####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # ERROR! Check molecule: 1 and the amino acid number 5 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 5 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 6 and name ARG # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 6 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 11 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 11 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 56 and name LYS # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 56 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 60 and name GLU # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 60 (molecule: 1) # Only one atom (first) is used for calculations. # ERROR! Check molecule: 1 and the amino acid number 61 and name GLY # This number or some atom positions within this amino acid are duplicated. # WARNING! There is CA atom duplicated inside the residue 61 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 5 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 6 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 11 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 56 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 60 (molecule: 1) # Only one atom (first) is used for calculations. # WARNING! There is CA atom duplicated inside the residue 61 (molecule: 1) # Only one atom (first) is used for calculations. # Molecule1: number of CA atoms 62 ( 254), selected 62 , name T0553AL396_1-D1 # Molecule2: number of CA atoms 63 ( 1002), selected 62 , name T0553-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0553AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 35 - 65 4.62 18.38 LCS_AVERAGE: 47.62 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 11 - 29 1.99 12.10 LCS_AVERAGE: 18.23 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 13 - 29 0.67 12.33 LCS_AVERAGE: 13.67 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 62 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT V 3 V 3 3 4 29 3 4 4 4 4 5 6 7 8 10 14 14 17 19 26 29 37 40 43 46 LCS_GDT F 4 F 4 3 4 29 3 4 4 4 4 5 11 12 12 14 15 16 19 20 35 36 37 41 44 46 LCS_GDT K 5 K 5 3 4 29 3 4 4 4 6 7 8 10 10 12 27 30 33 34 35 36 37 42 44 46 LCS_GDT R 6 R 6 3 6 29 3 3 4 4 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT V 7 V 7 3 6 29 3 3 4 5 8 12 13 16 19 20 25 29 33 34 35 38 39 42 44 46 LCS_GDT A 8 A 8 5 6 29 4 4 5 5 6 12 12 12 15 15 17 19 21 22 25 34 38 42 44 46 LCS_GDT G 9 G 9 5 6 29 4 4 5 5 5 7 8 10 13 13 13 16 25 31 35 38 38 42 44 46 LCS_GDT I 10 I 10 5 6 29 4 4 5 5 8 12 13 15 18 20 26 30 33 34 35 38 39 42 44 46 LCS_GDT K 11 K 11 5 18 29 4 4 5 7 10 16 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT D 12 D 12 5 18 29 3 4 5 7 11 16 17 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT K 13 K 13 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 36 37 42 44 46 LCS_GDT A 14 A 14 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 36 37 42 44 46 LCS_GDT A 15 A 15 16 18 29 8 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT I 16 I 16 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT K 17 K 17 16 18 29 10 15 15 16 16 17 18 20 22 24 27 30 33 34 35 36 38 42 44 46 LCS_GDT T 18 T 18 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT L 19 L 19 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT I 20 I 20 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT S 21 S 21 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT A 22 A 22 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT A 23 A 23 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT Y 24 Y 24 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT R 25 R 25 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT Q 26 Q 26 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT I 27 I 27 16 18 29 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 36 37 42 44 46 LCS_GDT E 29 E 29 16 18 29 0 8 15 16 16 17 18 20 22 24 27 30 33 34 35 36 38 42 44 46 LCS_GDT R 30 R 30 4 17 29 3 4 4 6 11 15 17 20 22 24 27 30 33 34 35 38 39 42 44 46 LCS_GDT D 31 D 31 4 6 29 3 4 4 4 5 7 10 11 14 17 26 30 33 34 35 38 39 42 44 46 LCS_GDT I 32 I 32 4 6 29 4 4 4 5 6 8 12 16 21 23 27 30 33 34 35 38 39 42 44 46 LCS_GDT A 33 A 33 4 6 29 4 4 4 5 6 9 14 17 19 21 23 30 33 34 35 38 39 42 44 46 LCS_GDT P 34 P 34 4 6 29 4 4 4 5 6 9 13 16 18 20 23 29 33 34 35 38 39 42 44 46 LCS_GDT Y 35 Y 35 4 6 31 4 4 4 6 7 9 13 16 18 20 24 26 29 33 35 38 39 42 44 46 LCS_GDT I 36 I 36 3 7 31 1 3 5 6 7 11 14 18 20 21 24 27 29 33 35 38 39 42 44 46 LCS_GDT A 37 A 37 5 10 31 4 5 6 8 9 13 15 18 20 22 24 27 29 32 35 38 39 42 44 46 LCS_GDT Q 38 Q 38 5 10 31 4 5 6 8 9 13 15 17 20 22 24 27 29 32 35 38 39 42 44 45 LCS_GDT N 39 N 39 5 10 31 4 5 6 8 9 13 15 17 20 22 24 27 29 32 35 38 39 42 44 45 LCS_GDT E 40 E 40 5 10 31 4 5 6 8 9 13 15 18 20 22 24 27 29 32 35 38 39 42 44 46 LCS_GDT F 41 F 41 6 10 31 6 6 6 8 10 13 15 18 20 22 24 27 29 32 35 38 39 42 44 46 LCS_GDT S 42 S 42 6 10 31 6 6 6 8 10 13 15 18 20 22 24 27 29 32 35 38 39 42 44 45 LCS_GDT G 43 G 43 6 10 31 6 6 6 8 10 13 15 18 20 22 24 27 29 32 35 38 39 42 44 45 LCS_GDT W 44 W 44 6 10 31 6 6 6 8 10 13 15 18 20 22 24 27 29 32 35 38 39 42 44 46 LCS_GDT E 45 E 45 6 10 31 6 6 6 8 10 13 15 18 20 22 24 27 29 32 35 38 39 42 44 45 LCS_GDT S 46 S 46 6 10 31 6 6 6 8 10 11 15 18 20 22 24 27 29 30 34 35 38 42 44 45 LCS_GDT K 47 K 47 5 10 31 4 4 5 7 10 11 13 14 14 19 23 27 29 31 35 38 39 42 44 45 LCS_GDT L 48 L 48 5 9 31 4 4 5 7 10 11 13 14 18 19 23 26 29 32 35 38 39 42 44 46 LCS_GDT G 49 G 49 5 9 31 4 4 5 7 10 11 14 17 19 22 24 27 29 31 34 36 39 42 44 45 LCS_GDT N 50 N 50 3 5 31 3 3 3 4 5 7 9 13 16 19 23 26 29 32 35 38 39 42 44 45 LCS_GDT G 51 G 51 4 5 31 3 3 4 4 10 11 15 18 20 22 24 27 29 31 34 35 39 42 44 45 LCS_GDT E 52 E 52 4 5 31 3 3 4 4 7 13 14 18 20 22 24 27 29 32 35 38 39 42 44 45 LCS_GDT I 53 I 53 4 5 31 3 3 4 4 7 13 15 18 20 22 24 27 29 31 35 38 39 42 44 46 LCS_GDT T 54 T 54 4 12 31 1 3 4 7 9 13 15 18 20 22 24 27 29 30 32 35 37 42 44 46 LCS_GDT V 55 V 55 11 12 31 8 11 11 11 11 12 14 18 20 22 24 27 29 30 31 33 37 42 44 46 LCS_GDT K 56 K 56 11 12 31 8 11 11 11 11 12 14 17 19 21 24 27 29 30 31 33 37 41 43 46 LCS_GDT E 57 E 57 11 12 31 8 11 11 11 11 12 14 17 19 21 24 27 31 33 35 36 37 42 44 46 LCS_GDT F 58 F 58 11 12 31 8 11 11 11 11 12 15 18 20 22 24 29 31 34 35 36 37 42 44 46 LCS_GDT I 59 I 59 11 12 31 8 11 11 11 11 12 14 17 20 22 27 30 33 34 35 36 37 42 44 46 LCS_GDT E 60 E 60 11 12 31 8 11 11 11 11 12 14 17 19 24 27 30 33 34 35 36 37 41 43 46 LCS_GDT G 61 G 61 11 12 31 8 11 11 11 11 12 14 18 20 24 27 30 33 34 35 36 37 41 44 46 LCS_GDT L 62 L 62 11 12 31 8 11 11 11 11 13 15 18 20 22 24 28 33 34 35 36 37 41 43 45 LCS_GDT G 63 G 63 11 12 31 4 11 11 11 11 12 14 20 22 24 27 30 33 34 35 36 37 40 43 44 LCS_GDT Y 64 Y 64 11 12 31 4 11 11 11 11 12 14 20 22 24 27 30 33 34 35 36 37 40 43 44 LCS_GDT S 65 S 65 11 12 31 4 11 11 11 11 12 14 18 20 22 24 27 29 30 31 33 35 36 38 43 LCS_AVERAGE LCS_A: 26.51 ( 13.67 18.23 47.62 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 15 