####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 68 ( 272), selected 68 , name T0552AL285_1-D1 # Molecule2: number of CA atoms 73 ( 1186), selected 68 , name T0552-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0552AL285_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 14 - 63 4.60 5.77 LCS_AVERAGE: 39.65 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 14 - 37 1.70 6.09 LCS_AVERAGE: 20.04 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 94 - 112 0.99 6.89 LCS_AVERAGE: 12.07 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 68 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 14 S 14 5 20 32 3 7 11 19 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT I 15 I 15 5 20 32 3 8 14 20 29 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT E 16 E 16 5 20 32 5 10 14 20 23 35 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT T 17 T 17 5 20 32 5 10 15 20 25 42 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT M 18 M 18 5 20 32 5 10 15 20 29 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT P 19 P 19 5 20 32 3 7 15 20 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT V 20 V 20 3 20 32 2 4 4 4 13 32 40 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT K 25 K 25 11 20 32 5 10 15 22 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT V 26 V 26 11 20 32 5 10 15 20 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT G 27 G 27 11 20 32 5 10 15 20 29 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT E 28 E 28 11 20 32 5 7 15 20 30 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT T 29 T 29 11 20 32 5 7 15 20 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT A 30 A 30 11 20 32 4 9 15 20 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT E 31 E 31 11 20 32 5 10 15 20 29 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT I 32 I 32 11 20 32 4 10 15 20 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT R 33 R 33 11 20 32 5 10 15 20 29 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT C 34 C 34 11 20 32 5 10 15 20 24 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Q 35 Q 35 11 20 32 5 8 15 20 29 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT L 36 L 36 8 20 32 3 8 14 20 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT H 37 H 37 8 20 32 0 7 14 20 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT F 48 F 48 6 14 32 5 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT I 49 I 49 6 12 32 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT R 50 R 50 6 12 32 4 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Y 51 Y 51 6 8 32 4 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT F 52 F 52 6 8 32 6 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Q 53 Q 53 6 8 32 4 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT G 58 G 58 4 6 32 3 4 5 6 6 6 8 10 13 20 31 37 44 50 56 61 64 64 64 64 LCS_GDT T 59 T 59 4 6 32 3 4 5 6 6 7 12 29 43 45 50 56 59 60 60 62 64 64 64 64 LCS_GDT L 60 L 60 4 6 32 3 4 5 13 16 16 24 36 43 45 52 57 59 60 60 62 64 64 64 64 LCS_GDT K 61 K 61 4 9 32 3 4 6 15 18 26 39 46 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT M 62 M 62 3 9 32 3 3 5 6 8 10 11 13 16 27 38 45 53 59 60 62 64 64 64 64 LCS_GDT S 63 S 63 3 9 32 3 3 6 7 9 10 10 12 13 15 20 21 25 26 32 37 51 54 58 62 LCS_GDT D 64 D 64 5 9 15 3 3 6 7 9 10 10 12 13 14 15 16 21 29 32 37 42 54 59 61 LCS_GDT G 65 G 65 5 9 15 3 5 6 7 9 10 10 12 13 18 27 39 48 56 60 62 64 64 64 64 LCS_GDT T 66 T 66 5 9 15 4 5 6 7 9 10 10 12 13 14 15 33 52 58 60 62 64 64 64 64 LCS_GDT V 67 V 67 5 9 15 4 5 6 14 21 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT