####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 147 ( 588), selected 143 , name T0550TS328_1-D1 # Molecule2: number of CA atoms 143 ( 1138), selected 143 , name T0550-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0550TS328_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 46 - 75 4.93 36.72 LONGEST_CONTINUOUS_SEGMENT: 30 47 - 76 4.89 36.63 LCS_AVERAGE: 15.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 56 - 68 1.96 39.97 LONGEST_CONTINUOUS_SEGMENT: 13 57 - 69 1.92 40.87 LONGEST_CONTINUOUS_SEGMENT: 13 102 - 114 1.85 35.06 LONGEST_CONTINUOUS_SEGMENT: 13 140 - 152 1.77 28.92 LCS_AVERAGE: 6.66 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 58 - 67 0.97 38.37 LONGEST_CONTINUOUS_SEGMENT: 10 142 - 151 0.94 28.01 LONGEST_CONTINUOUS_SEGMENT: 10 143 - 152 0.85 27.13 LCS_AVERAGE: 3.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 143 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 31 Q 31 3 7 17 1 4 5 6 7 8 9 9 12 13 14 15 16 16 17 17 20 20 22 24 LCS_GDT Y 32 Y 32 3 7 17 1 3 4 6 7 8 9 11 12 13 14 15 16 16 17 17 20 20 22 24 LCS_GDT V 33 V 33 5 7 17 3 4 5 6 7 8 9 11 12 13 14 15 16 16 17 18 20 21 23 27 LCS_GDT S 34 S 34 5 7 17 3 4 5 6 7 8 9 11 12 13 14 15 19 20 22 24 25 27 28 29 LCS_GDT F 35 F 35 5 7 21 3 4 5 6 7 8 9 11 12 13 17 19 21 23 24 25 27 27 28 32 LCS_GDT K 36 K 36 5 7 22 3 4 5 6 8 9 10 11 12 14 17 20 21 23 28 29 35 40 43 44 LCS_GDT A 37 A 37 5 7 22 3 4 5 6 7 8 9 11 12 13 14 20 21 23 24 25 31 40 43 44 LCS_GDT P 38 P 38 3 7 23 3 4 4 6 6 7 8 9 10 13 17 20 25 29 32 35 36 40 43 44 LCS_GDT I 39 I 39 3 7 26 3 4 4 6 7 8 9 11 12 13 15 19 23 25 28 33 36 39 43 44 LCS_GDT A 40 A 40 3 5 26 3 3 4 4 7 7 9 11 12 13 17 20 21 23 27 31 35 40 43 44 LCS_GDT S 41 S 41 3 5 26 3 3 3 4 4 6 8 9 11 13 14 19 19 23 24 29 35 40 43 44 LCS_GDT G 42 G 42 3 5 26 3 3 3 6 7 8 9 15 20 21 21 22 23 25 27 29 30 36 37 43 LCS_GDT S 43 S 43 3 11 26 3 3 4 7 10 12 16 18 20 21 21 22 23 25 26 29 30 31 35 38 LCS_GDT D 44 D 44 3 12 26 3 3 5 9 11 12 16 18 19 21 21 22 23 24 25 28 30 33 35 39 LCS_GDT G 45 G 45 6 12 26 3 5 6 9 11 12 16 18 20 21 21 22 25 29 33 35 36 40 43 44 LCS_GDT V 46 V 46 6 12 30 3 5 6 9 11 12 16 18 20 21 21 22 25 29 33 35 36 40 43 44 LCS_GDT T 47 T 47 6 12 30 3 5 6 9 11 12 16 18 20 21 21 22 27 29 33 35 36 40 43 44 LCS_GDT T 48 T 48 6 12 30 4 5 6 9 11 12 16 18 20 21 21 22 23 27 33 35 36 40 43 44 LCS_GDT I 49 I 49 6 12 30 4 5 6 9 11 12 16 18 20 21 21 22 27 29 33 35 36 40 43 44 LCS_GDT Y 50 Y 50 6 12 30 4 5 6 9 11 12 16 18 20 21 21 26 27 29 33 35 36 40 43 44 LCS_GDT V 51 V 51 6 12 30 4 5 6 9 11 12 16 18 20 21 24 26 27 29 33 35 36 40 43 44 LCS_GDT R 52 R 52 6 12 30 4 5 6 9 11 12 16 18 20 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT Y 53 Y 53 6 12 30 4 5 6 7 8 12 16 18 20 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT K 54 K 54 6 12 30 4 5 6 9 11 12 16 18 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT D 55 D 55 6 12 30 4 5 6 9 11 12 16 18 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT N 56 N 56 6 13 30 4 5 5 9 10 12 15 18 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT G 57 G 57 8 13 30 4 5 8 10 11 12 13 16 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT K 58 K 58 10 13 30 4 8 10 10 11 12 16 18 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT V 59 V 59 10 13 30 4 5 10 10 11 13 16 18 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT T 60 T 60 10 13 30 4 8 10 10 11 13 16 18 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT Y 61 Y 61 10 13 30 4 8 10 10 11 13 16 18 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT Q 62 Q 62 10 13 30 4 8 10 10 11 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT L 63 L 63 10 13 30 4 8 10 10 11 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT P 64 P 64 10 13 30 4 8 10 10 11 12 14 17 22 23 24 26 27 29 32 35 36 38 43 44 LCS_GDT I 65 I 65 10 13 30 3 8 10 10 11 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT I 66 I 66 10 13 30 4 8 10 10 11 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT V 67 V 67 10 13 30 4 7 10 10 11 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT S 68 S 68 6 13 30 4 5 10 10 11 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT G 69 G 69 6 13 30 4 5 7 8 11 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT S 70 S 70 3 11 30 0 3 6 8 10 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT T 71 T 71 3 10 30 1 3 4 8 10 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT V 72 V 72 3 6 30 3 3 3 4 5 10 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT N 73 N 73 3 6 30 3 3 3 4 6 12 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT S 74 S 74 3 5 30 3 3 3 7 9 13 14 17 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT Q 75 Q 75 3 5 30 3 3 3 4 7 11 13 15 22 23 24 26 27 29 33 35 36 40 43 44 LCS_GDT D 76 D 76 3 10 30 3 3 4 7 9 11 12 14 18 21 24 26 27 29 33 35 36 40 43 44 LCS_GDT R 77 R 77 4 10 29 3 