####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 63 ( 498), selected 63 , name T0553TS291_1-D1 # Molecule2: number of CA atoms 63 ( 1002), selected 63 , name T0553-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0553TS291_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 62 3 - 64 4.81 5.10 LONGEST_CONTINUOUS_SEGMENT: 62 4 - 65 4.94 5.09 LCS_AVERAGE: 98.41 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 38 - 63 1.77 5.60 LONGEST_CONTINUOUS_SEGMENT: 26 39 - 64 1.83 6.24 LCS_AVERAGE: 31.47 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 41 - 63 0.98 6.05 LCS_AVERAGE: 24.01 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 63 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 3 V 3 3 3 62 3 3 4 4 4 4 8 10 12 14 14 15 16 17 53 57 59 60 61 61 LCS_GDT F 4 F 4 3 3 62 3 3 4 4 4 6 8 10 40 42 45 50 53 54 56 57 59 60 61 61 LCS_GDT K 5 K 5 3 6 62 3 11 21 25 31 35 39 41 42 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT R 6 R 6 7 8 62 3 5 7 7 20 21 31 38 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT V 7 V 7 7 10 62 3 5 7 7 11 16 21 23 42 45 49 51 53 55 56 58 59 60 61 61 LCS_GDT A 8 A 8 7 13 62 3 5 7 9 12 15 17 21 24 26 30 35 42 47 54 58 58 60 61 61 LCS_GDT G 9 G 9 7 13 62 4 5 7 7 11 12 16 17 25 33 39 41 47 51 54 58 59 60 61 61 LCS_GDT I 10 I 10 7 21 62 4 5 7 11 16 22 32 38 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT K 11 K 11 7 21 62 4 5 14 17 19 20 22 25 31 43 49 51 53 55 56 58 59 60 61 61 LCS_GDT D 12 D 12 17 21 62 7 13 16 18 20 21 25 36 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT K 13 K 13 17 21 62 7 13 16 18 20 21 24 26 39 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT A 14 A 14 17 21 62 7 13 16 18 20 21 25 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT A 15 A 15 17 21 62 7 13 16 25 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT I 16 I 16 17 21 62 7 11 16 18 30 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT K 17 K 17 17 21 62 7 13 16 18 20 21 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT T 18 T 18 17 21 62 7 13 16 20 26 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT L 19 L 19 17 21 62 9 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT I 20 I 20 17 21 62 7 13 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT S 21 S 21 17 21 62 7 13 16 18 20 27 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT A 22 A 22 17 21 62 7 13 16 21 24 30 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT A 23 A 23 17 21 62 7 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT Y 24 Y 24 17 21 62 7 12 16 18 30 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT R 25 R 25 17 21 62 7 13 16 18 20 23 32 38 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT Q 26 Q 26 17 21 62 6 13 16 18 20 30 34 40 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT I 27 I 27 17 21 62 4 11 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT F 28 F 28 17 21 62 4 12 16 24 30 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT E 29 E 29 14 21 62 4 6 14 18 28 33 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT R 30 R 30 5 21 62 3 5 5 9 18 28 34 39 42 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT D 31 D 31 3 9 62 3 3 3 5 11 12 18 24 28 36 44 49 52 55 56 58 59 60 61 61 LCS_GDT I 32 I 32 3 3 62 3 3 4 9 20 25 33 39 42 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT A 33 A 33 7 7 62 7 7 7 10 17 23 32 37 41 45 49 51 53 55 56 58 59 60 61 61 LCS_GDT P 34 P 34 7 7 62 7 7 7 7 7 7 10 15 29 33 40 44 51 53 55 57 59 60 61 61 LCS_GDT Y 35 Y 35 7 7 62 7 7 7 7 7 7 7 9 11 16 37 46 51 54 56 58 59 60 61 61 LCS_GDT I 36 I 36 7 7 62 7 7 7 22 29 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT A 37 A 37 7 7 62 7 7 7 7 7 7 10 15 29 43 47 51 53 55 56 58 59 60 61 61 LCS_GDT Q 38 Q 38 7 26 62 7 7 7 7 7 15 24 36 39 44 47 50 53 55 56 58 59 60 61 61 LCS_GDT N 39 N 39 7 26 62 7 15 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT E 40 E 40 4 26 62 3 4 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT F 41 F 41 23 26 62 9 13 21 26 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT S 42 S 42 23 26 62 9 17 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT G 43 G 43 23 26 62 9 17 21 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT W 44 W 44 23 26 62 7 13 21 26 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT E 45 E 45 23 26 62 9 13 21 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT S 46 S 46 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT K 47 K 47 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT L 48 L 48 23 26 62 9 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT G 49 G 49 23 26 62 9 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT N 50 N 50 23 26 62 9 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT G 51 G 51 23 26 62 8 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT E 52 E 52 23 26 62 5 15 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT I 53 I 53 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT T 54 T 54 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT V 55 V 55 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT K 56 K 56 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT E 57 E 57 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT F 58 F 58 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT I 59 I 59 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT E 60 E 60 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT G 61 G 61 23 26 62 10 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT L 62 L 62 23 26 62 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT G 63 G 63 23 26 62 8 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 LCS_GDT Y 64 Y 64 3 26 62 3 3 5 6 10 10 17 28 32 36 38 43 48 49 52 53 57 60 61 61 LCS_GDT S 65 S 65 3 3 62 2 3 4 5 5 5 7 12 15 18 19 25 28 39 42 43 46 53 56 60 LCS_AVERAGE LCS_A: 51.30 ( 24.01 31.47 98.41 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 18 22 27 31 35 39 41 44 46 49 51 53 55 56 58 59 60 61 61 GDT PERCENT_AT 17.46 28.57 34.92 42.86 49.21 55.56 61.90 65.08 69.84 73.02 77.78 80.95 84.13 87.30 88.89 92.06 93.65 95.24 96.83 96.83 GDT RMS_LOCAL 0.32 0.63 0.81 1.11 1.38 1.71 1.99 2.17 2.58 2.78 3.05 3.31 3.49 3.78 3.85 4.28 4.29 4.49 4.66 4.64 GDT RMS_ALL_AT 5.54 5.56 5.60 5.66 5.82 5.63 5.64 5.60 5.49 5.35 5.34 5.21 5.19 5.16 5.18 5.14 5.16 5.12 5.10 5.13 # Checking swapping # possible swapping detected: F 4 F 4 # possible swapping detected: D 12 D 12 # possible swapping detected: D 31 D 31 # possible swapping detected: Y 35 Y 35 # possible swapping detected: E 40 E 40 # possible swapping detected: E 45 E 45 # possible swapping detected: E 57 E 57 # possible swapping detected: F 58 F 58 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 3 V 3 9.050 0 0.570 0.607 12.301 7.143 4.286 LGA F 4 F 4 5.279 0 0.583 1.073 10.971 30.000 13.074 LGA K 5 K 5 2.876 0 0.616 1.227 7.067 51.905 38.995 LGA R 6 R 6 6.169 0 0.612 1.060 15.758 19.643 7.922 LGA V 7 V 7 8.803 0 0.138 0.204 11.377 4.405 3.129 LGA A 8 A 8 13.919 0 0.215 0.221 16.156 0.000 0.000 LGA G 9 G 9 13.546 0 0.056 0.056 13.546 0.000 0.000 LGA I 10 I 10 7.704 0 0.097 0.127 9.646 3.810 11.786 LGA K 11 K 11 9.437 0 0.044 1.095 20.220 2.857 1.270 LGA D 12 D 12 5.955 0 0.225 1.256 6.436 24.048 32.917 LGA K 13 K 13 6.000 0 0.098 0.743 9.916 22.738 13.862 LGA A 14 A 14 4.181 0 0.034 0.048 4.795 43.929 42.571 LGA A 15 A 15 2.121 0 0.031 0.040 2.850 64.881 63.333 LGA I 16 I 16 2.753 0 0.022 0.687 4.226 62.976 53.214 LGA K 17 K 17 3.397 0 0.091 0.756 5.856 50.000 39.259 LGA T 18 T 18 2.982 0 0.046 0.126 3.764 57.262 52.245 LGA L 19 L 19 1.546 0 0.032 1.123 6.430 77.143 59.881 LGA I 20 I 20 1.345 0 0.028 1.315 5.084 79.405 65.357 LGA S 21 S 21 3.603 0 0.049 0.652 4.401 45.238 47.143 LGA A 22 A 22 3.787 0 0.052 0.064 4.075 46.667 44.762 LGA A 23 A 23 1.514 0 0.063 0.064 2.047 75.119 76.381 LGA Y 24 Y 24 2.771 0 0.026 1.257 6.723 54.167 38.690 LGA R 25 R 25 5.599 0 0.239 1.287 6.575 25.476 23.810 LGA Q 26 Q 26 5.108 0 0.040 1.308 8.785 34.524 23.915 LGA I 27 I 27 1.859 0 0.182 1.234 5.068 71.071 62.143 LGA F 28 F 28 2.219 0 0.076 1.272 4.314 61.667 56.580 LGA E 29 E 29 4.269 0 0.356 1.156 7.350 29.643 35.238 LGA R 30 R 30 7.489 0 0.640 1.395 9.419 8.929 7.186 LGA D 31 D 31 11.442 0 0.612 1.252 16.829 0.119 0.060 LGA I 32 I 32 6.410 0 0.639 1.091 8.009 11.310 26.726 LGA A 33 A 33 8.161 0 0.570 0.582 9.080 7.738 6.476 LGA P 34 P 34 11.780 0 0.052 0.351 15.382 0.119 0.068 LGA Y 35 Y 35 10.076 0 0.098 1.100 18.266 6.786 2.262 LGA I 36 I 36 2.927 0 0.029 0.672 6.110 58.214 50.417 LGA A 37 A 37 6.351 0 0.103 0.115 8.832 18.095 15.048 LGA Q 38 Q 38 7.552 0 0.131 0.895 15.671 18.214 8.148 LGA N 39 N 39 0.992 0 0.281 0.259 3.949 73.452 69.643 LGA E 40 E 40 1.377 0 0.072 0.736 6.449 75.476 53.915 LGA F 41 F 41 3.179 0 0.309 0.466 6.126 59.286 38.009 LGA S 42 S 42 1.977 0 0.072 0.642 3.669 68.810 65.238 LGA G 43 G 43 2.447 0 0.065 0.065 2.704 60.952 60.952 LGA W 44 W 44 3.062 0 0.075 1.048 4.804 57.262 43.435 LGA E 45 E 45 2.229 0 0.026 1.024 4.342 66.905 57.196 LGA S 46 S 46 1.299 0 0.099 0.644 3.078 81.429 74.762 LGA K 47 K 47 1.608 0 0.102 0.866 2.657 75.000 71.217 LGA L 48 L 48 1.229 0 0.028 1.396 4.036 81.429 73.750 LGA G 49 G 49 1.347 0 0.045 0.045 1.518 79.286 79.286 LGA N 50 N 50 1.458 0 0.095 0.142 3.159 83.690 70.595 LGA G 51 G 51 1.075 0 0.053 0.053 1.409 83.690 83.690 LGA E 52 E 52 1.178 0 0.120 0.891 3.220 79.524 73.439 LGA I 53 I 53 0.811 0 0.122 1.380 3.921 83.810 74.821 LGA T 54 T 54 0.879 0 0.026 0.074 1.496 92.857 89.252 LGA V 55 V 55 0.648 0 0.052 1.059 3.199 95.238 84.898 LGA K 56 K 56 0.391 0 0.059 1.137 7.285 100.000 69.101 LGA E 57 E 57 0.356 0 0.026 1.227 5.274 100.000 78.360 LGA F 58 F 58 0.455 0 0.065 1.347 6.084 95.238 67.532 LGA I 59 I 59 0.594 0 0.050 0.591 1.546 92.857 89.464 LGA E 60 E 60 1.001 0 0.034 0.591 2.281 83.690 83.598 LGA G 61 G 61 1.252 0 0.063 0.063 1.824 79.286 79.286 LGA L 62 L 62 0.985 0 0.039 0.176 1.233 83.690 87.143 LGA G 63 G 63 1.736 0 0.303 0.303 5.218 52.976 52.976 LGA Y 64 Y 64 9.294 0 0.653 1.048 17.280 4.643 1.548 LGA S 65 S 65 13.429 0 0.189 0.793 14.780 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 63 252 252 