L 68 L 68 5 9 15 4 9 10 23 27 40 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT L 69 L 69 5 9 15 4 5 7 9 17 19 22 25 26 29 32 37 44 51 53 57 59 61 61 62 LCS_GDT D 72 D 72 0 0 13 0 0 0 0 0 0 0 8 12 12 14 16 17 18 19 24 26 27 29 30 LCS_GDT P 77 P 77 3 4 29 0 12 19 23 25 32 42 49 50 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT G 78 G 78 3 5 29 0 3 4 13 19 41 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT E 79 E 79 8 8 29 1 4 8 8 21 31 45 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT T 80 T 80 8 8 29 3 7 8 8 13 22 27 33 44 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT F 81 F 81 8 8 29 3 7 8 8 17 25 29 43 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT R 82 R 82 8 8 29 5 7 8 8 13 20 27 33 48 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT L 83 L 83 8 8 29 5 7 9 13 19 26 42 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Y 84 Y 84 8 8 29 5 7 9 13 19 26 41 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Y 85 Y 85 8 8 29 5 7 8 9 11 19 22 29 33 48 55 57 59 60 60 62 64 64 64 64 LCS_GDT T 86 T 86 8 8 29 5 7 8 9 18 23 28 38 50 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT S 87 S 87 4 19 29 4 7 14 20 25 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT A 88 A 88 5 19 29 4 6 15 20 30 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Q 93 Q 93 6 19 29 4 9 12 22 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT T 94 T 94 16 19 29 4 12 19 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT V 95 V 95 16 19 29 4 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT D 96 D 96 16 19 29 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT V 97 V 97 16 19 29 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Y 98 Y 98 16 19 29 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT F 99 F 99 16 19 29 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Q 100 Q 100 16 19 29 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT D 101 D 101 16 19 29 6 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Q 105 Q 105 16 19 29 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT L 106 L 106 16 19 29 4 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Q 107 Q 107 16 19 29 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT Q 108 Q 108 16 19 29 5 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT L 109 L 109 16 19 29 5 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT T 110 T 110 16 19 29 4 14 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT F 111 F 111 16 19 29 4 13 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_GDT S 112 S 112 16 19 29 3 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 LCS_AVERAGE LCS_A: 23.92 ( 12.07 20.04 39.65 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 16 21 23 31 43 46 49 52 54 55 57 59 60 60 62 64 64 64 64 GDT PERCENT_AT 9.59 21.92 28.77 31.51 42.47 58.90 63.01 67.12 71.23 73.97 75.34 78.08 80.82 82.19 82.19 84.93 87.67 87.67 87.67 87.67 GDT RMS_LOCAL 0.34 0.62 0.89 1.05 1.89 2.30 2.41 2.56 2.81 2.91 2.98 3.17 3.42 3.49 3.49 3.81 4.18 4.18 4.18 4.18 GDT RMS_ALL_AT 8.37 8.11 7.47 7.62 6.03 5.76 5.79 5.85 5.65 5.72 5.69 5.65 5.63 5.63 5.63 5.60 5.58 5.58 5.58 5.58 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA S 14 S 14 1.960 2 0.031 0.031 3.340 63.095 42.063 LGA I 15 I 15 2.436 4 0.119 0.119 2.660 64.881 32.440 LGA E 16 E 16 3.885 5 0.064 0.064 3.885 45.000 20.000 LGA T 17 T 17 3.384 3 0.013 0.013 3.614 48.333 27.619 LGA M 18 M 18 2.720 4 0.051 0.051 3.321 53.571 26.786 LGA P 19 P 19 2.386 3 0.233 0.233 4.031 54.524 31.156 LGA V 20 V 20 3.895 3 0.582 