4 7 10 10 11 12 16 19 22 24 25 26 28 30 30 35 37 40 44 LCS_GDT D 78 D 78 4 10 18 4 4 7 10 10 11 12 16 17 18 20 21 26 28 30 30 32 34 36 39 LCS_GDT I 79 I 79 4 10 18 4 4 7 10 10 11 12 16 17 18 18 24 26 27 30 30 32 34 36 37 LCS_GDT H 80 H 80 4 10 18 4 4 7 10 10 11 12 16 17 18 18 21 24 25 30 30 31 31 36 37 LCS_GDT I 81 I 81 4 10 18 4 4 7 10 10 11 12 16 17 18 18 21 24 25 30 30 31 34 36 37 LCS_GDT A 82 A 82 4 10 18 3 4 7 10 10 11 12 16 17 17 18 21 24 25 30 30 31 31 32 35 LCS_GDT V 83 V 83 4 10 18 3 4 7 10 10 11 12 13 17 17 18 21 24 25 30 30 31 31 32 35 LCS_GDT D 84 D 84 4 10 18 3 4 7 10 10 11 12 13 14 17 18 20 24 25 30 30 31 31 32 35 LCS_GDT K 85 K 85 4 10 18 3 4 6 10 10 11 12 13 15 17 18 21 24 25 30 30 31 31 32 35 LCS_GDT D 86 D 86 4 10 18 3 4 4 5 8 10 11 12 14 17 17 20 24 25 30 30 31 31 32 35 LCS_GDT T 87 T 87 4 5 18 3 4 4 5 6 7 11 12 13 13 14 16 18 24 30 30 31 31 32 35 LCS_GDT L 88 L 88 4 5 18 3 4 4 6 7 8 10 12 15 17 18 20 21 24 30 30 31 31 32 35 LCS_GDT K 89 K 89 4 5 18 4 4 4 5 5 6 10 12 15 17 18 20 21 22 24 25 25 28 29 35 LCS_GDT T 90 T 90 4 5 18 4 4 4 5 5 6 10 12 15 17 18 20 21 22 24 25 25 27 29 30 LCS_GDT L 91 L 91 4 5 17 4 4 4 5 5 5 8 12 15 17 18 20 21 22 24 25 25 27 29 33 LCS_GDT N 92 N 92 4 5 17 4 4 4 5 5 5 6 8 9 11 12 14 21 22 24 25 25 27 29 31 LCS_GDT I 93 I 93 3 3 14 3 3 3 3 4 5 6 7 9 10 11 12 13 16 19 22 24 26 29 31 LCS_GDT E 94 E 94 3 5 14 3 3 3 4 5 6 6 9 11 12 12 13 14 16 18 22 24 27 29 31 LCS_GDT R 95 R 95 3 5 14 3 3 4 4 5 6 6 7 11 12 12 13 14 16 19 22 24 27 29 31 LCS_GDT F 96 F 96 3 5 14 3 3 4 4 5 6 6 9 11 12 12 13 15 17 20 23 25 27 29 31 LCS_GDT S 97 S 97 3 5 14 3 3 4 4 5 6 7 9 11 12 12 13 15 18 20 23 26 27 29 31 LCS_GDT L 98 L 98 3 5 19 0 3 4 4 6 6 8 9 11 12 12 14 18 21 22 24 26 27 29 31 LCS_GDT Y 99 Y 99 3 5 19 1 3 4 4 5 6 7 9 11 12 12 14 15 21 22 24 26 27 29 31 LCS_GDT R 100 R 100 3 6 19 3 3 4 7 8 9 11 12 13 14 16 18 19 21 22 24 26 27 29 31 LCS_GDT P 101 P 101 3 6 19 3 3 4 4 5 8 9 11 13 15 16 18 19 21 22 24 26 27 28 31 LCS_GDT E 102 E 102 4 13 19 3 3 5 6 10 13 13 14 14 15 16 18 19 21 22 24 26 27 29 31 LCS_GDT L 103 L 103 4 13 19 3 3 6 9 11 13 13 14 14 15 16 18 19 21 22 24 26 27 29 31 LCS_GDT W 104 W 104 6 13 19 3 5 6 9 11 13 13 14 14 15 16 18 19 21 22 24 26 27 29 31 LCS_GDT Y 105 Y 105 6 13 19 3 6 6 9 11 13 13 14 14 15 16 18 19 21 22 24 26 27 29 31 LCS_GDT T 106 T 106 6 13 19 3 6 6 9 11 13 13 14 14 15 16 18 19 21 22 24 26 27 29 31 LCS_GDT E 107 E 107 6 13 19 4 6 6 9 11 13 13 14 14 15 16 18 19 21 22 24 26 27 29 31 LCS_GDT M 108 M 108 6 13 19 4 6 6 9 11 13 13 14 14 15 16 18 19 21 22 24 29 29 31 36 LCS_GDT E 109 E 109 6 13 19 4 6 6 9 11 13 13 14 14 15 16 18 19 21 27 30 32 34 36 37 LCS_GDT E 110 E 110 6 13 19 4 6 6 9 12 17 19 23 23 25 26 28 28 29 30 31 32 34 36 38 LCS_GDT D 111 D 111 5 13 19 4 5 6 9 11 13 13 14 14 15 16 22 24 28 30 30 32 34 36 37 LCS_GDT K 112 K 112 5 13 19 4 5 5 8 11 13 13 14 14 15 16 17 19 28 29 30 32 34 36 37 LCS_GDT Y 113 Y 113 5 13 19 3 5 7 10 11 13 13 15 17 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT E 114 E 114 4 13 19 2 3 5 7 11 13 13 14 14 15 16 21 26 27 30 31 32 34 35 38 LCS_GDT F 115 F 115 4 5 19 0 3 4 4 6 7 11 12 13 15 16 18 19 21 22 24 27 30 31 35 LCS_GDT P 116 P 116 4 5 19 3 3 4 4 6 7 9 11 11 14 16 18 19 21 22 24 26 27 29 31 LCS_GDT E 117 E 117 4 7 18 3 3 4 5 7 7 8 11 13 14 16 18 18 21 22 23 26 27 29 31 LCS_GDT T 118 T 118 5 7 13 3 5 6 6 7 7 8 9 10 12 14 17 18 20 22 23 24 25 26 30 LCS_GDT V 119 V 119 5 7 13 4 5 6 6 7 7 8 9 10 11 13 17 18 19 21 23 24 25 27 29 LCS_GDT H 120 H 120 5 7 13 4 5 6 6 7 7 8 9 10 11 13 14 16 16 16 17 21 23 25 27 LCS_GDT I 121 I 121 5 7 13 4 5 6 6 7 7 8 9 10 11 12 14 16 16 16 17 18 20 22 27 LCS_GDT P 122 P 122 5 7 13 4 5 6 6 7 7 8 9 11 11 13 14 16 16 16 17 18 20 22 27 LCS_GDT A 123 A 123 3 7 13 3 3 5 5 6 7 8 9 11 11 13 14 16 16 16 17 18 20 22 27 LCS_GDT G 124 G 124 3 6 13 3 3 3 4 5 7 8 9 10 11 13 14 16 16 16 17 18 20 22 23 LCS_GDT S 125 S 125 5 6 13 3 4 5 5 6 7 8 9 11 11 13 14 16 16 16 17 22 24 28 31 LCS_GDT C 126 C 126 5 6 29 4 4 5 5 6 7 8 9 11 11 13 14 16 20 22 25 29 30 32 33 LCS_GDT V 127 V 127 5 6 29 4 4 5 5 6 7 8 9 11 13 17 22 26 27 30 31 32 32 33 35 LCS_GDT E 128 E 128 5 11 29 4 4 5 5 5 9 13 18 24 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT L 129 L 129 7 11 29 4 6 8 13 20 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT L 130 L 130 7 11 29 4 6 8 15 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT N 131 N 131 7 11 29 4 7 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT I 132 I 132 7 11 29 4 6 12 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT D 133 D 133 7 11 29 3 6 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT F 134 F 134 7 11 29 3 7 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT N 135 N 135 7 11 29 3 7 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT L 136 L 136 7 11 29 3 6 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT Q 137 Q 137 6 11 29 3 5 11 14 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT D 138 D 138 4 11 29 3 4 7 12 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT I 139 I 139 4 11 29 3 4 4 4 5 8 14 22 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT D 140 D 140 4 13 29 3 4 7 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT M 141 M 141 4 13 29 3 4 7 10 14 19 20 22 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT L 142 L 142 10 13 29 6 9 10 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT E 143 E 143 10 13 29 3 3 11 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT K 144 K 144 10 13 29 5 9 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT W 145 W 145 10 13 29 6 9 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT V 146 V 146 10 13 29 6 9 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT L 147 L 147 10 13 29 6 9 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT P 148 P 148 10 13 29 6 9 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT L 149 L 149 10 13 29 5 9 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT T 150 T 150 10 13 29 6 9 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT I 151 I 151 10 13 29 5 9 12 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT V 152 V 152 10 13 29 5 9 13 16 21 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT D 153 D 153 4 12 29 3 4 4 9 15 22 23 23 25 25 27 28 28 29 32 32 32 34 36 38 LCS_GDT D 154 D 154 4 5 29 3 4 4 4 5 7 7 9 12 16 25 27 27 29 32 32 32 34 36 38 LCS_GDT G 155 G 155 3 6 29 3 3 4 4 5 7 7 8 10 10 12 16 21 25 28 29 32 32 36 40 LCS_GDT S 156 S 156 5 6 29 3 5 5 5 6 7 8 9 9 10 12 13 17 22 28 29 31 36 43 44 LCS_GDT Y 157 Y 157 5 6 10 3 5 5 5 5 7 7 11 13 13 14 18 20 23 28 29 36 40 43 44 LCS_GDT A 158 A 158 5 6 10 3 5 5 5 5 7 8 8 9 11 13 16 20 26 32 35 36 40 43 44 LCS_GDT Y 159 Y 159 5 6 10 3 5 5 5 5 7 7 7 10 12 14 17 23 28 33 35 36 40 43 44 LCS_GDT Q 160 Q 160 5 6 10 3 5 5 5 5 7 8 8 10 12 13 16 23 27 33 35 36 40 43 44 LCS_GDT K 165 K 165 4 4 13 3 3 4 4 5 6 8 9 10 10 10 12 14 16 18 20 23 26 29 30 LCS_GDT N 166 N 166 4 4 13 3 4 6 6 7 7 8 9 10 11 12 12 14 17 18 20 23 26 29 30 LCS_GDT Y 167 Y 167 4 5 13 3 3 4 5 5 5 7 9 9 11 12 12 14 17 17 20 24 26 29 31 LCS_GDT A 168 A 168 4 10 13 1 3 4 7 8 10 10 10 10 11 12 12 13 17 17 18 18 19 25 26 LCS_GDT K 169 K 169 3 10 13 1 3 4 7 8 10 10 10 10 11 12 12 13 14 14 15 17 18 21 22 LCS_GDT A 170 A 170 6 10 13 4 6 7 8 8 10 10 10 10 10 12 12 13 14 14 15 17 18 20 20 LCS_GDT L 171 L 171 7 10 13 4 6 7 8 8 10 10 10 10 11 11 11 13 14 14 15 15 17 20 20 LCS_GDT L 172 L 172 7 10 13 4 6 7 8 8 10 10 10 10 11 12 12 13 14 14 15 17 18 20 20 LCS_GDT K 173 K 173 7 10 13 4 6 7 8 8 10 10 10 10 11 12 12 13 14 15 16 17 18 20 21 LCS_GDT V 174 V 174 7 10 13 3 6 7 8 8 10 10 10 10 11 12 12 13 14 14 16 17 18 20 21 LCS_GDT V 175 V 175 7 10 13 3 6 7 8 8 10 10 10 10 11 12 12 13 14 15 16 17 18 20 21 LCS_GDT P 176 P 176 7 10 13 3 5 7 8 8 10 10 10 10 11 12 12 13 14 15 16 17 18 20 21 LCS_GDT F 177 F 177 7 10 13 3 5 7 8 8 10 10 10 10 11 11 12 13 14 15 16 17 20 21 22 LCS_AVERAGE LCS_A: 8.76 ( 3.84 6.66 15.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 13 16 21 22 23 23 25 25 27 28 28 29 33 35 36 40 43 44 GDT PERCENT_AT 4.20 6.29 9.09 11.19 14.69 15.38 16.08 16.08 17.48 17.48 18.88 19.58 19.58 20.28 23.08 24.48 25.17 27.97 30.07 30.77 GDT RMS_LOCAL 0.32 0.63 0.97 1.19 1.61 1.75 1.99 1.99 2.41 2.41 2.91 3.03 3.03 3.48 5.63 5.77 5.89 6.72 6.95 7.08 GDT RMS_ALL_AT 26.74 26.77 28.42 28.40 28.55 28.51 28.44 28.44 28.51 28.51 28.47 28.48 28.48 28.40 35.49 35.46 35.31 35.10 35.05 34.87 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 31 Q 31 28.168 5 0.505 0.505 28.603 0.000 0.000 LGA Y 32 Y 32 27.675 8 0.638 0.638 28.819 0.000 0.000 LGA V 33 V 33 29.172 3 0.226 0.226 29.172 0.000 0.000 LGA S 34 S 34 27.967 2 0.100 0.100 30.759 0.000 0.000 LGA F 35 F 35 29.866 7 0.100 0.100 29.866 0.000 0.000 LGA K 36 K 36 30.301 5 0.415 0.415 30.822 0.000 0.000 LGA A 37 A 37 32.245 1 0.634 0.634 32.319 0.000 0.000 LGA P 38 P 38 33.835 3 0.006 0.006 33.835 0.000 0.000 LGA I 39 I 39 29.735 4 0.673 0.673 31.012 0.000 0.000 LGA A 40 A 40 29.763 1 0.685 0.685 31.950 0.000 0.000 LGA S 41 S 41 29.915 2 0.630 0.630 30.058 0.000 0.000 LGA G 42 G 42 28.705 0 0.290 0.290 29.046 0.000 0.000 LGA S 43 S 43 25.774 2 0.618 0.618 27.316 0.000 0.000 LGA D 44 D 44 19.893 4 0.692 0.692 22.066 0.000 0.000 LGA G 45 G 45 20.080 0 0.669 0.669 20.981 0.000 0.000 LGA V 46 V 46 24.632 3 0.048 0.048 27.873 0.000 0.000 LGA T 47 T 47 28.304 3 0.070 0.070 30.085 0.000 0.000 LGA T 48 T 48 33.992 3 0.142 0.142 36.036 0.000 0.000 LGA I 49 I 49 38.859 4 0.036 0.036 41.194 0.000 0.000 LGA Y 50 Y 50 45.615 8 0.035 0.035 48.094 0.000 0.000 LGA V 51 V 51 50.838 3 0.123 0.123 53.379 0.000 0.000 LGA R 52 R 52 57.863 7 0.025 0.025 60.413 0.000 0.000 LGA Y 53 Y 53 63.261 8 0.033 0.033 66.773 