100.00 498 498 100.00 63 SUMMARY(RMSD_GDC): 5.085 4.991 6.119 50.249 44.464 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 63 63 4.0 41 2.17 57.143 52.757 1.803 LGA_LOCAL RMSD: 2.173 Number of atoms: 41 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.596 Number of assigned atoms: 63 Std_ASGN_ATOMS RMSD: 5.085 Standard rmsd on all 63 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.764114 * X + -0.463182 * Y + 0.448991 * Z + 2.349442 Y_new = 0.040717 * X + 0.729265 * Y + 0.683019 * Z + 2.647159 Z_new = -0.643795 * X + -0.503622 * Y + 0.576101 * Z + -14.199071 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.053237 0.699448 -0.718372 [DEG: 3.0502 40.0754 -41.1597 ] ZXZ: 2.560059 0.956846 -2.234633 [DEG: 146.6806 54.8232 -128.0350 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0553TS291_1-D1 REMARK 2: T0553-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0553TS291_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 63 63 4.0 41 2.17 52.757 5.09 REMARK ---------------------------------------------------------- MOLECULE T0553TS291_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0553 REMARK MODEL 1 REMARK PARENT N/A ATOM 18 N VAL 3 5.194 4.251 -11.366 1.00 1.00 N ATOM 19 CA VAL 3 5.847 3.669 -10.210 1.00 1.00 C ATOM 20 C VAL 3 7.088 2.888 -10.618 1.00 1.00 C ATOM 21 O VAL 3 8.182 3.155 -10.126 1.00 1.00 O ATOM 22 CB VAL 3 4.912 2.700 -9.463 1.00 1.00 C ATOM 23 CG1 VAL 3 5.670 1.968 -8.366 1.00 1.00 C ATOM 24 CG2 VAL 3 3.758 3.458 -8.826 1.00 1.00 C ATOM 25 N PHE 4 6.916 1.920 -11.522 1.00 1.00 N ATOM 26 CA PHE 4 8.018 1.105 -11.991 1.00 1.00 C ATOM 27 C PHE 4 9.037 1.947 -12.747 1.00 1.00 C ATOM 28 O PHE 4 10.237 1.846 -12.496 1.00 1.00 O ATOM 29 CB PHE 4 7.512 0.011 -12.932 1.00 1.00 C ATOM 30 CG PHE 4 6.704 -1.054 -12.247 1.00 1.00 C ATOM 31 CD1 PHE 4 6.703 -1.160 -10.867 1.00 1.00 C ATOM 32 CD2 PHE 4 5.945 -1.948 -12.981 1.00 1.00 C ATOM 33 CE1 PHE 4 5.960 -2.139 -10.236 1.00 1.00 C ATOM 34 CE2 PHE 4 5.202 -2.927 -12.349 1.00 1.00 C ATOM 35 CZ PHE 4 5.207 -3.026 -10.983 1.00 1.00 C ATOM 36 N LYS 5 8.558 2.777 -13.674 1.00 1.00 N ATOM 37 CA LYS 5 9.425 3.631 -14.461 1.00 1.00 C ATOM 38 C LYS 5 10.122 4.661 -13.584 1.00 1.00 C ATOM 39 O LYS 5 11.286 4.986 -13.808 1.00 1.00 O ATOM 40 CB LYS 5 8.618 4.379 -15.525 1.00 1.00 C ATOM 41 CG LYS 5 8.100 3.493 -16.646 1.00 1.00 C ATOM 42 CD LYS 5 7.314 4.300 -17.668 1.00 1.00 C ATOM 43 CE LYS 5 6.766 3.410 -18.770 1.00 1.00 C ATOM 44 NZ LYS 5 5.974 4.184 -19.766 1.00 1.00 N ATOM 45 N ARG 6 9.406 5.175 -12.581 1.00 1.00 N ATOM 46 CA ARG 6 9.956 6.163 -11.675 1.00 1.00 C ATOM 47 C ARG 6 10.819 5.508 -10.607 1.00 1.00 C ATOM 48 O ARG 6 11.660 6.164 -9.995 1.00 1.00 O ATOM 49 CB ARG 6 8.835 6.932 -10.975 1.00 1.00 C ATOM 50 CG ARG 6 8.049 7.857 -11.891 1.00 1.00 C ATOM 51 CD ARG 6 6.961 8.596 -11.129 1.00 1.00 C ATOM 52 NE ARG 6 6.193 9.486 -11.996 1.00 1.00 N ATOM 53 CZ ARG 6 5.076 10.106 -11.629 1.00 1.00 C ATOM 54 NH1 ARG 6 4.446 10.897 -12.486 1.00 1.00 H ATOM 55 NH2 ARG 6 4.594 9.935 -10.407 1.00 1.00 H ATOM 56 N VAL 7 10.609 4.209 -10.382 1.00 1.00 N ATOM 57 CA VAL 7 11.364 3.471 -9.392 1.00 1.00 C ATOM 58 C VAL 7 12.793 3.229 -9.860 1.00 1.00 C ATOM 59 O VAL 7 13.022 2.455 -10.786 1.00 1.00 O ATOM 60 CB VAL 7 10.730 2.098 -9.105 1.00 1.00 C ATOM 61 CG1 VAL 7 11.562 1.327 -8.091 1.00 1.00 C ATOM 62 CG2 VAL 7 9.325 2.265 -8.547 1.00 1.00 C ATOM 63 N ALA 8 13.754 3.895 -9.216 1.00 1.00 N ATOM 64 CA ALA 8 15.152 3.752 -9.568 1.00 1.00 C ATOM 65 C ALA 8 15.589 2.295 -9.493 1.00 1.00 C ATOM 66 O ALA 8 15.375 1.631 -8.482 1.00 1.00 O ATOM 67 CB ALA 8 16.024 4.558 -8.616 1.00 1.00 C ATOM 68 N GLY 9 16.201 1.800 -10.571 1.00 1.00 N ATOM 69 CA GLY 9 16.665 0.428 -10.625 1.00 1.00 C ATOM 70 C GLY 9 15.714 -0.421 -11.456 1.00 1.00 C ATOM 71 O GLY 9 16.008 -1.576 -11.755 1.00 1.00 O ATOM 72 N ILE 10 14.569 0.156 -11.829 1.00 1.00 N ATOM 73 CA ILE 10 13.580 -0.547 -12.623 1.00 1.00 C ATOM 74 C ILE 10 13.283 0.201 -13.915 1.00 1.00 C ATOM 75 O ILE 10 12.680 1.272 -13.892 1.00 1.00 O ATOM 76 CB ILE 10 12.252 -0.704 -11.859 1.00 1.00 C ATOM 77 CG1 ILE 10 12.471 -1.487 -10.564 1.00 1.00 C ATOM 78 CG2 ILE 10 11.236 -1.452 -12.709 1.00 1.00 C ATOM 79 CD1 ILE 10 11.254 -1.535 -9.667 1.00 1.00 C ATOM 80 N LYS 11 13.709 -0.367 -15.045 1.00 1.00 N ATOM 81 CA LYS 11 13.488 0.245 -16.340 1.00 1.00 C ATOM 82 C LYS 11 12.809 -0.726 -17.296 1.00 1.00 C ATOM 83 O LYS 11 12.652 -0.429 -18.479 1.00 1.00 O ATOM 84 CB LYS 11 14.819 0.675 -16.963 1.00 1.00 C ATOM 85 CG LYS 11 15.548 1.757 -16.184 1.00 1.00 C ATOM 86 CD LYS 11 16.868 2.119 -16.846 1.00 1.00 C ATOM 87 CE LYS 11 17.694 3.040 -15.962 1.00 1.00 C ATOM 88 NZ LYS 11 18.982 3.416 -16.606 1.00 1.00 N ATOM 89 N ASP 12 12.407 -1.890 -16.780 1.00 1.00 N ATOM 90 CA ASP 12 11.748 -2.897 -17.587 1.00 1.00 C ATOM 91 C ASP 12 10.730 -3.677 -16.766 1.00 1.00 C ATOM 92 O ASP 12 10.637 -3.497 -15.554 1.00 1.00 O ATOM 93 CB ASP 12 12.770 -3.889 -18.145 1.00 1.00 C ATOM 94 CG ASP 12 12.255 -4.634 -19.362 1.00 1.00 C ATOM 95 OD1 ASP 12 11.125 -4.340 -19.804 1.00 1.00 O ATOM 96 OD2 ASP 12 12.982 -5.512 -19.872 1.00 1.00 O ATOM 97 N LYS 13 9.966 -4.546 -17.431 1.00 1.00 N ATOM 98 CA LYS 13 8.961 -5.349 -16.763 1.00 1.00 C ATOM 99 C LYS 13 9.569 -6.153 -15.624 1.00 1.00 C ATOM 100 O LYS 13 8.999 -6.227 -14.538 1.00 1.00 O ATOM 101 CB LYS 13 8.317 -6.328 -17.747 1.00 1.00 C ATOM 102 CG LYS 13 7.421 -5.670 -18.783 1.00 1.00 C ATOM 103 CD LYS 13 6.815 -6.698 -19.723 1.00 1.00 C ATOM 104 CE LYS 13 5.939 -6.038 -20.774 1.00 1.00 C ATOM 105 NZ LYS 13 5.364 -7.031 -21.723 1.00 1.00 N ATOM 106 N ALA 14 10.734 -6.757 -15.874 1.00 1.00 N ATOM 107 CA ALA 14 11.415 -7.552 -14.872 1.00 1.00 C ATOM 108 C ALA 14 11.621 -6.758 -13.590 1.00 1.00 C ATOM 109 O ALA 14 11.391 -7.269 -12.496 1.00 1.00 O ATOM 110 CB ALA 14 12.779 -7.991 -15.381 1.00 1.00 C ATOM 111 N ALA 15 12.055 -5.503 -13.727 1.00 1.00 N ATOM 112 CA ALA 15 12.290 -4.645 -12.583 1.00 1.00 C ATOM 113 C ALA 15 10.986 -4.306 -11.876 1.00 1.00 C ATOM 114 O ALA 15 10.954 -4.172 -10.654 1.00 1.00 O ATOM 115 CB ALA 15 12.943 -3.344 -13.022 1.00 1.00 C ATOM 116 N ILE 16 9.905 -4.168 -12.647 1.00 1.00 N ATOM 117 CA ILE 16 8.605 -3.845 -12.095 1.00 1.00 C ATOM 118 C ILE 16 8.128 -4.936 -11.146 1.00 1.00 C ATOM 119 O ILE 16 7.765 -4.657 -10.005 1.00 1.00 O ATOM 120 CB ILE 16 7.544 -3.692 -13.200 1.00 1.00 C ATOM 121 CG1 ILE 16 7.838 -2.458 -14.054 1.00 1.00 C ATOM 122 CG2 ILE 16 6.159 -3.538 -12.591 1.00 1.00 C ATOM 123 CD1 ILE 16 7.012 -2.380 -15.320 1.00 1.00 C ATOM 124 N LYS 17 8.129 -6.184 -11.622 1.00 1.00 N ATOM 125 CA LYS 17 7.697 -7.310 -10.818 1.00 1.00 C ATOM 126 C LYS 17 8.680 -7.586 -9.689 1.00 1.00 C ATOM 127 O LYS 17 8.275 -7.804 -8.549 1.00 1.00 O ATOM 128 CB LYS 17 7.592 -8.572 -11.677 1.00 1.00 C ATOM 129 CG LYS 17 7.105 -9.798 -10.922 1.00 1.00 C ATOM 130 CD LYS 17 6.923 -10.985 -11.854 1.00 1.00 C ATOM 131 CE LYS 17 8.264 -11.529 -12.321 1.00 1.00 C ATOM 132 NZ LYS 17 8.102 -12.694 -13.233 1.00 1.00 N ATOM 133 N THR 18 9.975 -7.576 -10.010 1.00 1.00 N ATOM 134 CA THR 18 11.009 -7.824 -9.025 1.00 1.00 C ATOM 135 C THR 18 11.008 -6.752 -7.946 1.00 1.00 C ATOM 136 O THR 18 11.089 -7.061 -6.759 1.00 1.00 O ATOM 137 CB THR 18 12.409 -7.835 -9.667 1.00 1.00 C ATOM 138 OG1 THR 18 12.487 -8.892 -10.632 1.00 1.00 O ATOM 139 CG2 THR 18 13.479 -8.056 -8.609 1.00 1.00 C ATOM 140 N LEU 19 10.915 -5.486 -8.361 1.00 1.00 N ATOM 141 CA LEU 19 10.902 -4.374 -7.431 1.00 1.00 C ATOM 142 C LEU 19 9.581 -4.304 -6.678 1.00 1.00 C ATOM 143 O LEU 19 9.563 -4.055 -5.474 1.00 1.00 O ATOM 144 CB LEU 19 11.094 -3.052 -8.176 1.00 1.00 C ATOM 145 CG LEU 19 12.475 -2.814 -8.790 1.00 1.00 C ATOM 146 CD1 LEU 19 12.475 -1.557 -9.645 1.00 1.00 C ATOM 147 CD2 LEU 19 13.527 -2.650 -7.705 1.00 1.00 C ATOM 148 N ILE 20 8.475 -4.525 -7.391 1.00 1.00 N ATOM 149 CA ILE 20 7.157 -4.487 -6.789 1.00 1.00 C ATOM 150 C ILE 20 7.092 -5.372 -5.553 1.00 1.00 C ATOM 151 O ILE 20 6.474 -5.007 -4.556 1.00 1.00 O ATOM 152 CB ILE 20 6.074 -4.976 -7.769 1.00 1.00 C ATOM 153 CG1 ILE 20 4.680 -4.746 -7.182 1.00 1.00 C ATOM 154 CG2 ILE 20 6.240 -6.463 -8.047 1.00 1.00 C ATOM 155 CD1 ILE 20 4.338 -3.287 -6.975 1.00 1.00 C ATOM 156 N SER 21 7.734 -6.541 -5.621 1.00 1.00 N ATOM 157 CA SER 21 7.748 -7.472 -4.511 1.00 1.00 C ATOM 158 C SER 21 8.443 -6.870 -3.299 1.00 1.00 C ATOM 159 O SER 21 7.937 -6.958 -2.182 1.00 1.00 O ATOM 160 CB SER 21 8.489 -8.754 -4.897 1.00 1.00 C ATOM 161 OG SER 21 9.852 -8.490 -5.182 1.00 1.00 O ATOM 162 N ALA 22 9.608 -6.257 -3.521 1.00 1.00 N ATOM 163 CA ALA 22 10.367 -5.643 -2.450 1.00 1.00 C ATOM 164 C ALA 22 9.577 -4.520 -1.793 1.00 1.00 C ATOM 165 O ALA 22 9.668 -4.319 -0.584 1.00 1.00 O ATOM 166 CB ALA 22 11.664 -5.058 -2.988 1.00 1.00 C ATOM 167 N ALA 23 8.802 -3.787 -2.594 1.00 1.00 N ATOM 168 CA ALA 23 8.001 -2.688 -2.091 1.00 1.00 C ATOM 169 C ALA 23 6.900 -3.192 -1.167 1.00 1.00 C ATOM 170 O ALA 23 6.611 -2.571 -0.146 1.00 1.00 O ATOM 171 CB ALA 23 7.349 -1.936 -3.241 1.00 1.00 C ATOM 172 N TYR 24 6.286 -4.320 -1.530 1.00 1.00 N ATOM 173 CA TYR 24 5.222 -4.901 -0.735 1.00 1.00 C ATOM 174 C TYR 24 5.719 -5.278 0.653 1.00 1.00 C ATOM 175 O TYR 24 5.119 -4.896 1.655 1.00 1.00 O ATOM 176 CB TYR 24 4.682 -6.165 -1.407 1.00 1.00 C ATOM 177 CG TYR 24 3.592 -6.858 -0.620 1.00 1.00 C ATOM 178 CD1 TYR 24 2.284 -6.392 -0.653 1.00 1.00 C ATOM 179 CD2 TYR 24 3.876 -7.977 0.153 1.00 1.00 C ATOM 180 CE1 TYR 24 1.282 -7.019 0.063 1.00 1.00 C ATOM 181 CE2 TYR 24 2.887 -8.617 0.875 1.00 1.00 C ATOM 182 CZ TYR 24 1.582 -8.127 0.824 1.00 1.00 C ATOM 183 OH TYR 24 0.586 -8.754 1.538 1.00 1.00 H ATOM 184 N ARG 25 6.819 -6.033 0.711 1.00 1.00 N ATOM 185 CA ARG 25 7.390 -6.458 1.972 1.00 1.00 C ATOM 186 C ARG 25 7.775 -5.261 2.831 1.00 1.00 C ATOM 187 O ARG 25 7.284 -5.111 3.948 1.00 1.00 O ATOM 188 CB ARG 25 8.648 -7.297 1.736 1.00 1.00 C ATOM 189 CG ARG 25 9.277 -7.843 3.006 1.00 1.00 C ATOM 190 CD ARG 25 10.589 -8.553 2.712 1.00 1.00 C ATOM 191 NE ARG 25 11.624 -7.625 2.258 1.00 1.00 N ATOM 192 CZ ARG 25 12.323 -6.834 3.065 1.00 1.00 C ATOM 193 NH1 ARG 25 13.243 -6.023 2.563 1.00 1.00 H ATOM 194 NH2 ARG 25 12.101 -6.856 4.372 1.00 1.00 H ATOM 195 N GLN 26 8.657 -4.407 2.305 1.00 1.00 N ATOM 196 CA GLN 26 9.103 -3.229 3.023 1.00 1.00 C ATOM 197 C GLN 26 7.978 -2.215 3.164 1.00 1.00 C ATOM 198 O GLN 26 7.752 -1.681 4.248 1.00 1.00 O ATOM 199 CB GLN 26 10.260 -2.557 2.281 1.00 1.00 C ATOM 200 CG GLN 26 11.556 -3.350 2.303 1.00 1.00 C ATOM 201 CD GLN 26 12.634 -2.728 1.438 1.00 1.00 C ATOM 202 OE1 GLN 26 12.390 -1.752 0.729 1.00 1.00 O ATOM 203 NE2 GLN 26 13.835 -3.293 1.493 1.00 1.00 N ATOM 204 N ILE 27 7.271 -1.948 2.063 1.00 1.00 N ATOM 205 CA ILE 27 6.175 -1.001 2.067 1.00 1.00 C ATOM 206 C ILE 27 4.987 -1.541 2.849 1.00 1.00 C ATOM 207 O ILE 27 4.243 -0.778 3.461 1.00 1.00 O ATOM 208 CB ILE 27 5.691 -0.693 0.638 1.00 1.00 C ATOM 209 CG1 ILE 27 5.128 -1.956 -0.018 1.00 1.00 C ATOM 210 CG2 ILE 27 6.840 -0.178 -0.215 1.00 1.00 C ATOM 211 CD1 ILE 27 4.462 -1.705 -1.353 1.00 1.00 C ATOM 212 N PHE 28 4.810 -2.865 2.829 1.00 1.00 N ATOM 213 CA PHE 28 3.715 -3.501 3.534 1.00 1.00 C ATOM 214 C PHE 28 4.009 -3.602 5.024 1.00 1.00 C ATOM 215 O PHE 28 3.091 -3.608 5.841 1.00 1.00 O ATOM 216 CB PHE 28 3.483 -4.915 2.998 1.00 1.00 C ATOM 217 CG PHE 28 2.278 -5.594 3.583 1.00 1.00 C ATOM 218 CD1 PHE 28 1.003 -5.251 3.169 1.00 1.00 C ATOM 219 CD2 PHE 28 2.419 -6.577 4.547 1.00 1.00 C ATOM 220 CE1 PHE 28 -0.106 -5.876 3.706 1.00 1.00 C ATOM 221 CE2 PHE 28 1.310 -7.202 5.085 1.00 1.00 C ATOM 222 CZ PHE 28 0.052 -6.855 4.669 1.00 1.00 C ATOM 223 N GLU 29 5.294 -3.682 5.376 1.00 1.00 N ATOM 224 CA GLU 29 5.704 -3.782 6.763 1.00 1.00 C ATOM 225 C GLU 29 5.078 -4.997 7.433 1.00 1.00 C ATOM 226 O GLU 29 5.296 -6.128 7.002 1.00 1.00 O ATOM 227 CB GLU 29 5.273 -2.537 7.540 1.00 1.00 C ATOM 228 CG GLU 29 5.993 -1.264 7.123 1.00 1.00 C ATOM 229 CD GLU 29 7.492 -1.348 7.332 1.00 1.00 C ATOM 230 OE1 GLU 29 7.917 -1.665 8.463 1.00 1.00 O ATOM 231 OE2 GLU 29 8.242 -1.096 6.365 1.00 1.00 O ATOM 232 N ARG 30 4.298 -4.762 8.491 1.00 1.00 N ATOM 233 CA ARG 30 3.646 -5.835 9.214 1.00 1.00 C ATOM 234 C ARG 30 2.717 -6.624 8.303 1.00 1.00 C ATOM 235 O ARG 30 2.399 -7.778 8.585 1.00 1.00 O ATOM 236 CB ARG 30 2.815 -5.273 10.369 1.00 1.00 C ATOM 237 CG ARG 30 3.642 -4.695 11.506 1.00 1.00 C ATOM 238 CD ARG 30 2.756 -4.100 12.587 1.00 1.00 C ATOM 239 NE ARG 30 3.536 -3.472 13.651 1.00 1.00 N ATOM 240 CZ ARG 30 3.025 -2.672 14.581 1.00 1.00 C ATOM 241 NH1 ARG 30 3.811 -2.146 15.509 1.00 1.00 H ATOM 242 NH2 ARG 30 1.727 -2.402 14.581 1.00 1.00 H ATOM 243 N ASP 31 2.279 -5.998 7.207 1.00 1.00 N ATOM 244 CA ASP 31 1.391 -6.642 6.261 1.00 1.00 C ATOM 245 C ASP 31 2.171 -7.488 5.265 1.00 1.00 C ATOM 246 O ASP 31 1.738 -8.579 4.900 1.00 1.00 O ATOM 247 CB ASP 31 0.594 -5.598 5.478 1.00 1.00 C ATOM 248 CG ASP 31 -0.466 -4.920 6.322 1.00 1.00 C ATOM 249 OD1 ASP 31 -0.771 -5.434 7.419 1.00 1.00 O ATOM 250 OD2 ASP 31 -0.991 -3.872 5.888 1.00 1.00 O ATOM 251 N ILE 32 3.324 -6.981 4.825 1.00 1.00 N ATOM 252 CA ILE 32 4.159 -7.689 3.875 1.00 1.00 C ATOM 253 C ILE 32 4.853 -8.875 4.531 1.00 1.00 C ATOM 254 O ILE 32 5.125 -9.878 3.877 1.00 1.00 O ATOM 255 CB ILE 32 5.252 -6.773 3.293 1.00 1.00 C ATOM 256 CG1 ILE 32 6.204 -6.311 4.398 1.00 1.00 C ATOM 257 CG2 ILE 32 4.631 -5.545 2.647 1.00 1.00 C ATOM 258 CD1 ILE 32 7.413 -5.559 3.886 1.00 1.00 C ATOM 259 N ALA 33 5.137 -8.756 5.830 1.00 1.00 N ATOM 260 CA ALA 33 5.796 -9.814 6.569 1.00 1.00 C ATOM 261 C ALA 33 5.116 -11.154 6.331 1.00 1.00 C ATOM 262 O ALA 33 5.754 -12.108 5.889 1.00 1.00 O ATOM 263 CB ALA 33 5.758 -9.522 8.061 1.00 1.00 C ATOM 264 N PRO 34 3.816 -11.226 6.625 1.00 1.00 N ATOM 265 CA PRO 34 3.054 -12.448 6.442 1.00 1.00 C ATOM 266 C PRO 34 2.782 -12.707 4.968 1.00 1.00 C ATOM 267 O PRO 34 2.658 -13.857 4.549 1.00 1.00 O ATOM 268 CB PRO 34 1.758 -12.195 7.214 1.00 1.00 C ATOM 269 CG PRO 34 1.644 -10.708 7.277 1.00 1.00 C ATOM 270 CD PRO 34 3.051 -10.187 7.363 1.00 1.00 C ATOM 271 N TYR 35 2.688 -11.639 4.170 1.00 1.00 N ATOM 272 CA TYR 35 2.430 -11.796 2.753 1.00 1.00 C ATOM 273 C TYR 35 3.520 -12.624 2.086 1.00 1.00 C ATOM 274 O TYR 35 3.227 -13.540 1.321 1.00 1.00 O ATOM 275 CB TYR 35 2.379 -10.433 2.063 1.00 1.00 C ATOM 276 CG TYR 35 1.117 -9.650 2.344 1.00 1.00 C ATOM 277 CD1 TYR 35 1.118 -8.601 3.254 1.00 1.00 C ATOM 278 CD2 TYR 35 -0.072 -9.963 1.697 1.00 1.00 C ATOM 279 CE1 TYR 35 -0.032 -7.880 3.518 1.00 1.00 C ATOM 280 CE2 TYR 35 -1.232 -9.253 1.949 1.00 1.00 C ATOM 281 CZ TYR 35 -1.202 -8.204 2.868 1.00 1.00 C ATOM 282 OH TYR 35 -2.348 -7.489 3.128 1.00 1.00 H ATOM 283 N ILE 36 4.780 -12.300 2.381 1.00 1.00 N ATOM 284 CA ILE 36 5.907 -13.011 1.812 1.00 1.00 C ATOM 285 C ILE 36 5.890 -14.479 2.218 1.00 1.00 C ATOM 286 O ILE 36 6.154 -15.355 1.398 1.00 1.00 O ATOM 287 CB ILE 36 7.246 -12.414 2.281 1.00 1.00 C ATOM 288 CG1 ILE 36 7.398 -10.979 1.772 1.00 1.00 C ATOM 289 CG2 ILE 36 8.411 -13.238 1.752 1.00 1.00 C ATOM 290 CD1 ILE 36 7.405 -10.863 0.264 1.00 1.00 C ATOM 291 N ALA 37 5.578 -14.743 3.488 1.00 1.00 N ATOM 292 CA ALA 37 5.528 -16.098 3.998 1.00 1.00 C ATOM 293 C ALA 37 4.272 -16.815 3.525 1.00 1.00 C ATOM 294 O ALA 37 4.164 -18.034 3.651 1.00 1.00 O ATOM 295 CB ALA 37 5.528 -16.094 5.518 1.00 1.00 C ATOM 296 