0.582 3.983 50.714 28.980 LGA K 25 K 25 1.830 5 0.050 0.050 2.324 70.833 31.481 LGA V 26 V 26 1.977 3 0.100 0.100 2.216 68.810 39.320 LGA G 27 G 27 2.882 0 0.016 0.016 3.258 55.357 55.357 LGA E 28 E 28 2.670 5 0.037 0.037 2.670 57.143 25.397 LGA T 29 T 29 2.710 3 0.165 0.165 2.732 57.143 32.653 LGA A 30 A 30 2.739 1 0.039 0.039 3.043 55.357 44.286 LGA E 31 E 31 3.236 5 0.172 0.172 3.236 55.357 24.603 LGA I 32 I 32 2.172 4 0.100 0.100 2.855 60.952 30.476 LGA R 33 R 33 2.757 7 0.051 0.051 2.814 59.048 21.472 LGA C 34 C 34 3.268 2 0.177 0.177 3.800 48.333 32.222 LGA Q 35 Q 35 2.802 5 0.181 0.181 3.629 53.690 23.862 LGA L 36 L 36 1.629 4 0.207 0.207 1.830 72.857 36.429 LGA H 37 H 37 1.930 6 0.109 0.109 2.103 70.833 28.333 LGA F 48 F 48 2.389 7 0.164 0.164 2.901 60.952 22.165 LGA I 49 I 49 2.377 4 0.064 0.064 2.406 64.762 32.381 LGA R 50 R 50 2.310 7 0.064 0.064 2.867 62.857 22.857 LGA Y 51 Y 51 2.303 8 0.067 0.067 2.303 66.786 22.262 LGA F 52 F 52 2.377 7 0.090 0.090 2.436 64.762 23.550 LGA Q 53 Q 53 1.751 5 0.203 0.203 3.450 63.095 28.042 LGA G 58 G 58 11.360 0 0.063 0.063 11.626 0.833 0.833 LGA T 59 T 59 8.475 3 0.141 0.141 9.723 2.619 1.497 LGA L 60 L 60 8.095 4 0.179 0.179 8.095 14.881 7.440 LGA K 61 K 61 6.199 5 0.655 0.655 8.200 9.762 4.339 LGA M 62 M 62 11.010 4 0.416 0.416 13.685 0.714 0.357 LGA S 63 S 63 16.565 2 0.151 0.151 18.075 0.000 0.000 LGA D 64 D 64 16.676 4 0.686 0.686 16.676 0.000 0.000 LGA G 65 G 65 12.014 0 0.098 0.098 13.761 0.357 0.357 LGA T 66 T 66 10.020 3 0.083 0.083 11.048 5.833 3.333 LGA V 67 V 67 3.205 3 0.026 0.026 6.185 32.976 18.844 LGA L 68 L 68 3.399 4 0.161 0.161 6.054 38.333 19.167 LGA L 69 L 69 10.035 4 0.047 0.047 11.171 1.786 0.893 LGA D 72 D 72 19.497 4 0.027 0.027 19.497 0.000 0.000 LGA P 77 P 77 4.529 3 0.143 0.143 5.115 37.738 21.565 LGA G 78 G 78 3.166 0 0.666 0.666 3.166 53.571 53.571 LGA E 79 E 79 4.507 5 0.645 0.645 5.614 30.595 13.598 LGA T 80 T 80 7.488 3 0.155 0.155 7.931 11.071 6.327 LGA F 81 F 81 6.051 7 0.063 0.063 7.538 13.690 4.978 LGA R 82 R 82 7.154 7 0.216 0.216 7.154 13.452 4.892 LGA L 83 L 83 5.314 4 0.043 0.043 6.922 20.595 10.298 LGA Y 84 Y 84 5.795 8 0.045 0.045 5.795 25.000 8.333 LGA Y 85 Y 85 6.714 8 0.427 0.427 6.714 17.262 5.754 LGA T 86 T 86 5.761 3 0.076 0.076 6.206 26.786 15.306 LGA S 87 S 87 3.102 2 0.085 0.085 4.110 50.357 33.571 LGA A 88 A 88 2.748 1 0.600 0.600 3.711 55.595 44.476 LGA Q 93 Q 93 1.889 5 0.266 0.266 1.889 75.000 33.333 LGA T 94 T 94 2.710 3 0.100 0.100 3.266 55.357 31.633 LGA V 95 V 95 1.530 3 0.217 0.217 1.759 75.000 42.857 LGA D 96 D 96 2.434 4 0.182 0.182 3.436 59.167 29.583 LGA V 97 V 97 2.449 3 0.118 0.118 2.449 64.762 37.007 LGA Y 98 Y 98 1.586 8 0.019 0.019 1.827 77.143 25.714 LGA F 99 F 99 1.635 7 0.185 0.185 1.635 77.143 28.052 LGA Q 100 Q 100 1.594 5 0.080 0.080 2.027 70.833 31.481 LGA D 101 D 101 2.510 4 0.075 0.075 2.510 64.881 32.440 LGA Q 105 Q 105 2.077 5 0.123 0.123 2.288 68.810 30.582 LGA L 106 L 106 1.195 4 0.025 0.025 1.383 81.429 40.714 LGA Q 107 Q 107 1.560 5 0.291 0.291 1.966 77.143 34.286 LGA Q 108 Q 108 1.860 5 0.145 0.145 2.636 66.905 29.735 LGA L 109 L 109 1.653 4 0.262 0.262 1.674 72.857 36.429 LGA T 110 T 110 2.780 3 0.193 0.193 3.863 53.690 30.680 LGA F 111 F 111 2.312 7 0.019 0.019 2.317 64.762 23.550 LGA S 112 S 112 2.313 2 0.066 0.066 2.370 64.762 43.175 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 68 272 272 100.00 552 272 49.28 73 SUMMARY(RMSD_GDC): 5.566 5.422 5.422 43.596 22.290 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 68 73 4.0 49 2.56 51.370 47.273 1.840 LGA_LOCAL RMSD: 