0.000 0.000 LGA K 54 K 54 69.197 5 0.336 0.336 72.224 0.000 0.000 LGA D 55 D 55 75.836 4 0.333 0.333 75.836 0.000 0.000 LGA N 56 N 56 77.323 4 0.234 0.234 77.323 0.000 0.000 LGA G 57 G 57 70.044 0 0.441 0.441 72.640 0.000 0.000 LGA K 58 K 58 66.960 5 0.045 0.045 68.594 0.000 0.000 LGA V 59 V 59 60.345 3 0.139 0.139 62.553 0.000 0.000 LGA T 60 T 60 55.320 3 0.140 0.140 57.240 0.000 0.000 LGA Y 61 Y 61 47.961 8 0.072 0.072 50.628 0.000 0.000 LGA Q 62 Q 62 43.491 5 0.113 0.113 44.854 0.000 0.000 LGA L 63 L 63 35.999 4 0.079 0.079 38.863 0.000 0.000 LGA P 64 P 64 32.145 3 0.041 0.041 33.314 0.000 0.000 LGA I 65 I 65 27.537 4 0.083 0.083 29.659 0.000 0.000 LGA I 66 I 66 22.732 4 0.098 0.098 23.855 0.000 0.000 LGA V 67 V 67 20.105 3 0.174 0.174 21.644 0.000 0.000 LGA S 68 S 68 14.896 2 0.043 0.043 16.217 0.000 0.000 LGA G 69 G 69 15.725 0 0.571 0.571 16.631 0.000 0.000 LGA S 70 S 70 15.557 2 0.612 0.612 17.109 0.000 0.000 LGA T 71 T 71 13.902 3 0.682 0.682 13.972 0.000 0.000 LGA V 72 V 72 15.730 3 0.640 0.640 17.162 0.000 0.000 LGA N 73 N 73 17.404 4 0.606 0.606 20.657 0.000 0.000 LGA S 74 S 74 20.023 2 0.686 0.686 20.023 0.000 0.000 LGA Q 75 Q 75 19.236 5 0.639 0.639 19.236 0.000 0.000 LGA D 76 D 76 18.465 4 0.655 0.655 19.042 0.000 0.000 LGA R 77 R 77 13.185 7 0.493 0.493 15.214 0.000 0.000 LGA D 78 D 78 14.988 4 0.201 0.201 16.459 0.000 0.000 LGA I 79 I 79 13.754 4 0.094 0.094 13.949 0.000 0.000 LGA H 80 H 80 15.464 6 0.308 0.308 15.464 0.000 0.000 LGA I 81 I 81 12.982 4 0.043 0.043 16.705 0.000 0.000 LGA A 82 A 82 16.991 1 0.097 0.097 16.991 0.000 0.000 LGA V 83 V 83 16.444 3 0.051 0.051 20.875 0.000 0.000 LGA D 84 D 84 21.515 4 0.516 0.516 22.791 0.000 0.000 LGA K 85 K 85 22.787 5 0.578 0.578 22.787 0.000 0.000 LGA D 86 D 86 22.955 4 0.054 0.054 23.341 0.000 0.000 LGA T 87 T 87 22.221 3 0.391 0.391 22.802 0.000 0.000 LGA L 88 L 88 20.226 4 0.545 0.545 20.491 0.000 0.000 LGA K 89 K 89 22.289 5 0.611 0.611 25.946 0.000 0.000 LGA T 90 T 90 27.282 3 0.175 0.175 29.093 0.000 0.000 LGA L 91 L 91 25.013 4 0.576 0.576 25.372 0.000 0.000 LGA N 92 N 92 21.721 4 0.621 0.621 25.026 0.000 0.000 LGA I 93 I 93 25.682 4 0.629 0.629 25.682 0.000 0.000 LGA E 94 E 94 25.959 5 0.051 0.051 25.959 0.000 0.000 LGA R 95 R 95 22.095 7 0.386 0.386 23.703 0.000 0.000 LGA F 96 F 96 26.660 7 0.115 0.115 30.184 0.000 0.000 LGA S 97 S 97 29.520 2 0.156 0.156 29.831 0.000 0.000 LGA L 98 L 98 32.160 4 0.666 0.666 35.045 0.000 0.000 LGA Y 99 Y 99 36.771 8 0.636 0.636 38.968 0.000 0.000 LGA R 100 R 100 38.981 7 0.551 0.551 38.981 0.000 0.000 LGA P 101 P 101 39.860 3 0.138 0.138 39.911 0.000 0.000 LGA E 102 E 102 39.849 5 0.165 0.165 39.849 0.000 0.000 LGA L 103 L 103 34.082 4 0.530 0.530 36.117 0.000 0.000 LGA W 104 W 104 32.009 10 0.638 0.638 32.869 0.000 0.000 LGA Y 105 Y 105 25.416 8 0.050 0.050 27.614 0.000 0.000 LGA T 106 T 106 20.801 3 0.142 0.142 22.239 0.000 0.000 LGA E 107 E 107 14.293 5 0.046 0.046 16.709 0.000 0.000 LGA M 108 M 108 10.420 4 0.118 0.118 11.458 1.071 0.536 LGA E 109 E 109 9.304 5 0.259 0.259 9.477 7.500 3.333 LGA E 110 E 110 5.371 5 0.133 0.133 6.955 17.500 7.778 LGA D 111 D 111 10.274 4 0.231 0.231 10.823 0.714 0.357 LGA K 112 K 112 9.592 5 0.182 0.182 9.648 2.619 1.164 LGA Y 113 Y 113 6.018 8 0.564 0.564 7.514 11.071 3.690 LGA E 114 E 114 10.804 5 0.604 0.604 13.767 0.714 0.317 LGA F 115 F 115 16.218 7 0.207 0.207 18.366 0.000 0.000 LGA P 116 P 116 22.921 3 0.672 0.672 23.610 0.000 0.000 LGA E 117 E 117 23.299 5 0.260 0.260 23.322 0.000 0.000 LGA T 118 T 118 23.285 3 0.569 0.569 23.296 0.000 0.000 LGA V 119 V 119 24.519 3 0.025 0.025 24.519 0.000 0.000 LGA H 120 H 120 24.637 6 0.019 0.019 26.278 0.000 0.000 LGA I 121 I 121 26.816 4 0.602 0.602 27.539 0.000 0.000 LGA P 122 P 122 26.632 3 0.129 0.129 26.632 0.000 0.000 LGA A 123 A 123 26.925 1 0.059 0.059 26.934 0.000 0.000 LGA G 124 G 124 25.304 0 0.552 0.552 25.738 0.000 0.000 LGA S 125 S 125 22.459 2 0.627 0.627 23.200 0.000 0.000 LGA C 126 C 126 17.858 2 0.297 0.297 19.531 0.000 0.000 LGA V 127 V 127 13.022 3 0.080 0.080 14.917 0.000 0.000 LGA E 128 E 128 7.323 5 0.543 0.543 8.642 17.619 7.831 LGA L 129 L 129 2.734 4 0.649 0.649 4.189 64.405 32.202 LGA L 130 L 130 2.282 4 0.061 0.061 2.282 70.952 35.476 LGA N 131 N 131 2.036 4 0.325 0.325 2.261 70.952 35.476 LGA I 132 I 132 1.844 4 0.238 0.238 1.844 79.286 39.643 LGA D 133 D 133 2.259 4 0.211 0.211 2.259 75.119 37.560 LGA F 134 F 134 0.968 7 0.048 0.048 2.995 75.476 27.446 LGA N 135 N 135 1.309 4 0.140 0.140 1.309 90.595 45.298 LGA L 136 L 136 1.427 4 0.662 0.662 1.554 79.286 39.643 LGA Q 137 Q 137 2.732 5 0.102 0.102 2.995 61.071 27.143 LGA D 138 D 138 2.109 4 0.250 0.250 4.189 58.333 29.167 LGA I 139 I 139 5.391 4 0.290 0.290 5.391 31.667 15.833 LGA D 140 D 140 2.819 4 0.272 0.272 3.856 51.905 25.952 LGA M 141 M 141 5.590 4 0.465 0.465 5.590 29.048 14.524 LGA