15 16 16 17 18 20 22 24 27 30 33 34 35 38 39 42 44 46 GDT PERCENT_AT 19.05 23.81 23.81 25.40 25.40 26.98 28.57 31.75 34.92 38.10 42.86 47.62 52.38 53.97 55.56 60.32 61.90 66.67 69.84 73.02 GDT RMS_LOCAL 0.36 0.43 0.43 0.67 0.67 1.08 1.69 2.35 2.81 3.30 3.82 4.40 4.71 4.87 5.00 5.64 5.80 6.08 6.25 6.90 GDT RMS_ALL_AT 12.24 12.26 12.26 12.33 12.33 12.40 12.26 11.90 12.42 12.18 12.06 11.78 11.58 11.38 11.43 11.23 11.27 11.20 11.09 9.54 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA V 3 V 3 11.839 3 0.576 0.576 14.609 0.119 0.068 LGA F 4 F 4 10.731 7 0.599 0.599 11.513 2.500 0.909 LGA K 5 K 5 7.644 5 0.707 0.707 9.046 11.786 5.238 LGA R 6 R 6 2.579 7 0.593 0.593 3.715 53.690 19.524 LGA V 7 V 7 7.406 3 0.657 0.657 9.251 10.119 5.782 LGA A 8 A 8 10.818 1 0.225 0.225 11.037 0.357 0.286 LGA G 9 G 9 10.872 0 0.542 0.542 11.792 0.000 0.000 LGA I 10 I 10 8.334 4 0.520 0.520 8.428 10.000 5.000 LGA K 11 K 11 4.572 5 0.659 0.659 6.121 27.976 12.434 LGA D 12 D 12 4.664 4 0.169 0.169 4.664 44.167 22.083 LGA K 13 K 13 2.080 5 0.685 0.685 2.080 75.238 33.439 LGA A 14 A 14 1.075 1 0.067 0.067 1.406 81.429 65.143 LGA A 15 A 15 1.354 1 0.067 0.067 1.626 79.286 63.429 LGA I 16 I 16 1.488 4 0.119 0.119 1.488 81.429 40.714 LGA K 17 K 17 1.439 5 0.091 0.091 1.439 81.429 36.190 LGA T 18 T 18 1.099 3 0.025 0.025 1.173 81.429 46.531 LGA L 19 L 19 1.513 4 0.045 0.045 1.513 79.286 39.643 LGA I 20 I 20 1.126 4 0.034 0.034 1.264 85.952 42.976 LGA S 21 S 21 0.590 2 0.093 0.093 0.770 92.857 61.905 LGA A 22 A 22 1.158 1 0.062 0.062 1.165 83.690 66.952 LGA A 23 A 23 1.334 1 0.103 0.103 1.334 81.429 65.143 LGA Y 24 Y 24 1.004 8 0.067 0.067 1.096 85.952 28.651 LGA R 25 R 25 1.118 7 0.110 0.110 1.726 81.548 29.654 LGA Q 26 Q 26 0.959 5 0.152 0.152 0.959 90.476 40.212 LGA I 27 I 27 0.838 4 0.119 0.119 0.853 90.476 45.238 LGA E 29 E 29 3.181 5 0.523 0.523 3.181 57.500 25.556 LGA R 30 R 30 5.192 7 0.611 0.611 6.965 26.667 9.697 LGA D 31 D 31 9.596 4 0.572 0.572 9.596 3.333 1.667 LGA I 32 I 32 7.245 4 0.461 0.461 9.531 5.119 2.560 LGA A 33 A 33 10.564 1 0.628 0.628 10.564 0.714 0.571 LGA P 34 P 34 10.553 3 0.222 0.222 11.243 0.000 0.000 LGA Y 35 Y 35 13.714 8 0.667 0.667 14.734 0.000 0.000 LGA I 36 I 36 12.780 4 0.583 0.583 13.072 0.000 0.000 LGA A 37 A 37 17.120 1 0.060 0.060 18.297 0.000 0.000 LGA Q 38 Q 38 22.088 5 0.121 0.121 22.500 0.000 0.000 LGA N 39 N 39 19.207 4 0.097 0.097 19.836 0.000 0.000 LGA E 40 E 40 14.028 5 0.058 0.058 15.586 0.000 0.000 LGA F 41 F 41 16.505 7 0.306 0.306 18.598 0.000 0.000 LGA S 42 S 42 21.910 2 0.090 0.090 22.799 0.000 0.000 LGA G 43 G 43 20.090 0 0.062 0.062 20.204 0.000 0.000 LGA W 44 W 44 15.421 10 0.080 0.080 16.858 0.000 0.000 LGA E 45 E 45 19.630 5 0.090 0.090 20.909 0.000 0.000 LGA S 46 S 46 23.703 2 0.095 0.095 23.703 0.000 0.000 LGA K 47 K 47 19.601 5 0.119 0.119 20.577 0.000 0.000 LGA L 48 L 48 14.070 4 0.102 0.102 15.830 0.000 0.000 LGA G 49 G 49 20.030 0 0.406 0.406 20.834 0.000 0.000 LGA N 50 N 50 20.511 4 0.026 0.026 20.869 0.000 0.000 LGA G 51 G 51 20.774 0 0.203 0.203 20.774 0.000 0.000 LGA E 52 E 52 20.528 5 0.043 0.043 20.528 0.000 0.000 LGA I 53 I 53 14.383 4 0.590 0.590 16.575 0.000 0.000 LGA T 54 T 54 13.096 3 0.103 0.103 14.155 0.000 0.000 LGA V 55 V 55 13.193 3 0.021 0.021 14.318 0.000 0.000 LGA K 56 K 56 11.963 5 0.045 0.045 12.600 0.119 0.053 LGA E 57 E 57 10.496 5 0.087 0.087 11.208 0.833 0.370 LGA F 58 F 58 9.985 7 0.035 0.035 10.280 2.024 0.736 LGA I 59 I 59 7.929 4 0.052 0.052 8.712 8.333 4.167 LGA E 60 E 60 7.408 