####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 63 ( 498), selected 63 , name T0553TS020_1-D1 # Molecule2: number of CA atoms 63 ( 1002), selected 63 , name T0553-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0553TS020_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 7 - 31 4.81 15.65 LONGEST_CONTINUOUS_SEGMENT: 25 8 - 32 5.00 16.57 LONGEST_CONTINUOUS_SEGMENT: 25 9 - 33 4.73 20.54 LCS_AVERAGE: 32.73 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 12 - 22 1.93 17.64 LONGEST_CONTINUOUS_SEGMENT: 11 52 - 62 1.98 18.17 LCS_AVERAGE: 11.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 12 - 19 0.89 19.25 LONGEST_CONTINUOUS_SEGMENT: 8 52 - 59 0.99 19.92 LCS_AVERAGE: 8.19 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 63 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 3 V 3 3 4 12 0 3 3 3 4 5 6 6 8 9 9 11 12 12 12 13 15 16 18 19 LCS_GDT F 4 F 4 3 4 12 1 3 3 3 4 5 6 7 8 9 9 11 12 12 13 15 16 17 19 19 LCS_GDT K 5 K 5 3 4 13 0 4 4 4 4 5 6 7 8 9 10 11 12 13 14 16 22 25 27 28 LCS_GDT R 6 R 6 3 4 20 2 4 4 4 5 5 7 7 9 9 11 12 12 15 18 21 29 33 37 37 LCS_GDT V 7 V 7 4 5 25 3 4 4 4 5 5 7 12 14 19 20 23 26 30 32 34 35 38 39 41 LCS_GDT A 8 A 8 4 5 25 3 4 6 8 10 13 14 15 17 19 24 25 27 30 32 34 35 38 39 41 LCS_GDT G 9 G 9 4 5 25 3 4 4 8 10 13 14 15 17 19 24 25 27 30 32 34 35 38 39 41 LCS_GDT I 10 I 10 4 5 25 3 5 7 7 9 11 14 16 18 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT K 11 K 11 3 5 25 3 3 3 6 10 12 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT D 12 D 12 8 11 25 7 7 8 8 11 12 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT K 13 K 13 8 11 25 7 7 8 8 11 12 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT A 14 A 14 8 11 25 7 7 8 8 11 11 13 16 19 21 23 24 25 27 29 33 35 37 39 41 LCS_GDT A 15 A 15 8 11 25 7 7 8 8 11 11 13 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT I 16 I 16 8 11 25 7 7 8 8 11 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT K 17 K 17 8 11 25 7 7 8 8 11 11 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT T 18 T 18 8 11 25 7 7 8 8 11 12 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT L 19 L 19 8 11 25 4 4 8 8 11 12 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT I 20 I 20 5 11 25 4 5 7 8 11 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT S 21 S 21 5 11 25 4 5 7 8 11 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT A 22 A 22 5 11 25 3 5 7 8 11 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT A 23 A 23 5 9 25 3 5 7 8 10 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT Y 24 Y 24 6 9 25 4 6 7 8 10 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT R 25 R 25 6 9 25 4 6 6 7 9 11 13 15 19 21 23 24 27 30 32 34 35 38 39 41 LCS_GDT Q 26 Q 26 6 9 25 4 6 6 7 9 11 13 15 17 20 23 23 25 26 29 32 35 37 39 41 LCS_GDT I 27 I 27 6 9 25 4 6 6 7 9 11 13 15 18 21 23 23 25 28 30 33 35 38 39 41 LCS_GDT F 28 F 28 6 9 25 3 6 7 8 10 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT E 29 E 29 6 9 25 3 6 6 7 9 11 13 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT R 30 R 30 3 4 25 3 3 6 7 10 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT D 31 D 31 3 4 25 3 3 3 4 4 5 7 10 16 18 22 25 27 30 32 34 35 38 39 41 LCS_GDT I 32 I 32 4 4 25 3 4 4 4 4 7 8 10 15 16 19 20 22 27 31 34 35 38 39 41 LCS_GDT A 33 A 33 4 4 25 3 4 4 4 4 6 8 10 13 15 19 20 22 26 28 31 33 35 38 41 LCS_GDT P 34 P 34 4 4 19 3 4 4 4 4 5 6 8 11 14 17 19 22 23 25 28 30 32 36 39 LCS_GDT Y 35 Y 35 4 4 19 3 4 4 4 4 5 6 8 11 14 20 21 22 27 30 33 35 38 39 41 LCS_GDT I 36 I 36 3 4 19 3 4 4 7 10 13 14 15 17 19 24 25 27 30 32 34 35 38 39 41 LCS_GDT A 37 A 37 4 5 19 3 4 4 5 7 10 11 13 16 18 21 24 27 30 32 34 35 38 39 41 LCS_GDT Q 38 Q 38 4 5 19 3 4 4 5 8 10 11 15 17 18 21 24 27 30 32 34 35 38 39 41 LCS_GDT N 39 N 39 4 5 19 3 4 4 5 5 5 8 15 17 18 21 24 27 30 32 34 35 38 39 41 LCS_GDT E 40 E 40 4 5 19 3 4 4 5 5 6 6 8 10 15 21 24 26 30 32 34 35 38 39 41 LCS_GDT F 41 F 41 4 5 18 3 4 4 5 5 6 8 10 16 17 19 21 22 26 28 32 35 38 39 41 LCS_GDT S 42 S 42 3 4 14 3 4 4 5 7 10 12 14 16 17 19 21 21 23 24 26 29 31 35 36 LCS_GDT G 43 G 43 4 5 14 3 4 4 5 7 10 12 14 16 17 19 21 22 23 24 26 30 31 33 35 LCS_GDT W 44 W 44 4 5 14 3 4 4 4 5 5 7 8 13 16 18 20 22 23 24 26 30 30 31 35 LCS_GDT E 45 E 45 4 5 14 3 4 4 5 5 6 7 8 10 11 14 16 22 22 24 26 30 30 31 32 LCS_GDT S 46 S 46 4 5 18 3 4 4 5 5 6 7 8 10 11 15 20 22 22 24 26 30 30 31 32 LCS_GDT K 47 K 47 3 5 18 3 3 4 5 5 6 7 8 10 12 14 15 18 22 23 26 30 30 31 32 LCS_GDT L 48 L 48 3 4 18 3 3 3 5 5 6 6 8 10 12 13 15 18 22 23 26 30 30 31 32 LCS_GDT G 49 G 49 4 5 18 3 4 4 5 5 6 8 9 14 16 18 20 22 23 24 26 30 30 31 32 LCS_GDT N 50 N 50 4 5 18 3 4 4 7 11 11 12 13 16 17 19 21 22 23 24 26 30 30 31 32 LCS_GDT G 51 G 51 4 9 18 3 4 4 5 7 10 12 14 15 17 19 21 22 23 24 26 30 30 31 33 LCS_GDT E 52 E 52 8 11 18 4 6 8 9 10 11 12 14 14 16 18 21 22 23 24 26 30 30 31 35 LCS_GDT I 53 I 53 8 11 18 4 6 8 9 10 11 12 14 15 16 19 21 22 23 24 26 30 31 33 35 LCS_GDT T 54 T 54 8 11 18 4 6 8 9 11 11 12 14 16 17 19 21 22 23 24 26 30 31 33 35 LCS_GDT V 55 V 55 8 11 18 4 6 8 9 11 11 12 14 16 17 19 21 22 23 24 26 30 31 33 35 LCS_GDT K 56 K 56 8 11 18 3 6 