L 142 L 142 2.145 4 0.627 0.627 2.744 67.024 33.512 LGA E 143 E 143 1.528 5 0.217 0.217 1.528 86.071 38.254 LGA K 144 K 144 0.455 5 0.123 0.123 1.052 95.357 42.381 LGA W 145 W 145 0.581 10 0.096 0.096 1.047 88.214 25.204 LGA V 146 V 146 0.728 3 0.084 0.084 1.367 88.214 50.408 LGA L 147 L 147 1.574 4 0.077 0.077 1.574 81.548 40.774 LGA P 148 P 148 1.069 3 0.031 0.031 1.848 79.286 45.306 LGA L 149 L 149 1.203 4 0.110 0.110 1.362 81.429 40.714 LGA T 150 T 150 1.112 3 0.173 0.173 2.432 75.119 42.925 LGA I 151 I 151 1.391 4 0.244 0.244 1.904 83.929 41.964 LGA V 152 V 152 2.295 3 0.092 0.092 3.447 65.119 37.211 LGA D 153 D 153 4.429 4 0.634 0.634 8.527 28.690 14.345 LGA D 154 D 154 10.567 4 0.052 0.052 14.571 1.190 0.595 LGA G 155 G 155 13.924 0 0.696 0.696 15.205 0.000 0.000 LGA S 156 S 156 17.299 2 0.138 0.138 17.299 0.000 0.000 LGA Y 157 Y 157 18.791 8 0.591 0.591 19.745 0.000 0.000 LGA A 158 A 158 22.326 1 0.393 0.393 22.326 0.000 0.000 LGA Y 159 Y 159 22.013 8 0.389 0.389 23.281 0.000 0.000 LGA Q 160 Q 160 26.544 5 0.288 0.288 29.590 0.000 0.000 LGA K 165 K 165 37.748 5 0.505 0.505 37.780 0.000 0.000 LGA N 166 N 166 38.142 4 0.153 0.153 38.240 0.000 0.000 LGA Y 167 Y 167 38.025 8 0.664 0.664 38.212 0.000 0.000 LGA A 168 A 168 38.087 1 0.602 0.602 38.087 0.000 0.000 LGA K 169 K 169 34.296 5 0.374 0.374 35.192 0.000 0.000 LGA A 170 A 170 34.572 1 0.649 0.649 34.897 0.000 0.000 LGA L 171 L 171 31.570 4 0.245 0.245 32.333 0.000 0.000 LGA L 172 L 172 29.368 4 0.205 0.205 30.553 0.000 0.000 LGA K 173 K 173 25.434 5 0.150 0.150 26.540 0.000 0.000 LGA V 174 V 174 27.847 3 0.059 0.059 27.847 0.000 0.000 LGA V 175 V 175 24.705 3 0.165 0.165 26.209 0.000 0.000 LGA P 176 P 176 28.290 3 0.188 0.188 28.290 0.000 0.000 LGA F 177 F 177 26.372 7 0.021 0.021 28.360 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 143 572 572 100.00 1138 572 50.26 143 SUMMARY(RMSD_GDC): 24.147 24.100 24.100 12.714 6.182 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 147 143 4.0 23 1.99 14.510 13.121 1.101 LGA_LOCAL RMSD: 1.989 Number of atoms: 23 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 28.444 Number of assigned atoms: 143 Std_ASGN_ATOMS RMSD: 24.147 Standard rmsd on all 143 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.752202 * X + 0.645768 * Y + 0.131060 * Z + 44.456379 Y_new = 0.025773 * X + 0.227577 * Y + -0.973419 * Z + 127.398491 Z_new = -0.658429 * X + -0.728830 * Y + -0.187827 * Z + 173.109879 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.107343 0.718729 -1.823019 [DEG: 178.0377 41.1802 -104.4513 ] ZXZ: 0.133834 1.759745 -2.406899 [DEG: 7.6681 100.8260 -137.9052 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0550TS328_1-D1 REMARK 2: T0550-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0550TS328_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 147 143 4.0 23 1.99 13.121 24.15 REMARK ---------------------------------------------------------- MOLECULE T0550TS328_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0550 REMARK MODEL 1 REMARK PARENT 2pn5_A ATOM 121 N GLN 31 79.750 2.580 68.423 1.00 3.00 N ATOM 122 CA GLN 31 78.992 3.255 69.460 1.00 3.00 C ATOM 123 C GLN 31 78.376 4.586 69.055 1.00 3.00 C ATOM 124 O GLN 31 78.157 5.440 69.892 1.00 3.00 O ATOM 125 N TYR 32 78.197 4.795 67.760 1.00 3.00 N ATOM 126 CA TYR 32 77.824 6.097 67.217 1.00 3.00 C ATOM 127 C TYR 32 76.799 6.960 67.926 1.00 3.00 C ATOM 128 O TYR 32 76.985 8.156 68.018 1.00 3.00 O ATOM 129 N VAL 33 75.682 6.399 68.339 1.00 3.00 N ATOM 130 CA VAL 33 74.670 7.224 68.966 1.00 3.00 C ATOM 131 C VAL 33 73.171 7.459 68.762 1.00 3.00 C ATOM 132 O VAL 33 72.756 7.995 67.734 1.00 3.00 O ATOM 133 N SER 34 72.373 7.051 69.747 1.00 3.00 N ATOM 134 CA SER 34 70.920 7.188 69.670 1.00 3.00 C ATOM 135 C SER 34 70.405 8.478 70.296 1.00 3.00 C ATOM 136 O SER 34 70.921 8.936 71.320 1.00 3.00 O ATOM 137 N PHE 35 69.385 9.054 69.665 1.00 3.00 N ATOM 138 CA PHE 35 68.750 10.276 70.140 1.00 3.00 C ATOM 139 C PHE 35 67.243 10.082 70.251 1.00 3.00 C ATOM 140 O PHE 35 66.592 9.697 69.279 1.00 3.00 O ATOM 141 N LYS 36 66.700 10.345 71.437 1.00 3.00 N ATOM 142 CA LYS 36 65.248 10.302 71.657 1.00 3.00 C ATOM 143 C LYS 36 63.739 10.391 71.427 1.00 3.00 C ATOM 144 O LYS 36 63.218 9.820 70.464 1.00 3.00 O ATOM 145 N ALA 37 63.021 11.117 72.275 1.00 3.00 N ATOM 146 CA ALA 37 61.571 11.234 72.117 1.00 3.00 C ATOM 147 C ALA 37 61.076 12.614 71.637 1.00 3.00 C ATOM 148 O ALA 37 59.938 12.996 71.898 1.00 3.00 O ATOM 149 N PRO 38 61.923 13.341 70.904 1.00 3.00 N ATOM 150 CA PRO 38 61.568 14.677 70.428 1.00 3.00 C ATOM 151 C PRO 38 60.299 14.778 69.622 1.00 3.00 C ATOM 152 O PRO 38 59.547 15.755 69.738 1.00 3.00 O ATOM 153 N ILE 39 60.036 13.759 68.815 1.00 9.00 N ATOM 154 CA ILE 39 58.856 13.763 67.985 1.00 9.00 C ATOM 155 C ILE 39 57.602 13.896 68.840 1.00 9.00 C ATOM 156 O ILE 39 56.514 14.159 