####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 63 ( 498), selected 63 , name T0553TS110_1-D1 # Molecule2: number of CA atoms 63 ( 1002), selected 63 , name T0553-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0553TS110_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 63 3 - 65 3.87 3.87 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 36 - 65 1.95 6.30 LCS_AVERAGE: 38.73 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 12 - 27 0.98 4.68 LCS_AVERAGE: 16.91 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 63 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 3 V 3 3 4 63 3 3 4 8 12 22 35 39 44 48 56 60 61 63 63 63 63 63 63 63 LCS_GDT F 4 F 4 3 4 63 3 3 4 4 19 31 35 40 45 51 56 60 61 63 63 63 63 63 63 63 LCS_GDT K 5 K 5 3 4 63 3 3 20 24 32 33 38 46 49 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT R 6 R 6 3 6 63 1 3 4 6 20 23 31 39 48 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT V 7 V 7 4 11 63 4 4 5 6 11 14 22 36 43 48 56 60 61 63 63 63 63 63 63 63 LCS_GDT A 8 A 8 4 23 63 4 4 5 8 11 17 22 36 40 45 47 54 60 63 63 63 63 63 63 63 LCS_GDT G 9 G 9 4 23 63 4 4 8 14 20 33 35 38 42 47 52 58 61 63 63 63 63 63 63 63 LCS_GDT I 10 I 10 4 23 63 4 13 20 24 32 33 37 43 49 51 56 60 61 63 63 63 63 63 63 63 LCS_GDT K 11 K 11 4 23 63 3 3 4 5 11 28 37 43 49 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT D 12 D 12 16 23 63 11 14 18 24 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT K 13 K 13 16 23 63 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT A 14 A 14 16 23 63 11 14 20 24 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT A 15 A 15 16 23 63 11 14 20 24 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT I 16 I 16 16 23 63 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT K 17 K 17 16 23 63 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT T 18 T 18 16 23 63 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT L 19 L 19 16 23 63 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT I 20 I 20 16 23 63 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT S 21 S 21 16 23 63 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT A 22 A 22 16 23 63 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT A 23 A 23 16 23 63 8 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT Y 24 Y 24 16 23 63 3 10 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT R 25 R 25 16 23 63 3 8 18 24 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT Q 26 Q 26 16 23 63 3 12 20 24 32 33 37 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT I 27 I 27 16 23 63 3 13 20 24 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT F 28 F 28 12 23 63 3 8 20 24 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT E 29 E 29 12 23 63 3 8 20 24 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT R 30 R 30 10 23 63 3 13 20 24 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT D 31 D 31 3 23 63 3 3 4 5 9 18 35 39 47 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT I 32 I 32 3 23 63 3 3 7 13 24 31 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT A 33 A 33 4 11 63 3 3 14 19 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT P 34 P 34 6 11 63 3 5 8 10 12 23 30 36 47 51 56 60 61 63 63 63 63 63 63 63 LCS_GDT Y 35 Y 35 6 11 63 3 5 14 19 22 31 37 45 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT I 36 I 36 6 30 63 3 5 8 14 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT A 37 A 37 6 30 63 3 14 18 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT Q 38 Q 38 6 30 63 4 5 17 23 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT N 39 N 39 6 30 63 4 10 18 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT E 40 E 40 6 30 63 4 5 18 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT F 41 F 41 11 30 63 5 9 13 19 32 33 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT S 42 S 42 11 30 63 6 13 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT G 43 G 43 11 30 63 5 14 18 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT W 44 W 44 11 30 63 5 13 14 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT E 45 E 45 11 30 63 5 9 17 22 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT S 46 S 46 11 30 63 4 9 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT K 47 K 47 11 30 63 4 12 18 23 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT L 48 L 48 11 30 63 4 9 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT G 49 G 49 11 30 63 3 6 14 19 25 29 37 43 48 51 56 60 61 63 63 63 63 63 63 63 LCS_GDT N 50 N 50 11 30 63 4 9 13 18 24 29 31 40 47 51 56 59 61 63 63 63 63 63 63 63 LCS_GDT G 51 G 51 11 30 63 3 9 17 22 27 35 39 46 50 51 56 60 61 63 63 63 63 63 63 63 LCS_GDT E 52 E 52 7 30 63 4 10 17 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT I 53 I 53 13 30 63 3 7 13 17 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT T 54 T 54 13 30 63 9 13 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT V 55 V 55 13 30 63 9 13 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT K 56 K 56 13 30 63 9 13 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT E 57 E 57 13 30 63 