8 9 11 11 12 14 16 17 19 21 22 23 26 29 34 35 38 41 LCS_GDT E 57 E 57 8 11 18 3 6 8 9 11 11 12 14 16 17 19 21 25 26 28 32 35 38 39 41 LCS_GDT F 58 F 58 8 11 18 3 6 8 9 11 11 12 14 16 17 21 24 26 30 32 34 35 38 39 41 LCS_GDT I 59 I 59 8 11 18 3 6 8 9 11 11 12 14 16 17 21 24 26 30 32 34 35 38 39 41 LCS_GDT E 60 E 60 7 11 18 3 4 7 8 11 11 12 16 17 19 24 25 27 30 32 34 35 38 39 41 LCS_GDT G 61 G 61 5 11 18 3 4 5 8 11 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT L 62 L 62 5 11 18 3 4 5 7 11 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 LCS_GDT G 63 G 63 5 10 18 3 4 6 9 11 11 12 15 16 19 24 25 27 30 32 34 35 38 39 41 LCS_GDT Y 64 Y 64 3 3 18 3 4 4 4 4 8 12 12 16 17 19 23 25 27 29 31 34 37 39 41 LCS_GDT S 65 S 65 3 3 18 3 4 4 7 8 11 12 12 16 17 19 21 21 25 26 26 29 30 33 37 LCS_AVERAGE LCS_A: 17.56 ( 8.19 11.77 32.73 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 7 8 9 11 13 16 16 19 21 24 25 27 30 32 34 35 38 39 41 GDT PERCENT_AT 11.11 11.11 12.70 14.29 17.46 20.63 25.40 25.40 30.16 33.33 38.10 39.68 42.86 47.62 50.79 53.97 55.56 60.32 61.90 65.08 GDT RMS_LOCAL 0.33 0.33 0.99 1.09 1.90 2.13 2.51 2.51 2.92 3.30 3.92 4.05 4.33 4.73 4.99 5.25 5.36 5.92 5.90 6.33 GDT RMS_ALL_AT 20.80 20.80 19.92 20.35 19.37 14.61 16.09 16.09 16.29 16.50 15.32 15.25 15.20 14.87 14.69 14.49 14.56 14.05 14.57 14.00 # Checking swapping # possible swapping detected: F 4 F 4 # possible swapping detected: D 12 D 12 # possible swapping detected: E 29 E 29 # possible swapping detected: D 31 D 31 # possible swapping detected: F 41 F 41 # possible swapping detected: E 45 E 45 # possible swapping detected: E 52 E 52 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 3 V 3 26.398 0 0.581 0.754 28.365 0.000 0.000 LGA F 4 F 4 22.966 0 0.566 1.571 24.849 0.000 0.000 LGA K 5 K 5 20.623 0 0.590 1.265 27.324 0.000 0.000 LGA R 6 R 6 16.380 0 0.611 1.173 20.298 0.000 0.000 LGA V 7 V 7 11.328 0 0.606 0.727 13.161 1.905 1.293 LGA A 8 A 8 10.028 0 0.529 0.480 11.897 0.119 0.095 LGA G 9 G 9 9.333 0 0.080 0.080 9.406 5.714 5.714 LGA I 10 I 10 4.810 0 0.536 0.612 9.033 31.548 23.810 LGA K 11 K 11 2.075 0 0.124 1.011 7.565 59.881 41.058 LGA D 12 D 12 3.247 0 0.536 1.188 8.663 65.119 37.679 LGA K 13 K 13 2.384 0 0.052 0.894 13.042 65.595 34.709 LGA A 14 A 14 4.830 0 0.113 0.121 6.704 37.262 32.476 LGA A 15 A 15 4.637 0 0.118 0.116 6.293 42.143 37.143 LGA I 16 I 16 3.157 0 0.094 0.775 7.270 57.381 40.536 LGA K 17 K 17 3.438 0 0.238 0.732 14.061 59.286 30.423 LGA T 18 T 18 2.757 0 0.131 1.059 6.068 66.905 51.293 LGA L 19 L 19 2.225 0 0.166 0.856 4.631 68.810 58.036 LGA I 20 I 20 1.673 0 0.031 0.187 2.580 72.976 70.952 LGA S 21 S 21 1.717 0 0.065 0.614 1.942 75.000 75.714 LGA A 22 A 22 2.570 0 0.030 0.041 2.982 59.048 58.667 LGA A 23 A 23 2.489 0 0.109 0.112 2.819 62.857 61.714 LGA Y 24 Y 24 1.977 0 0.192 1.056 5.794 65.000 48.333 LGA R 25 R 25 6.033 0 0.139 1.380 8.239 20.357 13.247 LGA Q 26 Q 26 7.729 0 0.023 1.208 9.302 9.762 5.608 LGA I 27 I 27 6.397 0 0.125 0.179 10.412 24.286 14.167 LGA F 28 F 28 3.185 0 0.053 1.335 5.573 53.690 38.745 LGA E 29 E 29 5.135 0 0.018 1.158 13.417 32.619 15.661 LGA R 30 R 30 1.950 0 0.551 1.239 9.166 50.238 33.420 LGA D 31 D 31 8.382 0 0.616 1.288 11.147 6.667 3.393 LGA I 32 I 32 11.003 0 0.600 1.030 14.150 0.119 0.119 LGA A 33 A 33 13.212 0 0.213 0.296 13.212 0.000 0.000 LGA P 34 P 34 15.592 0 0.664 0.901 17.952 0.000 0.000 LGA Y 35 Y 35 13.314 0 0.594 0.806 15.058 0.000 0.000 LGA I 36 I 36 7.467 0 0.563 0.618 9.225 10.476 13.750 LGA A 37 A 37 9.648 0 0.262 0.277 12.232 1.905 1.524 LGA Q 38 Q 38 9.987 0 0.370 0.771 10.659 0.357 0.423 LGA N 39 N 39 9.423 0 0.047 1.114 10.040 0.595 1.310 LGA E 40 E 40 11.516 0 0.570 1.190 12.334 0.000 0.000 LGA F 41 F 41 14.876 0 0.511 0.532 19.556 0.000 0.390 LGA S 42 S 42 20.285 0 0.651 0.679 22.003 0.000 0.000 LGA G 43 G 43 23.703 0 0.629 0.629 25.886 0.000 0.000 LGA W 44 W 44 22.664 0 0.046 1.481 25.581 0.000 0.000 LGA E 45 E 45 27.047 0 0.163 1.173 31.956 0.000 0.000 LGA S 46 S 46 32.961 0 0.654 0.695 34.309 0.000 0.000 LGA K 47 K 47 33.914 0 0.665 1.268 36.542 0.000 0.000 LGA L 48 L 48 34.223 0 0.102 0.275 37.322 0.000 0.000 LGA G 49 G 49 35.071 0 0.457 0.457 37.619 0.000 0.000 LGA N 50 N 50 35.290 0 0.231 0.816 36.931 0.000 0.000 LGA G 51 G 51 33.807 0 0.391 0.391 33.807 0.000 0.000 LGA E 52 E 52 28.588 0 0.640 1.322 32.130 0.000 0.000 LGA I 53 I 53 22.816 0 0.032 1.004 24.812 0.000 0.000 LGA T 54 T 54 21.286 0 0.055 1.088 21.340 0.000 0.000 LGA V 55 V 55 18.958 0 0.103 0.123 23.381 0.000 0.000 LGA K 56 K 56 15.083 0 0.081 1.013 17.117 0.000 0.000 LGA E 57 E 57 12.131 0 0.073 1.420 14.123 0.714 0.317 LGA F 58 F 58 10.257 0 0.046 0.999 12.284 5.000 2.641 LGA I 59 I 59 10.417 0 0.057 0.596 16.493 1.905 0.952 LGA E 60 E 60 7.157 0 0.028 0.954 8.757 22.262 12.169 LGA G 61 G 61 2.457 0 0.077 0.077 3.734 57.738 57.738 LGA L 62 L 62 1.922 0 0.162 0.486 8.198 59.524 40.595 LGA G 63 G 63 6.690 0 0.605 0.605 9.219 14.762 14.762 LGA Y 64 Y 64 8.969 0 0.684 0.856 17.337 2.619 1.111 LGA S 65 S 65 10.378 0 0.202 0.480 13.030 0.357 0.714 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 