68.316 1.00 9.00 O ATOM 157 N ALA 40 57.744 13.734 70.149 1.00 3.00 N ATOM 158 CA ALA 40 56.582 13.839 71.037 1.00 3.00 C ATOM 159 C ALA 40 56.245 15.261 71.435 1.00 3.00 C ATOM 160 O ALA 40 55.116 15.521 71.847 1.00 3.00 O ATOM 161 N SER 41 57.206 16.177 71.337 1.00 3.00 N ATOM 162 CA SER 41 56.940 17.567 71.690 1.00 3.00 C ATOM 163 C SER 41 57.482 18.560 70.653 1.00 3.00 C ATOM 164 O SER 41 57.637 19.734 70.955 1.00 3.00 O ATOM 165 N GLY 42 57.758 18.065 69.444 1.00 3.00 N ATOM 166 CA GLY 42 58.295 18.855 68.339 1.00 3.00 C ATOM 167 C GLY 42 57.436 19.535 67.270 1.00 3.00 C ATOM 168 O GLY 42 56.689 18.870 66.546 1.00 3.00 O ATOM 169 N SER 43 57.557 20.856 67.190 1.00 3.00 N ATOM 170 CA SER 43 56.890 21.653 66.163 1.00 3.00 C ATOM 171 C SER 43 57.839 21.887 64.977 1.00 3.00 C ATOM 172 O SER 43 59.020 21.532 65.043 1.00 3.00 O ATOM 173 N ASP 44 57.316 22.462 63.895 1.00 3.00 N ATOM 174 CA ASP 44 58.143 22.881 62.764 1.00 3.00 C ATOM 175 C ASP 44 59.160 23.938 63.199 1.00 3.00 C ATOM 176 O ASP 44 58.903 24.715 64.125 1.00 3.00 O ATOM 177 N GLY 45 60.316 23.960 62.540 1.00 3.00 N ATOM 178 CA GLY 45 61.368 24.918 62.873 1.00 3.00 C ATOM 179 C GLY 45 62.644 24.702 62.090 1.00 3.00 C ATOM 180 O GLY 45 62.620 24.151 60.987 1.00 3.00 O ATOM 181 N VAL 46 63.757 25.151 62.661 1.00 3.00 N ATOM 182 CA VAL 46 65.072 24.957 62.062 1.00 3.00 C ATOM 183 C VAL 46 65.930 24.025 62.900 1.00 3.00 C ATOM 184 O VAL 46 66.216 24.308 64.069 1.00 3.00 O ATOM 185 N THR 47 66.333 22.914 62.294 1.00 3.00 N ATOM 186 CA THR 47 67.077 21.877 63.003 1.00 3.00 C ATOM 187 C THR 47 68.446 21.624 62.386 1.00 3.00 C ATOM 188 O THR 47 68.614 21.680 61.165 1.00 3.00 O ATOM 189 N THR 48 69.419 21.344 63.248 1.00 3.00 N ATOM 190 CA THR 48 70.814 21.210 62.843 1.00 3.00 C ATOM 191 C THR 48 71.499 20.078 63.609 1.00 3.00 C ATOM 192 O THR 48 71.032 19.665 64.670 1.00 3.00 O ATOM 193 N ILE 49 72.597 19.569 63.062 1.00 3.00 N ATOM 194 CA ILE 49 73.491 18.685 63.812 1.00 3.00 C ATOM 195 C ILE 49 74.951 19.057 63.551 1.00 3.00 C ATOM 196 O ILE 49 75.359 19.251 62.405 1.00 3.00 O ATOM 197 N TYR 50 75.723 19.167 64.625 1.00 3.00 N ATOM 198 CA TYR 50 77.089 19.654 64.541 1.00 3.00 C ATOM 199 C TYR 50 78.048 18.636 65.139 1.00 3.00 C ATOM 200 O TYR 50 77.830 18.143 66.249 1.00 3.00 O ATOM 201 N VAL 51 79.107 18.323 64.395 1.00 3.00 N ATOM 202 CA VAL 51 80.119 17.360 64.837 1.00 3.00 C ATOM 203 C VAL 51 81.501 18.015 64.862 1.00 3.00 C ATOM 204 O VAL 51 82.095 18.295 63.816 1.00 3.00 O ATOM 205 N ARG 52 81.997 18.259 66.071 1.00 3.00 N ATOM 206 CA ARG 52 83.277 18.935 66.263 1.00 3.00 C ATOM 207 C ARG 52 84.325 18.016 66.865 1.00 3.00 C ATOM 208 O ARG 52 84.085 17.372 67.886 1.00 3.00 O ATOM 209 N TYR 53 85.487 17.966 66.221 1.00 3.00 N ATOM 210 CA TYR 53 86.614 17.178 66.707 1.00 3.00 C ATOM 211 C TYR 53 87.299 17.885 67.853 1.00 3.00 C ATOM 212 O TYR 53 87.926 18.927 67.664 1.00 3.00 O ATOM 213 N LYS 54 87.168 17.323 69.050 1.00 3.00 N ATOM 214 CA LYS 54 87.784 17.905 70.237 1.00 3.00 C ATOM 215 C LYS 54 89.198 17.376 70.458 1.00 3.00 C ATOM 216 O LYS 54 89.555 16.301 69.962 1.00 3.00 O ATOM 217 N ASP 55 89.988 18.152 71.203 1.00 3.00 N ATOM 218 CA ASP 55 91.401 17.858 71.494 1.00 3.00 C ATOM 219 C ASP 55 92.299 18.066 70.265 1.00 3.00 C ATOM 220 O ASP 55 92.002 18.912 69.414 1.00 3.00 O ATOM 221 N ASN 56 93.391 17.305 70.176 1.00 3.00 N ATOM 222 CA ASN 56 94.347 17.442 69.073 1.00 3.00 C ATOM 223 C ASN 56 93.877 16.817 67.769 1.00 3.00 C ATOM 224 O ASN 56 94.559 15.947 67.218 1.00 3.00 O ATOM 225 N GLY 57 92.719 17.269 67.281 1.00 3.00 N ATOM 226 CA GLY 57 92.083 16.726 66.076 1.00 3.00 C ATOM 227 C GLY 57 91.048 17.707 65.523 1.00 3.00 C ATOM 228 O GLY 57 89.940 17.801 66.048 1.00 3.00 O ATOM 229 N LYS 58 91.412 18.430 64.466 1.00 3.00 N ATOM 230 CA LYS 58 90.513 19.418 63.858 1.00 3.00 C ATOM 231 C LYS 58 89.463 18.762 62.970 1.00 3.00 C ATOM 232 O LYS 58 89.794 17.954 62.099 1.00 3.00 O ATOM 233 N VAL 59 88.202 19.120 63.204 1.00 3.00 N ATOM 234 CA VAL 59 87.064 18.563 62.476 1.00 3.00 C ATOM 235 C VAL 59 85.824 19.391 62.751 1.00 3.00 C ATOM 236 O VAL 59 85.371 19.483 63.889 1.00 3.00 O ATOM 237 N THR 60 85.279 19.996 61.704 1.00 3.00 N ATOM 238 CA THR 60 83.997 20.674 61.813 1.00 3.00 C ATOM 239 C THR 60 83.073 20.294 60.666 1.00 3.00 C ATOM 240 O THR 60 83.280 20.711 59.525 1.00 3.00 O ATOM 241 N TYR 61 82.058 19.497 60.983 1.00 3.00 N ATOM 242 CA TYR 61 81.013 19.163 60.025 1.00 3.00 C ATOM 243 C TYR 61 79.606 19.429 60.569 1.00 3.00 C ATOM 244 O TYR 61 79.357 19.319 61.776 1.00 3.00 O ATOM 245 N GLN 62 78.699 19.776 59.657 1.00 3.00 N ATOM 246 CA GLN 62 77.390 20.315 60.001 1.00 3.00 C ATOM 247 C GLN 62 76.342 19.857 58.998 1.00 3.00 C ATOM 248 O GLN 62 76.625 19.767 57.805 1.00 3.00 O ATOM 249 N LEU 63 75.131 19.577 59.474 1.00 3.00 N ATOM 250 CA LEU 63 74.057 19.126 58.586 1.00 3.00 C ATOM 251 C