N GLN 38 3.320 -16.056 2.978 1.00 1.00 N ATOM 297 CA GLN 38 2.077 -16.619 2.490 1.00 1.00 C ATOM 298 C GLN 38 2.102 -16.768 0.975 1.00 1.00 C ATOM 299 O GLN 38 1.081 -17.072 0.362 1.00 1.00 O ATOM 300 CB GLN 38 0.898 -15.717 2.861 1.00 1.00 C ATOM 301 CG GLN 38 0.668 -15.580 4.357 1.00 1.00 C ATOM 302 CD GLN 38 -0.457 -14.620 4.688 1.00 1.00 C ATOM 303 OE1 GLN 38 -1.091 -14.059 3.794 1.00 1.00 O ATOM 304 NE2 GLN 38 -0.710 -14.427 5.977 1.00 1.00 N ATOM 305 N ASN 39 3.273 -16.552 0.372 1.00 1.00 N ATOM 306 CA ASN 39 3.426 -16.662 -1.064 1.00 1.00 C ATOM 307 C ASN 39 2.740 -15.507 -1.779 1.00 1.00 C ATOM 308 O ASN 39 2.368 -15.626 -2.944 1.00 1.00 O ATOM 309 CB ASN 39 2.809 -17.968 -1.570 1.00 1.00 C ATOM 310 CG ASN 39 3.579 -19.191 -1.113 1.00 1.00 C ATOM 311 OD1 ASN 39 4.791 -19.130 -0.900 1.00 1.00 O ATOM 312 ND2 ASN 39 2.877 -20.308 -0.960 1.00 1.00 N ATOM 313 N GLU 40 2.573 -14.384 -1.076 1.00 1.00 N ATOM 314 CA GLU 40 1.934 -13.214 -1.643 1.00 1.00 C ATOM 315 C GLU 40 2.809 -12.575 -2.712 1.00 1.00 C ATOM 316 O GLU 40 2.314 -12.158 -3.756 1.00 1.00 O ATOM 317 CB GLU 40 1.671 -12.169 -0.557 1.00 1.00 C ATOM 318 CG GLU 40 0.961 -10.920 -1.056 1.00 1.00 C ATOM 319 CD GLU 40 -0.453 -11.202 -1.525 1.00 1.00 C ATOM 320 OE1 GLU 40 -0.949 -12.321 -1.274 1.00 1.00 O ATOM 321 OE2 GLU 40 -1.065 -10.305 -2.141 1.00 1.00 O ATOM 322 N PHE 41 4.116 -12.500 -2.449 1.00 1.00 N ATOM 323 CA PHE 41 5.054 -11.914 -3.384 1.00 1.00 C ATOM 324 C PHE 41 5.023 -12.644 -4.720 1.00 1.00 C ATOM 325 O PHE 41 5.050 -12.016 -5.775 1.00 1.00 O ATOM 326 CB PHE 41 6.479 -11.990 -2.833 1.00 1.00 C ATOM 327 CG PHE 41 6.720 -11.095 -1.652 1.00 1.00 C ATOM 328 CD1 PHE 41 5.834 -10.076 -1.345 1.00 1.00 C ATOM 329 CD2 PHE 41 7.832 -11.270 -0.847 1.00 1.00 C ATOM 330 CE1 PHE 41 6.057 -9.252 -0.258 1.00 1.00 C ATOM 331 CE2 PHE 41 8.055 -10.445 0.239 1.00 1.00 C ATOM 332 CZ PHE 41 7.173 -9.439 0.536 1.00 1.00 C ATOM 333 N SER 42 4.966 -13.978 -4.670 1.00 1.00 N ATOM 334 CA SER 42 4.933 -14.788 -5.872 1.00 1.00 C ATOM 335 C SER 42 3.742 -14.421 -6.747 1.00 1.00 C ATOM 336 O SER 42 3.864 -14.350 -7.967 1.00 1.00 O ATOM 337 CB SER 42 4.822 -16.271 -5.515 1.00 1.00 C ATOM 338 OG SER 42 5.988 -16.724 -4.848 1.00 1.00 O ATOM 339 N GLY 43 2.588 -14.188 -6.118 1.00 1.00 N ATOM 340 CA GLY 43 1.382 -13.830 -6.837 1.00 1.00 C ATOM 341 C GLY 43 1.516 -12.438 -7.439 1.00 1.00 C ATOM 342 O GLY 43 1.081 -12.201 -8.563 1.00 1.00 O ATOM 343 N TRP 44 2.122 -11.517 -6.685 1.00 1.00 N ATOM 344 CA TRP 44 2.311 -10.156 -7.145 1.00 1.00 C ATOM 345 C TRP 44 3.212 -10.112 -8.370 1.00 1.00 C ATOM 346 O TRP 44 2.914 -9.419 -9.339 1.00 1.00 O ATOM 347 CB TRP 44 2.957 -9.306 -6.049 1.00 1.00 C ATOM 348 CG TRP 44 2.019 -8.947 -4.938 1.00 1.00 C ATOM 349 CD1 TRP 44 2.034 -9.433 -3.662 1.00 1.00 C ATOM 350 CD2 TRP 44 0.924 -8.023 -5.003 1.00 1.00 C ATOM 351 NE1 TRP 44 1.019 -8.870 -2.927 1.00 1.00 N ATOM 352 CE2 TRP 44 0.323 -8.001 -3.729 1.00 1.00 C ATOM 353 CE3 TRP 44 0.395 -7.215 -6.012 1.00 1.00 C ATOM 354 CZ2 TRP 44 -0.782 -7.202 -3.439 1.00 1.00 C ATOM 355 CZ3 TRP 44 -0.700 -6.424 -5.720 1.00 1.00 C ATOM 356 CH2 TRP 44 -1.279 -6.421 -4.447 1.00 1.00 H ATOM 357 N GLU 45 4.321 -10.856 -8.324 1.00 1.00 N ATOM 358 CA GLU 45 5.260 -10.899 -9.427 1.00 1.00 C ATOM 359 C GLU 45 4.576 -11.342 -10.712 1.00 1.00 C ATOM 360 O GLU 45 4.883 -10.834 -11.789 1.00 1.00 O ATOM 361 CB GLU 45 6.393 -11.883 -9.128 1.00 1.00 C ATOM 362 CG GLU 45 7.353 -11.413 -8.046 1.00 1.00 C ATOM 363 CD GLU 45 8.387 -12.463 -7.690 1.00 1.00 C ATOM 364 OE1 GLU 45 8.308 -13.584 -8.236 1.00 1.00 O ATOM 365 OE2 GLU 45 9.277 -12.164 -6.867 1.00 1.00 O ATOM 366 N SER 46 3.647 -12.293 -10.597 1.00 1.00 N ATOM 367 CA SER 46 2.924 -12.801 -11.746 1.00 1.00 C ATOM 368 C SER 46 2.164 -11.686 -12.452 1.00 1.00 C ATOM 369 O SER 46 2.369 -11.447 -13.639 1.00 1.00 O ATOM 370 CB SER 46 1.914 -13.867 -11.316 1.00 1.00 C ATOM 371 OG SER 46 2.571 -15.020 -10.819 1.00 1.00 O ATOM 372 N LYS 47 1.285 -11.003 -11.716 1.00 1.00 N ATOM 373 CA LYS 47 0.499 -9.920 -12.270 1.00 1.00 C ATOM 374 C LYS 47 1.388 -8.906 -12.980 1.00 1.00 C ATOM 375 O LYS 47 1.174 -8.603 -14.151 1.00 1.00 O ATOM 376 CB LYS 47 -0.263 -9.190 -11.163 1.00 1.00 C ATOM 377 CG LYS 47 -1.367 -10.016 -10.522 1.00 1.00 C ATOM 378 CD LYS 47 -2.475 -10.323 -11.515 1.00 1.00 C ATOM 379 CE LYS 47 -3.613 -11.087 -10.855 1.00 1.00 C ATOM 380 NZ LYS 47 -4.604 -11.577 -11.851 1.00 1.00 N ATOM 381 N LEU 48 2.387 -8.384 -12.266 1.00 1.00 N ATOM 382 CA LEU 48 3.301 -7.410 -12.826 1.00 1.00 C ATOM 383 C LEU 48 3.998 -7.962 -14.063 1.00 1.00 C ATOM 384 O LEU 48 4.091 -7.280 -15.082 1.00 1.00 O ATOM 385 CB LEU 48 4.375 -7.033 -11.803 1.00 1.00 C ATOM 386 CG LEU 48 3.908 -6.203 -10.606 1.00 1.00 C ATOM 387 CD1 LEU 48 5.023 -6.063 -9.580 1.00 1.00 C ATOM 388 CD2 LEU 48 3.491 -4.808 -11.048 1.00 1.00 C ATOM 389 N GLY 49 4.489 -9.199 -13.970 1.00 1.00 N ATOM 390 CA GLY 49 5.173 -9.836 -15.078 1.00 1.00 C ATOM 391 C GLY 49 4.271 -9.882 -16.303 1.00 1.00 C ATOM 392 O GLY 49 4.731 -9.675 -17.424 1.00 1.00 O ATOM 393 N ASN 50 2.983 -10.156 -16.087 1.00 1.00 N