5 0.033 0.033 7.690 10.952 4.868 LGA G 61 G 61 7.408 0 0.124 0.124 7.549 9.286 9.286 LGA L 62 L 62 7.985 4 0.034 0.034 8.304 6.548 3.274 LGA G 63 G 63 6.730 0 0.192 0.192 8.011 10.357 10.357 LGA Y 64 Y 64 6.846 8 0.187 0.187 7.800 10.238 3.413 LGA S 65 S 65 10.282 2 0.587 0.587 12.543 0.714 0.476 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 62 248 248 100.00 487 248 50.92 63 SUMMARY(RMSD_GDC): 9.293 9.305 9.305 24.847 13.559 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 62 63 4.0 20 2.35 35.317 30.351 0.818 LGA_LOCAL RMSD: 2.346 Number of atoms: 20 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.905 Number of assigned atoms: 62 Std_ASGN_ATOMS RMSD: 9.293 Standard rmsd on all 62 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.157747 * X + 0.575079 * Y + -0.802745 * Z + -16.419237 Y_new = 0.942271 * X + 0.330817 * Y + 0.051829 * Z + -13.197388 Z_new = 0.295368 * X + -0.748227 * Y + -0.594065 * Z + -25.868015 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.736669 -0.299840 -2.241846 [DEG: 99.5038 -17.1796 -128.4483 ] ZXZ: -1.635272 2.206900 2.765615 [DEG: -93.6942 126.4460 158.4581 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0553AL396_1-D1 REMARK 2: T0553-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0553AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 62 63 4.0 20 2.35 30.351 9.29 REMARK ---------------------------------------------------------- MOLECULE T0553AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 3cs1_A ATOM 10 N VAL 3 3.758 8.545 -15.570 1.00 0.00 N ATOM 11 CA VAL 3 4.656 8.230 -14.475 1.00 0.00 C ATOM 12 C VAL 3 4.356 6.846 -13.889 1.00 0.00 C ATOM 13 O VAL 3 5.242 5.982 -13.759 1.00 0.00 O ATOM 14 N PHE 4 3.092 6.659 -13.541 1.00 0.00 N ATOM 15 CA PHE 4 2.599 5.460 -12.936 1.00 0.00 C ATOM 16 C PHE 4 2.930 4.190 -13.717 1.00 0.00 C ATOM 17 O PHE 4 3.377 3.203 -13.104 1.00 0.00 O ATOM 18 N LYS 5 2.742 4.202 -15.037 1.00 0.00 N ATOM 19 CA LYS 5 3.052 3.036 -15.869 1.00 0.00 C ATOM 20 CA LYS 5 3.049 3.019 -15.849 1.00 0.00 C ATOM 21 C LYS 5 4.542 2.651 -15.860 1.00 0.00 C ATOM 22 O LYS 5 4.929 1.577 -16.356 1.00 0.00 O ATOM 23 N ARG 6 5.387 3.543 -15.346 1.00 0.00 N ATOM 24 CA ARG 6 6.836 3.322 -15.283 1.00 0.00 C ATOM 25 CA ARG 6 6.820 3.277 -15.287 1.00 0.00 C ATOM 26 C ARG 6 7.164 2.978 -13.835 1.00 0.00 C ATOM 27 O ARG 6 7.995 2.109 -13.554 1.00 0.00 O ATOM 28 N VAL 7 6.478 3.657 -12.927 1.00 0.00 N ATOM 29 CA VAL 7 6.629 3.455 -11.488 1.00 0.00 C ATOM 30 C VAL 7 6.236 2.079 -10.952 1.00 0.00 C ATOM 31 O VAL 7 6.918 1.553 -10.054 1.00 0.00 O ATOM 32 N ALA 8 5.140 1.509 -11.451 1.00 0.00 N ATOM 33 CA ALA 8 4.697 0.219 -10.949 1.00 0.00 C ATOM 34 C ALA 8 5.383 -0.850 -11.759 1.00 0.00 C ATOM 35 O ALA 8 5.276 -0.845 -12.967 1.00 0.00 O ATOM 36 N GLY 9 6.179 -1.711 -11.098 1.00 0.00 N ATOM 37 CA GLY 9 6.913 -2.807 -11.749 1.00 0.00 C ATOM 38 C GLY 9 6.030 -4.072 -11.863 1.00 0.00 C ATOM 39 O GLY 9 5.945 -4.890 -10.922 1.00 0.00 O ATOM 40 N ILE 10 5.370 -4.180 -13.016 1.00 0.00 N ATOM 41 CA ILE 10 4.314 -5.124 -13.286 1.00 0.00 C ATOM 42 C ILE 10 4.813 -6.295 -14.167 1.00 0.00 C ATOM 43 O ILE 10 4.176 -7.340 -14.241 1.00 0.00 O ATOM 44 N LYS 11 5.962 -6.087 -14.808 1.00 0.00 N ATOM 45 CA LYS 11 6.527 -7.001 -15.806 1.00 0.00 C ATOM 46 CA LYS 11 6.453 -7.029 -15.812 1.00 0.00 C ATOM 47 C LYS 11 7.075 -8.289 -15.193 1.00 0.00 C ATOM 48 O LYS 11 7.460 -8.315 -14.019 1.00 0.00 O ATOM 49 N ASP 12 7.107 -9.343 -16.003 1.00 0.00 N ATOM 50 CA ASP 12 7.659 -10.615 -15.647 1.00 0.00 C