63 252 252 100.00 498 498 100.00 63 SUMMARY(RMSD_GDC): 12.218 12.194 12.875 20.198 15.594 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 63 63 4.0 16 2.51 26.190 22.943 0.612 LGA_LOCAL RMSD: 2.512 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.091 Number of assigned atoms: 63 Std_ASGN_ATOMS RMSD: 12.218 Standard rmsd on all 63 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.094252 * X + -0.984653 * Y + -0.146886 * Z + 154.545975 Y_new = -0.627894 * X + 0.055702 * Y + -0.776303 * Z + 193.657440 Z_new = 0.772571 * X + 0.165397 * Y + -0.613008 * Z + -47.624424 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.421800 -0.882880 2.878056 [DEG: -81.4631 -50.5853 164.9004 ] ZXZ: -0.187001 2.230658 1.359893 [DEG: -10.7144 127.8073 77.9161 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0553TS020_1-D1 REMARK 2: T0553-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0553TS020_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 63 63 4.0 16 2.51 22.943 12.22 REMARK ---------------------------------------------------------- MOLECULE T0553TS020_1-D1 USER MOD reduce.3.15.091106 removed 260 hydrogens (0 hets) REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFR REMARK TARGET T0553 REMARK MODEL 1 REMARK PARENT N/A ATOM 23 N VAL 3 10.614 -11.464 -30.157 1.00 0.00 N ATOM 24 CA VAL 3 11.121 -10.141 -29.743 1.00 0.00 C ATOM 25 C VAL 3 10.135 -9.373 -28.897 1.00 0.00 C ATOM 26 O VAL 3 10.477 -8.923 -27.786 1.00 0.00 O ATOM 27 CB VAL 3 11.600 -9.336 -30.953 1.00 0.00 C ATOM 28 CG1 VAL 3 11.540 -7.847 -30.688 1.00 0.00 C ATOM 29 CG2 VAL 3 13.037 -9.705 -31.326 1.00 0.00 C ATOM 31 N PHE 4 8.825 -9.559 -29.161 1.00 0.00 N ATOM 32 CA PHE 4 7.777 -9.077 -28.310 1.00 0.00 C ATOM 33 C PHE 4 7.669 -9.756 -26.976 1.00 0.00 C ATOM 34 O PHE 4 7.692 -9.135 -25.888 1.00 0.00 O ATOM 35 CB PHE 4 6.399 -9.043 -29.002 1.00 0.00 C ATOM 36 CG PHE 4 5.265 -9.006 -27.993 1.00 0.00 C ATOM 37 CD1 PHE 4 4.791 -7.808 -27.488 1.00 0.00 C ATOM 38 CD2 PHE 4 4.621 -10.191 -27.635 1.00 0.00 C ATOM 39 CE1 PHE 4 3.858 -7.816 -26.442 1.00 0.00 C ATOM 40 CE2 PHE 4 3.667 -10.190 -26.609 1.00 0.00 C ATOM 41 CZ PHE 4 3.116 -8.977 -26.194 1.00 0.00 C ATOM 43 N LYS 5 7.943 -11.080 -27.007 1.00 0.00 N ATOM 44 CA LYS 5 7.952 -11.885 -25.767 1.00 0.00 C ATOM 45 C LYS 5 9.173 -11.576 -24.912 1.00 0.00 C ATOM 46 O LYS 5 9.058 -11.402 -23.695 1.00 0.00 O ATOM 47 CB LYS 5 7.904 -13.376 -26.131 1.00 0.00 C ATOM 48 CG LYS 5 6.624 -13.758 -26.871 1.00 0.00 C ATOM 49 CD LYS 5 6.422 -15.263 -26.843 1.00 0.00 C ATOM 50 CE LYS 5 5.086 -15.715 -27.414 1.00 0.00 C ATOM 51 NZ LYS 5 4.589 -17.009 -26.858 1.00 0.00 N ATOM 56 N ARG 6 10.364 -11.539 -25.536 1.00 0.00 N ATOM 57 CA ARG 6 11.590 -11.244 -24.777 1.00 0.00 C ATOM 58 C ARG 6 11.465 -9.903 -24.092 1.00 0.00 C ATOM 59 O ARG 6 11.913 -9.763 -22.943 1.00 0.00 O ATOM 60 CB ARG 6 12.817 -11.317 -25.696 1.00 0.00 C ATOM 61 CG ARG 6 13.489 -12.671 -25.794 1.00 0.00 C ATOM 62 CD ARG 6 14.740 -12.676 -26.656 1.00 0.00 C ATOM 63 NE ARG 6 14.369 -12.944 -28.055 1.00 0.00 N ATOM 64 CZ ARG 6 15.182 -12.804 -29.100 1.00 0.00 C ATOM 65 NH1 ARG 6 14.880 -13.336 -30.283 1.00 0.00 N ATOM 66 NH2 ARG 6 16.394 -12.289 -28.905 1.00 0.00 N ATOM 73 N VAL 7 10.978 -8.873 -24.819 1.00 0.00 N ATOM 74 CA VAL 7 10.792 -7.596 -24.173 1.00 0.00 C ATOM 75 C VAL 7 9.781 -7.647 -23.060 1.00 0.00 C ATOM 76 O VAL 7 10.075 -7.181 -21.936 1.00 0.00 O ATOM 77 CB VAL 7 10.467 -6.476 -25.185 1.00 0.00 C ATOM 78 CG1 VAL 7 9.811 -5.257 -24.607 1.00 0.00 C ATOM 79 CG2 VAL 7 11.703 -6.119 -25.985 1.00 0.00 C ATOM 81 N ALA 8 8.783 -8.547 -23.137 1.00 0.00 N ATOM 82 CA ALA 8 7.961 -8.743 -21.929 1.00 0.00 C ATOM 83 C ALA 8 8.691 -9.458 -20.833 1.00 0.00 C ATOM 84 O ALA 8 8.418 -9.249 -19.651 1.00 0.00 O ATOM 85 CB ALA 8 6.663 -9.486 -22.321 1.00 0.00 C ATOM 87 N GLY 9 9.691 -10.301 -21.178 1.00 0.00 N ATOM 88 CA GLY 9 10.400 -10.985 -20.079 1.00 0.00 C ATOM 89 C GLY 9 11.506 -10.143 -19.505 1.00 0.00 C ATOM 90 O GLY 9 11.786 -10.268 -18.295 1.00 0.00 O ATOM 92 N ILE 10 11.934 -9.099 -20.220 1.00 0.00 N ATOM 93 CA ILE 10 12.706 -8.007 -19.586 1.00 0.00 C ATOM 94 C ILE 10 11.805 -7.345 -18.529 1.00 0.00 C ATOM 95 O ILE 10 12.058 -7.297 -17.343 1.00 0.00 O ATOM 96 CB ILE 10 13.177 -7.007 -20.637 1.00 0.00 C ATOM 97 CG1 ILE 10 14.357 -7.437 -21.488 1.00 0.00 C ATOM 98 CG2 ILE 10 13.340 -5.594 -20.051 1.00 0.00 C ATOM 99 CD1 ILE 10 14.359 -6.708 -22.816 1.00 0.00 C ATOM 101 N LYS 11 10.624 -6.923 -19.003 1.00 0.00 N ATOM 102 CA LYS 11 9.717 -6.104 -18.203 1.00 0.00 C ATOM 103 C LYS 11 9.202 -6.887 -16.969 1.00 0.00 C ATOM 104 O LYS 11 8.809 -6.273 -15.995 1.00 0.00 O ATOM 105 CB LYS 11 8.496 -5.667 -19.037 1.00 0.00 C ATOM 106 CG LYS 11 8.852 -4.533 -19.987 1.00 0.00 C ATOM 107 CD LYS 11 7.706 -4.200 -20.946 1.00 0.00 C ATOM 108 CE LYS 11 8.051 -2.958 -21.754 1.00 0.00 C ATOM 109 NZ LYS 11 6.823 -2.251 -22.160 1.00 0.00 N ATOM 114 N ASP 12 9.040 -8.203 -17.159 1.00 0.00 N ATOM 115 CA ASP 12 8.657 -9.048 -16.051 1.00 0.00 C ATOM 116 C ASP 12 9.775 -9.213 -15.018 1.00 0.00 C ATOM 117 O ASP 12 9.642 -8.624 -13.925 1.00 0.00 O ATOM 118 CB ASP 12 8.219 -10.434 -16.526 1.00 0.00 C ATOM 119 CG ASP 12 6.755 -10.538 -16.930 1.00 0.00 C ATOM 120 OD1 ASP 12 5.985 -9.590 -16.654 1.00 0.00 O ATOM 121 OD2 ASP 12 6.491 -11.424 -17.782 1.00 0.00 O ATOM 123 N LYS 13 10.983 -9.578 -15.480 1.00 0.00 N ATOM 124 CA LYS 13 12.143 -9.534 -14.620 1.00 0.00 C ATOM 125 C LYS 13 12.331 -8.250 -13.878 1.00 0.00 C ATOM 126 O LYS 13 12.837 -8.261 -12.746 1.00 0.00 O ATOM 127 CB LYS 13 13.389 -9.978 -15.388 1.00 0.00 C ATOM 128 CG LYS 13 14.714 -9.627 -14.757 1.00 0.00 C ATOM 129 CD LYS 13 15.904 -10.372 -15.315 1.00 0.00 C ATOM 130 CE LYS 13 17.186 -10.122 -14.520 1.00 0.00 C ATOM 131 NZ LYS 13 18.278 -11.084 -14.830 1.00 0.00 N ATOM 136 N ALA 14 12.065 -7.106 -14.486 1.00 0.00 N ATOM 137 CA ALA 14 12.251 -5.824 -13.840 1.00 0.00 C ATOM 138 C ALA 14 11.180 -5.474 -12.833 1.00 0.00 C ATOM 139 O ALA 14 11.357 -4.773 -11.822 1.00 0.00 O ATOM 140 CB ALA 14 12.496 -4.717 -14.860 1.00 0.00 C ATOM 142 N ALA 15 9.953 -5.870 -13.141 1.00 0.00 N ATOM 143 CA ALA 15 8.863 -5.834 -12.149 1.00 0.00 C ATOM 144 C ALA 15 9.148 -6.641 -10.920 1.00 0.00 C ATOM 145 O ALA 15 9.166 -6.048 -9.824 1.00 0.00 O ATOM 146 CB ALA 15 7.539 -6.256 -12.822 1.00 0.00 C ATOM 148 N ILE 16 9.614 -7.895 -11.072 1.00 0.00 N ATOM 149 CA ILE 16 9.906 -8.707 -9.889 1.00 0.00 C ATOM 150 C ILE 16 11.091 -8.136 -9.149 1.00 0.00 C ATOM 151 O ILE 16 11.182 -8.198 -7.919 1.00 0.00 O ATOM 152 CB ILE 16 10.160 -10.165 -10.299 1.00 0.00 C ATOM 153 CG1 ILE 16 9.014 -10.755 -11.067 1.00 0.00 C ATOM 154 CG2 ILE 16 10.537 -11.013 -9.086 1.00 0.00 C ATOM 155 CD1 ILE 16 9.391 -11.931 -11.959 1.00 0.00 C ATOM 157 N LYS 17 12.030 -7.574 -9.920 1.00 0.00 N ATOM 158 CA LYS 17 13.240 -7.020 -9.321 1.00 0.00 C ATOM 159 C LYS 17 12.851 -5.820 -8.417 1.00 0.00 C ATOM 160 O LYS 17 12.871 -5.909 -7.212 1.00 0.00 O ATOM 161 CB LYS 17 14.193 -6.524 -10.403 1.00 0.00 C ATOM 162 CG LYS 17 15.292 -5.615 -9.849 1.00 0.00 C ATOM 163 CD LYS 17 16.126 -5.081 -11.010 1.00 0.00 C ATOM 164 CE LYS 17 17.230 -4.121 -10.552 1.00 0.00 C ATOM 165 NZ LYS 17 18.106 -3.714 -11.674 1.00 0.00 N ATOM 170 N THR 18 12.188 -4.853 -9.037 1.00 0.00 N ATOM 171 CA THR 18 12.102 -3.533 -8.417 1.00 0.00 C ATOM 172 C THR 18 10.816 -3.429 -7.612 1.00 0.00 C ATOM 173 O THR 18 10.848 -3.260 -6.371 1.00 0.00 O ATOM 174 CB THR 18 12.204 -2.404 -9.431 1.00 0.00 C ATOM 175 OG1 THR 18 11.070 -2.405 -10.275 1.00 0.00 O ATOM 176 CG2 THR 18 13.446 -2.450 -10.307 1.00 0.00 C ATOM 179 N LEU 19 9.665 -3.484 -8.275 1.00 0.00 N ATOM 180 CA LEU 19 8.403 -3.330 -7.504 1.00 0.00 C ATOM 181 C LEU 19 8.220 -4.451 -6.503 1.00 0.00 C ATOM 182 O LEU 19 8.343 -4.208 -5.302 1.00 0.00 O ATOM 183 CB LEU 19 7.246 -3.335 -8.527 1.00 0.00 C ATOM 184 CG LEU 19 5.963 -2.775 -7.912 1.00 0.00 C ATOM 185 CD1 LEU 19 6.142 -1.341 -7.409 1.00 0.00 C ATOM 186 CD2 LEU 19 4.910 -2.611 -8.990 1.00 0.00 C ATOM 188 N ILE 20 8.269 -5.710 -6.975 1.00 0.00 N ATOM 189 CA ILE 20 7.850 -6.825 -6.135 1.00 0.00 C ATOM 190 C ILE 20 8.839 -7.072 -5.035 1.00 0.00 C ATOM 191 O ILE 20 8.419 -7.354 -3.898 1.00 0.00 O ATOM 192 CB ILE 20 7.735 -8.089 -7.001 1.00 0.00 C ATOM 193 CG1 ILE 20 6.513 -8.168 -7.889 1.00 0.00 C ATOM 194 CG2 ILE 20 7.920 -9.366 -6.191 1.00 0.00 C ATOM 195 CD1 ILE 20 6.440 -9.474 -8.685 1.00 0.00 C ATOM 197 N SER 21 10.153 -6.960 -5.305 1.00 0.00 N ATOM 198 CA SER 21 11.127 -7.226 -4.260 1.00 0.00 C ATOM 199 C SER 21 11.554 -5.899 -3.631 1.00 0.00 C ATOM 200 O SER 21 11.612 -5.852 -2.414 1.00 0.00 O ATOM 201 CB SER 21 12.312 -8.003 -4.829 1.00 0.00 C ATOM 202 OG SER 21 13.155 -8.547 -3.824 1.00 0.00 O ATOM 205 N ALA 22 12.239 -5.052 -4.435 1.00 0.00 N ATOM 206 CA ALA 22 12.973 -3.936 -3.844 1.00 0.00 C ATOM 207 C ALA 22 12.054 -3.074 -3.013 1.00 0.00 C ATOM 208 O ALA 22 12.430 -2.553 -1.948 1.00 0.00 O ATOM 209 CB ALA 22 13.633 -3.087 -4.928 1.00 0.00 C ATOM 211 N ALA 23 10.957 -2.628 -3.636 1.00 0.00 N ATOM 212 CA ALA 23 10.031 -1.722 -2.977 1.00 0.00 C ATOM 213 C ALA 23 9.125 -2.474 -2.002 1.00 0.00 C ATOM 214 O ALA 23 8.974 -2.049 -0.833 1.00 0.00 O ATOM 215 CB ALA 23 9.212 -0.962 -4.013 1.00 0.00 C ATOM 217 N TYR 24 8.546 -3.594 -2.409 1.00 0.00 N ATOM 218 CA TYR 24 7.369 -4.113 -1.716 1.00 0.00 C ATOM 219 C TYR 24 7.771 -5.090 -0.627 1.00 0.00 C ATOM 220 O TYR 24 7.904 -4.671 0.520 1.00 0.00 O ATOM 221 CB TYR 24 6.413 -4.760 -2.736 1.00 0.00 C ATOM 222 CG TYR 24 5.057 -5.144 -2.175 1.00 0.00 C ATOM 223 CD1 TYR 24 4.185 -4.155 -1.708 1.00 0.00 C ATOM 224 CD2 TYR 24 4.672 -6.471 -2.037 1.00 0.00 C ATOM 225 CE1 TYR 24 2.931 -4.505 -1.195 1.00 0.00 C ATOM 226 CE2 TYR 24 3.420 -6.824 -1.508 1.00 0.00 C ATOM 227 CZ TYR 24 2.555 -5.829 -1.062 1.00 0.00 C ATOM 228 OH TYR 24 1.286 -6.166 -0.687 1.00 0.00 O ATOM 231 N ARG 25 8.382 -6.207 -1.070 1.00 0.00 N ATOM 232 CA ARG 25 8.811 -7.189 -0.072 1.00 0.00 C ATOM 233 C ARG 25 9.750 -6.565 0.937 1.00 0.00 C ATOM 234 O ARG 25 9.715 -6.833 2.151 1.00 0.00 O ATOM 235 CB ARG 25 9.497 -8.353 -0.770 1.00 0.00 C ATOM 236 CG ARG 25 10.285 -9.235 0.159 1.00 0.00 C ATOM 237 CD ARG 25 11.054 -10.293 -0.586 1.00 0.00 C ATOM 238 NE ARG 25 12.236 -9.722 -1.248 1.00 0.00 N ATOM 239 CZ ARG 25 13.418 -9.597 -0.643 1.00 0.00 C ATOM 240 NH1 ARG 25 13.592 -9.965 0.624 1.00 0.00 N ATOM 241 NH2 ARG 25 14.448 -9.053 -1.296 1.00 0.00 N ATOM 248 N GLN 26 10.779 -5.846 0.430 1.00 0.00 N ATOM 249 CA GLN 26 11.859 -5.398 1.255 1.00 0.00 C ATOM 250 C GLN 26 11.511 -4.298 2.215 1.00 0.00 C ATOM 251 O GLN 26 11.789 -4.422 3.418 1.00 0.00 O ATOM 252 CB GLN 26 13.127 -5.090 0.455 1.00 0.00 C ATOM 253 CG GLN 26 14.180 -4.275 1.142 1.00 0.00 C ATOM 254 CD GLN 26 15.320 -3.884 0.222 1.00 0.00 C ATOM 255 OE1 GLN 26 16.439 -4.420 0.292 1.00 0.00 O ATOM 256 NE2 GLN 26 14.988 -3.226 -0.891 1.00 0.00 N ATOM 260 N ILE 27 11.124 -3.122 1.707 1.00 0.00 N ATOM 261 CA ILE 27 10.773 -2.020 2.568 1.00 0.00 C ATOM 262 C ILE 27 9.313 -1.991 3.001 1.00 0.00 C ATOM 263 O ILE 27 9.047 -1.771 4.160 1.00 0.00 O ATOM 264 CB ILE 27 11.217 -0.665 2.016 1.00 0.00 C ATOM 265 CG1 ILE 27 12.693 -0.576 1.693 1.00 0.00 C ATOM 266 CG2 ILE 27 10.695 0.529 2.822 1.00 0.00 C ATOM 267 CD1 ILE 27 12.960 0.521 0.675 1.00 0.00 C ATOM 269 N PHE 28 8.408 -1.853 2.020 1.00 0.00 N ATOM 270 CA PHE 28 7.040 -1.410 2.310 1.00 0.00 C ATOM 271 C PHE 28 6.318 -2.478 3.155 1.00 0.00 C ATOM 272 O PHE 28 5.372 -2.219 3.860 1.00 0.00 O ATOM 273 CB PHE 28 6.282 -1.253 0.978 1.00 0.00 C ATOM 274 CG PHE 28 4.794 -0.992 1.121 1.00 0.00 C ATOM 275 CD1 PHE 28 4.297 0.299 1.057 1.00 0.00 C ATOM 276 CD2 PHE 28 3.911 -2.060 1.317 1.00 0.00 C ATOM 277 CE1 PHE 28 2.941 0.550 1.299 1.00 0.00 C ATOM 278 CE2 PHE 28 2.555 -1.804 1.525 1.00 0.00 C ATOM 279 CZ PHE 28 2.040 -0.513 1.397 1.00 0.00 C ATOM 281 N GLU 29 6.695 -3.754 2.895 1.00 0.00 N ATOM 282 CA GLU 29 6.084 -4.830 3.688 1.00 0.00 C ATOM 283 C GLU 29 6.618 -4.724 5.144 1.00 0.00 C ATOM 284 O GLU 29 5.844 -4.796 6.122 1.00 0.00 O ATOM 285 CB GLU 29 6.471 -6.221 3.139 1.00 0.00 C ATOM 286 CG GLU 29 5.645 -7.333 3.738 1.00 0.00 C ATOM 287 CD GLU 29 6.274 -8.712 3.701 1.00 0.00 C ATOM 288 OE1 GLU 29 7.504 -8.878 3.703 1.00 0.00 O ATOM 289 OE2 GLU 29 5.458 -9.680 3.614 1.00 0.00 O ATOM 291 N ARG 30 7.929 -4.684 5.301 1.00 0.00 N ATOM 292 CA ARG 30 8.486 -4.472 6.655 1.00 0.00 C ATOM 293 C ARG 30 7.769 -3.361 7.384 1.00 0.00 C ATOM 294 O ARG 30 7.276 -3.603 8.487 1.00 0.00 O ATOM 295 CB ARG 30 9.990 -4.186 6.604 1.00 0.00 C ATOM 296 CG ARG 30 10.613 -4.014 7.970 1.00 0.00 C ATOM 297 CD ARG 30 11.904 -3.196 7.980 1.00 0.00 C ATOM 298 NE ARG 30 11.692 -1.798 7.578 1.00 0.00 N ATOM 299 CZ ARG 30 12.669 -0.888 7.514 1.00 0.00 C ATOM 300 NH1 ARG 30 12.391 0.384 7.233 1.00 0.00 N ATOM 301 NH2 ARG 30 13.937 -1.246 7.705 1.00 0.00 N ATOM 308 N ASP 31 7.590 -2.215 6.738 1.00 0.00 N ATOM 309 CA ASP 31 7.093 -1.024 7.446 1.00 0.00 C ATOM 310 C ASP 31 5.592 -1.175 7.721 1.00 0.00 C ATOM 311 O ASP 31 5.112 -0.664 8.705 1.00 0.00 O ATOM 312 CB ASP 31 7.296 0.224 6.570 1.00 0.00 C ATOM 313 CG ASP 31 8.737 0.695 6.459 1.00 0.00 C ATOM 314 OD1 ASP 31 9.636 0.099 7.088 1.00 0.00 O ATOM 315 OD2 ASP 31 8.965 1.811 5.921 1.00 0.00 O ATOM 317 N ILE 32 4.867 -1.763 6.786 1.00 0.00 N ATOM 318 CA ILE 32 3.425 -1.567 6.742 1.00 0.00 C ATOM 319 C ILE 32 2.604 -2.773 7.077 1.00 0.00 C ATOM 320 O ILE 32 1.698 -2.677 7.934 1.00 0.00 O ATOM 321 CB ILE 32 3.033 -0.978 5.396 1.00 0.00 C ATOM 322 CG1 ILE 32 3.464 0.451 5.136 1.00 0.00 C ATOM 323 CG2 ILE 32 1.553 -1.209 5.077 1.00 0.00 C ATOM 324 CD1 ILE 32 2.891 1.407 6.159 1.00 0.00 C ATOM 326 N ALA 33 3.084 -3.983 6.717 1.00 0.00 N ATOM 327 CA ALA 33 2.153 -5.126 6.730 1.00 0.00 C ATOM 328 C ALA 33 2.665 -6.219 7.687 1.00 0.00 C ATOM 329 O ALA 33 3.702 -6.041 8.346 1.00 0.00 O ATOM 330 CB ALA 33 1.946 -5.670 5.324 1.00 0.00 C ATOM 332 N PRO 34 1.700 -7.017 8.187 1.00 0.00 N ATOM 333 CA PRO 34 2.011 -7.916 9.320 1.00 0.00 C ATOM 334 C PRO 34 3.014 -8.968 8.835 1.00 0.00 C ATOM 335 O PRO 34 3.089 -9.319 7.658 1.00 0.00 O ATOM 336 CB PRO 34 0.657 -8.532 9.626 1.00 0.00 C ATOM 337 CG PRO 34 -0.019 -8.892 8.344 1.00 0.00 C ATOM 338 CD PRO 34 0.216 -7.693 7.471 1.00 0.00 C ATOM 339 N TYR 35 3.917 -9.289 9.780 1.00 0.00 N ATOM 340 CA TYR 35 5.043 -10.178 9.448 1.00 0.00 C ATOM 341 C TYR 35 4.481 -11.551 9.111 1.00 0.00 C ATOM 342 O TYR 35 4.124 -12.346 9.995 1.00 0.00 O ATOM 343 CB TYR 35 5.934 -10.309 10.701 1.00 0.00 C ATOM 344 CG TYR 35 6.368 -8.985 11.252 1.00 0.00 C ATOM 345 CD1 TYR 35 5.967 -8.595 12.535 1.00 0.00 C ATOM 346 CD2 TYR 35 7.131 -8.088 10.513 1.00 0.00 C ATOM 347 CE1 TYR 35 6.274 -7.356 13.065 1.00 0.00 C ATOM 348 CE2 TYR 35 7.508 -6.847 11.077 1.00 0.00 C ATOM 349 CZ TYR 35 7.044 -6.479 12.320 1.00 0.00 C ATOM 350 OH TYR 35 7.366 -5.234 12.833 1.00 0.00 O ATOM 353 N ILE 36 4.245 -11.781 7.810 1.00 0.00 N ATOM 354 CA ILE 36 3.604 -12.988 7.363 1.00 0.00 C ATOM 355 C ILE 36 4.537 -14.138 7.049 1.00 0.00 C ATOM 356 O ILE 36 5.490 -14.074 6.256 1.00 0.00 O ATOM 357 CB ILE 36 2.573 -12.751 6.241 1.00 0.00 C ATOM 358 CG1 ILE 36 1.626 -11.634 6.593 1.00 0.00 C ATOM 359 CG2 ILE 36 3.261 -12.489 4.906 1.00 0.00 C ATOM 360 CD1 ILE 36 1.048 -10.968 5.351 1.00 0.00 C ATOM 362 N ALA 37 4.370 -15.238 7.810 1.00 0.00 N ATOM 363 CA ALA 37 5.130 -16.450 7.461 1.00 0.00 C ATOM 364 C ALA 37 4.567 -17.072 6.166 1.00 0.00 C ATOM 365 O ALA 