####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 63 ( 498), selected 63 , name T0553TS104_1-D1 # Molecule2: number of CA atoms 63 ( 1002), selected 63 , name T0553-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0553TS104_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 8 - 44 4.96 10.71 LCS_AVERAGE: 54.57 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 41 - 63 1.98 16.45 LONGEST_CONTINUOUS_SEGMENT: 23 42 - 64 1.34 16.08 LCS_AVERAGE: 29.05 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 11 - 28 0.96 13.74 LONGEST_CONTINUOUS_SEGMENT: 18 12 - 29 0.89 13.05 LCS_AVERAGE: 19.93 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 63 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 3 V 3 3 4 13 3 3 3 3 4 6 6 9 9 10 10 10 11 12 12 12 12 14 14 15 LCS_GDT F 4 F 4 3 4 13 3 3 3 3 4 6 8 9 9 10 10 11 11 12 12 14 14 14 14 15 LCS_GDT K 5 K 5 3 4 13 3 3 3 4 7 7 8 9 9 10 10 11 13 13 13 14 14 16 20 21 LCS_GDT R 6 R 6 3 6 28 3 3 3 4 7 7 8 9 9 10 10 11 13 13 13 14 19 21 26 30 LCS_GDT V 7 V 7 3 6 36 3 3 3 3 7 7 8 9 9 12 17 21 25 29 32 35 40 43 46 47 LCS_GDT A 8 A 8 3 6 37 3 3 4 7 11 16 19 22 26 28 31 34 37 39 42 43 44 45 47 48 LCS_GDT G 9 G 9 4 22 37 5 7 14 17 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT I 10 I 10 4 22 37 3 3 4 4 7 21 22 23 25 29 31 33 37 38 42 43 44 45 47 47 LCS_GDT K 11 K 11 18 22 37 3 5 11 15 20 21 22 23 25 29 30 33 37 38 42 43 44 45 47 47 LCS_GDT D 12 D 12 18 22 37 8 16 18 19 20 21 22 26 27 30 32 34 37 39 42 43 44 45 47 47 LCS_GDT K 13 K 13 18 22 37 8 16 18 19 20 21 22 26 27 29 31 34 37 39 42 43 44 45 47 48 LCS_GDT A 14 A 14 18 22 37 8 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT A 15 A 15 18 22 37 8 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT I 16 I 16 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT K 17 K 17 18 22 37 8 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT T 18 T 18 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT L 19 L 19 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT I 20 I 20 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT S 21 S 21 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT A 22 A 22 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT A 23 A 23 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT Y 24 Y 24 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT R 25 R 25 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT Q 26 Q 26 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT I 27 I 27 18 22 37 9 16 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT F 28 F 28 18 22 37 6 14 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT E 29 E 29 18 22 37 4 9 18 19 20 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT R 30 R 30 5 22 37 3 4 5 12 18 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT D 31 D 31 3 8 37 3 3 4 5 9 11 16 19 20 24 29 32 37 39 42 43 44 45 47 48 LCS_GDT I 32 I 32 3 8 37 3 3 5 6 9 14 16 20 24 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT A 33 A 33 4 5 37 4 4 5 5 8 14 20 25 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT P 34 P 34 4 5 37 4 4 5 5 8 11 15 19 20 24 29 31 34 38 41 43 44 45 47 48 LCS_GDT Y 35 Y 35 4 5 37 4 4 5 6 11 12 17 22 25 25 29 33 37 39 42 43 44 45 47 48 LCS_GDT I 36 I 36 4 5 37 4 4 5 8 14 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT A 37 A 37 4 5 37 3 4 5 5 6 10 16 20 23 29 32 34 37 39 42 43 44 45 47 48 LCS_GDT Q 38 Q 38 4 5 37 3 4 5 7 14 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT N 39 N 39 4 5 37 3 4 5 12 16 21 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT E 40 E 40 4 16 37 3 5 5 5 8 14 19 25 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT F 41 F 41 4 23 37 3 5 5 6 9 14 19 21 26 29 32 34 37 39 42 43 44 45 47 48 LCS_GDT S 42 S 42 17 23 37 6 12 17 23 23 23 23 24 25 27 32 33 37 39 42 43 44 45 47 48 LCS_GDT G 43 G 43 17 23 37 6 12 17 23 23 23 23 24 25 25 26 31 35 38 41 42 44 45 47 48 LCS_GDT W 44 W 44 17 23 37 6 12 16 23 23 23 23 24 25 28 32 33 37 39 42 43 44 45 47 48 LCS_GDT E 45 E 45 17 23 34 9 12 16 23 23 23 23 24 25 25 29 33 36 38 41 43 44 45 47 48 LCS_GDT S 46 S 46 17 23 33 9 12 17 23 23 23 23 24 25 25 26 30 34 35 38 41 44 45 46 48 LCS_GDT K 47 K 47 17 23 33 9 12 17 23 23 23 23 24 25 25 26 31 34 35 38 41 44 45 46 48 LCS_GDT L 48 L 48 17 23 33 9 12 17 23 23 23 23 24 25 25 27 31 34 35 38 41 44 45 46 48 LCS_GDT G 49 G 49 17 23 33 9 12 17 23 23 23 23 24 25 25 26 28 31 34 36 39 40 42 45 46 LCS_GDT N 50 N 50 17 23 33 9 12 17 23 23 23 23 24 25 25 26 27 30 33 36 38 40 42 45 45 LCS_GDT G 51 G 51 17 23 33 9 12 17 23 23 23 23 24 25 25 26 28 31 34 36 39 40 42 45 46 LCS_GDT E 52 E 52 17 23 33 9 12 17 23 23 23 23 24 25 25 26 28 31 35 36 39 40 42 45 46 LCS_GDT I 53 I 53 17 23 33 9 12 17 23 23 23 23 24 25 25 27 31 34 36 41 42 44 45 46 48 LCS_GDT T 54 T 54 17 23 33 8 11 16 23 23 23 23 24 25 25 29 31 35 38 41 42 44 45 47 48 LCS_GDT V 55 V 55 17 23 33 8 11 17 23 23 23 23 24 25 25 29 32 36 38 41 43 44 45 47 48 LCS_GDT K 56 K 56 17 23 33 8 12 17 23 23 23 23 25 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT E 57 E 57 17 23 33 8 12 17 23 23 23 23 25 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT F 58 F 58 17 23 33 8 11 17 23 23 23 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT I 59 I 59 14 23 33 8 11 17 23 23 23 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT E 60 E 60 14 23 33 6 15 18 23 23 23 23 26 27 30 32 34 37 39 42 43 44 45 47 48 LCS_GDT G 61 G 61 14 23 33 8 11 17 23 23 23 23 24 25 28 29 33 37 39 42 43 44 45 47 48 LCS_GDT L 62 L 62 14 23 33 8 11 17 23 23 23 23 24 25 25 29 33 37 39 42 43 44 45 47 48 LCS_GDT G 63 G 63 14 23 33 8 11 17 23 23 23 23 24 25 25 26 27 29 32 35 37 42 45 46 47 LCS_GDT Y 64 Y 64 14 23 33 3 8 16 23 23 23 23 24 25 25 26 27 29 31 33 35 38 40 41 44 LCS_GDT S 65 S 65 3 20 33 3 3 3 3 4 6 14 14 16 22 24 25 26 27 29 30 32 32 33 35 LCS_AVERAGE LCS_A: 34.52 ( 19.93 29.05 54.57 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 16 18 23 23 23 23 26 27 30 32 34 37 39 42 43 44 45 47 48 GDT PERCENT_AT 14.29 25.40 28.57 36.51 36.51 36.51 36.51 41.27 42.86 47.62 50.79 53.97 58.73 61.90 66.67 68.25 69.84 71.43 74.60 76.19 GDT RMS_LOCAL 0.28 0.67 0.78 1.34 1.34 1.34 1.34 2.50 2.64 3.17 3.40 3.56 3.92 4.34 4.60 4.73 4.86 5.01 5.38 5.93 GDT RMS_ALL_AT 13.34 13.42 13.23 16.08 16.08 16.08 16.08 11.20 11.09 10.85 10.76 10.81 11.09 10.45 10.74 10.73 10.68 10.59 10.41 9.86 # Checking swapping # possible swapping detected: F 4 F 4 # possible swapping detected: D 12 D 12 # possible swapping detected: Y 24 Y 24 # possible swapping detected: F 28 F 28 # possible swapping detected: E 29 E 29 # possible swapping detected: D 31 D 31 # possible swapping detected: Y 35 Y 35 # possible swapping detected: E 40 E 40 # possible swapping detected: E 45 E 45 # possible swapping detected: E 52 E 52 # possible swapping detected: F 58 F 58 # possible swapping detected: Y 64 Y 64 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 3 V 3 28.373 0 0.113 1.094 30.034 0.000 0.000 LGA F 4 F 4 25.414 0 0.582 1.446 27.798 0.000 0.000 LGA K 5 K 5 20.336 0 0.704 1.037 22.044 0.000 0.000 LGA R 6 R 6 15.713 0 0.622 0.675 19.524 0.000 0.000 LGA V 7 V 7 10.990 0 0.681 0.627 14.971 2.500 1.429 LGA A 8 A 8 6.353 0 0.286 0.321 8.046 30.595 25.905 LGA G 9 G 9 0.889 0 0.683 0.683 2.697 77.619 77.619 LGA I 10 I 10 4.659 0 0.526 1.330 8.509 31.190 22.976 LGA K 11 K 11 6.349 0 0.655 1.111 16.067 24.048 11.481 LGA D 12 D 12 3.346 0 0.185 1.189 4.352 48.571 55.774 LGA K 13 K 13 3.240 0 0.028 1.021 9.233 53.571 36.402 LGA A 14 A 14 1.495 0 0.105 0.107 2.109 77.262 78.095 LGA A 15 A 15 0.942 0 0.032 0.040 1.176 85.952 85.048 LGA I 16 I 16 1.506 0 0.041 0.965 2.743 79.286 72.083 LGA K 17 K 17 1.669 0 0.101 1.042 4.494 75.000 65.450 LGA T 18 T 18 0.880 0 0.037 0.161 1.095 88.214 89.184 LGA L 19 L 19 0.429 0 0.038 0.976 4.571 95.238 80.060 LGA I 20 I 20 1.523 0 0.040 1.224 3.602 75.000 67.262 LGA S 21 S 21 2.174 0 0.043 0.623 2.615 68.810 67.540 LGA A 22 A 22 1.660 0 0.039 0.037 1.678 75.000 74.571 LGA A 23 A 23 0.757 0 0.047 0.087 1.117 90.476 88.667 LGA Y 24 Y 24 1.967 0 0.042 1.389 5.503 70.952 60.952 LGA R 25 R 25 2.989 0 0.135 0.817 3.654 55.595 67.662 LGA Q 26 Q 26 2.270 0 0.024 1.041 3.707 66.786 60.794 LGA I 27 I 27 0.958 0 0.127 1.501 3.386 88.214 78.988 LGA F 28 F 28 0.798 0 0.075 0.890 3.813 83.810 69.610 LGA E 29 E 29 1.643 0 0.514 0.891 4.247 71.071 61.958 LGA R 30 R 30 2.425 0 0.620 1.032 11.100 46.548 22.294 LGA D 31 D 31 8.295 0 0.617 0.839 14.379 9.762 4.881 LGA I 32 I 32 7.022 0 0.616 1.434 7.603 9.405 15.060 LGA A 33 A 33 6.211 0 0.663 0.601 7.110 15.357 15.714 LGA P 34 P 34 10.912 0 0.770 1.015 13.757 0.119 0.068 LGA Y 35 Y 35 10.587 0 0.176 0.944 13.412 2.976 0.992 LGA I 36 I 36 4.103 0 0.269 1.177 6.389 35.357 42.024 LGA A 37 A 37 6.796 0 0.435 0.421 9.142 14.405 11.810 LGA Q 38 Q 38 4.492 0 0.024 1.055 5.428 37.262 43.545 LGA N 39 N 39 4.023 0 0.081 0.135 4.787 34.286 38.869 LGA E 40 E 40 5.617 0 0.565 0.683 5.835 23.810 26.984 LGA F 41 F 41 7.318 0 0.116 1.323 11.851 7.738 3.203 LGA S 42 S 42 10.088 0 0.560 0.484 12.283 0.714 1.905 LGA G 43 G 43 13.890 0 0.120 0.120 14.329 0.000 0.000 LGA W 44 W 44 9.702 0 0.100 1.199 11.093 0.119 3.401 LGA E 45 E 45 11.652 0 0.088 0.655 15.591 0.000 0.000 LGA S 46 S 46 17.952 0 0.030 0.030 20.484 0.000 0.000 LGA K 47 K 47 17.578 0 0.050 0.834 20.524 0.000 0.000 LGA L 48 L 48 16.053 0 0.060 1.269 19.828 0.000 0.000 LGA G 49 G 49 21.519 0 0.088 0.088 25.487 0.000 0.000 LGA N 50 N 50 25.583 0 0.648 0.638 28.672 0.000 0.000 LGA G 51 G 51 23.276 0 0.073 0.073 23.466 0.000 0.000 LGA E 52 E 52 21.778 0 0.058 1.085 28.453 0.000 0.000 LGA I 53 I 53 15.334 0 0.142 1.190 17.577 0.000 0.000 LGA T 54 T 54 12.715 0 0.023 0.536 13.132 0.119 0.136 LGA V 55 V 55 9.597 0 0.038 0.085 13.117 7.262 4.150 LGA K 56 K 56 5.753 0 0.159 0.727 7.671 30.714 32.328 LGA E 57 E 57 5.651 0 0.046 0.630 9.366 25.000 12.434 LGA F 58 F 58 4.323 0 0.036 1.354 5.211 48.214 43.203 LGA I 59 I 59 2.281 0 0.051 1.359 7.519 57.976 39.345 LGA E 60 E 60 3.957 0 0.088 1.101 7.555 34.167 32.328 LGA G 61 G 61 7.261 0 0.055 0.055 9.194 10.714 10.714 LGA L 62 L 62 6.378 0 0.033 1.302 10.236 10.833 31.667 LGA G 63 G 63 10.502 0 0.184 0.184 14.193 1.190 1.190 LGA Y 64 Y 64 14.796 0 0.104 