9 13 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT F 58 F 58 13 30 63 9 13 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT I 59 I 59 13 30 63 9 13 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT E 60 E 60 13 30 63 9 13 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT G 61 G 61 13 30 63 9 13 17 22 27 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT L 62 L 62 13 30 63 9 13 17 22 27 35 39 45 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT G 63 G 63 13 30 63 4 13 17 22 27 33 39 44 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT Y 64 Y 64 13 30 63 4 13 17 22 27 33 39 45 50 52 56 60 61 63 63 63 63 63 63 63 LCS_GDT S 65 S 65 13 30 63 3 13 17 22 26 31 39 43 50 52 56 60 61 63 63 63 63 63 63 63 LCS_AVERAGE LCS_A: 51.88 ( 16.91 38.73 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 14 20 24 32 35 39 46 50 52 56 60 61 63 63 63 63 63 63 63 GDT PERCENT_AT 17.46 22.22 31.75 38.10 50.79 55.56 61.90 73.02 79.37 82.54 88.89 95.24 96.83 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.27 0.52 1.05 1.20 1.62 2.22 2.36 2.74 2.94 3.15 3.34 3.60 3.67 3.87 3.87 3.87 3.87 3.87 3.87 3.87 GDT RMS_ALL_AT 5.14 4.60 4.63 4.60 4.45 4.40 4.65 3.97 4.15 3.97 3.95 3.89 3.89 3.87 3.87 3.87 3.87 3.87 3.87 3.87 # Checking swapping # possible swapping detected: D 12 D 12 # possible swapping detected: F 28 F 28 # possible swapping detected: Y 35 Y 35 # possible swapping detected: E 40 E 40 # possible swapping detected: E 57 E 57 # possible swapping detected: E 60 E 60 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 3 V 3 6.559 0 0.576 0.936 10.423 13.095 8.844 LGA F 4 F 4 5.844 0 0.606 1.294 13.617 31.429 12.814 LGA K 5 K 5 3.908 0 0.660 0.728 8.840 35.833 24.392 LGA R 6 R 6 6.194 0 0.586 1.109 19.853 25.238 9.610 LGA V 7 V 7 6.556 0 0.691 0.690 9.619 16.310 11.088 LGA A 8 A 8 8.931 0 0.538 0.573 10.232 2.976 2.381 LGA G 9 G 9 7.955 0 0.315 0.315 8.060 9.643 9.643 LGA I 10 I 10 4.797 0 0.392 0.922 5.950 36.786 45.179 LGA K 11 K 11 5.155 0 0.725 0.544 12.422 27.738 13.968 LGA D 12 D 12 3.429 0 0.058 1.398 6.763 65.595 45.833 LGA K 13 K 13 2.407 0 0.209 0.878 4.569 61.071 55.344 LGA A 14 A 14 2.701 0 0.085 0.107 2.935 59.048 58.667 LGA A 15 A 15 3.014 0 0.038 0.039 3.491 53.571 52.857 LGA I 16 I 16 2.393 0 0.060 0.137 3.037 68.810 62.083 LGA K 17 K 17 1.038 0 0.166 0.696 4.225 81.429 69.471 LGA T 18 T 18 1.625 0 0.100 0.166 2.753 79.286 71.973 LGA L 19 L 19 1.904 0 0.069 0.865 4.903 72.857 63.690 LGA I 20 I 20 1.261 0 0.080 0.096 1.701 81.429 79.286 LGA S 21 S 21 0.610 0 0.073 0.097 0.701 90.476 90.476 LGA A 22 A 22 0.827 0 0.024 0.079 1.090 85.952 86.857 LGA A 23 A 23 1.431 0 0.060 0.057 1.705 81.429 79.714 LGA Y 24 Y 24 0.657 0 0.100 0.219 4.693 82.024 66.190 LGA R 25 R 25 2.840 0 0.188 0.672 4.570 52.857 68.052 LGA Q 26 Q 26 3.922 0 0.063 1.318 4.765 42.024 43.016 LGA I 27 I 27 3.011 0 0.121 0.676 4.309 50.119 53.036 LGA F 28 F 28 3.199 0 0.426 1.082 5.362 44.167 56.364 LGA E 29 E 29 3.635 0 0.477 1.173 3.900 46.667 53.651 LGA R 30 R 30 2.995 0 0.648 1.122 9.710 40.357 24.848 LGA D 31 D 31 6.230 0 0.608 1.295 11.554 24.405 12.560 LGA I 32 I 32 3.728 0 0.476 1.250 4.830 40.238 48.512 LGA A 33 A 33 3.184 0 0.604 0.566 4.119 59.643 55.143 LGA P 34 P 34 6.394 0 0.587 1.085 9.906 15.357 9.728 LGA Y 35 Y 35 5.625 0 0.293 1.230 7.163 33.690 27.579 LGA I 36 I 36 3.634 0 0.109 0.212 7.488 50.595 36.548 LGA A 37 A 37 1.821 0 0.095 0.117 3.141 65.119 63.524 LGA Q 38 Q 38 2.329 0 0.114 0.902 5.718 68.810 56.878 LGA N 39 N 39 1.296 0 0.026 0.371 2.279 75.119 81.667 LGA E 40 E 40 1.650 0 0.086 1.135 5.805 69.048 50.582 LGA F 41 F 41 2.894 0 0.383 1.273 10.681 69.048 32.727 LGA S 42 S 42 0.442 0 0.060 0.625 2.057 88.333 86.349 LGA G 43 G 43 2.239 0 0.055 0.055 2.473 68.929 68.929 LGA W 44 W 44 2.160 0 0.073 1.047 6.528 75.119 42.449 LGA E 45 E 45 1.921 0 0.128 1.233 3.548 67.262 61.005 LGA S 46 S 46 3.523 0 0.146 0.584 4.138 47.143 44.841 LGA K 47 K 47 3.200 0 0.160 1.390 8.199 50.000 38.836 LGA L 48 L 48 3.031 0 0.165 0.245 4.345 46.905 46.071 LGA G 49 G 49 5.536 0 0.109 0.109 6.780 22.262 22.262 LGA N 50 N 50 6.477 0 0.109 1.121 9.078 20.476 13.810 LGA G 51 G 51 3.822 0 0.226 0.226 4.154 54.524 54.524 LGA E 52 E 52 0.994 0 0.369 1.085 6.876 75.238 51.534 LGA I 53 I 53 2.252 0 0.414 0.713 4.988 68.810 55.476 LGA T 54 T 54 2.921 0 0.638 0.827 5.257 49.524 45.170 LGA V 55 V 55 3.103 0 0.146 0.308 3.862 51.786 51.088 LGA K 56 K 56 3.938 0 0.102 0.746 6.235 45.000 37.143 LGA E 57 E 57 2.780 0 0.098 0.889 4.292 55.357 53.386 LGA F 58 F 58 2.625 0 0.057 0.256 3.802 53.571 52.035 LGA I 59 I 59 3.964 0 0.092 0.176 4.978 41.786 37.321 LGA E 60 E 60 3.746 0 0.090 0.602 5.457 43.333 36.296 LGA G 61 G 61 3.284 0 0.153 0.153 4.346 45.119 45.119 LGA L 62 L 62 4.354 0 0.067 1.379 6.731 34.524 35.357 LGA G 63 G 63 5.727 0 0.185 0.185 5.929 22.619 22.619 LGA Y 64 Y 64 5.448 0 0.161 1.213 6.695 21.786 37.619 LGA S 65 S 65 5.705 0 0.613 0.788 6.896 20.595 23.333 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 63 252 252 100.00 498 498 100.00 63 SUMMARY(RMSD_GDC): 3.866 3.854 