37 5.090 -16.846 5.059 1.00 0.00 O ATOM 366 CB ALA 37 4.985 -17.480 8.598 1.00 0.00 C ATOM 368 N GLN 38 3.593 -17.932 6.338 1.00 0.00 N ATOM 369 CA GLN 38 3.085 -18.767 5.248 1.00 0.00 C ATOM 370 C GLN 38 1.632 -19.070 5.450 1.00 0.00 C ATOM 371 O GLN 38 0.800 -18.334 4.895 1.00 0.00 O ATOM 372 CB GLN 38 3.890 -20.052 5.106 1.00 0.00 C ATOM 373 CG GLN 38 3.680 -20.821 3.803 1.00 0.00 C ATOM 374 CD GLN 38 4.631 -22.022 3.706 1.00 0.00 C ATOM 375 OE1 GLN 38 4.283 -23.111 4.161 1.00 0.00 O ATOM 376 NE2 GLN 38 5.913 -21.707 3.537 1.00 0.00 N ATOM 380 N ASN 39 1.290 -19.783 6.531 1.00 0.00 N ATOM 381 CA ASN 39 -0.058 -19.718 7.116 1.00 0.00 C ATOM 382 C ASN 39 -0.154 -18.683 8.247 1.00 0.00 C ATOM 383 O ASN 39 -1.302 -18.231 8.458 1.00 0.00 O ATOM 384 CB ASN 39 -0.500 -21.093 7.610 1.00 0.00 C ATOM 385 CG ASN 39 -0.272 -22.252 6.668 1.00 0.00 C ATOM 386 OD1 ASN 39 0.485 -23.195 6.976 1.00 0.00 O ATOM 387 ND2 ASN 39 -0.517 -22.021 5.372 1.00 0.00 N ATOM 391 N GLU 40 0.911 -18.350 8.914 1.00 0.00 N ATOM 392 CA GLU 40 0.768 -17.613 10.195 1.00 0.00 C ATOM 393 C GLU 40 1.007 -16.098 9.974 1.00 0.00 C ATOM 394 O GLU 40 2.039 -15.667 9.465 1.00 0.00 O ATOM 395 CB GLU 40 1.772 -18.130 11.229 1.00 0.00 C ATOM 396 CG GLU 40 1.950 -19.621 11.235 1.00 0.00 C ATOM 397 CD GLU 40 3.295 -20.031 11.802 1.00 0.00 C ATOM 398 OE1 GLU 40 4.069 -19.224 12.332 1.00 0.00 O ATOM 399 OE2 GLU 40 3.582 -21.253 11.706 1.00 0.00 O ATOM 401 N PHE 41 0.119 -15.320 10.621 1.00 0.00 N ATOM 402 CA PHE 41 0.364 -13.878 10.625 1.00 0.00 C ATOM 403 C PHE 41 0.882 -13.421 11.953 1.00 0.00 C ATOM 404 O PHE 41 0.223 -13.579 12.983 1.00 0.00 O ATOM 405 CB PHE 41 -0.863 -13.089 10.195 1.00 0.00 C ATOM 406 CG PHE 41 -1.241 -13.190 8.719 1.00 0.00 C ATOM 407 CD1 PHE 41 -1.643 -14.411 8.204 1.00 0.00 C ATOM 408 CD2 PHE 41 -1.544 -12.024 8.009 1.00 0.00 C ATOM 409 CE1 PHE 41 -2.133 -14.509 6.900 1.00 0.00 C ATOM 410 CE2 PHE 41 -2.020 -12.133 6.701 1.00 0.00 C ATOM 411 CZ PHE 41 -2.218 -13.381 6.101 1.00 0.00 C ATOM 413 N SER 42 2.028 -12.723 11.983 1.00 0.00 N ATOM 414 CA SER 42 2.578 -12.218 13.257 1.00 0.00 C ATOM 415 C SER 42 2.351 -10.679 13.326 1.00 0.00 C ATOM 416 O SER 42 2.569 -9.975 12.367 1.00 0.00 O ATOM 417 CB SER 42 4.101 -12.434 13.292 1.00 0.00 C ATOM 418 OG SER 42 4.438 -13.692 12.743 1.00 0.00 O ATOM 421 N GLY 43 1.605 -10.313 14.379 1.00 0.00 N ATOM 422 CA GLY 43 1.156 -8.963 14.547 1.00 0.00 C ATOM 423 C GLY 43 2.287 -7.915 14.450 1.00 0.00 C ATOM 424 O GLY 43 3.283 -8.046 15.139 1.00 0.00 O ATOM 426 N TRP 44 1.892 -6.748 13.916 1.00 0.00 N ATOM 427 CA TRP 44 2.868 -5.692 13.726 1.00 0.00 C ATOM 428 C TRP 44 3.191 -4.894 14.970 1.00 0.00 C ATOM 429 O TRP 44 4.349 -4.516 15.177 1.00 0.00 O ATOM 430 CB TRP 44 2.542 -4.791 12.531 1.00 0.00 C ATOM 431 CG TRP 44 3.712 -3.938 12.080 1.00 0.00 C ATOM 432 CD1 TRP 44 4.654 -4.352 11.148 1.00 0.00 C ATOM 433 NE1 TRP 44 5.480 -3.254 10.857 1.00 0.00 N ATOM 434 CE2 TRP 44 5.269 -2.308 11.828 1.00 0.00 C ATOM 435 CE3 TRP 44 3.486 -1.681 13.342 1.00 0.00 C ATOM 436 CD2 TRP 44 4.076 -2.653 12.515 1.00 0.00 C ATOM 437 CZ2 TRP 44 5.913 -1.089 12.028 1.00 0.00 C ATOM 438 CZ3 TRP 44 4.073 -0.439 13.451 1.00 0.00 C ATOM 439 CH2 TRP 44 5.355 -0.188 12.905 1.00 0.00 C ATOM 442 N GLU 45 2.182 -4.322 15.629 1.00 0.00 N ATOM 443 CA GLU 45 2.414 -3.444 16.740 1.00 0.00 C ATOM 444 C GLU 45 2.390 -4.170 18.061 1.00 0.00 C ATOM 445 O GLU 45 3.419 -4.334 18.738 1.00 0.00 O ATOM 446 CB GLU 45 1.377 -2.303 16.775 1.00 0.00 C ATOM 447 CG GLU 45 1.443 -1.466 18.033 1.00 0.00 C ATOM 448 CD GLU 45 0.843 -0.071 17.858 1.00 0.00 C ATOM 449 OE1 GLU 45 1.356 0.743 17.062 1.00 0.00 O ATOM 450 OE2 GLU 45 -0.150 0.211 18.571 1.00 0.00 O ATOM 452 N SER 46 1.281 -4.888 18.318 1.00 0.00 N ATOM 453 CA SER 46 1.169 -5.627 19.586 1.00 0.00 C ATOM 454 C SER 46 0.770 -7.085 19.250 1.00 0.00 C ATOM 455 O SER 46 -0.084 -7.239 18.404 1.00 0.00 O ATOM 456 CB SER 46 0.052 -4.988 20.419 1.00 0.00 C ATOM 457 OG SER 46 -1.199 -5.514 20.010 1.00 0.00 O ATOM 460 N LYS 47 1.009 -7.973 20.228 1.00 0.00 N ATOM 461 CA LYS 47 0.232 -9.207 20.333 1.00 0.00 C ATOM 462 C LYS 47 -1.196 -8.881 20.802 1.00 0.00 C ATOM 463 O LYS 47 -1.313 -7.934 21.616 1.00 0.00 O ATOM 464 CB LYS 47 0.930 -10.178 21.277 1.00 0.00 C ATOM 465 CG LYS 47 0.233 -11.514 21.438 1.00 0.00 C ATOM 466 CD LYS 47 1.001 -12.484 22.328 1.00 0.00 C ATOM 467 CE LYS 47 0.120 -13.612 22.813 1.00 0.00 C ATOM 468 NZ LYS 47 0.724 -14.410 23.932 1.00 0.00 N ATOM 473 N LEU 48 -2.188 -9.415 20.140 1.00 0.00 N ATOM 474 CA LEU 48 -3.579 -9.047 20.507 1.00 0.00 C ATOM 475 C LEU 48 -4.499 -10.210 20.072 1.00 0.00 C ATOM 476 O LEU 48 -5.175 -10.858 20.890 1.00 0.00 O ATOM 477 CB LEU 48 -4.027 -7.775 19.795 1.00 0.00 C ATOM 478 CG LEU 48 -5.503 -7.482 19.840 1.00 0.00 C ATOM 479 CD1 LEU 48 -6.057 -7.577 21.247 1.00 0.00 C ATOM 480 CD2 LEU 48 -5.805 -6.048 19.451 1.00 0.00 C ATOM 482 N GLY 49 -4.605 -10.382 18.777 1.00 0.00 N ATOM 483 CA GLY 49 -5.267 -11.599 18.266 1.00 0.00 C ATOM 484 C GLY 49 -6.467 -11.214 17.386 1.00 0.00 C ATOM 485 O GLY 49 -7.609 -11.596 17.665 1.00 0.00 O ATOM 487 N ASN 50 -6.219 -10.262 16.465 