ATOM 394 CA ASN 50 2.023 -10.227 -17.170 1.00 1.00 C ATOM 395 C ASN 50 1.934 -8.901 -17.913 1.00 1.00 C ATOM 396 O ASN 50 1.784 -8.878 -19.132 1.00 1.00 O ATOM 397 CB ASN 50 0.631 -10.565 -16.632 1.00 1.00 C ATOM 398 CG ASN 50 0.512 -12.010 -16.188 1.00 1.00 C ATOM 399 OD1 ASN 50 1.305 -12.860 -16.594 1.00 1.00 O ATOM 400 ND2 ASN 50 -0.480 -12.291 -15.353 1.00 1.00 N ATOM 401 N GLY 51 2.026 -7.795 -17.172 1.00 1.00 N ATOM 402 CA GLY 51 1.956 -6.472 -17.760 1.00 1.00 C ATOM 403 C GLY 51 0.511 -6.007 -17.850 1.00 1.00 C ATOM 404 O GLY 51 0.200 -5.073 -18.585 1.00 1.00 O ATOM 405 N GLU 52 -0.376 -6.664 -17.099 1.00 1.00 N ATOM 406 CA GLU 52 -1.783 -6.317 -17.096 1.00 1.00 C ATOM 407 C GLU 52 -2.088 -5.272 -16.032 1.00 1.00 C ATOM 408 O GLU 52 -2.733 -4.264 -16.314 1.00 1.00 O ATOM 409 CB GLU 52 -2.639 -7.552 -16.808 1.00 1.00 C ATOM 410 CG GLU 52 -2.575 -8.617 -17.890 1.00 1.00 C ATOM 411 CD GLU 52 -3.436 -9.824 -17.572 1.00 1.00 C ATOM 412 OE1 GLU 52 -4.096 -9.820 -16.511 1.00 1.00 O ATOM 413 OE2 GLU 52 -3.451 -10.774 -18.384 1.00 1.00 O ATOM 414 N ILE 53 -1.621 -5.514 -14.804 1.00 1.00 N ATOM 415 CA ILE 53 -1.844 -4.597 -13.706 1.00 1.00 C ATOM 416 C ILE 53 -0.692 -3.612 -13.571 1.00 1.00 C ATOM 417 O ILE 53 0.471 -3.995 -13.671 1.00 1.00 O ATOM 418 CB ILE 53 -1.977 -5.344 -12.365 1.00 1.00 C ATOM 419 CG1 ILE 53 -3.137 -6.339 -12.421 1.00 1.00 C ATOM 420 CG2 ILE 53 -2.237 -4.362 -11.233 1.00 1.00 C ATOM 421 CD1 ILE 53 -4.477 -5.698 -12.716 1.00 1.00 C ATOM 422 N THR 54 -1.019 -2.337 -13.345 1.00 1.00 N ATOM 423 CA THR 54 -0.014 -1.304 -13.200 1.00 1.00 C ATOM 424 C THR 54 0.544 -1.278 -11.783 1.00 1.00 C ATOM 425 O THR 54 -0.033 -1.872 -10.875 1.00 1.00 O ATOM 426 CB THR 54 -0.593 0.092 -13.497 1.00 1.00 C ATOM 427 OG1 THR 54 -1.622 0.398 -12.549 1.00 1.00 O ATOM 428 CG2 THR 54 -1.185 0.135 -14.898 1.00 1.00 C ATOM 429 N VAL 55 1.672 -0.588 -11.597 1.00 1.00 N ATOM 430 CA VAL 55 2.303 -0.488 -10.296 1.00 1.00 C ATOM 431 C VAL 55 1.392 0.216 -9.300 1.00 1.00 C ATOM 432 O VAL 55 1.438 -0.068 -8.105 1.00 1.00 O ATOM 433 CB VAL 55 3.619 0.309 -10.368 1.00 1.00 C ATOM 434 CG1 VAL 55 3.338 1.779 -10.637 1.00 1.00 C ATOM 435 CG2 VAL 55 4.381 0.197 -9.055 1.00 1.00 C ATOM 436 N LYS 56 0.564 1.138 -9.794 1.00 1.00 N ATOM 437 CA LYS 56 -0.352 1.878 -8.949 1.00 1.00 C ATOM 438 C LYS 56 -1.412 0.961 -8.355 1.00 1.00 C ATOM 439 O LYS 56 -1.782 1.105 -7.192 1.00 1.00 O ATOM 440 CB LYS 56 -1.064 2.967 -9.753 1.00 1.00 C ATOM 441 CG LYS 56 -0.164 4.119 -10.169 1.00 1.00 C ATOM 442 CD LYS 56 -0.934 5.165 -10.959 1.00 1.00 C ATOM 443 CE LYS 56 -0.026 6.300 -11.403 1.00 1.00 C ATOM 444 NZ LYS 56 -0.762 7.320 -12.199 1.00 1.00 N ATOM 445 N GLU 57 -1.902 0.014 -9.160 1.00 1.00 N ATOM 446 CA GLU 57 -2.915 -0.921 -8.713 1.00 1.00 C ATOM 447 C GLU 57 -2.327 -1.953 -7.761 1.00 1.00 C ATOM 448 O GLU 57 -3.009 -2.424 -6.854 1.00 1.00 O ATOM 449 CB GLU 57 -3.521 -1.665 -9.905 1.00 1.00 C ATOM 450 CG GLU 57 -4.392 -0.796 -10.799 1.00 1.00 C ATOM 451 CD GLU 57 -4.901 -1.543 -12.017 1.00 1.00 C ATOM 452 OE1 GLU 57 -4.521 -2.719 -12.194 1.00 1.00 O ATOM 453 OE2 GLU 57 -5.679 -0.950 -12.794 1.00 1.00 O ATOM 454 N PHE 58 -1.056 -2.304 -7.970 1.00 1.00 N ATOM 455 CA PHE 58 -0.383 -3.275 -7.133 1.00 1.00 C ATOM 456 C PHE 58 0.170 -2.624 -5.873 1.00 1.00 C ATOM 457 O PHE 58 0.121 -3.211 -4.795 1.00 1.00 O ATOM 458 CB PHE 58 0.783 -3.916 -7.888 1.00 1.00 C ATOM 459 CG PHE 58 0.356 -4.868 -8.969 1.00 1.00 C ATOM 460 CD1 PHE 58 0.372 -4.480 -10.297 1.00 1.00 C ATOM 461 CD2 PHE 58 -0.063 -6.150 -8.657 1.00 1.00 C ATOM 462 CE1 PHE 58 -0.022 -5.356 -11.292 1.00 1.00 C ATOM 463 CE2 PHE 58 -0.456 -7.025 -9.652 1.00 1.00 C ATOM 464 CZ PHE 58 -0.437 -6.633 -10.965 1.00 1.00 C ATOM 465 N ILE 59 0.699 -1.406 -6.012 1.00 1.00 N ATOM 466 CA ILE 59 1.257 -0.680 -4.889 1.00 1.00 C ATOM 467 C ILE 59 0.177 -0.318 -3.880 1.00 1.00 C ATOM 468 O ILE 59 0.361 -0.495 -2.678 1.00 1.00 O ATOM 469 CB ILE 59 1.929 0.629 -5.341 1.00 1.00 C ATOM 470 CG1 ILE 59 3.110 0.331 -6.267 1.00 1.00 C ATOM 471 CG2 ILE 59 2.444 1.406 -4.139 1.00 1.00 C ATOM 472 CD1 ILE 59 4.202 -0.491 -5.619 1.00 1.00 C ATOM 473 N GLU 60 -0.954 0.193 -4.372 1.00 1.00 N ATOM 474 CA GLU 60 -2.057 0.579 -3.515 1.00 1.00 C ATOM 475 C GLU 60 -2.570 -0.610 -2.715 1.00 1.00 C ATOM 476 O GLU 60 -2.963 -0.462 -1.560 1.00 1.00 O ATOM 477 CB GLU 60 -3.217 1.128 -4.349 1.00 1.00 C ATOM 478 CG GLU 60 -4.397 1.617 -3.525 1.00 1.00 C ATOM 479 CD GLU 60 -5.500 2.207 -4.380 1.00 1.00 C ATOM 480 OE1 GLU 60 -5.334 2.251 -5.618 1.00 1.00 O ATOM 481 OE2 GLU 60 -6.532 2.626 -3.814 1.00 1.00 O ATOM 482 N GLY 61 -2.568 -1.793 -3.335 1.00 1.00 N ATOM 483 CA GLY 61 -3.033 -3.000 -2.681 1.00 1.00 C ATOM 484 C GLY 61 -2.113 -3.366 -1.525 1.00 1.00 C ATOM 485 O GLY 61 -2.575 -3.799 -0.472 1.00 1.00 O ATOM 486 N LEU 62 -0.804 -3.189 -1.724 1.00 1.00 N ATOM 487 CA LEU 62 0.174 -3.498 -0.701 1.00 1.00 C ATOM 488 C LEU 62 -0.030 -2.632 0.533 1.00 1.00 C ATOM 489 O LEU 62 0.078 -3.114 1.659 1.00 1.00 O ATOM 490 CB LEU 62 1.591 -3.255 -1.223 1.00 1.00 C ATOM 491 CG LEU 62 2.092 -4.221 -2.299 1.00 1.00 C ATOM 