2.564 Number of atoms: 49 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.854 Number of assigned atoms: 68 Std_ASGN_ATOMS RMSD: 5.566 Standard rmsd on all 68 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.204645 * X + 0.312088 * Y + -0.927751 * Z + 1.054340 Y_new = 0.415351 * X + -0.885936 * Y + -0.206402 * Z + -0.300446 Z_new = -0.886343 * X + -0.343103 * Y + -0.310928 * Z + -0.853060 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.113002 1.089387 -2.307040 [DEG: 63.7703 62.4173 -132.1836 ] ZXZ: -1.351885 1.886966 -1.940132 [DEG: -77.4573 108.1152 -111.1614 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0552AL285_1-D1 REMARK 2: T0552-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0552AL285_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 68 73 4.0 49 2.56 47.273 5.57 REMARK ---------------------------------------------------------- MOLECULE T0552AL285_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 2ncmA ATOM 5 N SER 14 -5.108 -9.420 8.503 1.00 0.00 N ATOM 6 CA SER 14 -5.586 -9.570 7.130 1.00 0.00 C ATOM 7 C SER 14 -5.173 -8.353 6.302 1.00 0.00 C ATOM 8 O SER 14 -5.196 -7.228 6.808 1.00 0.00 O ATOM 9 N ILE 15 -4.796 -8.581 5.039 1.00 0.00 N ATOM 10 CA ILE 15 -4.373 -7.494 4.146 1.00 0.00 C ATOM 11 C ILE 15 -4.717 -7.819 2.691 1.00 0.00 C ATOM 12 O ILE 15 -4.610 -8.973 2.270 1.00 0.00 O ATOM 13 N GLU 16 -5.111 -6.792 1.926 1.00 0.00 N ATOM 14 CA GLU 16 -5.450 -6.966 0.512 1.00 0.00 C ATOM 15 C GLU 16 -5.385 -5.632 -0.228 1.00 0.00 C ATOM 16 O GLU 16 -6.002 -4.656 0.193 1.00 0.00 O ATOM 17 N THR 17 -4.630 -5.599 -1.330 1.00 0.00 N ATOM 18 CA THR 17 -4.478 -4.381 -2.135 1.00 0.00 C ATOM 19 C THR 17 -5.396 -4.431 -3.356 1.00 0.00 C ATOM 20 O THR 17 -5.537 -5.477 -3.991 1.00 0.00 O ATOM 21 N MET 18 -6.028 -3.291 -3.670 1.00 0.00 N ATOM 22 CA MET 18 -6.948 -3.198 -4.805 1.00 0.00 C ATOM 23 C MET 18 -6.576 -2.004 -5.712 1.00 0.00 C ATOM 24 O MET 18 -6.306 -0.913 -5.203 1.00 0.00 O ATOM 25 N PRO 19 -6.559 -2.170 -7.068 1.00 0.00 N ATOM 26 CA PRO 19 -6.866 -3.435 -7.764 1.00 0.00 C ATOM 27 C PRO 19 -5.699 -4.418 -7.696 1.00 0.00 C ATOM 28 O PRO 19 -4.600 -4.050 -7.275 1.00 0.00 O ATOM 29 N VAL 20 -5.939 -5.666 -8.118 1.00 0.00 N ATOM 30 CA VAL 20 -4.895 -6.699 -8.109 1.00 0.00 C ATOM 31 C VAL 20 -3.797 -6.353 -9.113 1.00 0.00 C ATOM 32 O VAL 20 -2.608 -6.435 -8.802 1.00 0.00 O ATOM 49 N LYS 25 -0.319 4.530 -17.502 1.00 0.00 N ATOM 50 CA LYS 25 0.515 5.152 -18.525 1.00 0.00 C ATOM 51 C LYS 25 1.331 6.267 -17.871 1.00 0.00 C ATOM 52 O LYS 25 0.935 6.799 -16.826 1.00 0.00 O ATOM 53 N VAL 26 2.463 6.624 -18.484 1.00 0.00 N ATOM 54 CA VAL 26 3.328 7.682 -17.949 1.00 0.00 C ATOM 55 C VAL 26 2.582 9.023 -17.943 1.00 0.00 C ATOM 56 O VAL 26 1.851 9.338 -18.886 1.00 0.00 O ATOM 57 N GLY 27 2.745 9.777 -16.852 1.00 0.00 N ATOM 58 CA GLY 27 2.050 11.046 -16.705 1.00 0.00 C ATOM 59 C GLY 27 0.703 10.900 -15.992 1.00 0.00 C ATOM 60 O GLY 27 0.082 11.905 -15.641 1.00 0.00 O ATOM 61 N GLU 28 0.256 9.647 -15.765 1.00 0.00 N ATOM 62 CA GLU 28 -1.008 9.383 -15.082 1.00 0.00 C ATOM 63 C GLU 28 -0.743 9.031 -13.629 1.00 0.00 C ATOM 64 O GLU 28 0.337 8.538 -13.296 1.00 0.00 O ATOM 65 N THR 29 -1.737 9.262 -12.768 1.00 0.00 N ATOM 66 CA THR 29 -1.607 8.942 -11.349 1.00 0.00 C ATOM 67 C THR 29 -2.278 7.600 -11.056 1.00 0.00 C ATOM 68 O THR 29 -3.041 7.097 -11.884 1.00 0.00 O ATOM 69 N ALA 30 -1.964 7.003 -9.901 1.00 0.00 N ATOM 70 CA ALA 30 -2.518 5.692 -9.537 1.00 0.00 C ATOM 71 C ALA 30 -2.342 5.393 -8.052 1.00 0.00 C ATOM 72 O ALA 30 -1.217 5.306 -7.559 1.00 0.00 O ATOM 73 N GLU 31 -3.466 5.200 -7.350 1.00 0.00 N ATOM 74 CA GLU 31 -3.443 4.873 -5.921 1.00 0.00 C ATOM 75 C GLU 31 -3.955 3.456 -5.687 1.00 0.00 C ATOM 76 O GLU 31 -4.895 3.014 -6.352 1.00 0.00 O ATOM 77 N ILE 32 -3.325 2.743 -4.746 1.00 0.00 N ATOM 78 CA ILE 32 -3.715 1.357 -4.431 1.00 0.00 C ATOM 79 C ILE 32 -4.195 1.233 -2.991 1.00 0.00 C ATOM 80 O ILE 32 -3.458 1.525 -2.056 1.00 0.00 O ATOM 81 N ARG 33 -5.457 0.833 -2.828 1.00 0.00 N ATOM 82 CA ARG 33 -6.068 0.726 -1.502 1.00 0.00 C ATOM 83 C ARG 33 -5.673 -0.540 -0.739 1.00 0.00 C ATOM 84 O ARG 33 -6.034 -1.648 -1.128 1.00 0.00 O ATOM 85 N CYS 34 -4.960 -0.355 0.384 1.00 0.00 N ATOM 86 CA CYS 34 -4.543 -1.475 1.236 1.00 0.00 C ATOM 87 C CYS 34 -5.481 -1.610 2.432 1.00 0.00 C ATOM 88 O CYS 34 -5.297 -0.942 3.455 1.00 0.00 O ATOM 89 N GLN 35 -6.484 -2.480 2.293 1.00 0.00 N ATOM 90 CA GLN 35 -7.455 -2.721 3.354 1.00 0.00 C ATOM 91 C GLN 35 -6.953 -3.829 4.269 1.00 0.00 C ATOM 92 O GLN 35 -6.097 -4.623 3.868 1.00 0.00 O ATOM 93 N LEU 36 -7.474 -3.881 5.501 1.00 0.00 N ATOM 94 CA LEU 36 -7.052 -4.897 6.464 1.00 0.00 C ATOM 95 C LEU 36 -8.226 -5.477 7.258 1.00 0.00 C ATOM 96 O LEU 36 -9.350 -4.977 7.178 1.00 0.00 O ATOM 97 N HIS 37 -7.939 -6.528 8.032 1.00 0.00 N ATOM 98 CA HIS 37 -8.948 -7.181 8.861 1.00 0.00 C ATOM 99 C HIS 37 -8.284 -7.964 9.995 1.00 0.00 C ATOM 100 O HIS 37 -7.272 -8.632 9.777 1.00 0.00 O ATOM 125 N PHE 48 0.523 -1.990 12.446 1.00 0.00 N ATOM 126 CA PHE 48 1.205 -0.952 11.677 1.00 0.00 C ATOM 127 C PHE 48 1.143 -1.295 10.192 1.00 0.00 C ATOM 128 O PHE 48 0.830 -2.431 9.840 1.00 0.00 O ATOM 129 N ILE 49 1.439 -0.312 9.331 1.00 0.00 N ATOM 130 CA ILE 49 1.413 -0.506 7.876 1.00 0.00 C ATOM 131 C ILE 49 2.737 -0.045 7.241 1.00 0.00 C ATOM 132 O ILE 49 3.361 0.909 7.708 1.00 0.00 O ATOM 133 N ARG 50 3.139 -0.733 6.165 1.00 0.00 N ATOM 134 CA ARG 50 4.368 -0.410 5.442 1.00 0.00 C ATOM 135 C ARG 50 4.180 -0.647 3.943 1.00 0.00 C ATOM 136 O ARG 50 3.292 -1.402 3.542 1.00 0.00 O ATOM 137 N TYR 51 5.021 -0.008 3.120 1.00 0.00 N ATOM 138 CA TYR 51 4.952 -0.157 1.660 1.00 0.00 C ATOM 139 C TYR 51 6.346 -0.390 1.081 1.00 0.00 C ATOM 140 O TYR 51 7.279 0.373 1.366 1.00 0.00 O ATOM 141 N PHE 52 6.491 -1.454 0.272 1.00 0.00 N ATOM 142 CA PHE 52 7.789 -1.794 -0.328 1.00 0.00 C ATOM 143 C PHE 52 7.781 -1.710 -1.847 1.00 0.00 C ATOM 144 O PHE 52 7.062 -2.444 -2.524 1.00 0.00 O ATOM 145 N GLN 53 8.619 -0.808 -2.373 1.00 0.00 N ATOM 146 CA GLN 53 8.750 -0.610 -3.809 1.00 0.00 C ATOM 147 C GLN 53 9.363 -1.852 -4.468 1.00 0.00 C ATOM 148 O GLN 53 10.159 -2.558 -3.819 1.00 0.00 O ATOM 165 N GLY 58 11.551 -0.454 1.024 1.00 0.00 N ATOM 166 CA GLY 58 10.478 0.450 1.467 1.00 0.00 C ATOM 167 C GLY 58 10.620 1.856 0.886 1.00 0.00 C ATOM 168 O GLY 58 11.733 2.366 0.739 1.00 0.00 O ATOM 169 N THR 59 9.478 2.477 0.564 1.00 0.00 N ATOM 170 CA THR 59 9.461 3.832 0.004 1.00 0.00 C ATOM 171 C THR 59 8.909 4.825 1.021 1.00 0.00 C ATOM 172 O THR 59 8.001 4.495 1.789 1.00 0.00 O ATOM 173 N LEU 60 9.470 6.039 1.030 1.00 0.00 N ATOM 174 CA LEU 60 9.041 7.078 1.961 1.00 0.00 C ATOM 175 C LEU 60 7.822 7.834 1.425 1.00 0.00 C ATOM 176 O LEU 60 7.588 7.849 0.214 1.00 0.00 O ATOM 177 N LYS 61 7.021 8.478 2.315 1.00 0.00 N ATOM 178 CA LYS 61 5.832 9.230 1.904 1.00 0.00 C ATOM 179 C LYS 61 6.171 10.621 1.360 1.00 0.00 C ATOM 180 O LYS 61 5.434 11.159 0.530 1.00 0.00 O ATOM 181 N MET 62 7.292 11.196 1.820 1.00 0.00 N ATOM 182 CA MET 62 7.733 12.519 1.370 1.00 0.00 C ATOM 183 C MET 62 9.100 12.411 0.681 1.00 0.00 C ATOM 184 O MET 62 10.109 12.931 1.168 1.00 0.00 O ATOM 185 N SER 63 9.120 11.721 -0.468 1.00 0.00 N ATOM 