1.373 21.551 0.000 0.000 LGA S 65 S 65 19.208 0 0.218 0.549 20.465 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 63 252 252 100.00 498 498 100.00 63 SUMMARY(RMSD_GDC): 9.434 9.385 10.197 31.410 29.171 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 63 63 4.0 26 2.50 42.857 38.876 0.999 LGA_LOCAL RMSD: 2.502 Number of atoms: 26 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.205 Number of assigned atoms: 63 Std_ASGN_ATOMS RMSD: 9.434 Standard rmsd on all 63 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.328537 * X + 0.939908 * Y + 0.092934 * Z + -34.939095 Y_new = 0.708123 * X + -0.310234 * Y + 0.634285 * Z + -40.491425 Z_new = 0.625001 * X + -0.142577 * Y + -0.767493 * Z + -1.828891 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.136399 -0.675133 -2.957917 [DEG: 65.1109 -38.6822 -169.4762 ] ZXZ: 2.996110 2.445718 1.795081 [DEG: 171.6644 140.1293 102.8506 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0553TS104_1-D1 REMARK 2: T0553-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0553TS104_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 63 63 4.0 26 2.50 38.876 9.43 REMARK ---------------------------------------------------------- MOLECULE T0553TS104_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0553 REMARK MODEL 1 REMARK PARENT N/A ATOM 18 N VAL 3 7.370 -0.708 -36.584 1.00 0.00 N ATOM 19 CA VAL 3 8.390 -1.060 -35.617 1.00 0.00 C ATOM 20 CB VAL 3 8.950 0.205 -34.960 1.00 0.00 C ATOM 21 CG1 VAL 3 9.708 0.999 -35.971 1.00 0.00 C ATOM 22 CG2 VAL 3 7.912 1.077 -34.235 1.00 0.00 C ATOM 23 C VAL 3 7.771 -1.914 -34.548 1.00 0.00 C ATOM 24 O VAL 3 6.751 -1.513 -34.002 1.00 0.00 O ATOM 25 N PHE 4 8.394 -3.025 -34.192 1.00 0.00 N ATOM 26 CA PHE 4 7.846 -3.899 -33.170 1.00 0.00 C ATOM 27 CB PHE 4 7.976 -5.347 -33.647 1.00 0.00 C ATOM 28 CG PHE 4 6.987 -6.286 -33.006 1.00 0.00 C ATOM 29 CD1 PHE 4 7.028 -6.540 -31.620 1.00 0.00 C ATOM 30 CD2 PHE 4 5.981 -6.880 -33.788 1.00 0.00 C ATOM 31 CE1 PHE 4 6.116 -7.413 -31.032 1.00 0.00 C ATOM 32 CE2 PHE 4 5.028 -7.724 -33.180 1.00 0.00 C ATOM 33 CZ PHE 4 5.110 -8.007 -31.814 1.00 0.00 C ATOM 34 C PHE 4 8.591 -3.732 -31.847 1.00 0.00 C ATOM 35 O PHE 4 8.014 -3.653 -30.770 1.00 0.00 O ATOM 36 N LYS 5 9.910 -3.657 -31.938 1.00 0.00 N ATOM 37 CA LYS 5 10.797 -3.663 -30.780 1.00 0.00 C ATOM 38 CB LYS 5 12.221 -4.046 -31.224 1.00 0.00 C ATOM 39 CG LYS 5 12.578 -5.501 -30.963 1.00 0.00 C ATOM 40 CD LYS 5 14.096 -5.636 -30.968 1.00 0.00 C ATOM 41 CE LYS 5 14.557 -6.647 -29.937 1.00 0.00 C ATOM 42 NZ LYS 5 15.967 -6.446 -29.705 1.00 0.00 N ATOM 43 C LYS 5 10.944 -2.298 -30.116 1.00 0.00 C ATOM 44 O LYS 5 11.498 -2.215 -29.030 1.00 0.00 O ATOM 45 N ARG 6 10.518 -1.203 -30.749 1.00 0.00 N ATOM 46 CA ARG 6 10.625 0.083 -30.103 1.00 0.00 C ATOM 47 CB ARG 6 10.560 1.200 -31.142 1.00 0.00 C ATOM 48 CG ARG 6 10.453 2.600 -30.544 1.00 0.00 C ATOM 49 CD ARG 6 10.483 3.621 -31.652 1.00 0.00 C ATOM 50 NE ARG 6 10.139 4.935 -31.168 1.00 0.00 N ATOM 51 CZ ARG 6 10.999 5.876 -30.846 1.00 0.00 C ATOM 52 NH1 ARG 6 12.301 5.655 -30.897 1.00 0.00 H ATOM 53 NH2 ARG 6 10.570 7.054 -30.485 1.00 0.00 H ATOM 54 C ARG 6 9.498 0.261 -29.088 1.00 0.00 C ATOM 55 O ARG 6 9.714 0.934 -28.076 1.00 0.00 O ATOM 56 N VAL 7 8.314 -0.303 -29.346 1.00 0.00 N ATOM 57 CA VAL 7 7.223 -0.149 -28.387 1.00 0.00 C ATOM 58 CB VAL 7 5.872 -0.416 -29.071 1.00 0.00 C ATOM 59 CG1 VAL 7 4.690 -0.248 -28.111 1.00 0.00 C ATOM 60 CG2 VAL 7 5.688 0.567 -30.248 1.00 0.00 C ATOM 61 C VAL 7 7.427 -1.011 -27.134 1.00 0.00 C ATOM 62 O VAL 7 6.765 -0.771 -26.129 1.00 0.00 O ATOM 63 N ALA 8 8.355 -1.961 -27.154 1.00 0.00 N ATOM 64 CA ALA 8 8.498 -2.854 -26.025 1.00 0.00 C ATOM 65 CB ALA 8 9.508 -3.923 -26.369 1.00 0.00 C ATOM 66 C ALA 8 8.944 -2.115 -24.761 1.00 0.00 C ATOM 67 O ALA 8 9.664 -1.103 -24.814 1.00 0.00 O ATOM 68 N GLY 9 8.558 -2.654 -23.611 1.00 0.00 N ATOM 69 CA GLY 9 9.187 -2.329 -22.342 1.00 0.00 C ATOM 70 C GLY 9 10.672 -2.674 -22.395 1.00 0.00 C ATOM 71 O GLY 9 11.033 -3.711 -22.947 1.00 0.00 O ATOM 72 N ILE 10 11.531 -1.757 -21.950 1.00 0.00 N ATOM 73 CA ILE 10 12.972 -1.892 -22.187 1.00 0.00 C ATOM 74 CB ILE 10 13.629 -0.524 -22.514 1.00 0.00 C ATOM 75 CG1 ILE 10 14.542 0.131 -21.432 1.00 0.00 C ATOM 76 CG2 ILE 10 12.626 0.504 -23.023 1.00 0.00 C ATOM 77 CD1 ILE 10 13.788 1.002 -20.439 1.00 0.00 C ATOM 78 C ILE 10 13.667 -2.546 -21.027 1.00 0.00 C ATOM 79 O ILE 10 14.772 -3.064 -21.165 1.00 0.00 O ATOM 80 N LYS 11 13.084 -2.408 -19.837 1.00 0.00 N ATOM 81 CA LYS 11 13.579 -3.112 -18.691 1.00 0.00 C ATOM 82 CB LYS 11 12.954 -2.558 -17.423 1.00 0.00 C ATOM 83 CG LYS 11 13.262 -1.076 -17.216 1.00 0.00 C ATOM 84 CD LYS 11 14.672 -0.748 -16.697 1.00 0.00 C ATOM 85 CE LYS 11 15.880 -0.956 -17.608 1.00 0.00 C ATOM 86 NZ LYS 11 17.058 -1.179 -16.790 1.00 0.00 N ATOM 87 C LYS 11 13.330 -4.582 -18.816 1.00 0.00 C ATOM 88 O LYS 11 12.304 -4.964 -19.347 1.00 0.00 O ATOM 89 N ASP 12 14.274 -5.393 -18.329 1.00 0.00 N ATOM 90 CA ASP 12 14.093 -6.829 -18.366 1.00 0.00 C ATOM 91 CB ASP 12 15.383 -7.544 -17.914 1.00 0.00 C ATOM 92 CG ASP 12 15.408 -9.013 -18.343 1.00 0.00 C ATOM 93 OD1 