10.863 1.040 -15.385 1.00 0.00 3 ATOM 304 CB LEU 62 10.743 1.346 -12.488 1.00 0.00 3 ATOM 305 N GLY 63 12.016 2.986 -15.364 1.00 0.00 3 ATOM 306 CA GLY 63 11.737 3.341 -16.763 1.00 0.00 3 ATOM 307 C GLY 63 10.607 4.368 -16.683 1.00 0.00 3 ATOM 308 O GLY 63 10.743 5.525 -17.100 1.00 0.00 3 ATOM 309 N TYR 64 9.498 3.906 -16.137 1.00 0.00 3 ATOM 310 CA TYR 64 8.289 4.723 -15.963 1.00 0.00 3 ATOM 311 C TYR 64 8.024 5.280 -14.562 1.00 0.00 3 ATOM 312 O TYR 64 8.417 4.701 -13.542 1.00 0.00 3 ATOM 313 CB TYR 64 7.195 3.650 -16.120 1.00 0.00 3 ATOM 314 N SER 65 7.351 6.412 -14.550 1.00 0.00 3 ATOM 315 CA SER 65 6.990 7.120 -13.312 1.00 0.00 3 ATOM 316 C SER 65 5.876 6.237 -12.743 1.00 0.00 3 ATOM 317 O SER 65 5.711 6.091 -11.520 1.00 0.00 3 ATOM 318 CB SER 65 6.084 8.328 -13.614 1.00 0.00 3 TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 309 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 90.69 39.5 124 100.0 124 ARMSMC SECONDARY STRUCTURE . . 86.71 41.5 82 100.0 82 ARMSMC SURFACE . . . . . . . . 93.92 40.0 90 100.0 90 ARMSMC BURIED . . . . . . . . 81.52 38.2 34 100.0 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 50 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 47 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 32 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 41 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 36 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 27 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 15 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 11 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 9 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 5 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.74 (Number of atoms: 63) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.74 63 100.0 63 CRMSCA CRN = ALL/NP . . . . . 0.1706 CRMSCA SECONDARY STRUCTURE . . 11.31 41 100.0 41 CRMSCA SURFACE . . . . . . . . 11.21 46 100.0 46 CRMSCA BURIED . . . . . . . . 9.37 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.74 309 100.0 309 CRMSMC SECONDARY STRUCTURE . . 11.29 201 100.0 201 CRMSMC SURFACE . . . . . . . . 11.19 226 100.0 226 CRMSMC BURIED . . . . . . . . 9.41 83 100.0 83 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.93 57 7.6 750 CRMSSC RELIABLE SIDE CHAINS . 10.93 57 7.8 730 CRMSSC SECONDARY STRUCTURE . . 11.39 37 7.6 484 CRMSSC SURFACE . . . . . . . . 11.74 42 7.6 554 CRMSSC BURIED . . . . . . . . 8.26 15 7.7 196 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.74 309 30.8 1002 CRMSALL SECONDARY STRUCTURE . . 11.29 201 31.0 648 CRMSALL SURFACE . . . . . . . . 11.19 226 30.6 738 CRMSALL BURIED . . . . . . . . 9.41 83 31.4 264 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.494 1.000 0.500 63 100.0 63 ERRCA SECONDARY STRUCTURE . . 9.955 1.000 0.500 41 100.0 41 ERRCA SURFACE . . . . . . . . 9.959 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 8.236 1.000 0.500 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.505 1.000 0.500 309 100.0 309 ERRMC SECONDARY STRUCTURE . . 9.965 1.000 0.500 201 100.0 201 ERRMC SURFACE . . . . . . . . 9.961 1.000 0.500 226 100.0 226 ERRMC BURIED . . . . . . . . 8.264 1.000 0.500 83 100.0 83 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.770 1.000 0.500 57 7.6 750 ERRSC RELIABLE SIDE CHAINS . 9.770 1.000 0.500 57 7.8 730 ERRSC SECONDARY STRUCTURE . . 10.148 1.000 0.500 37 7.6 484 ERRSC SURFACE . . . . . . . . 10.540 1.000 0.500 42 7.6 554 ERRSC BURIED . . . . . . . . 7.614 1.000 0.500 15 7.7 196 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.505 1.000 0.500 309 30.8 1002 ERRALL SECONDARY STRUCTURE . . 9.965 1.000 0.500 201 31.0 648 ERRALL SURFACE . . . . . . . . 9.961 1.000 0.500 226 30.6 738 ERRALL BURIED . . . . . . . . 8.264 1.000 0.500 83 31.4 264 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 2 5 10 39 63 63 DISTCA CA (P) 1.59 3.17 7.94 15.87 61.90 63 DISTCA CA (RMS) 0.71 1.21 2.33 3.37 6.82 DISTCA ALL (N) 4 7 21 47 193 309 1002 DISTALL ALL (P) 0.40 0.70 2.10 4.69 19.26 1002 DISTALL ALL (RMS) 0.63 1.08 2.17 3.32 6.90 DISTALL END of the results output