186 CA SER 63 10.353 11.525 -1.245 1.00 0.00 C ATOM 187 C SER 63 10.180 11.976 -2.697 1.00 0.00 C ATOM 188 O SER 63 10.906 12.857 -3.164 1.00 0.00 O ATOM 189 N ASP 64 9.230 11.361 -3.410 1.00 0.00 N ATOM 190 CA ASP 64 8.975 11.693 -4.817 1.00 0.00 C ATOM 191 C ASP 64 7.463 11.680 -5.109 1.00 0.00 C ATOM 192 O ASP 64 6.652 11.743 -4.185 1.00 0.00 O ATOM 193 N GLY 65 7.089 11.599 -6.398 1.00 0.00 N ATOM 194 CA GLY 65 5.679 11.578 -6.827 1.00 0.00 C ATOM 195 C GLY 65 4.840 10.515 -6.096 1.00 0.00 C ATOM 196 O GLY 65 3.612 10.645 -6.016 1.00 0.00 O ATOM 197 N THR 66 5.499 9.475 -5.567 1.00 0.00 N ATOM 198 CA THR 66 4.806 8.412 -4.839 1.00 0.00 C ATOM 199 C THR 66 4.551 8.841 -3.389 1.00 0.00 C ATOM 200 O THR 66 5.443 8.758 -2.542 1.00 0.00 O ATOM 201 N VAL 67 3.323 9.299 -3.118 1.00 0.00 N ATOM 202 CA VAL 67 2.931 9.745 -1.780 1.00 0.00 C ATOM 203 C VAL 67 2.034 8.709 -1.099 1.00 0.00 C ATOM 204 O VAL 67 0.982 8.351 -1.629 1.00 0.00 O ATOM 205 N LEU 68 2.456 8.238 0.079 1.00 0.00 N ATOM 206 CA LEU 68 1.691 7.244 0.843 1.00 0.00 C ATOM 207 C LEU 68 0.771 7.943 1.843 1.00 0.00 C ATOM 208 O LEU 68 1.020 9.094 2.214 1.00 0.00 O ATOM 209 N LEU 69 -0.291 7.249 2.282 1.00 0.00 N ATOM 210 CA LEU 69 -1.233 7.826 3.243 1.00 0.00 C ATOM 211 C LEU 69 -1.900 6.749 4.110 1.00 0.00 C ATOM 212 O LEU 69 -2.141 5.632 3.656 1.00 0.00 O ATOM 221 N ASP 72 -8.006 4.890 7.462 1.00 0.00 N ATOM 222 CA ASP 72 -8.766 4.035 8.392 1.00 0.00 C ATOM 223 C ASP 72 -7.901 3.536 9.557 1.00 0.00 C ATOM 224 O ASP 72 -6.736 3.915 9.680 1.00 0.00 O ATOM 225 N PRO 77 -8.490 2.688 10.419 1.00 0.00 N ATOM 226 CA PRO 77 -7.788 2.135 11.591 1.00 0.00 C ATOM 227 C PRO 77 -6.440 1.515 11.216 1.00 0.00 C ATOM 228 O PRO 77 -5.466 1.640 11.962 1.00 0.00 O ATOM 229 N GLY 78 -6.394 0.854 10.054 1.00 0.00 N ATOM 230 CA GLY 78 -5.164 0.222 9.580 1.00 0.00 C ATOM 231 C GLY 78 -5.108 0.120 8.045 1.00 0.00 C ATOM 232 O GLY 78 -4.367 -0.708 7.507 1.00 0.00 O ATOM 233 N GLU 79 -5.868 0.976 7.342 1.00 0.00 N ATOM 234 CA GLU 79 -5.874 0.991 5.875 1.00 0.00 C ATOM 235 C GLU 79 -4.976 2.121 5.368 1.00 0.00 C ATOM 236 O GLU 79 -4.971 3.219 5.939 1.00 0.00 O ATOM 237 N THR 80 -4.203 1.846 4.311 1.00 0.00 N ATOM 238 CA THR 80 -3.282 2.838 3.752 1.00 0.00 C ATOM 239 C THR 80 -3.218 2.733 2.236 1.00 0.00 C ATOM 240 O THR 80 -3.109 1.633 1.691 1.00 0.00 O ATOM 241 N PHE 81 -3.285 3.885 1.557 1.00 0.00 N ATOM 242 CA PHE 81 -3.239 3.925 0.099 1.00 0.00 C ATOM 243 C PHE 81 -1.866 4.371 -0.410 1.00 0.00 C ATOM 244 O PHE 81 -1.239 5.268 0.161 1.00 0.00 O ATOM 245 N ARG 82 -1.418 3.737 -1.499 1.00 0.00 N ATOM 246 CA ARG 82 -0.140 4.040 -2.129 1.00 0.00 C ATOM 247 C ARG 82 -0.381 4.857 -3.389 1.00 0.00 C ATOM 248 O ARG 82 -0.641 4.290 -4.455 1.00 0.00 O ATOM 249 N LEU 83 -0.312 6.183 -3.259 1.00 0.00 N ATOM 250 CA LEU 83 -0.539 7.080 -4.392 1.00 0.00 C ATOM 251 C LEU 83 0.758 7.284 -5.178 1.00 0.00 C ATOM 252 O LEU 83 1.834 7.420 -4.595 1.00 0.00 O ATOM 253 N TYR 84 0.634 7.303 -6.505 1.00 0.00 N ATOM 254 CA TYR 84 1.772 7.490 -7.403 1.00 0.00 C ATOM 255 C TYR 84 1.363 8.449 -8.514 1.00 0.00 C ATOM 256 O TYR 84 0.786 8.026 -9.510 1.00 0.00 O ATOM 257 N TYR 85 1.635 9.747 -8.311 1.00 0.00 N ATOM 258 CA TYR 85 1.261 10.787 -9.283 1.00 0.00 C ATOM 259 C TYR 85 1.933 10.545 -10.661 1.00 0.00 C ATOM 260 O TYR 85 1.611 9.554 -11.314 1.00 0.00 O ATOM 261 N THR 86 2.854 11.419 -11.122 1.00 0.00 N ATOM 262 CA THR 86 3.526 11.230 -12.422 1.00 0.00 C ATOM 263 C THR 86 4.202 9.853 -12.496 1.00 0.00 C ATOM 264 O THR 86 5.328 9.678 -12.030 1.00 0.00 O ATOM 265 N SER 87 3.482 8.877 -13.056 1.00 0.00 N ATOM 