1.00 0.00 N ATOM 488 CA ASN 50 -7.344 -9.650 15.736 1.00 0.00 C ATOM 489 C ASN 50 -8.216 -10.706 15.049 1.00 0.00 C ATOM 490 O ASN 50 -9.382 -10.853 15.410 1.00 0.00 O ATOM 491 CB ASN 50 -6.828 -8.628 14.698 1.00 0.00 C ATOM 492 CG ASN 50 -6.876 -7.208 15.182 1.00 0.00 C ATOM 493 OD1 ASN 50 -7.885 -6.505 14.952 1.00 0.00 O ATOM 494 ND2 ASN 50 -5.859 -6.781 15.922 1.00 0.00 N ATOM 498 N GLY 51 -7.547 -11.656 14.345 1.00 0.00 N ATOM 499 CA GLY 51 -8.207 -12.917 13.993 1.00 0.00 C ATOM 500 C GLY 51 -8.143 -13.164 12.493 1.00 0.00 C ATOM 501 O GLY 51 -7.613 -14.188 12.010 1.00 0.00 O ATOM 503 N GLU 52 -8.918 -12.386 11.714 1.00 0.00 N ATOM 504 CA GLU 52 -9.218 -12.786 10.336 1.00 0.00 C ATOM 505 C GLU 52 -8.801 -11.749 9.320 1.00 0.00 C ATOM 506 O GLU 52 -8.369 -10.648 9.688 1.00 0.00 O ATOM 507 CB GLU 52 -10.703 -13.100 10.179 1.00 0.00 C ATOM 508 CG GLU 52 -11.286 -14.009 11.246 1.00 0.00 C ATOM 509 CD GLU 52 -12.793 -14.105 11.105 1.00 0.00 C ATOM 510 OE1 GLU 52 -13.440 -13.115 10.695 1.00 0.00 O ATOM 511 OE2 GLU 52 -13.256 -15.272 10.928 1.00 0.00 O ATOM 513 N ILE 53 -8.692 -12.199 8.070 1.00 0.00 N ATOM 514 CA ILE 53 -7.977 -11.400 7.044 1.00 0.00 C ATOM 515 C ILE 53 -8.929 -11.022 5.903 1.00 0.00 C ATOM 516 O ILE 53 -10.017 -11.615 5.714 1.00 0.00 O ATOM 517 CB ILE 53 -6.878 -12.301 6.450 1.00 0.00 C ATOM 518 CG1 ILE 53 -6.055 -12.991 7.516 1.00 0.00 C ATOM 519 CG2 ILE 53 -5.998 -11.544 5.468 1.00 0.00 C ATOM 520 CD1 ILE 53 -5.474 -14.300 7.024 1.00 0.00 C ATOM 522 N THR 54 -8.640 -9.897 5.224 1.00 0.00 N ATOM 523 CA THR 54 -9.536 -9.386 4.203 1.00 0.00 C ATOM 524 C THR 54 -8.929 -9.529 2.797 1.00 0.00 C ATOM 525 O THR 54 -7.680 -9.648 2.714 1.00 0.00 O ATOM 526 CB THR 54 -9.899 -7.920 4.479 1.00 0.00 C ATOM 527 OG1 THR 54 -10.321 -7.730 5.829 1.00 0.00 O ATOM 528 CG2 THR 54 -10.912 -7.376 3.490 1.00 0.00 C ATOM 531 N VAL 55 -9.768 -10.139 1.942 1.00 0.00 N ATOM 532 CA VAL 55 -9.251 -10.617 0.638 1.00 0.00 C ATOM 533 C VAL 55 -9.085 -9.488 -0.332 1.00 0.00 C ATOM 534 O VAL 55 -7.954 -9.250 -0.821 1.00 0.00 O ATOM 535 CB VAL 55 -10.211 -11.695 0.127 1.00 0.00 C ATOM 536 CG1 VAL 55 -9.772 -12.277 -1.196 1.00 0.00 C ATOM 537 CG2 VAL 55 -10.384 -12.807 1.166 1.00 0.00 C ATOM 539 N LYS 56 -9.968 -8.487 -0.222 1.00 0.00 N ATOM 540 CA LYS 56 -9.770 -7.204 -0.940 1.00 0.00 C ATOM 541 C LYS 56 -8.637 -6.401 -0.308 1.00 0.00 C ATOM 542 O LYS 56 -7.918 -5.699 -1.027 1.00 0.00 O ATOM 543 CB LYS 56 -11.044 -6.372 -0.979 1.00 0.00 C ATOM 544 CG LYS 56 -11.142 -5.341 -2.095 1.00 0.00 C ATOM 545 CD LYS 56 -11.200 -5.955 -3.489 1.00 0.00 C ATOM 546 CE LYS 56 -11.284 -4.866 -4.546 1.00 0.00 C ATOM 547 NZ LYS 56 -11.748 -5.374 -5.859 1.00 0.00 N ATOM 552 N GLU 57 -8.458 -6.534 0.997 1.00 0.00 N ATOM 553 CA GLU 57 -7.331 -5.958 1.671 1.00 0.00 C ATOM 554 C GLU 57 -5.990 -6.360 1.104 1.00 0.00 C ATOM 555 O GLU 57 -5.125 -5.469 0.911 1.00 0.00 O ATOM 556 CB GLU 57 -7.445 -4.448 1.817 1.00 0.00 C ATOM 557 CG GLU 57 -6.340 -3.737 2.559 1.00 0.00 C ATOM 558 CD GLU 57 -6.817 -2.427 3.169 1.00 0.00 C ATOM 559 OE1 GLU 57 -7.059 -1.441 2.449 1.00 0.00 O ATOM 560 OE2 GLU 57 -7.028 -2.428 4.391 1.00 0.00 O ATOM 562 N PHE 58 -5.619 -7.642 1.190 1.00 0.00 N ATOM 563 CA PHE 58 -4.308 -8.057 0.752 1.00 0.00 C ATOM 564 C PHE 58 -4.192 -8.262 -0.726 1.00 0.00 C ATOM 565 O PHE 58 -3.338 -7.630 -1.366 1.00 0.00 O ATOM 566 CB PHE 58 -3.789 -9.272 1.538 1.00 0.00 C ATOM 567 CG PHE 58 -2.326 -9.546 1.216 1.00 0.00 C ATOM 568 CD1 PHE 58 -1.763 -9.052 0.034 1.00 0.00 C ATOM 569 CD2 PHE 58 -1.674 -10.559 1.899 1.00 0.00 C ATOM 570 CE1 PHE 58 -0.438 -9.362 -0.269 1.00 0.00 C ATOM 571 CE2 PHE 58 -0.337 -10.858 1.598 1.00 0.00 C ATOM 572 CZ PHE 58 0.294 -10.256 0.501 1.00 0.00 C ATOM 574 N ILE 59 -5.052 -9.123 -1.297 1.00 0.00 N ATOM 575 CA ILE 59 -4.810 -9.583 -2.691 1.00 0.00 C ATOM 576 C ILE 59 -4.769 -8.374 -3.597 1.00 0.00 C ATOM 577 O ILE 59 -3.874 -8.282 -4.473 1.00 0.00 O ATOM 578 CB ILE 59 -5.946 -10.507 -3.108 1.00 0.00 C ATOM 579 CG1 ILE 59 -5.987 -11.786 -2.293 1.00 0.00 C ATOM 580 CG2 ILE 59 -5.896 -10.839 -4.609 1.00 0.00 C ATOM 581 CD1 ILE 59 -4.713 -12.600 -2.385 1.00 0.00 C ATOM 583 N GLU 60 -5.820 -7.562 -3.597 1.00 0.00 N ATOM 584 CA GLU 60 -5.869 -6.505 -4.634 1.00 0.00 C ATOM 585 C GLU 60 -5.296 -5.226 -4.008 1.00 0.00 C ATOM 586 O GLU 60 -4.528 -4.517 -4.657 1.00 0.00 O ATOM 587 CB GLU 60 -7.280 -6.309 -5.156 1.00 0.00 C ATOM 588 CG GLU 60 -7.574 -6.944 -6.498 1.00 0.00 C ATOM 589 CD GLU 60 -8.665 -6.233 -7.281 1.00 0.00 C ATOM 590 OE1 GLU 60 -8.409 -5.171 -7.865 1.00 0.00 O ATOM 591 OE2 GLU 60 -9.771 -6.823 -7.315 1.00 0.00 O ATOM 593 N GLY 61 -5.762 -4.908 -2.792 1.00 0.00 N ATOM 594 CA GLY 61 -5.353 -3.627 -2.198 1.00 0.00 C ATOM 595 C GLY 61 -3.831 -3.555 -2.047 1.00 0.00 C ATOM 596 O GLY 61 -3.319 -2.456 -2.359 1.00 0.00 O ATOM 598 N LEU 62 -3.305 -4.308 -1.070 1.00 0.00 N ATOM 599 CA LEU 62 -1.897 -4.207 -0.774 1.00 0.00 C ATOM 600 C LEU 62 -1.085 -4.527 -2.034 1.00 0.00 C ATOM 601 O LEU 62 -0.396 -3.680 -2.614 1.00 0.00 O ATOM 602 CB LEU 62 -1.510 -5.151 0.373 1.00 0.00 C ATOM 603 CG LEU 62 -1.692 -4.572 1.777 1.00 0.00 C ATOM 604 CD1 LEU 