ASP 12 14.797 -9.337 -19.415 1.00 0.00 O ATOM 94 OD2 ASP 12 15.839 -9.846 -17.546 1.00 0.00 O ATOM 95 C ASP 12 12.952 -7.205 -17.420 1.00 0.00 C ATOM 96 O ASP 12 12.609 -6.442 -16.505 1.00 0.00 O ATOM 97 N LYS 13 12.394 -8.391 -17.608 1.00 0.00 N ATOM 98 CA LYS 13 11.350 -8.900 -16.722 1.00 0.00 C ATOM 99 CB LYS 13 10.929 -10.297 -17.158 1.00 0.00 C ATOM 100 CG LYS 13 12.058 -11.322 -17.022 1.00 0.00 C ATOM 101 CD LYS 13 11.595 -12.623 -17.593 1.00 0.00 C ATOM 102 CE LYS 13 11.953 -12.638 -19.060 1.00 0.00 C ATOM 103 NZ LYS 13 13.280 -13.165 -19.192 1.00 0.00 N ATOM 104 C LYS 13 11.794 -9.003 -15.255 1.00 0.00 C ATOM 105 O LYS 13 11.036 -8.866 -14.308 1.00 0.00 O ATOM 106 N ALA 14 13.056 -9.315 -15.021 1.00 0.00 N ATOM 107 CA ALA 14 13.534 -9.449 -13.680 1.00 0.00 C ATOM 108 CB ALA 14 14.895 -10.063 -13.827 1.00 0.00 C ATOM 109 C ALA 14 13.610 -8.100 -12.960 1.00 0.00 C ATOM 110 O ALA 14 13.444 -8.068 -11.741 1.00 0.00 O ATOM 111 N ALA 15 13.776 -6.995 -13.707 1.00 0.00 N ATOM 112 CA ALA 15 13.762 -5.645 -13.166 1.00 0.00 C ATOM 113 CB ALA 15 14.255 -4.649 -14.186 1.00 0.00 C ATOM 114 C ALA 15 12.400 -5.194 -12.672 1.00 0.00 C ATOM 115 O ALA 15 12.335 -4.555 -11.618 1.00 0.00 O ATOM 116 N ILE 16 11.342 -5.556 -13.386 1.00 0.00 N ATOM 117 CA ILE 16 10.004 -5.250 -12.917 1.00 0.00 C ATOM 118 CB ILE 16 8.934 -5.556 -13.977 1.00 0.00 C ATOM 119 CG1 ILE 16 7.551 -5.015 -13.606 1.00 0.00 C ATOM 120 CG2 ILE 16 8.729 -7.024 -14.303 1.00 0.00 C ATOM 121 CD1 ILE 16 7.518 -3.658 -12.919 1.00 0.00 C ATOM 122 C ILE 16 9.688 -6.021 -11.638 1.00 0.00 C ATOM 123 O ILE 16 9.136 -5.450 -10.699 1.00 0.00 O ATOM 124 N LYS 17 10.104 -7.294 -11.598 1.00 0.00 N ATOM 125 CA LYS 17 9.965 -8.125 -10.425 1.00 0.00 C ATOM 126 CB LYS 17 10.507 -9.534 -10.729 1.00 0.00 C ATOM 127 CG LYS 17 10.664 -10.459 -9.507 1.00 0.00 C ATOM 128 CD LYS 17 11.589 -11.621 -9.717 1.00 0.00 C ATOM 129 CE LYS 17 12.062 -12.301 -8.411 1.00 0.00 C ATOM 130 NZ LYS 17 13.513 -12.221 -8.208 1.00 0.00 N ATOM 131 C LYS 17 10.711 -7.461 -9.265 1.00 0.00 C ATOM 132 O LYS 17 10.190 -7.389 -8.160 1.00 0.00 O ATOM 133 N THR 18 11.909 -6.970 -9.522 1.00 0.00 N ATOM 134 CA THR 18 12.686 -6.357 -8.465 1.00 0.00 C ATOM 135 CB THR 18 14.088 -6.130 -8.980 1.00 0.00 C ATOM 136 OG1 THR 18 14.656 -7.403 -9.195 1.00 0.00 O ATOM 137 CG2 THR 18 15.023 -5.497 -7.980 1.00 0.00 C ATOM 138 C THR 18 12.063 -5.046 -7.991 1.00 0.00 C ATOM 139 O THR 18 12.088 -4.772 -6.811 1.00 0.00 O ATOM 140 N LEU 19 11.446 -4.278 -8.890 1.00 0.00 N ATOM 141 CA LEU 19 10.794 -3.036 -8.529 1.00 0.00 C ATOM 142 CB LEU 19 10.378 -2.362 -9.859 1.00 0.00 C ATOM 143 CG LEU 19 11.112 -1.163 -10.435 1.00 0.00 C ATOM 144 CD1 LEU 19 10.221 -0.608 -11.556 1.00 0.00 C ATOM 145 CD2 LEU 19 11.412 -0.040 -9.497 1.00 0.00 C ATOM 146 C LEU 19 9.544 -3.307 -7.693 1.00 0.00 C ATOM 147 O LEU 19 9.317 -2.616 -6.693 1.00 0.00 O ATOM 148 N ILE 20 8.714 -4.288 -8.082 1.00 0.00 N ATOM 149 CA ILE 20 7.488 -4.630 -7.354 1.00 0.00 C ATOM 150 CB ILE 20 6.644 -5.651 -8.170 1.00 0.00 C ATOM 151 CG1 ILE 20 5.255 -5.839 -7.594 1.00 0.00 C ATOM 152 CG2 ILE 20 7.255 -7.020 -8.316 1.00 0.00 C ATOM 153 CD1 ILE 20 4.402 -4.696 -8.056 1.00 0.00 C ATOM 154 C ILE 20 7.801 -5.161 -5.957 1.00 0.00 C ATOM 155 O ILE 20 7.194 -4.746 -4.971 1.00 0.00 O ATOM 156 N SER 21 8.756 -6.084 -5.861 1.00 0.00 N ATOM 157 CA SER 21 9.151 -6.638 -4.578 1.00 0.00 C ATOM 158 CB SER 21 10.120 -7.786 -4.810 1.00 0.00 C ATOM 159 OG SER 21 11.267 -7.426 -5.533 1.00 0.00 O ATOM 160 C SER 21 9.842 -5.622 -3.707 1.00 0.00 C ATOM 161 O SER 21 9.689 -5.676 -2.493 1.00 0.00 O ATOM 162 N ALA 22 10.560 -4.701 -4.344 1.00 0.00 N ATOM 163 CA ALA 22 11.231 -3.625 -3.660 1.00 0.00 C ATOM 164 CB ALA 22 12.097 -2.845 -4.631 1.00 0.00 C ATOM 165 C ALA 22 10.243 -2.695 -3.011 1.00 0.00 C ATOM 166 O ALA 22 10.360 -2.374 -1.820 1.00 0.00 O ATOM 167 N ALA 23 9.218 -2.363 -3.760 1.00 0.00 N ATOM 168 CA ALA 23 8.216 -1.516 -3.233 1.00 0.00 C ATOM 169 CB ALA 23 7.357 -1.240 -4.373 1.00 0.00 C ATOM 170 C ALA 23 7.357 -2.160 -2.163 1.00 0.00 C ATOM 171 O ALA 23 6.938 -1.469 -1.238 1.00 0.00 O ATOM 172 N TYR 24 7.142 -3.462 -2.287 1.00 0.00 N ATOM 173 CA TYR 24 6.434 -4.253 -1.307 1.00 0.00 C ATOM 174 CB TYR 24 6.251 -5.684 -1.782 1.00 0.00 C ATOM 175 CG TYR 24 5.848 -6.657 -0.707 1.00 0.00 C ATOM 176 CD1 TYR 24 6.836 -7.334 0.052 1.00 0.00 C ATOM 177 CD2 TYR 24 4.512 -6.756 -0.325 1.00 0.00 C ATOM 178 CE1 TYR 24 6.503 -8.140 1.157 1.00 0.00 C ATOM 179 CE2 TYR 24 4.259 -7.549 0.787 1.00 0.00 C ATOM 180 CZ TYR 24 5.173 -8.273 1.511 1.00 0.00 C ATOM 181 OH TYR 24 4.721 -9.002 2.574 1.00 0.00 H ATOM 182 C TYR 24 7.166 -4.223 0.018 1.00 0.00 C ATOM 183 O TYR 24 6.534 -4.070 1.058 1.00 0.00 O ATOM 184 N ARG 25 8.495 -4.375 -0.012 1.00 0.00 N ATOM 185 CA ARG 25 9.241 -4.395 1.235 1.00 0.00 C ATOM 186 CB ARG 25 10.691 -4.745 0.965 1.00 0.00 C ATOM 187 CG ARG 25 11.645 -4.585 2.138 1.00 0.00 C ATOM 188 CD ARG 25 13.083 -4.781 1.732 1.00 0.00 C ATOM 189 NE ARG 25 13.994 -4.217 2.726 1.00 0.00 N ATOM 190 CZ ARG 25 15.281 -3.977 2.481 1.00 0.00 C ATOM 191 NH1 ARG 25 15.803 -4.206 1.299 1.00 0.00 