ATOM 51 C ASP 12 9.102 -10.587 -16.165 1.00 0.00 C ATOM 52 O ASP 12 9.424 -11.140 -17.228 1.00 0.00 O ATOM 53 N LYS 13 9.952 -9.862 -15.439 1.00 0.00 N ATOM 54 CA LYS 13 11.378 -9.811 -15.716 1.00 0.00 C ATOM 55 C LYS 13 12.093 -9.891 -14.368 1.00 0.00 C ATOM 56 O LYS 13 11.467 -9.659 -13.303 1.00 0.00 O ATOM 57 N ALA 14 13.377 -10.243 -14.397 1.00 0.00 N ATOM 58 CA ALA 14 14.206 -10.185 -13.196 1.00 0.00 C ATOM 59 C ALA 14 14.347 -8.733 -12.737 1.00 0.00 C ATOM 60 O ALA 14 14.364 -8.456 -11.551 1.00 0.00 O ATOM 61 N ALA 15 14.464 -7.822 -13.697 1.00 0.00 N ATOM 62 CA ALA 15 14.589 -6.380 -13.454 1.00 0.00 C ATOM 63 C ALA 15 13.427 -5.828 -12.582 1.00 0.00 C ATOM 64 O ALA 15 13.657 -5.146 -11.547 1.00 0.00 O ATOM 65 N ILE 16 12.201 -6.195 -12.961 1.00 0.00 N ATOM 66 CA ILE 16 10.978 -5.833 -12.235 1.00 0.00 C ATOM 67 C ILE 16 10.829 -6.593 -10.919 1.00 0.00 C ATOM 68 O ILE 16 10.227 -6.105 -9.955 1.00 0.00 O ATOM 69 N LYS 17 11.324 -7.828 -10.916 1.00 0.00 N ATOM 70 CA LYS 17 11.251 -8.668 -9.739 1.00 0.00 C ATOM 71 C LYS 17 11.994 -8.003 -8.579 1.00 0.00 C ATOM 72 O LYS 17 11.497 -7.975 -7.449 1.00 0.00 O ATOM 73 N THR 18 13.154 -7.420 -8.857 1.00 0.00 N ATOM 74 CA THR 18 13.864 -6.716 -7.813 1.00 0.00 C ATOM 75 C THR 18 13.182 -5.407 -7.404 1.00 0.00 C ATOM 76 O THR 18 13.152 -5.026 -6.216 1.00 0.00 O ATOM 77 N LEU 19 12.648 -4.695 -8.379 1.00 0.00 N ATOM 78 CA LEU 19 11.965 -3.440 -8.073 1.00 0.00 C ATOM 79 C LEU 19 10.795 -3.698 -7.130 1.00 0.00 C ATOM 80 O LEU 19 10.439 -2.869 -6.288 1.00 0.00 O ATOM 81 N ILE 20 10.231 -4.874 -7.243 1.00 0.00 N ATOM 82 CA ILE 20 9.111 -5.242 -6.398 1.00 0.00 C ATOM 83 C ILE 20 9.489 -5.448 -4.949 1.00 0.00 C ATOM 84 O ILE 20 8.742 -5.083 -4.070 1.00 0.00 O ATOM 85 N SER 21 10.624 -6.090 -4.714 1.00 0.00 N ATOM 86 CA SER 21 11.212 -6.191 -3.370 1.00 0.00 C ATOM 87 C SER 21 11.410 -4.773 -2.774 1.00 0.00 C ATOM 88 O SER 21 10.907 -4.481 -1.689 1.00 0.00 O ATOM 89 N ALA 22 12.129 -3.906 -3.503 1.00 0.00 N ATOM 90 CA ALA 22 12.423 -2.539 -3.092 1.00 0.00 C ATOM 91 C ALA 22 11.157 -1.814 -2.698 1.00 0.00 C ATOM 92 O ALA 22 11.046 -1.302 -1.588 1.00 0.00 O ATOM 93 N ALA 23 10.171 -1.846 -3.593 1.00 0.00 N ATOM 94 CA ALA 23 8.801 -1.385 -3.338 1.00 0.00 C ATOM 95 C ALA 23 8.103 -2.017 -2.126 1.00 0.00 C ATOM 96 O ALA 23 7.557 -1.296 -1.298 1.00 0.00 O ATOM 97 N TYR 24 8.141 -3.346 -1.990 1.00 0.00 N ATOM 98 CA TYR 24 7.583 -4.001 -0.761 1.00 0.00 C ATOM 99 C TYR 24 8.209 -3.552 0.555 1.00 0.00 C ATOM 100 O TYR 24 7.520 -3.371 1.552 1.00 0.00 O ATOM 101 N ARG 25 9.517 -3.318 0.553 1.00 0.00 N ATOM 102 CA ARG 25 10.176 -2.803 1.771 1.00 0.00 C ATOM 103 C ARG 25 9.725 -1.394 2.151 1.00 0.00 C ATOM 104 O ARG 25 9.631 -1.064 3.331 1.00 0.00 O ATOM 105 N GLN 26 9.405 -0.571 1.158 1.00 0.00 N ATOM 106 CA GLN 26 8.876 0.779 1.437 1.00 0.00 C ATOM 107 C GLN 26 7.476 0.783 2.078 1.00 0.00 C ATOM 108 O GLN 26 7.119 1.726 2.781 1.00 0.00 O ATOM 109 N ILE 27 6.681 -0.237 1.759 1.00 0.00 N ATOM 110 CA ILE 27 5.324 -0.439 2.287 1.00 0.00 C ATOM 111 C ILE 27 5.364 -1.082 3.683 1.00 0.00 C ATOM 112 O ILE 27 4.639 -0.648 4.597 1.00 0.00 O ATOM 113 N GLU 29 6.194 -2.125 3.825 1.00 0.00 N ATOM 114 CA GLU 29 6.319 -2.894 5.069 1.00 0.00 C ATOM 115 C GLU 29 7.228 -2.236 6.116 1.00 0.00 C ATOM 116 O GLU 29 8.294 -2.747 6.447 1.00 0.00 O ATOM 117 N ARG 30 6.803 -1.073 6.591 1.00 0.00 N ATOM 118 CA ARG 30 7.523 -0.303 7.593 1.00 0.00 C ATOM 119 C ARG 30 7.680 -1.063 8.907 1.00 0.00 C ATOM 120 O ARG 30 8.705 -0.964 9.587 1.00 0.00 O ATOM 