4.857 50.465 45.355 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 63 63 4.0 46 2.74 58.333 57.085 1.618 LGA_LOCAL RMSD: 2.743 Number of atoms: 46 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.974 Number of assigned atoms: 63 Std_ASGN_ATOMS RMSD: 3.866 Standard rmsd on all 63 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.091407 * X + -0.983390 * Y + 0.156809 * Z + -13.987699 Y_new = 0.000474 * X + -0.157425 * Y + -0.987531 * Z + -87.608704 Z_new = 0.995813 * X + 0.090342 * Y + -0.013924 * Z + -13.334058 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.005187 -1.479260 1.723714 [DEG: 0.2972 -84.7554 98.7615 ] ZXZ: 0.157474 1.584720 1.480323 [DEG: 9.0226 90.7978 84.8162 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0553TS110_1-D1 REMARK 2: T0553-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0553TS110_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 63 63 4.0 46 2.74 57.085 3.87 REMARK ---------------------------------------------------------- MOLECULE T0553TS110_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0553 REMARK MODEL 1 REMARK PARENT N/A ATOM 18 N VAL 3 8.956 4.641 -4.019 1.00 0.00 N ATOM 19 CA VAL 3 9.617 3.668 -4.803 1.00 0.00 C ATOM 20 CB VAL 3 10.298 2.676 -3.866 1.00 0.00 C ATOM 21 C VAL 3 8.724 3.025 -6.011 1.00 0.00 C ATOM 22 O VAL 3 9.144 2.297 -6.915 1.00 0.00 O ATOM 23 CG1 VAL 3 11.358 3.316 -2.968 1.00 0.00 C ATOM 24 CG2 VAL 3 9.330 1.978 -2.909 1.00 0.00 C ATOM 25 N PHE 4 7.446 3.344 -5.873 1.00 0.00 N ATOM 26 CA PHE 4 6.604 2.934 -7.008 1.00 0.00 C ATOM 27 CB PHE 4 5.138 3.254 -6.687 1.00 0.00 C ATOM 28 C PHE 4 6.856 3.587 -8.379 1.00 0.00 C ATOM 29 O PHE 4 6.631 3.103 -9.501 1.00 0.00 O ATOM 30 CG PHE 4 4.969 4.730 -6.789 1.00 0.00 C ATOM 31 CD1 PHE 4 4.597 5.360 -7.999 1.00 0.00 C ATOM 32 CD2 PHE 4 5.180 5.541 -5.659 1.00 0.00 C ATOM 33 CE1 PHE 4 4.433 6.772 -8.087 1.00 0.00 C ATOM 34 CE2 PHE 4 5.024 6.959 -5.720 1.00 0.00 C ATOM 35 CZ PHE 4 4.650 7.576 -6.941 1.00 0.00 C ATOM 36 N LYS 5 7.318 4.822 -8.190 1.00 0.00 N ATOM 37 CA LYS 5 7.431 5.619 -9.447 1.00 0.00 C ATOM 38 CB LYS 5 7.494 7.124 -9.238 1.00 0.00 C ATOM 39 C LYS 5 8.666 5.225 -10.263 1.00 0.00 C ATOM 40 O LYS 5 8.815 5.397 -11.486 1.00 0.00 O ATOM 41 CG LYS 5 8.806 7.599 -8.611 1.00 0.00 C ATOM 42 CD LYS 5 8.877 9.114 -8.413 1.00 0.00 C ATOM 43 CE LYS 5 10.216 9.595 -7.849 1.00 0.00 C ATOM 44 NZ LYS 5 10.180 11.061 -7.642 1.00 0.00 N ATOM 45 N ARG 6 9.570 4.629 -9.489 1.00 0.00 N ATOM 46 CA ARG 6 10.890 4.242 -10.136 1.00 0.00 C ATOM 47 CB ARG 6 11.919 3.925 -9.048 1.00 0.00 C ATOM 48 C ARG 6 10.579 3.066 -11.038 1.00 0.00 C ATOM 49 O ARG 6 11.095 2.940 -12.132 1.00 0.00 O ATOM 50 CG ARG 6 12.396 5.161 -8.281 1.00 0.00 C ATOM 51 CD ARG 6 13.366 4.838 -7.142 1.00 0.00 C ATOM 52 NE ARG 6 13.735 6.126 -6.490 1.00 0.00 N ATOM 53 CZ ARG 6 14.530 6.126 -5.381 1.00 0.00 C ATOM 54 NH1 ARG 6 14.837 4.828 -5.089 1.00 0.00 N ATOM 55 NH2 ARG 6 14.708 7.423 -4.996 1.00 0.00 N ATOM 56 N VAL 7 9.729 2.186 -10.587 1.00 0.00 N ATOM 57 CA VAL 7 9.364 1.039 -11.427 1.00 0.00 C ATOM 58 CB VAL 7 8.956 -0.138 -10.499 1.00 0.00 C ATOM 59 C VAL 7 8.031 1.268 -12.199 1.00 0.00 C ATOM 60 O VAL 7 7.852 0.602 -13.211 1.00 0.00 O ATOM 61 CG1 VAL 7 8.260 -1.283 -11.237 1.00 0.00 C ATOM 62 CG2 VAL 7 10.141 -0.786 -9.780 1.00 0.00 C ATOM 63 N ALA 8 7.226 2.258 -11.837 1.00 0.00 N ATOM 64 CA ALA 8 6.187 2.720 -12.581 1.00 0.00 C ATOM 65 CB ALA 8 5.693 4.083 -12.114 1.00 0.00 C ATOM 66 C ALA 8 6.106 2.342 -14.075 1.00 0.00 C ATOM 67 O ALA 8 5.210 1.696 -14.647 1.00 0.00 O ATOM 68 N GLY 9 7.159 2.855 -14.708 1.00 0.00 N ATOM 69 CA GLY 9 7.157 2.549 -16.170 1.00 0.00 C ATOM 70 C GLY 9 7.750 1.037 -16.512 1.00 0.00 C ATOM 71 O GLY 9 8.547 0.631 -17.361 1.00 0.00 O ATOM 72 N ILE 10 6.961 0.205 -15.807 1.00 0.00 N ATOM 73 CA ILE 10 7.518 -0.956 -16.318 1.00 0.00 C ATOM 74 CB ILE 10 9.028 -0.661 -16.134 1.00 0.00 C ATOM 75 C ILE 10 7.958 -2.014 -16.598 1.00 0.00 C ATOM 76 O ILE 10 8.090 -2.151 -17.813 1.00 0.00 O ATOM 77 CG1 ILE 10 9.534 0.508 -16.994 1.00 0.00 C ATOM 78 CG2 ILE 10 9.934 -1.850 -16.498 1.00 0.00 C ATOM 79 CD1 ILE 10 10.947 0.965 -16.632 1.00 0.00 C ATOM 80 N LYS 11 8.793 -2.545 -15.716 1.00 0.00 N ATOM 81 CA LYS 11 9.629 -3.633 -16.139 1.00 0.00 C ATOM 82 CB LYS 11 10.813 -3.537 -15.164 1.00 0.00 C ATOM 83 C LYS 11 9.282 -4.887 -16.019 1.00 0.00 C ATOM 84 O LYS 11 8.429 -4.971 -15.127 1.00 0.00 O ATOM 85 CG LYS 11 11.873 -4.618 -15.382 1.00 0.00 C ATOM 86 CD LYS 11 12.804 -4.333 -16.562 1.00 0.00 C ATOM 87 CE LYS 11 13.943 -5.346 -16.702 1.00 0.00 C ATOM 88 NZ LYS 11 14.941 -4.854 -17.678 1.00 0.00 N ATOM 89 N ASP 12 9.531 -5.773 -16.961 1.00 0.00 N ATOM 90 CA ASP 12 8.805 -6.949 -16.839 1.00 0.00 C ATOM 91 CB ASP 12 9.241 -7.629 -18.149 1.00 0.00 C ATOM 92 C ASP 12 9.193 -7.948 -15.813 1.00 0.00 C ATOM 93 O ASP 12 10.319 -8.460 -15.809 1.00 0.00 O ATOM 94 CG ASP 12 8.502 -8.954 -18.261 1.00 0.00 C ATOM 95 OD1 ASP 12 7.797 -9.322 -17.282 1.00 0.00 O ATOM 96 OD2 ASP 12 8.630 -9.616 -19.325 1.00 0.00 O ATOM 97 N LYS 13 8.310 -8.135 -14.835 1.00 0.00 N ATOM 98 CA LYS 13 