266 CA SER 87 3.976 7.505 -13.168 1.00 0.00 C ATOM 267 C SER 87 5.116 7.384 -14.174 1.00 0.00 C ATOM 268 O SER 87 5.159 8.117 -15.161 1.00 0.00 O ATOM 269 N ALA 88 6.028 6.439 -13.918 1.00 0.00 N ATOM 270 CA ALA 88 7.166 6.192 -14.800 1.00 0.00 C ATOM 271 C ALA 88 7.456 4.690 -14.903 1.00 0.00 C ATOM 272 O ALA 88 7.137 3.910 -13.993 1.00 0.00 O ATOM 289 N GLN 93 5.983 -1.881 -11.133 1.00 0.00 N ATOM 290 CA GLN 93 6.475 -3.100 -10.509 1.00 0.00 C ATOM 291 C GLN 93 5.520 -3.640 -9.459 1.00 0.00 C ATOM 292 O GLN 93 4.458 -3.057 -9.231 1.00 0.00 O ATOM 293 N THR 94 5.898 -4.753 -8.822 1.00 0.00 N ATOM 294 CA THR 94 5.064 -5.371 -7.791 1.00 0.00 C ATOM 295 C THR 94 5.260 -4.679 -6.439 1.00 0.00 C ATOM 296 O THR 94 6.171 -5.030 -5.683 1.00 0.00 O ATOM 297 N VAL 95 4.381 -3.718 -6.126 1.00 0.00 N ATOM 298 CA VAL 95 4.445 -3.010 -4.847 1.00 0.00 C ATOM 299 C VAL 95 4.002 -3.951 -3.731 1.00 0.00 C ATOM 300 O VAL 95 3.333 -4.954 -4.000 1.00 0.00 O ATOM 301 N ASP 96 4.372 -3.638 -2.487 1.00 0.00 N ATOM 302 CA ASP 96 4.007 -4.477 -1.343 1.00 0.00 C ATOM 303 C ASP 96 3.349 -3.663 -0.241 1.00 0.00 C ATOM 304 O ASP 96 3.556 -2.456 -0.137 1.00 0.00 O ATOM 305 N VAL 97 2.594 -4.360 0.604 1.00 0.00 N ATOM 306 CA VAL 97 1.916 -3.758 1.743 1.00 0.00 C ATOM 307 C VAL 97 2.048 -4.700 2.927 1.00 0.00 C ATOM 308 O VAL 97 1.336 -5.706 3.002 1.00 0.00 O ATOM 309 N TYR 98 2.997 -4.404 3.824 1.00 0.00 N ATOM 310 CA TYR 98 3.257 -5.261 4.985 1.00 0.00 C ATOM 311 C TYR 98 2.820 -4.607 6.290 1.00 0.00 C ATOM 312 O TYR 98 3.238 -3.493 6.616 1.00 0.00 O ATOM 313 N PHE 99 1.993 -5.337 7.047 1.00 0.00 N ATOM 314 CA PHE 99 1.505 -4.885 8.341 1.00 0.00 C ATOM 315 C PHE 99 2.293 -5.615 9.435 1.00 0.00 C ATOM 316 O PHE 99 2.806 -6.704 9.189 1.00 0.00 O ATOM 317 N GLN 100 2.386 -5.019 10.634 1.00 0.00 N ATOM 318 CA GLN 100 3.125 -5.648 11.747 1.00 0.00 C ATOM 319 C GLN 100 2.330 -5.629 13.052 1.00 0.00 C ATOM 320 O GLN 100 1.622 -4.670 13.341 1.00 0.00 O ATOM 321 N ASP 101 2.460 -6.702 13.840 1.00 0.00 N ATOM 322 CA ASP 101 1.757 -6.814 15.118 1.00 0.00 C ATOM 323 C ASP 101 2.579 -6.220 16.260 1.00 0.00 C ATOM 324 O ASP 101 3.715 -5.787 16.055 1.00 0.00 O ATOM 337 N GLN 105 4.280 -10.455 14.814 1.00 0.00 N ATOM 338 CA GLN 105 3.534 -11.121 13.733 1.00 0.00 C ATOM 339 C GLN 105 3.114 -10.111 12.663 1.00 0.00 C ATOM 340 O GLN 105 2.169 -9.344 12.860 1.00 0.00 O ATOM 341 N LEU 106 3.829 -10.119 11.537 1.00 0.00 N ATOM 342 CA LEU 106 3.551 -9.201 10.432 1.00 0.00 C ATOM 343 C LEU 106 2.955 -9.926 9.230 1.00 0.00 C ATOM 344 O LEU 106 3.472 -10.954 8.788 1.00 0.00 O ATOM 345 N GLN 107 1.876 -9.355 8.692 1.00 0.00 N ATOM 346 CA GLN 107 1.200 -9.902 7.517 1.00 0.00 C ATOM 347 C GLN 107 1.649 -9.119 6.280 1.00 0.00 C ATOM 348 O GLN 107 2.513 -8.244 6.397 1.00 0.00 O ATOM 349 N GLN 108 1.093 -9.424 5.098 1.00 0.00 N ATOM 350 CA GLN 108 1.504 -8.700 3.889 1.00 0.00 C ATOM 351 C GLN 108 0.512 -8.808 2.722 1.00 0.00 C ATOM 352 O GLN 108 -0.482 -9.531 2.786 1.00 0.00 O ATOM 353 N LEU 109 0.832 -8.075 1.649 1.00 0.00 N ATOM 354 CA LEU 109 0.026 -8.054 0.428 1.00 0.00 C ATOM 355 C LEU 109 0.870 -7.559 -0.753 1.00 0.00 C ATOM 356 O LEU 109 2.034 -7.191 -0.568 1.00 0.00 O ATOM 357 N THR 110 0.293 -7.553 -1.961 1.00 0.00 N ATOM 358 CA THR 110 1.024 -7.102 -3.153 1.00 0.00 C ATOM 359 C THR 110 0.081 -6.603 -4.250 1.00 0.00 C ATOM 360 O THR 110 -1.118 -6.886 -4.230 1.00 0.00 O ATOM 361 N PHE 111 0.651 -5.871 -5.218 1.00 0.00 N ATOM 362 CA PHE 111 -0.113 -5.341 -6.345 1.00 0.00 C ATOM 363 C PHE 111 0.786 -5.162 -7.578 1.00 0.00 C ATOM 364 O PHE 111 1.796 -4.455 -7.520 1.00 0.00 O ATOM 365 N SER 112 0.403 -5.805 -8.687 1.00 0.00 N ATOM 366 CA SER 112 1.161 -5.715 -9.932 1.00 0.00 C ATOM 367 C SER 112 0.811 -4.413 -10.667 1.00 0.00 C ATOM 368 O SER 112 -0.182 -4.346 -11.395 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 272 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 49.54 53.5 86 61.0 141 ARMSMC SECONDARY STRUCTURE . . 