121 N ASP 31 6.668 -1.854 9.259 1.00 0.00 N ATOM 122 CA ASP 31 6.781 -2.620 10.481 1.00 0.00 C ATOM 123 C ASP 31 7.573 -3.924 10.298 1.00 0.00 C ATOM 124 O ASP 31 7.817 -4.633 11.249 1.00 0.00 O ATOM 125 N ILE 32 7.980 -4.218 9.071 1.00 0.00 N ATOM 126 CA ILE 32 8.776 -5.413 8.785 1.00 0.00 C ATOM 127 C ILE 32 8.176 -6.710 9.282 1.00 0.00 C ATOM 128 O ILE 32 8.912 -7.599 9.738 1.00 0.00 O ATOM 129 N ALA 33 6.848 -6.808 9.215 1.00 0.00 N ATOM 130 CA ALA 33 6.133 -8.010 9.578 1.00 0.00 C ATOM 131 C ALA 33 5.939 -8.886 8.349 1.00 0.00 C ATOM 132 O ALA 33 5.615 -10.072 8.455 1.00 0.00 O ATOM 133 N PRO 34 6.129 -8.307 7.177 1.00 0.00 N ATOM 134 CA PRO 34 5.806 -9.019 5.949 1.00 0.00 C ATOM 135 C PRO 34 4.326 -9.324 5.773 1.00 0.00 C ATOM 136 O PRO 34 3.969 -10.093 4.892 1.00 0.00 O ATOM 137 N TYR 35 3.486 -8.719 6.612 1.00 0.00 N ATOM 138 CA TYR 35 2.024 -8.815 6.502 1.00 0.00 C ATOM 139 C TYR 35 1.490 -7.401 6.460 1.00 0.00 C ATOM 140 O TYR 35 1.826 -6.581 7.345 1.00 0.00 O ATOM 141 N ILE 36 0.690 -7.085 5.442 1.00 0.00 N ATOM 142 CA ILE 36 0.138 -5.749 5.372 1.00 0.00 C ATOM 143 C ILE 36 -1.383 -5.730 5.450 1.00 0.00 C ATOM 144 O ILE 36 -2.107 -6.352 4.636 1.00 0.00 O ATOM 145 N ALA 37 -4.898 -3.366 5.369 1.00 0.00 N ATOM 146 CA ALA 37 -5.390 -2.388 4.421 1.00 0.00 C ATOM 147 C ALA 37 -4.799 -0.970 4.600 1.00 0.00 C ATOM 148 O ALA 37 -4.421 -0.326 3.595 1.00 0.00 O ATOM 149 N GLN 38 -4.723 -0.470 5.841 1.00 0.00 N ATOM 150 CA GLN 38 -4.185 0.889 6.068 1.00 0.00 C ATOM 151 C GLN 38 -2.751 1.041 5.605 1.00 0.00 C ATOM 152 O GLN 38 -2.377 2.083 5.043 1.00 0.00 O ATOM 153 N ASN 39 -1.957 -0.000 5.836 1.00 0.00 N ATOM 154 CA ASN 39 -0.596 -0.040 5.303 1.00 0.00 C ATOM 155 C ASN 39 -0.496 0.023 3.775 1.00 0.00 C ATOM 156 O ASN 39 0.257 0.844 3.229 1.00 0.00 O ATOM 157 N GLU 40 -1.254 -0.834 3.093 1.00 0.00 N ATOM 158 CA GLU 40 -1.330 -0.816 1.614 1.00 0.00 C ATOM 159 C GLU 40 -1.834 0.533 1.097 1.00 0.00 C ATOM 160 O GLU 40 -1.298 1.118 0.129 1.00 0.00 O ATOM 161 N PHE 41 -2.884 1.023 1.731 1.00 0.00 N ATOM 162 CA PHE 41 -3.412 2.338 1.437 1.00 0.00 C ATOM 163 C PHE 41 -2.381 3.473 1.613 1.00 0.00 C ATOM 164 O PHE 41 -2.305 4.390 0.779 1.00 0.00 O ATOM 165 N SER 42 -1.611 3.428 2.704 1.00 0.00 N ATOM 166 CA SER 42 -0.600 4.456 2.984 1.00 0.00 C ATOM 167 C SER 42 0.486 4.485 1.930 1.00 0.00 C ATOM 168 O SER 42 0.863 5.553 1.456 1.00 0.00 O ATOM 169 N GLY 43 0.969 3.300 1.568 1.00 0.00 N ATOM 170 CA GLY 43 1.997 3.168 0.556 1.00 0.00 C ATOM 171 C GLY 43 1.431 3.521 -0.802 1.00 0.00 C ATOM 172 O GLY 43 2.130 4.149 -1.607 1.00 0.00 O ATOM 173 N TRP 44 0.178 3.125 -1.074 1.00 0.00 N ATOM 174 CA TRP 44 -0.443 3.498 -2.360 1.00 0.00 C ATOM 175 C TRP 44 -0.485 5.015 -2.516 1.00 0.00 C ATOM 176 O TRP 44 -0.121 5.590 -3.554 1.00 0.00 O ATOM 177 N GLU 45 -0.887 5.659 -1.434 1.00 0.00 N ATOM 178 CA GLU 45 -0.868 7.110 -1.343 1.00 0.00 C ATOM 179 C GLU 45 0.512 7.752 -1.424 1.00 0.00 C ATOM 180 O GLU 45 0.735 8.608 -2.262 1.00 0.00 O ATOM 181 N SER 46 1.430 7.330 -0.553 1.00 0.00 N ATOM 182 CA SER 46 2.694 8.028 -0.312 1.00 0.00 C ATOM 183 C SER 46 3.905 7.504 -1.108 1.00 0.00 C ATOM 184 O SER 46 4.865 8.241 -1.304 1.00 0.00 O ATOM 185 N LYS 47 3.890 6.218 -1.462 1.00 0.00 N ATOM 186 CA LYS 47 4.982 5.657 -2.246 1.00 0.00 C ATOM 187 C LYS 47 4.611 5.702 -3.720 1.00 0.00 C ATOM 188 O LYS 47 5.334 6.281 -4.523 1.00 0.00 O ATOM 189 N LEU 48 3.483 5.109 -4.069 1.00 0.00 N ATOM 190 CA LEU 48 3.002 5.119 -5.448 1.00 0.00 C ATOM 191 C LEU 48 2.358 6.452 -5.904 1.00 0.00 C