H ATOM 192 NH2 ARG 25 16.100 -3.460 3.385 1.00 0.00 H ATOM 193 C ARG 25 9.174 -3.036 1.906 1.00 0.00 C ATOM 194 O ARG 25 9.087 -2.961 3.131 1.00 0.00 O ATOM 195 N GLN 26 9.246 -1.985 1.077 1.00 0.00 N ATOM 196 CA GLN 26 9.127 -0.619 1.527 1.00 0.00 C ATOM 197 CB GLN 26 9.309 0.394 0.380 1.00 0.00 C ATOM 198 CG GLN 26 10.731 0.780 0.076 1.00 0.00 C ATOM 199 CD GLN 26 11.370 1.749 1.058 1.00 0.00 C ATOM 200 OE1 GLN 26 10.881 2.104 2.113 1.00 0.00 O ATOM 201 NE2 GLN 26 12.569 2.149 0.727 1.00 0.00 N ATOM 202 C GLN 26 7.775 -0.365 2.159 1.00 0.00 C ATOM 203 O GLN 26 7.701 0.083 3.290 1.00 0.00 O ATOM 204 N ILE 27 6.722 -0.659 1.398 1.00 0.00 N ATOM 205 CA ILE 27 5.375 -0.362 1.833 1.00 0.00 C ATOM 206 CB ILE 27 4.356 -0.524 0.728 1.00 0.00 C ATOM 207 CG1 ILE 27 3.018 0.091 1.087 1.00 0.00 C ATOM 208 CG2 ILE 27 4.134 -1.943 0.245 1.00 0.00 C ATOM 209 CD1 ILE 27 2.925 1.405 1.823 1.00 0.00 C ATOM 210 C ILE 27 4.964 -1.084 3.075 1.00 0.00 C ATOM 211 O ILE 27 4.369 -0.490 3.963 1.00 0.00 O ATOM 212 N PHE 28 5.298 -2.377 3.116 1.00 0.00 N ATOM 213 CA PHE 28 4.899 -3.143 4.258 1.00 0.00 C ATOM 214 CB PHE 28 5.107 -4.627 4.086 1.00 0.00 C ATOM 215 CG PHE 28 3.867 -5.325 4.584 1.00 0.00 C ATOM 216 CD1 PHE 28 3.339 -5.170 5.886 1.00 0.00 C ATOM 217 CD2 PHE 28 3.222 -6.162 3.697 1.00 0.00 C ATOM 218 CE1 PHE 28 2.244 -5.888 6.332 1.00 0.00 C ATOM 219 CE2 PHE 28 2.074 -6.819 4.084 1.00 0.00 C ATOM 220 CZ PHE 28 1.573 -6.661 5.417 1.00 0.00 C ATOM 221 C PHE 28 5.634 -2.750 5.506 1.00 0.00 C ATOM 222 O PHE 28 5.073 -3.022 6.542 1.00 0.00 O ATOM 223 N GLU 29 6.811 -2.150 5.440 1.00 0.00 N ATOM 224 CA GLU 29 7.579 -1.746 6.610 1.00 0.00 C ATOM 225 CB GLU 29 6.731 -1.443 7.865 1.00 0.00 C ATOM 226 CG GLU 29 6.998 -0.071 8.394 1.00 0.00 C ATOM 227 CD GLU 29 8.397 0.150 8.928 1.00 0.00 C ATOM 228 OE1 GLU 29 9.373 0.390 8.176 1.00 0.00 O ATOM 229 OE2 GLU 29 8.528 -0.039 10.130 1.00 0.00 O ATOM 230 C GLU 29 8.683 -2.761 6.908 1.00 0.00 C ATOM 231 O GLU 29 9.006 -3.634 6.096 1.00 0.00 O ATOM 232 N ARG 30 9.254 -2.649 8.113 1.00 0.00 N ATOM 233 CA ARG 30 10.400 -3.427 8.520 1.00 0.00 C ATOM 234 CB ARG 30 11.504 -2.506 9.024 1.00 0.00 C ATOM 235 CG ARG 30 11.281 -1.789 10.345 1.00 0.00 C ATOM 236 CD ARG 30 12.234 -0.619 10.503 1.00 0.00 C ATOM 237 NE ARG 30 11.824 0.511 9.694 1.00 0.00 N ATOM 238 CZ ARG 30 12.490 1.652 9.635 1.00 0.00 C ATOM 239 NH1 ARG 30 13.590 1.888 10.342 1.00 0.00 H ATOM 240 NH2 ARG 30 12.046 2.596 8.863 1.00 0.00 H ATOM 241 C ARG 30 10.064 -4.512 9.511 1.00 0.00 C ATOM 242 O ARG 30 10.963 -5.205 9.999 1.00 0.00 O ATOM 243 N ASP 31 8.786 -4.677 9.793 1.00 0.00 N ATOM 244 CA ASP 31 8.371 -5.600 10.817 1.00 0.00 C ATOM 245 CB ASP 31 7.185 -5.016 11.547 1.00 0.00 C ATOM 246 CG ASP 31 7.521 -4.584 12.961 1.00 0.00 C ATOM 247 OD1 ASP 31 8.102 -5.394 13.717 1.00 0.00 O ATOM 248 OD2 ASP 31 7.171 -3.430 13.261 1.00 0.00 O ATOM 249 C ASP 31 7.930 -6.937 10.259 1.00 0.00 C ATOM 250 O ASP 31 8.365 -7.914 10.833 1.00 0.00 O ATOM 251 N ILE 32 7.077 -7.023 9.237 1.00 0.00 N ATOM 252 CA ILE 32 6.561 -8.298 8.681 1.00 0.00 C ATOM 253 CB ILE 32 5.290 -8.013 7.890 1.00 0.00 C ATOM 254 CG1 ILE 32 4.598 -9.252 7.290 1.00 0.00 C ATOM 255 CG2 ILE 32 5.596 -6.979 6.814 1.00 0.00 C ATOM 256 CD1 ILE 32 3.213 -9.015 6.758 1.00 0.00 C ATOM 257 C ILE 32 7.539 -8.984 7.712 1.00 0.00 C ATOM 258 O ILE 32 7.250 -10.054 7.157 1.00 0.00 O ATOM 259 N ALA 33 8.742 -8.455 7.552 1.00 0.00 N ATOM 260 CA ALA 33 9.711 -9.137 6.728 1.00 0.00 C ATOM 261 CB ALA 33 10.926 -8.266 6.526 1.00 0.00 C ATOM 262 C ALA 33 10.207 -10.452 7.317 1.00 0.00 C ATOM 263 O ALA 33 10.607 -11.295 6.525 1.00 0.00 O ATOM 264 N PRO 34 10.208 -10.706 8.644 1.00 0.00 N ATOM 265 CA PRO 34 10.517 -12.097 9.082 1.00 0.00 C ATOM 266 CB PRO 34 10.860 -11.833 10.554 1.00 0.00 C ATOM 267 CG PRO 34 9.715 -10.976 11.033 1.00 0.00 C ATOM 268 CD PRO 34 9.568 -10.053 9.810 1.00 0.00 C ATOM 269 C PRO 34 9.291 -13.075 8.947 1.00 0.00 C ATOM 270 O PRO 34 8.299 -12.200 8.924 1.00 0.00 O ATOM 271 N TYR 35 8.032 -13.197 8.915 1.00 0.00 N ATOM 272 CA TYR 35 6.971 -14.111 8.956 1.00 0.00 C ATOM 273 CB TYR 35 5.789 -13.345 9.525 1.00 0.00 C ATOM 274 CG TYR 35 4.514 -14.108 9.652 1.00 0.00 C ATOM 275 CD1 TYR 35 3.338 -13.466 9.271 1.00 0.00 C ATOM 276 CD2 TYR 35 4.468 -15.405 10.138 1.00 0.00 C ATOM 277 CE1 TYR 35 2.097 -14.091 9.464 1.00 0.00 C ATOM 278 CE2 TYR 35 3.235 -16.064 10.317 1.00 0.00 C ATOM 279 CZ TYR 35 2.048 -15.390 10.001 1.00 0.00 C ATOM 280 OH TYR 35 0.857 -15.999 10.213 1.00 0.00 H ATOM 281 C TYR 35 6.815 -14.535 7.518 1.00 0.00 C ATOM 282 O TYR 35 6.811 -15.735 7.295 1.00 0.00 O ATOM 283 N ILE 36 6.818 -13.596 6.549 1.00 0.00 N ATOM 284 CA ILE 36 6.499 -13.975 5.194 1.00 0.00 C ATOM 285 CB ILE 36 6.224 -12.742 4.277 1.00 0.00 C ATOM 286 CG1 ILE 36 7.464 -11.863 4.086 1.00 0.00 C ATOM 287 CG2 ILE 36 5.000 -12.000 4.768 1.00 0.00 C ATOM 288 CD1 ILE 36 7.256 -10.766 3.064 1.00 0.00 C ATOM 289 C ILE 36 7.377 -14.940 4.386 1.00 0.00 C ATOM 290 O ILE 36 6.769 -15.088 3.369 1.00 0.00 O ATOM 291 N ALA 37 7.433 -16.223 4.530 1.00 0.00 N ATOM 292 CA ALA 37 8.439 -17.003 3.813 1.00 0.00 C