492 CD1 LEU 62 3.430 -3.760 -2.854 1.00 1.00 C ATOM 493 CD2 LEU 62 2.272 -5.618 -1.725 1.00 1.00 C ATOM 494 N GLY 63 -0.326 -1.347 0.321 1.00 1.00 N ATOM 495 CA GLY 63 -0.544 -0.421 1.412 1.00 1.00 C ATOM 496 C GLY 63 0.684 0.456 1.616 1.00 1.00 C ATOM 497 O GLY 63 1.034 0.785 2.747 1.00 1.00 O ATOM 498 N TYR 64 1.337 0.835 0.516 1.00 1.00 N ATOM 499 CA TYR 64 2.520 1.670 0.577 1.00 1.00 C ATOM 500 C TYR 64 2.164 3.138 0.392 1.00 1.00 C ATOM 501 O TYR 64 1.455 3.495 -0.546 1.00 1.00 O ATOM 502 CB TYR 64 3.510 1.279 -0.522 1.00 1.00 C ATOM 503 CG TYR 64 4.772 2.111 -0.536 1.00 1.00 C ATOM 504 CD1 TYR 64 5.779 1.894 0.397 1.00 1.00 C ATOM 505 CD2 TYR 64 4.952 3.112 -1.481 1.00 1.00 C ATOM 506 CE1 TYR 64 6.934 2.651 0.392 1.00 1.00 C ATOM 507 CE2 TYR 64 6.102 3.879 -1.502 1.00 1.00 C ATOM 508 CZ TYR 64 7.096 3.640 -0.555 1.00 1.00 C ATOM 509 OH TYR 64 8.246 4.395 -0.561 1.00 1.00 H ATOM 510 N SER 65 2.659 3.991 1.291 1.00 1.00 N ATOM 511 CA SER 65 2.394 5.414 1.225 1.00 1.00 C ATOM 512 C SER 65 3.084 6.045 0.023 1.00 1.00 C ATOM 513 O SER 65 4.057 5.502 -0.493 1.00 1.00 O ATOM 514 CB SER 65 2.904 6.113 2.487 1.00 1.00 C ATOM 515 OG SER 65 2.228 5.643 3.639 1.00 1.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 498 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 52.30 78.2 124 100.0 124 ARMSMC SECONDARY STRUCTURE . . 33.86 90.2 82 100.0 82 ARMSMC SURFACE . . . . . . . . 54.93 74.4 90 100.0 90 ARMSMC BURIED . . . . . . . . 44.60 88.2 34 100.0 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.09 40.0 50 100.0 50 ARMSSC1 RELIABLE SIDE CHAINS . 90.42 38.3 47 100.0 47 ARMSSC1 SECONDARY STRUCTURE . . 89.06 40.6 32 100.0 32 ARMSSC1 SURFACE . . . . . . . . 86.51 43.6 39 100.0 39 ARMSSC1 BURIED . . . . . . . . 97.70 27.3 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.10 41.5 41 100.0 41 ARMSSC2 RELIABLE SIDE CHAINS . 85.52 36.1 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 83.94 44.4 27 100.0 27 ARMSSC2 SURFACE . . . . . . . . 85.40 40.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 72.35 45.5 11 100.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.88 41.2 17 100.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 70.52 46.7 15 100.0 15 ARMSSC3 SECONDARY STRUCTURE . . 91.30 36.4 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 84.58 43.8 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 71.76 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 81.13 33.3 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 81.13 33.3 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 77.73 40.0 5 100.0 5 ARMSSC4 SURFACE . . . . . . . . 81.13 33.3 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.09 (Number of atoms: 63) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.09 63 100.0 63 CRMSCA CRN = ALL/NP . . . . . 0.0807 CRMSCA SECONDARY STRUCTURE . . 4.14 41 100.0 41 CRMSCA SURFACE . . . . . . . . 5.61 46 100.0 46 CRMSCA BURIED . . . . . . . . 3.25 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.16 309 100.0 309 CRMSMC SECONDARY STRUCTURE . . 4.23 201 100.0 201 CRMSMC SURFACE . . . . . . . . 5.68 226 100.0 226 CRMSMC BURIED . . . . . . . . 3.38 83 100.0 83 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 7.12 246 32.8 750 CRMSSC RELIABLE SIDE CHAINS . 7.13 226 31.0 730 CRMSSC SECONDARY STRUCTURE . . 6.52 158 32.6 484 CRMSSC SURFACE . . . . . . . . 7.89 184 33.2 554 CRMSSC BURIED . . . . . . . . 4.10 62 31.6 196 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 6.14 498 49.7 1002 CRMSALL SECONDARY STRUCTURE . . 5.40 322 49.7 648 CRMSALL SURFACE . . . . . . . . 6.80 368 49.9 738 CRMSALL BURIED . . . . . . . . 3.69 130 49.2 264 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.273 0.522 0.261 63 100.0 63 ERRCA SECONDARY STRUCTURE . . 2.553 0.476 0.238 41 100.0 41 ERRCA SURFACE . . . . . . . . 3.742 0.548 0.274 46 100.0 46 ERRCA BURIED . . . . . . . . 2.003 0.453 0.226 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.314 0.524 0.262 309 100.0 309 ERRMC SECONDARY STRUCTURE . . 2.609 0.480 0.240 201 100.0 201 ERRMC SURFACE . . . . . . . . 3.765 0.548 0.274 226 100.0 226 ERRMC BURIED . . . . . . . . 2.085 0.460 0.230 83 100.0 83 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.928 0.610 0.305 246 32.8 750 ERRSC RELIABLE SIDE CHAINS . 4.934 0.611 0.305 226 31.0 730 ERRSC SECONDARY STRUCTURE . . 4.342 0.583 0.291 158 32.6 484 ERRSC SURFACE . . . . . . . . 5.689 0.645 0.322 184 33.2 554 ERRSC BURIED . . . . . . . . 2.669 0.507 0.253 62 31.6 196 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.052 0.565 0.282 498 49.7 1002 ERRALL SECONDARY STRUCTURE . . 3.398 0.528 0.264 322 49.7 648 ERRALL SURFACE . . . . . . . . 4.661 0.594 0.297 368 49.9 738 ERRALL BURIED . . . . . . . . 2.327 0.481 0.240 130 49.2 264 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 14 28 43 59 63 63 DISTCA CA (P) 0.00 22.22 44.44 68.25 93.65 63 DISTCA CA (RMS) 0.00 1.58 2.15 2.92 4.36 DISTCA ALL (N) 4 83 171 308 440 498 1002 DISTALL ALL (P) 0.40 8.28 17.07 30.74 43.91 1002 DISTALL ALL (RMS) 0.88 1.55 2.09 3.09 4.55 DISTALL END of the results output