ATOM 192 O LEU 48 2.374 6.770 -7.114 1.00 0.00 O ATOM 193 N GLY 49 1.823 7.247 -4.956 1.00 0.00 N ATOM 194 CA GLY 49 1.246 8.553 -5.305 1.00 0.00 C ATOM 195 C GLY 49 0.086 8.340 -6.286 1.00 0.00 C ATOM 196 O GLY 49 -0.009 9.033 -7.314 1.00 0.00 O ATOM 197 N ASN 50 -0.754 7.350 -5.979 1.00 0.00 N ATOM 198 CA ASN 50 -1.942 7.051 -6.807 1.00 0.00 C ATOM 199 C ASN 50 -2.959 8.196 -6.907 1.00 0.00 C ATOM 200 O ASN 50 -3.752 8.230 -7.832 1.00 0.00 O ATOM 201 N GLY 51 -2.884 9.135 -5.951 1.00 0.00 N ATOM 202 CA GLY 51 -3.760 10.297 -5.893 1.00 0.00 C ATOM 203 C GLY 51 -3.580 11.253 -7.065 1.00 0.00 C ATOM 204 O GLY 51 -4.463 12.046 -7.361 1.00 0.00 O ATOM 205 N GLU 52 -2.457 11.125 -7.770 1.00 0.00 N ATOM 206 CA GLU 52 -2.276 11.886 -8.980 1.00 0.00 C ATOM 207 C GLU 52 -3.287 11.449 -10.032 1.00 0.00 C ATOM 208 O GLU 52 -3.682 12.254 -10.879 1.00 0.00 O ATOM 209 N ILE 53 -3.719 10.183 -9.949 1.00 0.00 N ATOM 210 CA ILE 53 -4.455 9.509 -11.047 1.00 0.00 C ATOM 211 C ILE 53 -5.901 9.568 -10.777 1.00 0.00 C ATOM 212 O ILE 53 -6.686 9.749 -11.688 1.00 0.00 O ATOM 213 N THR 54 -6.230 9.380 -9.510 1.00 0.00 N ATOM 214 CA THR 54 -7.559 9.314 -9.036 1.00 0.00 C ATOM 215 C THR 54 -7.635 9.851 -7.635 1.00 0.00 C ATOM 216 O THR 54 -6.677 9.681 -6.794 1.00 0.00 O ATOM 217 N VAL 55 -8.496 6.937 -4.098 1.00 0.00 N ATOM 218 CA VAL 55 -7.422 5.989 -3.762 1.00 0.00 C ATOM 219 C VAL 55 -7.924 4.892 -2.832 1.00 0.00 C ATOM 220 O VAL 55 -7.576 3.713 -2.933 1.00 0.00 O ATOM 221 N LYS 56 -8.755 5.286 -1.902 1.00 0.00 N ATOM 222 CA LYS 56 -9.432 4.373 -0.988 1.00 0.00 C ATOM 223 CA LYS 56 -9.275 4.294 -0.983 1.00 0.00 C ATOM 224 C LYS 56 -9.982 3.149 -1.729 1.00 0.00 C ATOM 225 O LYS 56 -9.686 1.968 -1.446 1.00 0.00 O ATOM 226 N GLU 57 -10.853 3.485 -2.673 1.00 0.00 N ATOM 227 CA GLU 57 -11.670 2.554 -3.439 1.00 0.00 C ATOM 228 C GLU 57 -10.850 1.598 -4.296 1.00 0.00 C ATOM 229 O GLU 57 -11.043 0.379 -4.245 1.00 0.00 O ATOM 230 N PHE 58 -9.944 2.146 -5.107 1.00 0.00 N ATOM 231 CA PHE 58 -9.079 1.317 -5.901 1.00 0.00 C ATOM 232 C PHE 58 -8.192 0.422 -5.003 1.00 0.00 C ATOM 233 O PHE 58 -8.043 -0.787 -5.269 1.00 0.00 O ATOM 234 N ILE 59 -7.655 0.997 -3.917 1.00 0.00 N ATOM 235 CA ILE 59 -6.792 0.236 -3.009 1.00 0.00 C ATOM 236 C ILE 59 -7.535 -0.960 -2.451 1.00 0.00 C ATOM 237 O ILE 59 -6.967 -2.048 -2.415 1.00 0.00 O ATOM 238 N GLU 60 -8.805 -0.750 -2.062 1.00 0.00 N ATOM 239 CA GLU 60 -9.629 -1.804 -1.435 1.00 0.00 C ATOM 240 CA GLU 60 -9.662 -1.793 -1.454 1.00 0.00 C ATOM 241 C GLU 60 -9.895 -2.933 -2.416 1.00 0.00 C ATOM 242 O GLU 60 -9.762 -4.096 -2.071 1.00 0.00 O ATOM 243 N GLY 61 -10.277 -2.564 -3.633 1.00 0.00 N ATOM 244 CA GLY 61 -10.510 -3.503 -4.714 1.00 0.00 C ATOM 245 CA GLY 61 -10.511 -3.525 -4.700 1.00 0.00 C ATOM 246 C GLY 61 -9.271 -4.388 -4.962 1.00 0.00 C ATOM 247 O GLY 61 -9.350 -5.626 -4.955 1.00 0.00 O ATOM 248 N LEU 62 -8.129 -3.746 -5.170 1.00 0.00 N ATOM 249 CA LEU 62 -6.849 -4.438 -5.369 1.00 0.00 C ATOM 250 C LEU 62 -6.464 -5.338 -4.181 1.00 0.00 C ATOM 251 O LEU 62 -5.984 -6.485 -4.374 1.00 0.00 O ATOM 252 N GLY 63 -6.707 -4.829 -2.962 1.00 0.00 N ATOM 253 CA GLY 63 -6.412 -5.519 -1.739 1.00 0.00 C ATOM 254 C GLY 63 -7.244 -6.811 -1.725 1.00 0.00 C ATOM 255 O GLY 63 -6.691 -7.899 -1.586 1.00 0.00 O ATOM 256 N TYR 64 -8.553 -6.697 -1.917 1.00 0.00 N ATOM 257 CA TYR 64 -9.452 -7.857 -1.873 1.00 0.00 C ATOM 258 C TYR 64 -9.151 -8.931 -2.886 1.00 0.00 C ATOM 259 O TYR 64 -8.973 -10.110 -2.539 1.00 0.00 O ATOM 260 N SER 65 -9.085 -8.502 -4.140 1.00 0.00 N ATOM 261 CA SER 65 -8.791 -9.356 -5.280 1.00 0.00 C ATOM 262 C SER 65 -7.454 -10.102 -5.164 1.00 0.00 C ATOM 263 O SER 65 -7.409 -11.316 -5.366 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 254 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 66.85 63.3 120 96.8 124 ARMSMC SECONDARY STRUCTURE . . 