51.32 43.8 48 62.3 77 ARMSMC SURFACE . . . . . . . . 50.09 53.2 62 60.2 103 ARMSMC BURIED . . . . . . . . 48.08 54.2 24 63.2 38 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 62 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 58 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 36 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 44 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 31 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 24 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 26 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 9 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 10 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 12 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 0 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.57 (Number of atoms: 68) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.57 68 93.2 73 CRMSCA CRN = ALL/NP . . . . . 0.0818 CRMSCA SECONDARY STRUCTURE . . 3.83 39 100.0 39 CRMSCA SURFACE . . . . . . . . 6.00 49 92.5 53 CRMSCA BURIED . . . . . . . . 4.24 19 95.0 20 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.42 272 75.3 361 CRMSMC SECONDARY STRUCTURE . . 3.88 156 80.0 195 CRMSMC SURFACE . . . . . . . . 5.81 196 74.8 262 CRMSMC BURIED . . . . . . . . 4.26 76 76.8 99 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 894 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 848 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 538 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 630 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 264 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.42 272 22.9 1186 CRMSALL SECONDARY STRUCTURE . . 3.88 156 22.5 694 CRMSALL SURFACE . . . . . . . . 5.81 196 23.3 842 CRMSALL BURIED . . . . . . . . 4.26 76 22.1 344 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.345 1.000 0.500 68 93.2 73 ERRCA SECONDARY STRUCTURE . . 3.378 1.000 0.500 39 100.0 39 ERRCA SURFACE . . . . . . . . 4.561 1.000 0.500 49 92.5 53 ERRCA BURIED . . . . . . . . 3.786 1.000 0.500 19 95.0 20 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.303 1.000 0.500 272 75.3 361 ERRMC SECONDARY STRUCTURE . . 3.400 1.000 0.500 156 80.0 195 ERRMC SURFACE . . . . . . . . 4.510 1.000 0.500 196 74.8 262 ERRMC BURIED . . . . . . . . 3.769 1.000 0.500 76 76.8 99 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 894 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 848 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 538 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 630 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 264 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.303 1.000 0.500 272 22.9 1186 ERRALL SECONDARY STRUCTURE . . 3.400 1.000 0.500 156 22.5 694 ERRALL SURFACE . . . . . . . . 4.510 1.000 0.500 196 23.3 842 ERRALL BURIED . . . . . . . . 3.769 1.000 0.500 76 22.1 344 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 1 11 28 52 63 68 73 DISTCA CA (P) 1.37 15.07 38.36 71.23 86.30 73 DISTCA CA (RMS) 0.85 1.56 2.24 2.97 4.01 DISTCA ALL (N) 1 39 108 208 252 272 1186 DISTALL ALL (P) 0.08 3.29 9.11 17.54 21.25 1186 DISTALL ALL (RMS) 0.85 1.56 2.23 3.01 3.98 DISTALL END of the results output