8.662 -8.882 -13.774 1.00 0.00 C ATOM 99 CB LYS 13 8.072 -10.312 -13.756 1.00 0.00 C ATOM 100 C LYS 13 9.788 -8.536 -12.882 1.00 0.00 C ATOM 101 O LYS 13 9.556 -8.214 -11.719 1.00 0.00 O ATOM 102 CG LYS 13 8.439 -11.108 -12.502 1.00 0.00 C ATOM 103 CD LYS 13 7.812 -12.503 -12.457 1.00 0.00 C ATOM 104 CE LYS 13 8.178 -13.298 -11.201 1.00 0.00 C ATOM 105 NZ LYS 13 7.507 -14.617 -11.226 1.00 0.00 N ATOM 106 N ALA 14 10.980 -8.397 -13.446 1.00 0.00 N ATOM 107 CA ALA 14 12.183 -7.936 -12.841 1.00 0.00 C ATOM 108 CB ALA 14 13.398 -8.249 -13.695 1.00 0.00 C ATOM 109 C ALA 14 12.178 -6.505 -12.313 1.00 0.00 C ATOM 110 O ALA 14 12.766 -6.220 -11.279 1.00 0.00 O ATOM 111 N ALA 15 11.494 -5.595 -13.004 1.00 0.00 N ATOM 112 CA ALA 15 11.355 -4.250 -12.500 1.00 0.00 C ATOM 113 CB ALA 15 11.105 -3.337 -13.692 1.00 0.00 C ATOM 114 C ALA 15 10.238 -4.182 -11.506 1.00 0.00 C ATOM 115 O ALA 15 10.294 -3.442 -10.514 1.00 0.00 O ATOM 116 N ILE 16 9.230 -5.023 -11.728 1.00 0.00 N ATOM 117 CA ILE 16 8.076 -5.071 -10.776 1.00 0.00 C ATOM 118 CB ILE 16 6.914 -5.871 -11.399 1.00 0.00 C ATOM 119 C ILE 16 8.643 -5.750 -9.533 1.00 0.00 C ATOM 120 O ILE 16 8.451 -5.193 -8.457 1.00 0.00 O ATOM 121 CG1 ILE 16 6.345 -5.231 -12.677 1.00 0.00 C ATOM 122 CG2 ILE 16 5.707 -6.032 -10.459 1.00 0.00 C ATOM 123 CD1 ILE 16 5.764 -3.836 -12.454 1.00 0.00 C ATOM 124 N LYS 17 9.379 -6.856 -9.634 1.00 0.00 N ATOM 125 CA LYS 17 10.025 -7.477 -8.592 1.00 0.00 C ATOM 126 CB LYS 17 10.785 -8.738 -8.969 1.00 0.00 C ATOM 127 C LYS 17 10.761 -6.346 -7.720 1.00 0.00 C ATOM 128 O LYS 17 10.505 -6.199 -6.530 1.00 0.00 O ATOM 129 CG LYS 17 11.424 -9.446 -7.772 1.00 0.00 C ATOM 130 CD LYS 17 12.111 -10.763 -8.134 1.00 0.00 C ATOM 131 CE LYS 17 12.833 -11.423 -6.957 1.00 0.00 C ATOM 132 NZ LYS 17 13.356 -12.747 -7.361 1.00 0.00 N ATOM 133 N THR 18 11.660 -5.591 -8.347 1.00 0.00 N ATOM 134 CA THR 18 12.304 -4.574 -7.673 1.00 0.00 C ATOM 135 CB THR 18 13.129 -3.790 -8.768 1.00 0.00 C ATOM 136 C THR 18 11.347 -3.665 -6.900 1.00 0.00 C ATOM 137 O THR 18 11.460 -3.488 -5.692 1.00 0.00 O ATOM 138 OG1 THR 18 14.077 -4.655 -9.377 1.00 0.00 O ATOM 139 CG2 THR 18 13.865 -2.613 -8.105 1.00 0.00 C ATOM 140 N LEU 19 10.356 -3.121 -7.604 1.00 0.00 N ATOM 141 CA LEU 19 9.384 -2.284 -6.929 1.00 0.00 C ATOM 142 CB LEU 19 8.400 -1.737 -7.956 1.00 0.00 C ATOM 143 C LEU 19 8.799 -3.030 -5.678 1.00 0.00 C ATOM 144 O LEU 19 8.810 -2.505 -4.570 1.00 0.00 O ATOM 145 CG LEU 19 7.318 -0.843 -7.348 1.00 0.00 C ATOM 146 CD1 LEU 19 7.832 0.434 -6.684 1.00 0.00 C ATOM 147 CD2 LEU 19 6.271 -0.332 -8.336 1.00 0.00 C ATOM 148 N ILE 20 8.313 -4.254 -5.874 1.00 0.00 N ATOM 149 CA ILE 20 7.838 -5.001 -4.809 1.00 0.00 C ATOM 150 CB ILE 20 7.422 -6.407 -5.297 1.00 0.00 C ATOM 151 C ILE 20 8.858 -5.054 -3.612 1.00 0.00 C ATOM 152 O ILE 20 8.568 -4.710 -2.471 1.00 0.00 O ATOM 153 CG1 ILE 20 6.190 -6.396 -6.218 1.00 0.00 C ATOM 154 CG2 ILE 20 7.061 -7.370 -4.155 1.00 0.00 C ATOM 155 CD1 ILE 20 5.942 -7.731 -6.919 1.00 0.00 C ATOM 156 N SER 21 10.076 -5.489 -3.931 1.00 0.00 N ATOM 157 CA SER 21 11.058 -5.528 -2.908 1.00 0.00 C ATOM 158 CB SER 21 12.373 -6.002 -3.518 1.00 0.00 C ATOM 159 C SER 21 11.190 -4.191 -2.134 1.00 0.00 C ATOM 160 O SER 21 11.117 -4.087 -0.912 1.00 0.00 O ATOM 161 OG SER 21 12.257 -7.353 -3.938 1.00 0.00 O ATOM 162 N ALA 22 11.367 -3.151 -2.938 1.00 0.00 N ATOM 163 CA ALA 22 11.531 -1.821 -2.359 1.00 0.00 C ATOM 164 CB ALA 22 12.124 -1.000 -3.514 1.00 0.00 C ATOM 165 C ALA 22 10.319 -1.324 -1.615 1.00 0.00 C ATOM 166 O ALA 22 10.358 -0.813 -0.505 1.00 0.00 O ATOM 167 N ALA 23 9.173 -1.495 -2.270 1.00 0.00 N ATOM 168 CA ALA 23 7.914 -1.052 -1.538 1.00 0.00 C ATOM 169 CB ALA 23 6.828 -0.872 -2.589 1.00 0.00 C ATOM 170 C ALA 23 7.494 -2.107 -0.513 1.00 0.00 C ATOM 171 O ALA 23 6.755 -1.883 0.445 1.00 0.00 O ATOM 172 N TYR 24 7.938 -3.324 -0.813 1.00 0.00 N ATOM 173 CA TYR 24 7.654 -4.463 0.096 1.00 0.00 C ATOM 174 CB TYR 24 7.608 -5.806 -0.644 1.00 0.00 C ATOM 175 C TYR 24 8.645 -4.596 1.025 1.00 0.00 C ATOM 176 O TYR 24 8.262 -4.816 2.179 1.00 0.00 O ATOM 177 CG TYR 24 6.424 -5.779 -1.548 1.00 0.00 C ATOM 178 CD1 TYR 24 5.372 -4.889 -1.294 1.00 0.00 C ATOM 179 CD2 TYR 24 6.332 -6.630 -2.671 1.00 0.00 C ATOM 180 CE1 TYR 24 4.238 -4.832 -2.127 1.00 0.00 C ATOM 181 CE2 TYR 24 5.186 -6.585 -3.530 1.00 0.00 C ATOM 182 CZ TYR 24 4.148 -5.677 -3.239 1.00 0.00 C ATOM 183 OH TYR 24 3.025 -5.601 -4.034 1.00 0.00 O ATOM 184 N ARG 25 9.928 -4.410 0.712 1.00 0.00 N ATOM 185 CA ARG 25 11.036 -4.440 1.523 1.00 0.00 C ATOM 186 CB ARG 25 12.283 -3.900 0.809 1.00 0.00 C ATOM 187 C ARG 25 10.824 -3.457 2.752 1.00 0.00 C ATOM 188 O ARG 25 11.095 -3.881 3.879 1.00 0.00 O ATOM 189 CG ARG 25 13.544 -3.933 1.675 1.00 0.00 C ATOM 190 CD ARG 25 14.809 -3.501 0.931 1.00 0.00 C ATOM 191 NE ARG 25 15.924 -3.481 1.918 1.00 0.00 N ATOM 192 CZ ARG 25 17.188 -3.159 1.513 1.00 0.00 C ATOM 193 NH1 ARG 25 17.144 -2.903 0.174 1.00 0.00 N ATOM 194 NH2 ARG 25 18.002 -3.217 2.608 1.00 0.00 N ATOM 195 N GLN 26 10.244 -2.279 2.533 1.00 0.00 N ATOM 196 CA GLN 26 9.874 -1.186 3.550 1.00 0.00 C ATOM 