42.36 80.2 81 98.8 82 ARMSMC SURFACE . . . . . . . . 71.64 59.1 88 97.8 90 ARMSMC BURIED . . . . . . . . 51.46 75.0 32 94.1 34 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 50 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 47 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 32 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 41 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 36 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 27 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 30 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 15 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 11 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 9 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 5 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.22 (Number of atoms: 68) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.22 68 107.9 63 CRMSCA CRN = ALL/NP . . . . . 0.1356 CRMSCA SECONDARY STRUCTURE . . 9.77 44 107.3 41 CRMSCA SURFACE . . . . . . . . 9.44 51 110.9 46 CRMSCA BURIED . . . . . . . . 8.53 17 100.0 17 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.33 254 82.2 309 CRMSMC SECONDARY STRUCTURE . . 9.81 167 83.1 201 CRMSMC SURFACE . . . . . . . . 9.51 189 83.6 226 CRMSMC BURIED . . . . . . . . 8.79 65 78.3 83 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 750 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 730 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 484 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 554 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 196 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.33 254 25.3 1002 CRMSALL SECONDARY STRUCTURE . . 9.81 167 25.8 648 CRMSALL SURFACE . . . . . . . . 9.51 189 25.6 738 CRMSALL BURIED . . . . . . . . 8.79 65 24.6 264 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.542 1.000 0.500 68 107.9 63 ERRCA SECONDARY STRUCTURE . . 9.228 1.000 0.500 44 107.3 41 ERRCA SURFACE . . . . . . . . 8.682 1.000 0.500 51 110.9 46 ERRCA BURIED . . . . . . . . 8.120 1.000 0.500 17 100.0 17 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.634 1.000 0.500 254 82.2 309 ERRMC SECONDARY STRUCTURE . . 9.235 1.000 0.500 167 83.1 201 ERRMC SURFACE . . . . . . . . 8.743 1.000 0.500 189 83.6 226 ERRMC BURIED . . . . . . . . 8.315 1.000 0.500 65 78.3 83 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 750 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 730 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 484 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 554 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 196 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.634 1.000 0.500 254 25.3 1002 ERRALL SECONDARY STRUCTURE . . 9.235 1.000 0.500 167 25.8 648 ERRALL SURFACE . . . . . . . . 8.743 1.000 0.500 189 25.6 738 ERRALL BURIED . . . . . . . . 8.315 1.000 0.500 65 24.6 264 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 1 8 46 62 63 DISTCA CA (P) 0.00 1.59 1.59 12.70 73.02 63 DISTCA CA (RMS) 0.00 1.54 1.54 4.02 7.09 DISTCA ALL (N) 0 3 5 32 175 248 1002 DISTALL ALL (P) 0.00 0.30 0.50 3.19 17.47 1002 DISTALL ALL (RMS) 0.00 1.44 2.13 3.96 6.94 DISTALL END of the results output