LEU 63 72.689 19.707 58.914 1.00 3.00 C ATOM 252 O LEU 63 72.294 19.790 60.081 1.00 3.00 O ATOM 253 N PRO 64 71.976 20.105 57.863 1.00 3.00 N ATOM 254 CA PRO 64 70.587 20.544 57.970 1.00 3.00 C ATOM 255 C PRO 64 69.703 19.311 58.166 1.00 3.00 C ATOM 256 O PRO 64 69.882 18.303 57.483 1.00 3.00 O ATOM 257 N ILE 65 68.762 19.389 59.101 1.00 3.00 N ATOM 258 CA ILE 65 67.871 18.267 59.410 1.00 3.00 C ATOM 259 C ILE 65 66.414 18.682 59.248 1.00 3.00 C ATOM 260 O ILE 65 65.913 19.532 59.983 1.00 3.00 O ATOM 261 N ILE 66 65.736 18.076 58.284 1.00 3.00 N ATOM 262 CA ILE 66 64.369 18.464 57.959 1.00 3.00 C ATOM 263 C ILE 66 63.347 17.699 58.797 1.00 3.00 C ATOM 264 O ILE 66 63.233 16.477 58.707 1.00 3.00 O ATOM 265 N VAL 67 62.612 18.447 59.613 1.00 3.00 N ATOM 266 CA VAL 67 61.549 17.910 60.451 1.00 3.00 C ATOM 267 C VAL 67 60.329 17.524 59.611 1.00 3.00 C ATOM 268 O VAL 67 59.963 18.240 58.678 1.00 3.00 O ATOM 269 N SER 68 59.710 16.393 59.942 1.00 3.00 N ATOM 270 CA SER 68 58.477 15.968 59.285 1.00 3.00 C ATOM 271 C SER 68 57.316 15.935 60.264 1.00 3.00 C ATOM 272 O SER 68 57.410 15.328 61.333 1.00 3.00 O ATOM 273 N GLY 69 56.226 16.599 59.888 1.00 3.00 N ATOM 274 CA GLY 69 55.039 16.715 60.739 1.00 3.00 C ATOM 275 C GLY 69 54.242 15.416 60.754 1.00 3.00 C ATOM 276 O GLY 69 53.825 14.945 61.812 1.00 3.00 O ATOM 277 N SER 70 54.045 14.846 59.567 1.00 3.00 N ATOM 278 CA SER 70 53.177 13.689 59.382 1.00 3.00 C ATOM 279 C SER 70 53.676 12.764 58.260 1.00 3.00 C ATOM 280 O SER 70 53.980 13.204 57.150 1.00 3.00 O ATOM 281 N THR 71 53.766 11.464 58.554 1.00 3.00 N ATOM 282 CA THR 71 54.249 10.508 57.557 1.00 3.00 C ATOM 283 C THR 71 53.377 10.399 56.321 1.00 3.00 C ATOM 284 O THR 71 53.812 9.850 55.322 1.00 3.00 O ATOM 285 N VAL 72 52.143 10.917 56.367 1.00 3.00 N ATOM 286 CA VAL 72 51.292 10.866 55.179 1.00 3.00 C ATOM 287 C VAL 72 51.920 11.721 54.088 1.00 3.00 C ATOM 288 O VAL 72 51.641 11.553 52.900 1.00 3.00 O ATOM 289 N ASN 73 52.761 12.670 54.492 1.00 9.00 N ATOM 290 CA ASN 73 53.410 13.554 53.524 1.00 9.00 C ATOM 291 C ASN 73 54.519 12.835 52.787 1.00 9.00 C ATOM 292 O ASN 73 54.911 13.270 51.719 1.00 9.00 O ATOM 293 N SER 74 55.022 11.745 53.340 1.00 9.00 N ATOM 294 CA SER 74 56.069 10.992 52.686 1.00 9.00 C ATOM 295 C SER 74 55.431 9.703 52.163 1.00 9.00 C ATOM 296 O SER 74 54.322 9.358 52.538 1.00 9.00 O ATOM 297 N GLN 75 56.145 8.981 51.306 1.00 9.00 N ATOM 298 CA GLN 75 55.590 7.751 50.741 1.00 9.00 C ATOM 299 C GLN 75 55.456 6.635 51.766 1.00 9.00 C ATOM 300 O GLN 75 54.905 5.572 51.476 1.00 9.00 O ATOM 301 N ASP 76 55.954 6.881 52.980 1.00 9.00 N ATOM 302 CA ASP 76 55.874 5.885 54.040 1.00 9.00 C ATOM 303 C ASP 76 54.424 5.631 54.438 1.00 9.00 C ATOM 304 O ASP 76 54.079 4.507 54.743 1.00 9.00 O ATOM 305 N ARG 77 53.598 6.667 54.453 1.00 9.00 N ATOM 306 CA ARG 77 52.202 6.497 54.831 1.00 9.00 C ATOM 307 C ARG 77 51.232 7.287 53.960 1.00 9.00 C ATOM 308 O ARG 77 50.145 7.651 54.396 1.00 9.00 O ATOM 309 N ASP 78 51.625 7.559 52.720 1.00 3.00 N ATOM 310 CA ASP 78 50.723 8.308 51.862 1.00 3.00 C ATOM 311 C ASP 78 50.940 8.076 50.392 1.00 3.00 C ATOM 312 O ASP 78 51.987 7.577 49.969 1.00 3.00 O ATOM 313 N ILE 79 49.937 8.434 49.603 1.00 3.00 N ATOM 314 CA ILE 79 50.012 8.333 48.154 1.00 3.00 C ATOM 315 C ILE 79 49.420 9.606 47.604 1.00 3.00 C ATOM 316 O ILE 79 48.610 10.263 48.263 1.00 3.00 O ATOM 317 N HIS 80 49.860 10.013 46.406 1.00 3.00 N ATOM 318 CA HIS 80 49.313 11.219 45.794 1.00 3.00 C ATOM 319 C HIS 80 47.970 11.505 45.154 1.00 3.00 C ATOM 320 O HIS 80 46.941 11.013 45.616 1.00 3.00 O ATOM 321 N ILE 81 47.979 12.300 44.089 1.00 3.00 N ATOM 322 CA ILE 81 46.771 12.521 43.305 1.00 3.00 C ATOM 323 C ILE 81 47.006 12.074 41.869 1.00 3.00 C ATOM 324 O ILE 81 48.004 12.440 41.242 1.00 3.00 O ATOM 325 N ALA 82 46.079 11.268 41.363 1.00 3.00 N ATOM 326 CA ALA 82 46.136 10.808 39.993 1.00 3.00 C ATOM 327 C ALA 82 44.956 11.407 39.230 1.00 3.00 C ATOM 328 O ALA 82 43.809 11.253 39.646 1.00 3.00 O ATOM 329 N VAL 83 45.249 12.092 38.125 1.00 3.00 N ATOM 330 CA VAL 83 44.228 12.713 37.284 1.00 3.00 C ATOM 331 C VAL 83 44.276 12.053 35.917 1.00 3.00 C ATOM 332 O VAL 83 45.352 11.932 35.337 1.00 3.00 O ATOM 333 N ASP 84 43.120 11.648 35.389 1.00 3.00 N ATOM 334 CA ASP 84 43.071 10.940 34.097 1.00 3.00 C ATOM 335 C ASP 84 43.588 11.725 32.887 1.00 3.00 C ATOM 336 O ASP 84 43.929 11.120 31.878 1.00 3.00 O ATOM 337 N LYS 85 43.646 13.050 32.975 1.00 3.00 N ATOM 338 CA LYS 85 44.248 13.867 31.921 1.00 3.00 C ATOM 339 C LYS 85 44.951 15.082 32.531 1.00 3.00 C ATOM 340 O LYS 85 44.587 15.512 33.622 1.00 3.00 O ATOM 341 N ASP 86 45.964 15.642 31.836 1.00 3.00 N ATOM 342 CA ASP 86 46.540 16.931 32.267 1.00 3.00 C ATOM 343 C ASP 86 45.777 18.166 31.764 1.00 3.00 C ATOM 344 O ASP 86 45.776 19.205 32.429 1.00 3.00 O ATOM 345 N THR 87 45.162 18.066 30.586 1.00 3.00 N ATOM 346 CA