197 CB GLN 26 9.966 0.244 3.014 1.00 0.00 C ATOM 198 C GLN 26 8.537 -1.538 4.074 1.00 0.00 C ATOM 199 O GLN 26 8.447 -1.649 5.299 1.00 0.00 O ATOM 200 CG GLN 26 11.396 0.686 2.699 1.00 0.00 C ATOM 201 CD GLN 26 11.331 2.067 2.061 1.00 0.00 C ATOM 202 OE1 GLN 26 10.251 2.583 1.775 1.00 0.00 O ATOM 203 NE2 GLN 26 12.484 2.740 1.803 1.00 0.00 N ATOM 204 N ILE 27 7.471 -1.695 3.260 1.00 0.00 N ATOM 205 CA ILE 27 6.162 -2.041 3.799 1.00 0.00 C ATOM 206 CB ILE 27 5.182 -2.036 2.597 1.00 0.00 C ATOM 207 C ILE 27 6.336 -3.383 4.562 1.00 0.00 C ATOM 208 O ILE 27 5.894 -3.660 5.668 1.00 0.00 O ATOM 209 CG1 ILE 27 5.021 -0.653 1.942 1.00 0.00 C ATOM 210 CG2 ILE 27 3.754 -2.474 2.967 1.00 0.00 C ATOM 211 CD1 ILE 27 4.442 0.403 2.883 1.00 0.00 C ATOM 212 N PHE 28 6.970 -4.262 3.795 1.00 0.00 N ATOM 213 CA PHE 28 7.101 -5.538 4.438 1.00 0.00 C ATOM 214 CB PHE 28 7.353 -6.643 3.466 1.00 0.00 C ATOM 215 C PHE 28 8.764 -5.439 4.240 1.00 0.00 C ATOM 216 O PHE 28 9.525 -6.198 3.643 1.00 0.00 O ATOM 217 CG PHE 28 6.144 -6.767 2.605 1.00 0.00 C ATOM 218 CD1 PHE 28 4.864 -6.363 3.048 1.00 0.00 C ATOM 219 CD2 PHE 28 6.259 -7.299 1.308 1.00 0.00 C ATOM 220 CE1 PHE 28 3.714 -6.482 2.216 1.00 0.00 C ATOM 221 CE2 PHE 28 5.122 -7.429 0.453 1.00 0.00 C ATOM 222 CZ PHE 28 3.844 -7.019 0.911 1.00 0.00 C ATOM 223 N GLU 29 9.177 -4.413 4.964 1.00 0.00 N ATOM 224 CA GLU 29 10.491 -4.142 5.499 1.00 0.00 C ATOM 225 CB GLU 29 9.996 -2.724 5.843 1.00 0.00 C ATOM 226 C GLU 29 10.747 -5.044 6.654 1.00 0.00 C ATOM 227 O GLU 29 10.894 -4.842 7.859 1.00 0.00 O ATOM 228 CG GLU 29 11.084 -1.825 6.432 1.00 0.00 C ATOM 229 CD GLU 29 10.492 -0.436 6.626 1.00 0.00 C ATOM 230 OE1 GLU 29 9.470 -0.325 7.356 1.00 0.00 O ATOM 231 OE2 GLU 29 11.053 0.532 6.047 1.00 0.00 O ATOM 232 N ARG 30 10.907 -6.233 6.087 1.00 0.00 N ATOM 233 CA ARG 30 11.098 -7.232 7.104 1.00 0.00 C ATOM 234 CB ARG 30 11.740 -6.771 8.444 1.00 0.00 C ATOM 235 C ARG 30 10.108 -8.328 7.276 1.00 0.00 C ATOM 236 O ARG 30 10.198 -9.319 8.006 1.00 0.00 O ATOM 237 CG ARG 30 13.219 -6.401 8.316 1.00 0.00 C ATOM 238 CD ARG 30 13.840 -5.899 9.622 1.00 0.00 C ATOM 239 NE ARG 30 15.260 -5.547 9.336 1.00 0.00 N ATOM 240 CZ ARG 30 16.015 -4.931 10.291 1.00 0.00 C ATOM 241 NH1 ARG 30 15.231 -4.758 11.395 1.00 0.00 N ATOM 242 NH2 ARG 30 17.260 -4.727 9.769 1.00 0.00 N ATOM 243 N ASP 31 8.955 -7.935 6.747 1.00 0.00 N ATOM 244 CA ASP 31 7.977 -8.921 6.907 1.00 0.00 C ATOM 245 CB ASP 31 7.136 -8.881 8.197 1.00 0.00 C ATOM 246 C ASP 31 7.080 -9.358 5.714 1.00 0.00 C ATOM 247 O ASP 31 6.322 -10.333 5.644 1.00 0.00 O ATOM 248 CG ASP 31 6.370 -7.566 8.218 1.00 0.00 C ATOM 249 OD1 ASP 31 6.455 -6.816 7.211 1.00 0.00 O ATOM 250 OD2 ASP 31 5.689 -7.295 9.244 1.00 0.00 O ATOM 251 N ILE 32 7.262 -8.506 4.718 1.00 0.00 N ATOM 252 CA ILE 32 6.638 -8.923 3.480 1.00 0.00 C ATOM 253 CB ILE 32 6.423 -7.689 2.577 1.00 0.00 C ATOM 254 C ILE 32 7.592 -9.543 2.595 1.00 0.00 C ATOM 255 O ILE 32 7.464 -9.483 1.372 1.00 0.00 O ATOM 256 CG1 ILE 32 7.733 -6.995 2.165 1.00 0.00 C ATOM 257 CG2 ILE 32 5.574 -6.589 3.235 1.00 0.00 C ATOM 258 CD1 ILE 32 7.541 -5.908 1.109 1.00 0.00 C ATOM 259 N ALA 33 8.740 -9.842 3.213 1.00 0.00 N ATOM 260 CA ALA 33 9.706 -10.459 2.612 1.00 0.00 C ATOM 261 CB ALA 33 11.037 -9.730 2.730 1.00 0.00 C ATOM 262 C ALA 33 10.009 -11.878 2.859 1.00 0.00 C ATOM 263 O ALA 33 10.402 -12.786 2.150 1.00 0.00 O ATOM 264 N PRO 34 9.713 -12.055 4.144 1.00 0.00 N ATOM 265 CA PRO 34 9.969 -13.506 4.519 1.00 0.00 C ATOM 266 CB PRO 34 9.729 -13.540 6.052 1.00 0.00 C ATOM 267 C PRO 34 8.452 -14.013 4.593 1.00 0.00 C ATOM 268 O PRO 34 7.459 -13.836 5.270 1.00 0.00 O ATOM 269 CG PRO 34 8.726 -12.491 6.536 1.00 0.00 C ATOM 270 CD PRO 34 8.735 -11.206 5.706 1.00 0.00 C ATOM 271 N TYR 35 8.418 -14.759 3.515 1.00 0.00 N ATOM 272 CA TYR 35 6.945 -15.255 3.483 1.00 0.00 C ATOM 273 CB TYR 35 6.406 -15.812 4.899 1.00 0.00 C ATOM 274 C TYR 35 6.208 -14.735 2.250 1.00 0.00 C ATOM 275 O TYR 35 6.094 -15.215 1.123 1.00 0.00 O ATOM 276 CG TYR 35 7.182 -17.044 5.221 1.00 0.00 C ATOM 277 CD1 TYR 35 8.280 -16.968 6.086 1.00 0.00 C ATOM 278 CD2 TYR 35 6.833 -18.299 4.676 1.00 0.00 C ATOM 279 CE1 TYR 35 9.035 -18.111 6.417 1.00 0.00 C ATOM 280 CE2 TYR 35 7.592 -19.471 5.002 1.00 0.00 C ATOM 281 CZ TYR 35 8.691 -19.355 5.876 1.00 0.00 C ATOM 282 OH TYR 35 9.452 -20.453 6.214 1.00 0.00 O ATOM 283 N ILE 36 5.721 -13.540 2.569 1.00 0.00 N ATOM 284 CA ILE 36 4.892 -12.927 1.485 1.00 0.00 C ATOM 285 CB ILE 36 4.232 -11.601 1.893 1.00 0.00 C ATOM 286 C ILE 36 5.716 -12.445 0.308 1.00 0.00 C ATOM 287 O ILE 36 5.275 -12.353 -0.837 1.00 0.00 O ATOM 288 CG1 ILE 36 3.163 -11.759 2.988 1.00 0.00 C ATOM 289 CG2 ILE 36 3.517 -10.889 0.732 1.00 0.00 C ATOM 290 CD1 ILE 36 2.686 -10.430 3.570 1.00 0.00 C ATOM 291 N ALA 37 7.001 -12.255 0.586 1.00 0.00 N ATOM 292 CA ALA 37 7.914 -11.857 -0.511 1.00 0.00 C ATOM 293 CB ALA 37 9.254 -11.493 0.104 1.00 0.00 C ATOM 294 C ALA 37 7.831 -12.890 -1.798 1.00 0.00 C ATOM 295 O ALA 37 8.150 -12.656 -2.965 1.00 0.00 O ATOM 296 N GLN 38 7.708 -14.128 -1.324 1.00 0.00 N ATOM 297 CA GLN 38 7.816 -15.063 -2.406 1.00 0.00 C ATOM 298 CB GLN 38 8.769 -16.215 -2.090 1.00 0.00 C ATOM 299 C GLN 38 6.467 -15.669 -2.773 1.00 0.00 C ATOM 300 O GLN 38 6.027 -15.975 -3.883 1.00 0.00 O ATOM 301 CG GLN 38 10.204 -15.761 -1.815 1.00 0.00 C ATOM 302 CD GLN 38 11.030 -16.993 -1.473 1.00 0.00 C ATOM 303 OE1 GLN 38 10.507 -18.104 -1.396 1.00 0.00 O ATOM 304 NE2 GLN 38 12.365 -16.865 -1.250 1.00 0.00 N ATOM 305 N ASN 39 5.855 -15.981 -1.634 1.00 0.00 N ATOM 306 CA ASN 39 4.561 -16.690 -1.793 1.00 0.00 C ATOM 307 CB ASN 39 4.162 -17.333 -0.459 1.00 0.00 C ATOM 308 C ASN 39 3.403 -15.806 -2.211 1.00 0.00 C ATOM 309 O ASN 39 2.485 -16.154 -2.940 1.00 0.00 O ATOM 310 CG ASN 39 5.059 -18.541 -0.233 1.00 0.00 C ATOM 311 OD1 ASN 39 5.002 -19.521 -0.973 1.00 0.00 O ATOM 312 ND2 ASN 39 5.938 -18.537 0.805 1.00 0.00 N ATOM 313 N GLU 40 3.482 -14.570 -1.725 1.00 0.00 N ATOM 314 CA GLU 40 2.438 -13.634 -2.160 1.00 0.00 C ATOM 315 CB GLU 40 2.495 -12.347 -1.262 1.00 0.00 C ATOM 316 C GLU 40 2.839 -13.023 -3.460 1.00 0.00 C ATOM 317 O GLU 40 2.004 -12.811 -4.356 1.00 0.00 O ATOM 318 CG GLU 40 1.422 -11.312 -1.611 1.00 0.00 C ATOM 319 CD GLU 40 1.520 -10.176 -0.603 1.00 0.00 C ATOM 320 OE1 GLU 40 2.394 -10.260 0.301 1.00 0.00 O ATOM 321 OE2 GLU 40 0.722 -9.209 -0.723 1.00 0.00 O ATOM 322 N PHE 41 4.150 -12.848 -3.620 1.00 0.00 N ATOM 323 CA PHE 41 4.750 -12.300 -4.876 1.00 0.00 C ATOM 324 CB PHE 41 6.271 -12.077 -4.741 1.00 0.00 C ATOM 325 C PHE 41 4.138 -13.012 -6.062 1.00 0.00 C ATOM 326 O PHE 41 3.633 -12.286 -6.913 1.00 0.00 O ATOM 327 CG PHE 41 6.769 -11.581 -6.054 1.00 0.00 C ATOM 328 CD1 PHE 41 6.646 -10.227 -6.439 1.00 0.00 C ATOM 329 CD2 PHE 41 7.385 -12.471 -6.952 1.00 0.00 C ATOM 330 CE1 PHE 41 7.129 -9.761 -7.696 1.00 0.00 C ATOM 331 CE2 PHE 41 7.879 -12.031 -8.217 1.00 0.00 C ATOM 332 CZ PHE 41 7.747 -10.668 -8.590 1.00 0.00 C ATOM 333 N SER 42 4.062 -14.339 -6.131 1.00 0.00 N ATOM 334 CA SER 42 3.404 -15.075 -7.085 1.00 0.00 C ATOM 335 CB SER 42 3.332 -16.557 -6.725 1.00 0.00 C ATOM 336 C SER 42 1.949 -14.642 -7.352 1.00 0.00 C ATOM 337 O SER 42 1.465 -14.820 -8.470 1.00 0.00 O ATOM 338 OG SER 42 4.638 -17.112 -6.675 1.00 0.00 O ATOM 339 N GLY 43 1.254 -14.153 -6.322 1.00 0.00 N ATOM 340 CA GLY 43 -0.045 -13.642 -6.438 1.00 0.00 C ATOM 341 C GLY 43 0.082 -12.236 -7.073 1.00 0.00 C ATOM 342 O GLY 43 -0.797 -11.753 -7.761 1.00 0.00 O ATOM 343 N TRP 44 1.228 -11.609 -6.846 1.00 0.00 N ATOM 344 CA TRP 44 1.467 -10.283 -7.452 1.00 0.00 C ATOM 345 CB TRP 44 2.642 -9.593 -6.752 1.00 0.00 C ATOM 346 C TRP 44 1.946 -10.484 -8.820 1.00 0.00 C ATOM 347 O TRP 44 1.651 -9.611 -9.631 1.00 0.00 O ATOM 348 CG TRP 44 2.350 -9.177 -5.329 1.00 0.00 C ATOM 349 CD1 TRP 44 2.756 -9.750 -4.159 1.00 0.00 C ATOM 350 CD2 TRP 44 1.559 -8.059 -4.902 1.00 0.00 C ATOM 351 NE1 TRP 44 2.321 -9.131 -3.079 1.00 0.00 N ATOM 352 CE2 TRP 44 1.565 -8.061 -3.482 1.00 0.00 C ATOM 353 CE3 TRP 44 0.845 -7.048 -5.579 1.00 0.00 C ATOM 354 CZ2 TRP 44 0.875 -7.083 -2.715 1.00 0.00 C ATOM 355 CZ3 TRP 44 0.149 -6.063 -4.816 1.00 0.00 C ATOM 356 CH2 TRP 44 0.175 -6.097 -3.399 1.00 0.00 C ATOM 357 N GLU 45 2.601 -11.592 -9.168 1.00 0.00 N ATOM 358 CA GLU 45 3.042 -11.941 -10.467 1.00 0.00 C ATOM 359 CB GLU 45 4.160 -13.014 -10.566 1.00 0.00 C ATOM 360 C GLU 45 1.778 -12.519 -11.128 1.00 0.00 C ATOM 361 O GLU 45 1.478 -12.062 -12.225 1.00 0.00 O ATOM 362 CG GLU 45 4.549 -13.360 -12.005 1.00 0.00 C ATOM 363 CD GLU 45 5.203 -12.132 -12.622 1.00 0.00 C ATOM 364 OE1 GLU 45 5.450 -11.152 -11.870 1.00 0.00 O ATOM 365 OE2 GLU 45 5.468 -12.159 -13.853 1.00 0.00 O ATOM 366 N SER 46 1.002 -13.391 -10.488 1.00 0.00 N ATOM 367 CA SER 46 -0.254 -13.853 -10.936 1.00 0.00 C ATOM 368 CB SER 46 -0.970 -14.676 -9.870 1.00 0.00 C ATOM 369 C SER 46 -1.048 -12.603 -11.491 1.00 0.00 C ATOM 370 O SER 46 -1.360 -12.480 -12.670 1.00 0.00 O ATOM 371 OG SER 46 -2.235 -15.103 -10.351 1.00 0.00 O ATOM 372 N LYS 47 -1.428 -11.729 -10.556 1.00 0.00 N ATOM 373 CA LYS 47 -1.960 -10.520 -11.058 1.00 0.00 C ATOM 374 CB LYS 47 -2.354 -9.753 -9.788 1.00 0.00 C ATOM 375 C LYS 47 -1.244 -9.998 -12.276 1.00 0.00 C ATOM 376 O LYS 47 -1.560 -9.892 -13.468 1.00 0.00 O ATOM 377 CG LYS 47 -3.026 -8.408 -10.070 1.00 0.00 C ATOM 378 CD LYS 47 -3.460 -7.663 -8.806 1.00 0.00 C ATOM 379 CE LYS 47 -4.201 -6.355 -9.091 1.00 0.00 C ATOM 380 NZ LYS 47 -3.274 -5.366 -9.685 1.00 0.00 N ATOM 381 N LEU 48 -0.050 -9.632 -11.826 1.00 0.00 N ATOM 382 CA LEU 48 0.716 -9.204 -13.015 1.00 0.00 C ATOM 383 CB LEU 48 2.145 -8.924 -12.546 1.00 0.00 C ATOM 384 C LEU 48 0.987 -9.997 -14.196 1.00 0.00 C ATOM 385 O LEU 48 1.267 -9.643 -15.345 1.00 0.00 O ATOM 386 CG LEU 48 3.021 -8.265 -13.615 1.00 0.00 C ATOM 387 CD1 LEU 48 2.518 -6.912 -14.116 1.00 0.00 C ATOM 388 CD2 LEU 48 4.457 -7.973 -13.182 1.00 0.00 C ATOM 389 N GLY 49 0.894 -11.271 -13.827 1.00 0.00 N ATOM 390 CA GLY 49 1.038 -12.194 -14.734 1.00 0.00 C ATOM 391 C GLY 49 -0.132 -12.372 -15.650 1.00 0.00 C ATOM 392 O GLY 49 0.035 -12.393 -16.872 1.00 0.00 O ATOM 393 N ASN 50 -1.341 -12.359 -15.093 1.00 0.00 N ATOM 394 CA ASN 50 -2.557 -12.205 -15.859 1.00 