ATOM 293 CB ALA 37 8.666 -18.045 4.842 1.00 0.00 C ATOM 294 C ALA 37 8.000 -17.709 2.524 1.00 0.00 C ATOM 295 O ALA 37 8.192 -18.926 2.441 1.00 0.00 O ATOM 296 N GLN 38 7.352 -17.035 1.557 1.00 0.00 N ATOM 297 CA GLN 38 6.897 -17.631 0.279 1.00 0.00 C ATOM 298 CB GLN 38 8.104 -18.300 -0.414 1.00 0.00 C ATOM 299 CG GLN 38 7.796 -19.153 -1.638 1.00 0.00 C ATOM 300 CD GLN 38 8.403 -20.535 -1.574 1.00 0.00 C ATOM 301 OE1 GLN 38 9.460 -20.779 -2.142 1.00 0.00 O ATOM 302 NE2 GLN 38 7.779 -21.482 -0.894 1.00 0.00 N ATOM 303 C GLN 38 5.690 -18.561 0.446 1.00 0.00 C ATOM 304 O GLN 38 4.965 -18.837 -0.508 1.00 0.00 O ATOM 305 N ASN 39 5.516 -19.118 1.633 1.00 0.00 N ATOM 306 CA ASN 39 4.465 -20.089 1.862 1.00 0.00 C ATOM 307 CB ASN 39 4.921 -21.156 2.847 1.00 0.00 C ATOM 308 CG ASN 39 5.950 -22.092 2.263 1.00 0.00 C ATOM 309 OD1 ASN 39 6.070 -22.266 1.053 1.00 0.00 O ATOM 310 ND2 ASN 39 6.730 -22.700 3.118 1.00 0.00 N ATOM 311 C ASN 39 3.263 -19.461 2.535 1.00 0.00 C ATOM 312 O ASN 39 2.189 -20.065 2.519 1.00 0.00 O ATOM 313 N GLU 40 3.462 -18.334 3.217 1.00 0.00 N ATOM 314 CA GLU 40 2.346 -17.571 3.739 1.00 0.00 C ATOM 315 CB GLU 40 2.780 -16.606 4.850 1.00 0.00 C ATOM 316 CG GLU 40 1.579 -16.099 5.722 1.00 0.00 C ATOM 317 CD GLU 40 0.323 -16.977 5.874 1.00 0.00 C ATOM 318 OE1 GLU 40 0.445 -18.107 6.401 1.00 0.00 O ATOM 319 OE2 GLU 40 -0.747 -16.544 5.385 1.00 0.00 O ATOM 320 C GLU 40 1.677 -16.794 2.619 1.00 0.00 C ATOM 321 O GLU 40 2.308 -16.427 1.631 1.00 0.00 O ATOM 322 N PHE 41 0.398 -16.488 2.848 1.00 0.00 N ATOM 323 CA PHE 41 -0.364 -15.704 1.944 1.00 0.00 C ATOM 324 CB PHE 41 -1.878 -15.931 2.133 1.00 0.00 C ATOM 325 CG PHE 41 -2.349 -17.259 1.565 1.00 0.00 C ATOM 326 CD1 PHE 41 -3.304 -18.060 2.207 1.00 0.00 C ATOM 327 CD2 PHE 41 -1.784 -17.735 0.367 1.00 0.00 C ATOM 328 CE1 PHE 41 -3.625 -19.323 1.646 1.00 0.00 C ATOM 329 CE2 PHE 41 -2.126 -18.955 -0.214 1.00 0.00 C ATOM 330 CZ PHE 41 -3.046 -19.758 0.444 1.00 0.00 C ATOM 331 C PHE 41 -0.045 -14.255 2.151 1.00 0.00 C ATOM 332 O PHE 41 -0.619 -13.491 1.475 1.00 0.00 O ATOM 333 N SER 42 0.915 -13.766 2.932 1.00 0.00 N ATOM 334 CA SER 42 1.480 -12.415 2.801 1.00 0.00 C ATOM 335 CB SER 42 2.003 -12.142 1.304 1.00 0.00 C ATOM 336 OG SER 42 1.688 -12.942 0.201 1.00 0.00 O ATOM 337 C SER 42 0.548 -11.267 3.206 1.00 0.00 C ATOM 338 O SER 42 -0.034 -10.796 2.274 1.00 0.00 O ATOM 339 N GLY 43 0.877 -10.305 4.055 1.00 0.00 N ATOM 340 CA GLY 43 -0.125 -9.270 4.385 1.00 0.00 C ATOM 341 C GLY 43 -1.057 -8.563 3.370 1.00 0.00 C ATOM 342 O GLY 43 -2.234 -8.431 3.663 1.00 0.00 O ATOM 343 N TRP 44 -0.596 -8.195 2.167 1.00 0.00 N ATOM 344 CA TRP 44 -1.464 -7.777 1.078 1.00 0.00 C ATOM 345 CB TRP 44 -0.684 -7.303 -0.142 1.00 0.00 C ATOM 346 CG TRP 44 0.098 -6.107 0.237 1.00 0.00 C ATOM 347 CD1 TRP 44 1.354 -6.107 0.663 1.00 0.00 C ATOM 348 CD2 TRP 44 -0.310 -4.759 0.364 1.00 0.00 C ATOM 349 NE1 TRP 44 1.825 -4.882 1.029 1.00 0.00 N ATOM 350 CE2 TRP 44 0.806 -4.010 0.832 1.00 0.00 C ATOM 351 CE3 TRP 44 -1.477 -4.078 0.029 1.00 0.00 C ATOM 352 CZ2 TRP 44 0.760 -2.669 1.048 1.00 0.00 C ATOM 353 CZ3 TRP 44 -1.496 -2.693 0.182 1.00 0.00 C ATOM 354 CH2 TRP 44 -0.388 -2.000 0.719 1.00 0.00 H ATOM 355 C TRP 44 -2.498 -8.822 0.741 1.00 0.00 C ATOM 356 O TRP 44 -3.641 -8.424 0.619 1.00 0.00 O ATOM 357 N GLU 45 -2.211 -10.123 0.769 1.00 0.00 N ATOM 358 CA GLU 45 -3.214 -11.104 0.358 1.00 0.00 C ATOM 359 CB GLU 45 -2.619 -12.436 0.307 1.00 0.00 C ATOM 360 CG GLU 45 -3.018 -13.414 -0.759 1.00 0.00 C ATOM 361 CD GLU 45 -4.313 -14.171 -0.564 1.00 0.00 C ATOM 362 OE1 GLU 45 -5.337 -13.458 -0.659 1.00 0.00 O ATOM 363 OE2 GLU 45 -4.277 -15.401 -0.390 1.00 0.00 O ATOM 364 C GLU 45 -4.391 -11.176 1.315 1.00 0.00 C ATOM 365 O GLU 45 -5.529 -11.043 0.883 1.00 0.00 O ATOM 366 N SER 46 -4.115 -11.235 2.629 1.00 0.00 N ATOM 367 CA SER 46 -5.187 -11.251 3.594 1.00 0.00 C ATOM 368 CB SER 46 -4.623 -11.419 5.008 1.00 0.00 C ATOM 369 OG SER 46 -3.798 -10.325 5.335 1.00 0.00 O ATOM 370 C SER 46 -6.057 -9.999 3.481 1.00 0.00 C ATOM 371 O SER 46 -7.261 -10.104 3.626 1.00 0.00 O ATOM 372 N LYS 47 -5.449 -8.864 3.124 1.00 0.00 N ATOM 373 CA LYS 47 -6.148 -7.625 2.904 1.00 0.00 C ATOM 374 CB LYS 47 -5.167 -6.464 2.848 1.00 0.00 C ATOM 375 CG LYS 47 -4.450 -6.288 4.176 1.00 0.00 C ATOM 376 CD LYS 47 -5.359 -5.974 5.354 1.00 0.00 C ATOM 377 CE LYS 47 -4.644 -6.095 6.683 1.00 0.00 C ATOM 378 NZ LYS 47 -5.546 -6.142 7.851 1.00 0.00 N ATOM 379 C LYS 47 -7.026 -7.622 1.666 1.00 0.00 C ATOM 380 O LYS 47 -8.141 -7.137 1.750 1.00 0.00 O ATOM 381 N LEU 48 -6.597 -8.196 0.554 1.00 0.00 N ATOM 382 CA LEU 48 -7.540 -8.304 -0.588 1.00 0.00 C ATOM 383 CB LEU 48 -6.890 -8.880 -1.780 1.00 0.00 C ATOM 384 CG LEU 48 -7.321 -9.106 -3.218 1.00 0.00 C ATOM 385 CD1 LEU 48 -7.925 -10.482 -3.294 1.00 0.00 C ATOM 386 CD2 LEU 48 -8.152 -7.933 -3.678 1.00 0.00 C ATOM 387 C LEU 48 -8.644 -9.255 -0.322 1.00 0.00 C ATOM 388 O LEU 48 -9.752 -8.986 -0.781 1.00 0.00 O ATOM 389 N GLY 49 -8.342 -10.340 0.381 1.00 0.00 N ATOM 390 CA GLY 49 -9.346 -11.345 0.576 1.00 0.00 C ATOM 391 C GLY 49 -10.378 -10.828 1.556 1.00 0.00 C ATOM 392 O GLY 49 -11.572 -10.930 1.340 1.00 0.00 O ATOM 393 N ASN 50 -9.927 -10.172 2.608 1.00 0.00 N ATOM 394 CA ASN 50 -10.839 -9.599 3.558 1.00 0.00 C ATOM 395 CB ASN 50 -10.136 -9.488 4.934 1.00 0.00 C ATOM 396 CG ASN 50 -10.488 -10.748 5.635 1.00 0.00 C ATOM 397 OD1 ASN 50 -11.570 -10.851 6.161 1.00 0.00 O ATOM 398 ND2 ASN 50 -9.661 -11.771 5.528 1.00 0.00 N ATOM 399 C ASN 50 -11.061 -8.192 3.104 1.00 0.00 C ATOM 400 O ASN 50 -10.093 -7.568 3.424 1.00 0.00 O ATOM 401 N GLY 51 -11.501 -7.828 1.931 1.00 0.00 N ATOM 402 CA GLY 51 -11.872 -6.444 1.598 1.00 0.00 C ATOM 403 C GLY 51 -11.257 -5.168 2.244 1.00 0.00 C ATOM 404 O GLY 51 -11.859 -4.110 2.147 1.00 0.00 O ATOM 405 N GLU 52 -10.079 -5.210 2.873 1.00 0.00 N ATOM 406 CA GLU 52 -9.480 -4.108 3.583 1.00 0.00 C ATOM 407 CB GLU 52 -8.517 -4.617 4.660 1.00 0.00 C ATOM 408 CG GLU 52 -8.076 -3.432 5.550 1.00 0.00 C ATOM 409 CD GLU 52 -8.076 -3.735 7.045 1.00 0.00 C ATOM 410 OE1 GLU 52 -8.134 -2.724 7.834 1.00 0.00 O ATOM 411 OE2 GLU 52 -7.819 -4.870 7.428 1.00 0.00 O ATOM 412 C GLU 52 -8.673 -3.292 2.570 1.00 0.00 C ATOM 413 O GLU 52 -8.493 -2.098 2.770 1.00 0.00 O ATOM 414 N ILE 53 -8.136 -3.928 1.536 1.00 0.00 N ATOM 415 CA ILE 53 -7.354 -3.254 0.520 1.00 0.00 C ATOM 416 CB ILE 53 -5.867 -3.422 0.874 1.00 0.00 C ATOM 417 CG1 ILE 53 -5.459 -2.586 2.096 1.00 0.00 C ATOM 418 CG2 ILE 53 -4.957 -3.106 -0.267 1.00 0.00 C ATOM 419 CD1 ILE 53 -4.096 -2.946 2.603 1.00 0.00 C ATOM 420 C ILE 53 -7.690 -3.885 -0.811 1.00 0.00 C ATOM 421 O ILE 53 -7.682 -5.111 -0.898 1.00 0.00 O ATOM 422 N THR 54 -7.886 -3.093 -1.861 1.00 0.00 N ATOM 423 CA THR 54 -8.032 -3.635 -3.187 1.00 0.00 C ATOM 424 CB THR 54 -9.072 -2.806 -3.995 1.00 0.00 C ATOM 425 OG1 THR 54 -8.435 -1.650 -4.552 1.00 0.00 O ATOM 426 CG2 THR 54 -9.972 -3.826 -4.830 1.00 0.00 C ATOM 427 C THR 54 -6.662 -3.672 -3.898 1.00 0.00 C ATOM 428 O THR 54 -5.638 -3.175 -3.415 1.00 0.00 O ATOM 429 N VAL 55 -6.648 -4.230 -5.113 1.00 0.00 N ATOM 430 CA VAL 55 -5.494 -4.231 -5.990 1.00 0.00 C ATOM 431 CB VAL 55 -5.762 -5.035 -7.274 1.00 0.00 C ATOM 432 CG1 VAL 55 -4.614 -5.068 -8.256 1.00 0.00 C ATOM 433 CG2 VAL 55 -6.170 -6.446 -6.821 1.00 0.00 C ATOM 434 C VAL 55 -5.022 -2.818 -6.303 1.00 0.00 C ATOM 435 O VAL 55 -3.809 -2.613 -6.261 1.00 0.00 O ATOM 436 N LYS 56 -5.914 -1.839 -6.527 1.00 0.00 N ATOM 437 CA LYS 56 -5.503 -0.452 -6.699 1.00 0.00 C ATOM 438 CB LYS 56 -6.724 0.484 -6.894 1.00 0.00 C ATOM 439 CG LYS 56 -6.916 1.598 -5.815 1.00 0.00 C ATOM 440 CD LYS 56 -6.940 3.012 -6.316 1.00 0.00 C ATOM 441 CE LYS 56 -6.705 4.000 -5.159 1.00 0.00 C ATOM 442 NZ LYS 56 -7.175 5.323 -5.530 1.00 0.00 N ATOM 443 C LYS 56 -4.645 0.059 -5.521 1.00 0.00 C ATOM 444 O LYS 56 -3.919 1.044 -5.610 1.00 0.00 O ATOM 445 N GLU 57 -4.982 -0.355 -4.315 1.00 0.00 N ATOM 446 CA GLU 57 -4.286 0.275 -3.202 1.00 0.00 C ATOM 447 CB GLU 57 -5.156 0.087 -2.004 1.00 0.00 C ATOM 448 CG GLU 57 -5.084 1.240 -1.028 1.00 0.00 C ATOM 449 CD GLU 57 -6.096 2.351 -1.275 1.00 0.00 C ATOM 450 OE1 GLU 57 -7.048 2.071 -2.105 1.00 0.00 O ATOM 451 OE2 GLU 57 -6.032 3.394 -0.666 1.00 0.00 O ATOM 452 C GLU 57 -2.919 -0.428 -3.044 1.00 0.00 C ATOM 453 O GLU 57 -1.921 0.188 -2.714 1.00 0.00 O ATOM 454 N PHE 58 -2.861 -1.729 -3.409 1.00 0.00 N ATOM 455 CA PHE 58 -1.604 -2.454 -3.504 1.00 0.00 C ATOM 456 CB PHE 58 -1.846 -3.904 -3.910 1.00 0.00 C ATOM 457 CG PHE 58 -0.599 -4.771 -3.968 1.00 0.00 C ATOM 458 CD1 PHE 58 0.139 -4.999 -2.816 1.00 0.00 C ATOM 459 CD2 PHE 58 -0.173 -5.430 -5.125 1.00 0.00 C ATOM 460 CE1 PHE 58 1.239 -5.864 -2.799 1.00 0.00 C ATOM 461 CE2 PHE 58 0.925 -6.283 -5.151 1.00 0.00 C ATOM 462 CZ PHE 58 1.649 -6.498 -3.976 1.00 0.00 C ATOM 463 C PHE 58 -0.648 -1.809 -4.497 1.00 0.00 C ATOM 464 O PHE 58 0.528 -1.646 -4.180 1.00 0.00 O ATOM 465 N ILE 59 -1.155 -1.387 -5.669 1.00 0.00 N ATOM 466 CA ILE 59 -0.380 -0.648 -6.658 1.00 0.00 C ATOM 467 CB ILE 59 -1.234 -0.250 -7.892 1.00 0.00 C ATOM 468 CG1 ILE 59 -2.263 0.777 -7.650 1.00 0.00 C ATOM 469 CG2 ILE 59 -1.823 -1.500 -8.566 1.00 0.00 C ATOM 470 CD1 ILE 59 -3.127 1.310 -8.760 1.00 0.00 C ATOM 471 C ILE 59 0.270 0.591 -6.051 1.00 0.00 C ATOM 472 O ILE 59 1.451 0.828 -6.285 1.00 0.00 O ATOM 473 N GLU 60 -0.524 1.340 -5.267 1.00 0.00 N ATOM 474 CA GLU 60 -0.134 2.606 -4.682 1.00 0.00 C ATOM 475 CB GLU 60 -1.299 3.227 -3.893 1.00 0.00 C ATOM 476 CG GLU 60 -2.263 4.141 -4.661 1.00 0.00 C ATOM 477 CD GLU 60 -2.854 5.286 -3.825 1.00 0.00 C ATOM 478 OE1 GLU 60 -2.232 5.730 -2.862 1.00 0.00 O ATOM 479 OE2 GLU 60 -3.948 5.778 -4.255 1.00 0.00 O ATOM 480 C GLU 60 0.996 2.331 -3.716 1.00 0.00 C ATOM 481 O GLU 60 2.063 2.926 -3.799 1.00 0.00 O ATOM 482 N GLY 61 0.840 1.290 -2.902 1.00 0.00 N ATOM 483 CA GLY 61 1.808 0.994 -1.909 1.00 0.00 C ATOM 484 C GLY 61 3.102 0.444 -2.493 1.00 0.00 C ATOM 485 O GLY 61 4.182 0.765 -2.032 1.00 0.00 O ATOM 486 N LEU 62 3.019 -0.302 -3.589 1.00 0.00 N ATOM 487 CA LEU 62 4.221 -0.687 -4.296 1.00 0.00 C ATOM 488 CB LEU 62 3.888 -1.669 -5.408 1.00 0.00 C ATOM 489 CG LEU 62 3.842 -3.178 -5.163 1.00 0.00 C ATOM 490 CD1 LEU 62 3.866 -3.691 -3.746 1.00 0.00 C ATOM 491 CD2 LEU 62 2.622 -3.645 -5.944 1.00 0.00 