62 -1.867 -5.600 2.868 1.00 0.00 C ATOM 605 CD2 LEU 62 -0.463 -3.788 2.172 1.00 0.00 C ATOM 607 N GLY 63 -1.407 -5.699 -2.616 1.00 0.00 N ATOM 608 CA GLY 63 -0.962 -6.028 -3.950 1.00 0.00 C ATOM 609 C GLY 63 -0.229 -7.372 -3.953 1.00 0.00 C ATOM 610 O GLY 63 0.905 -7.509 -3.439 1.00 0.00 O ATOM 612 N TYR 64 -0.935 -8.445 -4.336 1.00 0.00 N ATOM 613 CA TYR 64 -0.400 -9.792 -4.103 1.00 0.00 C ATOM 614 C TYR 64 0.592 -10.123 -5.222 1.00 0.00 C ATOM 615 O TYR 64 0.429 -9.715 -6.387 1.00 0.00 O ATOM 616 CB TYR 64 -1.588 -10.782 -4.141 1.00 0.00 C ATOM 617 CG TYR 64 -1.260 -12.097 -3.474 1.00 0.00 C ATOM 618 CD1 TYR 64 -1.333 -12.227 -2.082 1.00 0.00 C ATOM 619 CD2 TYR 64 -0.947 -13.236 -4.214 1.00 0.00 C ATOM 620 CE1 TYR 64 -1.327 -13.468 -1.465 1.00 0.00 C ATOM 621 CE2 TYR 64 -0.843 -14.485 -3.573 1.00 0.00 C ATOM 622 CZ TYR 64 -0.935 -14.587 -2.185 1.00 0.00 C ATOM 623 OH TYR 64 -0.808 -15.814 -1.587 1.00 0.00 O ATOM 626 N SER 65 1.820 -10.481 -4.816 1.00 0.00 N ATOM 627 CA SER 65 2.921 -10.477 -5.794 1.00 0.00 C ATOM 628 C SER 65 3.123 -11.877 -6.340 1.00 0.00 C ATOM 629 O SER 65 2.723 -12.843 -5.708 1.00 0.00 O ATOM 630 CB SER 65 4.190 -9.927 -5.152 1.00 0.00 C ATOM 631 OG SER 65 4.916 -10.897 -4.432 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 498 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 75.94 62.1 124 100.0 124 ARMSMC SECONDARY STRUCTURE . . 65.64 69.5 82 100.0 82 ARMSMC SURFACE . . . . . . . . 83.03 56.7 90 100.0 90 ARMSMC BURIED . . . . . . . . 52.77 76.5 34 100.0 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.36 50.0 50 100.0 50 ARMSSC1 RELIABLE SIDE CHAINS . 79.64 46.8 47 100.0 47 ARMSSC1 SECONDARY STRUCTURE . . 72.64 53.1 32 100.0 32 ARMSSC1 SURFACE . . . . . . . . 83.16 41.0 39 100.0 39 ARMSSC1 BURIED . . . . . . . . 51.83 81.8 11 100.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 87.97 36.6 41 100.0 41 ARMSSC2 RELIABLE SIDE CHAINS . 88.70 36.1 36 100.0 36 ARMSSC2 SECONDARY STRUCTURE . . 92.70 37.0 27 100.0 27 ARMSSC2 SURFACE . . . . . . . . 90.23 36.7 30 100.0 30 ARMSSC2 BURIED . . . . . . . . 81.46 36.4 11 100.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 54.98 58.8 17 100.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 49.23 66.7 15 100.0 15 ARMSSC3 SECONDARY STRUCTURE . . 58.73 63.6 11 100.0 11 ARMSSC3 SURFACE . . . . . . . . 56.59 56.2 16 100.0 16 ARMSSC3 BURIED . . . . . . . . 11.85 100.0 1 100.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 73.58 33.3 9 100.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 73.58 33.3 9 100.0 9 ARMSSC4 SECONDARY STRUCTURE . . 67.18 40.0 5 100.0 5 ARMSSC4 SURFACE . . . . . . . . 73.58 33.3 9 100.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.22 (Number of atoms: 63) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.22 63 100.0 63 CRMSCA CRN = ALL/NP . . . . . 0.1939 CRMSCA SECONDARY STRUCTURE . . 11.53 41 100.0 41 CRMSCA SURFACE . . . . . . . . 12.73 46 100.0 46 CRMSCA BURIED . . . . . . . . 10.70 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.24 309 100.0 309 CRMSMC SECONDARY STRUCTURE . . 11.65 201 100.0 201 CRMSMC SURFACE . . . . . . . . 12.72 226 100.0 226 CRMSMC BURIED . . . . . . . . 10.82 83 100.0 83 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 13.59 246 32.8 750 CRMSSC RELIABLE SIDE CHAINS . 13.40 226 31.0 730 CRMSSC SECONDARY STRUCTURE . . 12.93 158 32.6 484 CRMSSC SURFACE . . . . . . . . 14.48 184 33.2 554 CRMSSC BURIED . . . . . . . . 10.49 62 31.6 196 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.90 498 49.7 1002 CRMSALL SECONDARY STRUCTURE . . 12.27 322 49.7 648 CRMSALL SURFACE . . . . . . . . 13.58 368 49.9 738 CRMSALL BURIED . . . . . . . . 10.76 130 49.2 264 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.021 1.000 0.500 63 100.0 63 ERRCA SECONDARY STRUCTURE . . 10.107 1.000 0.500 41 100.0 41 ERRCA SURFACE . . . . . . . . 11.915 1.000 0.500 46 100.0 46 ERRCA BURIED . . . . . . . . 8.603 1.000 0.500 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.013 1.000 0.500 309 100.0 309 ERRMC SECONDARY STRUCTURE . . 10.155 1.000 0.500 201 100.0 201 ERRMC SURFACE . . . . . . . . 11.811 1.000 0.500 226 100.0 226 ERRMC BURIED . . . . . . . . 8.840 1.000 0.500 83 100.0 83 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 12.198 1.000 0.500 246 32.8 750 ERRSC RELIABLE SIDE CHAINS . 12.020 1.000 0.500 226 31.0 730 ERRSC SECONDARY STRUCTURE . . 11.600 1.000 0.500 158 32.6 484 ERRSC SURFACE . . . . . . . . 13.481 1.000 0.500 184 33.2 554 ERRSC BURIED . . . . . . . . 8.390 1.000 0.500 62 31.6 196 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 11.560 1.000 0.500 498 49.7 1002 ERRALL SECONDARY STRUCTURE . . 10.806 1.000 0.500 322 49.7 648 ERRALL SURFACE . . . . . . . . 12.583 1.000 0.500 368 49.9 738 ERRALL BURIED . . . . . . . . 8.664 1.000 0.500 130 49.2 264 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 10 31 63 63 DISTCA CA (P) 0.00 0.00 1.59 15.87 49.21 63 DISTCA CA (RMS) 0.00 0.00 2.36 4.38 7.08 DISTCA ALL (N) 1 2 11 57 235 498 1002 DISTALL ALL (P) 0.10 0.20 1.10 5.69 23.45 1002 DISTALL ALL (RMS) 0.80 1.49 2.42 3.98 7.01 DISTALL END of the results output