0.00 C ATOM 395 CB ASN 50 -3.328 -11.089 -15.146 1.00 0.00 C ATOM 396 C ASN 50 -2.389 -10.975 -16.904 1.00 0.00 C ATOM 397 O ASN 50 -3.350 -10.671 -17.671 1.00 0.00 O ATOM 398 CG ASN 50 -4.730 -11.035 -15.736 1.00 0.00 C ATOM 399 OD1 ASN 50 -4.972 -11.518 -16.840 1.00 0.00 O ATOM 400 ND2 ASN 50 -5.731 -10.442 -15.029 1.00 0.00 N ATOM 401 N GLY 51 -1.200 -10.360 -16.938 1.00 0.00 N ATOM 402 CA GLY 51 -0.973 -9.338 -17.726 1.00 0.00 C ATOM 403 C GLY 51 -1.324 -7.947 -17.344 1.00 0.00 C ATOM 404 O GLY 51 -0.772 -6.928 -17.777 1.00 0.00 O ATOM 405 N GLU 52 -2.412 -7.923 -16.579 1.00 0.00 N ATOM 406 CA GLU 52 -2.730 -6.729 -15.958 1.00 0.00 C ATOM 407 CB GLU 52 -4.241 -6.814 -15.733 1.00 0.00 C ATOM 408 C GLU 52 -2.574 -6.314 -14.510 1.00 0.00 C ATOM 409 O GLU 52 -3.408 -5.802 -13.768 1.00 0.00 O ATOM 410 CG GLU 52 -5.054 -6.777 -17.029 1.00 0.00 C ATOM 411 CD GLU 52 -6.492 -7.140 -16.691 1.00 0.00 C ATOM 412 OE1 GLU 52 -6.765 -7.431 -15.496 1.00 0.00 O ATOM 413 OE2 GLU 52 -7.339 -7.131 -17.625 1.00 0.00 O ATOM 414 N ILE 53 -1.309 -6.459 -14.103 1.00 0.00 N ATOM 415 CA ILE 53 -0.724 -5.446 -13.222 1.00 0.00 C ATOM 416 CB ILE 53 0.592 -5.913 -12.643 1.00 0.00 C ATOM 417 C ILE 53 0.009 -4.379 -13.716 1.00 0.00 C ATOM 418 O ILE 53 1.221 -4.287 -13.642 1.00 0.00 O ATOM 419 CG1 ILE 53 1.664 -6.201 -13.708 1.00 0.00 C ATOM 420 CG2 ILE 53 0.476 -7.213 -11.828 1.00 0.00 C ATOM 421 CD1 ILE 53 3.051 -6.461 -13.122 1.00 0.00 C ATOM 422 N THR 54 -0.707 -3.695 -14.592 1.00 0.00 N ATOM 423 CA THR 54 0.300 -3.048 -15.172 1.00 0.00 C ATOM 424 CB THR 54 -1.043 -2.592 -15.807 1.00 0.00 C ATOM 425 C THR 54 1.243 -1.888 -15.176 1.00 0.00 C ATOM 426 O THR 54 1.732 -1.068 -15.979 1.00 0.00 O ATOM 427 OG1 THR 54 -1.929 -2.135 -14.797 1.00 0.00 O ATOM 428 CG2 THR 54 -1.684 -3.777 -16.549 1.00 0.00 C ATOM 429 N VAL 55 1.612 -1.902 -13.889 1.00 0.00 N ATOM 430 CA VAL 55 2.652 -0.792 -13.684 1.00 0.00 C ATOM 431 CB VAL 55 3.741 0.040 -14.383 1.00 0.00 C ATOM 432 C VAL 55 1.789 0.170 -12.733 1.00 0.00 C ATOM 433 O VAL 55 2.090 0.587 -11.612 1.00 0.00 O ATOM 434 CG1 VAL 55 4.231 1.226 -13.549 1.00 0.00 C ATOM 435 CG2 VAL 55 5.001 -0.762 -14.717 1.00 0.00 C ATOM 436 N LYS 56 0.677 0.528 -13.372 1.00 0.00 N ATOM 437 CA LYS 56 -0.264 1.418 -12.685 1.00 0.00 C ATOM 438 CB LYS 56 -1.202 2.252 -13.578 1.00 0.00 C ATOM 439 C LYS 56 -0.850 0.510 -11.563 1.00 0.00 C ATOM 440 O LYS 56 -0.779 0.756 -10.351 1.00 0.00 O ATOM 441 CG LYS 56 -2.161 3.145 -12.790 1.00 0.00 C ATOM 442 CD LYS 56 -3.064 4.007 -13.675 1.00 0.00 C ATOM 443 CE LYS 56 -4.035 4.887 -12.887 1.00 0.00 C ATOM 444 NZ LYS 56 -4.889 5.659 -13.817 1.00 0.00 N ATOM 445 N GLU 57 -1.434 -0.586 -12.046 1.00 0.00 N ATOM 446 CA GLU 57 -2.039 -1.514 -11.058 1.00 0.00 C ATOM 447 CB GLU 57 -2.667 -2.691 -11.797 1.00 0.00 C ATOM 448 C GLU 57 -1.056 -1.863 -9.981 1.00 0.00 C ATOM 449 O GLU 57 -1.373 -1.743 -8.804 1.00 0.00 O ATOM 450 CG GLU 57 -3.952 -2.328 -12.544 1.00 0.00 C ATOM 451 CD GLU 57 -4.981 -1.875 -11.516 1.00 0.00 C ATOM 452 OE1 GLU 57 -5.170 -2.607 -10.508 1.00 0.00 O ATOM 453 OE2 GLU 57 -5.589 -0.792 -11.726 1.00 0.00 O ATOM 454 N PHE 58 0.117 -2.341 -10.379 1.00 0.00 N ATOM 455 CA PHE 58 1.198 -2.706 -9.461 1.00 0.00 C ATOM 456 CB PHE 58 2.493 -3.116 -10.210 1.00 0.00 C ATOM 457 C PHE 58 1.603 -1.655 -8.525 1.00 0.00 C ATOM 458 O PHE 58 1.628 -1.931 -7.334 1.00 0.00 O ATOM 459 CG PHE 58 3.529 -3.416 -9.183 1.00 0.00 C ATOM 460 CD1 PHE 58 3.576 -4.656 -8.507 1.00 0.00 C ATOM 461 CD2 PHE 58 4.500 -2.449 -8.863 1.00 0.00 C ATOM 462 CE1 PHE 58 4.573 -4.935 -7.528 1.00 0.00 C ATOM 463 CE2 PHE 58 5.510 -2.703 -7.886 1.00 0.00 C ATOM 464 CZ PHE 58 5.544 -3.953 -7.214 1.00 0.00 C ATOM 465 N ILE 59 1.834 -0.421 -8.965 1.00 0.00 N ATOM 466 CA ILE 59 2.094 0.720 -8.071 1.00 0.00 C ATOM 467 CB ILE 59 2.419 2.007 -8.924 1.00 0.00 C ATOM 468 C ILE 59 0.904 0.885 -7.155 1.00 0.00 C ATOM 469 O ILE 59 1.103 0.948 -5.933 1.00 0.00 O ATOM 470 CG1 ILE 59 3.752 1.917 -9.687 1.00 0.00 C ATOM 471 CG2 ILE 59 2.524 3.290 -8.082 1.00 0.00 C ATOM 472 CD1 ILE 59 3.941 3.028 -10.718 1.00 0.00 C ATOM 473 N GLU 60 -0.316 0.887 -7.691 1.00 0.00 N ATOM 474 CA GLU 60 -1.521 0.951 -6.924 1.00 0.00 C ATOM 475 CB GLU 60 -2.755 0.922 -7.819 1.00 0.00 C ATOM 476 C GLU 60 -1.423 -0.173 -5.807 1.00 0.00 C ATOM 477 O GLU 60 -1.532 0.125 -4.622 1.00 0.00 O ATOM 478 CG GLU 60 -2.967 2.216 -8.608 1.00 0.00 C ATOM 479 CD GLU 60 -4.249 2.069 -9.414 1.00 0.00 C ATOM 480 OE1 GLU 60 -4.841 0.957 -9.389 1.00 0.00 O ATOM 481 OE2 GLU 60 -4.654 3.068 -10.068 1.00 0.00 O ATOM 482 N GLY 61 -1.216 -1.428 -6.202 1.00 0.00 N ATOM 483 CA GLY 61 -1.069 -2.447 -5.295 1.00 0.00 C ATOM 484 C GLY 61 -0.066 -2.019 -4.142 1.00 0.00 C ATOM 485 O GLY 61 -0.362 -1.975 -2.952 1.00 0.00 O ATOM 486 N LEU 62 1.157 -1.718 -4.576 1.00 0.00 N ATOM 487 CA LEU 62 2.121 -1.340 -3.564 1.00 0.00 C ATOM 488 CB LEU 62 3.468 -1.148 -4.251 1.00 0.00 C ATOM 489 C LEU 62 1.675 -0.210 -2.713 1.00 0.00 C ATOM 490 O LEU 62 1.750 -0.231 -1.485 1.00 0.00 O ATOM 491 CG LEU 62 4.592 -0.760 -3.289 1.00 0.00 C ATOM 492 CD1 LEU 62 4.895 -1.789 -2.200 1.00 