C ATOM 492 C LEU 62 4.827 0.550 -5.024 1.00 0.00 C ATOM 493 O LEU 62 6.014 0.741 -5.192 1.00 0.00 O ATOM 494 N GLY 63 4.041 1.465 -5.536 1.00 0.00 N ATOM 495 CA GLY 63 4.602 2.694 -6.055 1.00 0.00 C ATOM 496 C GLY 63 5.464 3.630 -5.216 1.00 0.00 C ATOM 497 O GLY 63 5.725 4.722 -5.663 1.00 0.00 O ATOM 498 N TYR 64 6.184 3.160 -4.214 1.00 0.00 N ATOM 499 CA TYR 64 6.845 3.924 -3.203 1.00 0.00 C ATOM 500 CB TYR 64 7.679 2.933 -2.423 1.00 0.00 C ATOM 501 CG TYR 64 9.103 2.781 -2.871 1.00 0.00 C ATOM 502 CD1 TYR 64 9.414 1.868 -3.888 1.00 0.00 C ATOM 503 CD2 TYR 64 10.119 3.571 -2.317 1.00 0.00 C ATOM 504 CE1 TYR 64 10.753 1.695 -4.220 1.00 0.00 C ATOM 505 CE2 TYR 64 11.453 3.409 -2.706 1.00 0.00 C ATOM 506 CZ TYR 64 11.786 2.430 -3.644 1.00 0.00 C ATOM 507 OH TYR 64 13.081 2.195 -3.994 1.00 0.00 H ATOM 508 C TYR 64 7.620 5.202 -3.539 1.00 0.00 C ATOM 509 O TYR 64 7.622 6.122 -2.726 1.00 0.00 O ATOM 510 N SER 65 8.341 5.228 -4.667 1.00 0.00 N ATOM 511 CA SER 65 9.051 6.419 -5.030 1.00 0.00 C ATOM 512 CB SER 65 10.395 5.976 -5.586 1.00 0.00 C ATOM 513 OG SER 65 10.364 5.367 -6.848 1.00 0.00 O ATOM 514 C SER 65 8.231 7.233 -6.034 1.00 0.00 C ATOM 515 O SER 65 7.247 6.773 -6.611 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 498 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 59.14 74.2 124 100.0 124 ARMSMC SECONDARY STRUCTURE . . 40.19 86.6 82 100.0 82 ARMSMC SURFACE . . . . . . . . 65.32 70.0 90 100.0 90 ARMSMC BURIED . . . . . . . . 38.22 85.3 34 100.0 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.01 30.0 50 100.0 50 ARMSSC1 RELIABLE SIDE CHAINS . 91.41 27.7 47 100.0 47 ARMSSC1 SECONDARY STRUCTURE . . 87.44 31.2 32 100.0 32 ARMSSC1 SURFACE . . . . . . . . 93.13 28.2 39 100.0 39 ARMSSC1 BURIED . . . . . . . . 77.93 36.4 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.78 26.8 41 100.0 41 ARMSSC2 RELIABLE SIDE CHAINS . 74.37 27.8 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 81.27 25.9 27 100.0 27 ARMSSC2 SURFACE . . . . . . . . 76.14 26.7 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 85.57 27.3 11 100.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 76.40 23.5 17 100.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 66.95 26.7 15 100.0 15 ARMSSC3 SECONDARY STRUCTURE . . 87.17 18.2 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 78.17 25.0 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 38.15 0.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 67.23 44.4 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 67.23 44.4 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 60.95 40.0 5 100.0 5 ARMSSC4 SURFACE . . . . . . . . 67.23 44.4 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.43 (Number of atoms: 63) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.43 63 100.0 63 CRMSCA CRN = ALL/NP . . . . . 0.1497 CRMSCA SECONDARY STRUCTURE . . 6.97 41 100.0 41 CRMSCA SURFACE . . . . . . . . 10.32 46 100.0 46 CRMSCA BURIED . . . . . . . . 6.46 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.44 309 100.0 309 CRMSMC SECONDARY STRUCTURE . . 7.13 201 100.0 201 CRMSMC SURFACE . . . . . . . . 10.27 226 100.0 226 CRMSMC BURIED . . . . . . . . 6.67 83 100.0 83 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 11.02 246 32.8 750 CRMSSC RELIABLE SIDE CHAINS . 11.01 226 31.0 730 CRMSSC SECONDARY STRUCTURE . . 8.11 158 32.6 484 CRMSSC SURFACE . . . . . . . . 12.02 184 33.2 554 CRMSSC BURIED . . . . . . . . 7.24 62 31.6 196 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 10.22 498 49.7 1002 CRMSALL SECONDARY STRUCTURE . . 7.63 322 49.7 648 CRMSALL SURFACE . . . . . . . . 11.14 368 49.9 738 CRMSALL BURIED . . . . . . . . 7.01 130 49.2 264 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.108 1.000 0.500 63 100.0 63 ERRCA SECONDARY STRUCTURE . . 6.041 1.000 0.500 41 100.0 41 ERRCA SURFACE . . . . . . . . 9.051 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 5.556 1.000 0.500 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.116 1.000 0.500 309 100.0 309 ERRMC SECONDARY STRUCTURE . . 6.146 1.000 0.500 201 100.0 201 ERRMC SURFACE . . . . . . . . 9.009 1.000 0.500 226 100.0 226 ERRMC BURIED . . . . . . . . 5.687 1.000 0.500 83 100.0 83 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.313 1.000 0.500 246 32.8 750 ERRSC RELIABLE SIDE CHAINS . 9.259 1.000 0.500 226 31.0 730 ERRSC SECONDARY STRUCTURE . . 6.972 1.000 0.500 158 32.6 484 ERRSC SURFACE . . . . . . . . 10.341 1.000 0.500 184 33.2 554 ERRSC BURIED . . . . . . . . 6.262 1.000 0.500 62 31.6 196 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.688 1.000 0.500 498 49.7 1002 ERRALL SECONDARY STRUCTURE . . 6.546 1.000 0.500 322 49.7 648 ERRALL SURFACE . . . . . . . . 9.643 1.000 0.500 368 49.9 738 ERRALL BURIED . . . . . . . . 5.984 1.000 0.500 130 49.2 264 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 3 9 18 46 63 63 DISTCA CA (P) 0.00 4.76 14.29 28.57 73.02 63 DISTCA CA (RMS) 0.00 1.40 2.22 3.28 6.23 DISTCA ALL (N) 1 26 59 139 336 498 1002 DISTALL ALL (P) 0.10 2.59 5.89 13.87 33.53 1002 DISTALL ALL (RMS) 0.31 1.54 2.16 3.41 6.07 DISTALL END of the results output