0.00 C ATOM 493 CD2 LEU 62 5.953 -0.528 -3.946 1.00 0.00 C ATOM 494 N GLY 63 1.129 0.801 -3.386 1.00 0.00 N ATOM 495 CA GLY 63 0.597 1.987 -2.602 1.00 0.00 C ATOM 496 C GLY 63 -0.271 1.456 -1.422 1.00 0.00 C ATOM 497 O GLY 63 -0.077 1.720 -0.227 1.00 0.00 O ATOM 498 N TYR 64 -1.273 0.685 -1.840 1.00 0.00 N ATOM 499 CA TYR 64 -2.142 0.164 -0.824 1.00 0.00 C ATOM 500 CB TYR 64 -3.214 -0.649 -1.564 1.00 0.00 C ATOM 501 C TYR 64 -1.427 -0.654 0.199 1.00 0.00 C ATOM 502 O TYR 64 -1.579 -0.506 1.411 1.00 0.00 O ATOM 503 CG TYR 64 -4.123 -1.232 -0.537 1.00 0.00 C ATOM 504 CD1 TYR 64 -5.104 -0.431 0.062 1.00 0.00 C ATOM 505 CD2 TYR 64 -4.026 -2.587 -0.148 1.00 0.00 C ATOM 506 CE1 TYR 64 -5.982 -0.947 1.034 1.00 0.00 C ATOM 507 CE2 TYR 64 -4.911 -3.127 0.840 1.00 0.00 C ATOM 508 CZ TYR 64 -5.885 -2.289 1.420 1.00 0.00 C ATOM 509 OH TYR 64 -6.756 -2.764 2.376 1.00 0.00 O ATOM 510 N SER 65 -0.550 -1.510 -0.320 1.00 0.00 N ATOM 511 CA SER 65 0.264 -2.369 0.614 1.00 0.00 C ATOM 512 CB SER 65 1.205 -3.303 -0.169 1.00 0.00 C ATOM 513 C SER 65 1.079 -1.610 1.678 1.00 0.00 C ATOM 514 O SER 65 1.444 -2.114 2.738 1.00 0.00 O ATOM 515 OG SER 65 0.448 -4.231 -0.932 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 498 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 67.22 65.3 124 100.0 124 ARMSMC SECONDARY STRUCTURE . . 39.29 85.4 82 100.0 82 ARMSMC SURFACE . . . . . . . . 74.20 60.0 90 100.0 90 ARMSMC BURIED . . . . . . . . 43.65 79.4 34 100.0 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.57 54.0 50 100.0 50 ARMSSC1 RELIABLE SIDE CHAINS . 79.17 53.2 47 100.0 47 ARMSSC1 SECONDARY STRUCTURE . . 73.91 56.2 32 100.0 32 ARMSSC1 SURFACE . . . . . . . . 82.11 48.7 39 100.0 39 ARMSSC1 BURIED . . . . . . . . 64.43 72.7 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.85 53.7 41 100.0 41 ARMSSC2 RELIABLE SIDE CHAINS . 72.20 55.6 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 77.58 51.9 27 100.0 27 ARMSSC2 SURFACE . . . . . . . . 71.93 50.0 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 71.64 63.6 11 100.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 84.27 41.2 17 100.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 70.41 46.7 15 100.0 15 ARMSSC3 SECONDARY STRUCTURE . . 92.94 27.3 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 84.33 43.8 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 83.29 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 88.37 22.2 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 88.37 22.2 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 89.37 20.0 5 100.0 5 ARMSSC4 SURFACE . . . . . . . . 88.37 22.2 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.87 (Number of atoms: 63) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.87 63 100.0 63 CRMSCA CRN = ALL/NP . . . . . 0.0614 CRMSCA SECONDARY STRUCTURE . . 3.41 41 100.0 41 CRMSCA SURFACE . . . . . . . . 4.14 46 100.0 46 CRMSCA BURIED . . . . . . . . 3.00 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.94 309 100.0 309 CRMSMC SECONDARY STRUCTURE . . 3.48 201 100.0 201 CRMSMC SURFACE . . . . . . . . 4.20 226 100.0 226 CRMSMC BURIED . . . . . . . . 3.14 83 100.0 83 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 5.74 246 32.8 750 CRMSSC RELIABLE SIDE CHAINS . 5.74 226 31.0 730 CRMSSC SECONDARY STRUCTURE . . 4.17 158 32.6 484 CRMSSC SURFACE . . . . . . . . 6.16 184 33.2 554 CRMSSC BURIED . . . . . . . . 4.24 62 31.6 196 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 4.88 498 49.7 1002 CRMSALL SECONDARY STRUCTURE . . 3.82 322 49.7 648 CRMSALL SURFACE . . . . . . . . 5.22 368 49.9 738 CRMSALL BURIED . . . . . . . . 3.72 130 49.2 264 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.461 1.000 0.500 63 100.0 63 ERRCA SECONDARY STRUCTURE . . 3.012 1.000 0.500 41 100.0 41 ERRCA SURFACE . . . . . . . . 3.771 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 2.622 1.000 0.500 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 3.494 1.000 0.500 309 100.0 309 ERRMC SECONDARY STRUCTURE . . 3.050 1.000 0.500 201 100.0 201 ERRMC SURFACE . . . . . . . . 3.783 1.000 0.500 226 100.0 226 ERRMC BURIED . . . . . . . . 2.706 1.000 0.500 83 100.0 83 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.885 1.000 0.500 246 32.8 750 ERRSC RELIABLE SIDE CHAINS . 4.883 1.000 0.500 226 31.0 730 ERRSC SECONDARY STRUCTURE . . 3.778 1.000 0.500 158 32.6 484 ERRSC SURFACE . . . . . . . . 5.322 1.000 0.500 184 33.2 554 ERRSC BURIED . . . . . . . . 3.586 1.000 0.500 62 31.6 196 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.148 1.000 0.500 498 49.7 1002 ERRALL SECONDARY STRUCTURE . . 3.397 1.000 0.500 322 49.7 648 ERRALL SURFACE . . . . . . . . 4.506 1.000 0.500 368 49.9 738 ERRALL BURIED . . . . . . . . 3.132 1.000 0.500 130 49.2 264 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 6 14 26 50 63 63 63 DISTCA CA (P) 9.52 22.22 41.27 79.37 100.00 63 DISTCA CA (RMS) 0.77 1.29 2.01 3.04 3.87 DISTCA ALL (N) 31 90 180 355 482 498 1002 DISTALL ALL (P) 3.09 8.98 17.96 35.43 48.10 1002 DISTALL ALL (RMS) 0.77 1.39 2.04 3.14 4.35 DISTALL END of the results output