THR 87 44.369 19.165 30.036 1.00 3.00 C ATOM 347 C THR 87 42.971 18.606 29.810 1.00 3.00 C ATOM 348 O THR 87 42.316 18.923 28.814 1.00 3.00 O ATOM 349 N LEU 88 42.511 17.770 30.732 1.00 3.00 N ATOM 350 CA LEU 88 41.193 17.153 30.631 1.00 3.00 C ATOM 351 C LEU 88 40.241 17.690 31.674 1.00 3.00 C ATOM 352 O LEU 88 40.623 18.492 32.531 1.00 3.00 O ATOM 353 N LYS 89 39.009 17.228 31.612 1.00 3.00 N ATOM 354 CA LYS 89 37.966 17.638 32.539 1.00 3.00 C ATOM 355 C LYS 89 36.700 16.882 32.156 1.00 3.00 C ATOM 356 O LYS 89 36.556 16.453 31.016 1.00 3.00 O ATOM 357 N THR 90 35.796 16.715 33.106 1.00 3.00 N ATOM 358 CA THR 90 34.566 16.009 32.825 1.00 3.00 C ATOM 359 C THR 90 34.681 14.583 33.339 1.00 3.00 C ATOM 360 O THR 90 33.681 13.873 33.450 1.00 3.00 O ATOM 361 N LEU 91 35.906 14.179 33.654 1.00 3.00 N ATOM 362 CA LEU 91 36.469 12.685 34.541 1.00 3.00 C ATOM 363 C LEU 91 37.730 13.201 35.210 1.00 3.00 C ATOM 364 O LEU 91 38.844 13.088 34.706 1.00 3.00 O ATOM 365 N ASN 92 37.575 13.803 36.390 1.00 3.00 N ATOM 366 CA ASN 92 38.757 14.229 37.141 1.00 3.00 C ATOM 367 C ASN 92 39.277 13.084 37.977 1.00 3.00 C ATOM 368 O ASN 92 38.488 12.313 38.527 1.00 3.00 O ATOM 369 N ILE 93 40.598 12.866 38.132 1.00 3.00 N ATOM 370 CA ILE 93 40.903 11.752 39.038 1.00 3.00 C ATOM 371 C ILE 93 40.496 12.145 40.471 1.00 3.00 C ATOM 372 O ILE 93 40.628 13.321 40.830 1.00 3.00 O ATOM 373 N GLU 94 40.014 11.187 41.237 1.00 9.00 N ATOM 374 CA GLU 94 39.683 11.301 42.632 1.00 9.00 C ATOM 375 C GLU 94 40.817 11.905 43.457 1.00 9.00 C ATOM 376 O GLU 94 40.572 12.662 44.404 1.00 9.00 O ATOM 377 N ARG 95 42.063 11.572 43.100 1.00 3.00 N ATOM 378 CA ARG 95 43.209 12.103 43.828 1.00 3.00 C ATOM 379 C ARG 95 43.238 11.647 45.270 1.00 3.00 C ATOM 380 O ARG 95 43.671 12.414 46.139 1.00 3.00 O ATOM 381 N PHE 96 42.797 10.406 45.553 1.00 3.00 N ATOM 382 CA PHE 96 42.753 9.944 46.936 1.00 3.00 C ATOM 383 C PHE 96 43.816 8.926 47.301 1.00 3.00 C ATOM 384 O PHE 96 43.776 8.359 48.400 1.00 3.00 O ATOM 385 N SER 97 44.816 8.700 46.451 1.00 3.00 N ATOM 386 CA SER 97 45.973 7.920 46.899 1.00 3.00 C ATOM 387 C SER 97 45.772 8.229 48.656 1.00 3.00 C ATOM 388 O SER 97 45.398 9.390 48.838 1.00 3.00 O ATOM 389 N LEU 98 45.791 7.314 49.622 1.00 3.00 N ATOM 390 CA LEU 98 45.335 7.628 50.977 1.00 3.00 C ATOM 391 C LEU 98 46.133 6.826 51.999 1.00 3.00 C ATOM 392 O LEU 98 46.867 5.903 51.648 1.00 3.00 O ATOM 393 N TYR 99 45.982 7.196 53.275 1.00 3.00 N ATOM 394 CA TYR 99 46.670 6.517 54.371 1.00 3.00 C ATOM 395 C TYR 99 45.698 5.587 55.124 1.00 3.00 C ATOM 396 O TYR 99 44.501 5.875 55.198 1.00 3.00 O ATOM 397 N ARG 100 46.220 4.468 55.627 1.00 3.00 N ATOM 398 CA ARG 100 45.420 3.507 56.392 1.00 3.00 C ATOM 399 C ARG 100 46.061 3.340 57.773 1.00 3.00 C ATOM 400 O ARG 100 47.199 3.744 57.974 1.00 3.00 O ATOM 401 N PRO 101 45.315 2.742 58.701 1.00 3.00 N ATOM 402 CA PRO 101 45.846 2.514 60.038 1.00 3.00 C ATOM 403 C PRO 101 45.496 3.555 61.074 1.00 3.00 C ATOM 404 O PRO 101 45.976 3.472 62.211 1.00 3.00 O ATOM 405 N GLU 102 44.679 4.536 60.714 1.00 3.00 N ATOM 406 CA GLU 102 44.276 5.579 61.654 1.00 3.00 C ATOM 407 C GLU 102 43.378 6.427 60.742 1.00 3.00 C ATOM 408 O GLU 102 42.259 6.775 61.122 1.00 3.00 O ATOM 409 N LEU 103 43.869 6.742 59.544 1.00 3.00 N ATOM 410 CA LEU 103 43.174 7.642 58.621 1.00 3.00 C ATOM 411 C LEU 103 42.073 6.915 57.858 1.00 3.00 C ATOM 412 O LEU 103 42.351 6.078 56.997 1.00 3.00 O ATOM 413 N TRP 104 40.829 7.257 58.178 1.00 3.00 N ATOM 414 CA TRP 104 39.652 6.593 57.618 1.00 3.00 C ATOM 415 C TRP 104 39.059 7.377 56.442 1.00 3.00 C ATOM 416 O TRP 104 38.436 6.796 55.547 1.00 3.00 O ATOM 417 N TYR 105 39.264 8.696 56.453 1.00 3.00 N ATOM 418 CA TYR 105 38.779 9.585 55.395 1.00 3.00 C ATOM 419 C TYR 105 39.654 10.831 55.263 1.00 3.00 C ATOM 420 O TYR 105 40.447 11.146 56.158 1.00 3.00 O ATOM 421 N THR 106 39.497 11.534 54.139 1.00 3.00 N ATOM 422 CA THR 106 40.221 12.778 53.877 1.00 3.00 C ATOM 423 C THR 106 39.294 13.939 53.483 1.00 3.00 C ATOM 424 O THR 106 38.091 13.759 53.261 1.00 3.00 O ATOM 425 N GLU 107 39.886 15.129 53.405 1.00 3.00 N ATOM 426 CA GLU 107 39.207 16.347 53.004 1.00 3.00 C ATOM 427 C GLU 107 39.472 16.739 51.561 1.00 3.00 C ATOM 428 O GLU 107 40.636 16.582 51.175 1.00 3.00 O ATOM 429 N MET 108 38.562 17.286 50.759 1.00 3.00 N ATOM 430 CA MET 108 38.855 17.504 49.342 1.00 3.00 C ATOM 431 C MET 108 39.149 18.995 49.147 1.00 3.00 C ATOM 432 O MET 108 38.793 19.731 50.063 1.00 3.00 O ATOM 433 N GLU 109 39.803 19.357 48.063 1.00 3.00 N ATOM 434 CA GLU 109 40.238 20.713 47.797 1.00 3.00 C ATOM 435 C GLU 109 39.189 21.591 47.109 1.00 3.00 C ATOM 436 O GLU 109 39.180 21.638 45.858 1.00 3.00 O ATOM 437 N GLU 110 38.376 22.283 47.890 1.00 9.00 N ATOM 438 CA GLU 110 37.272 22.979 47.221 1.00 9.00 C ATOM 439 C GLU 110 37.800 23.990 46.215 1.00 9.00 C ATOM 440 O GLU 110 37.386 24.001 45.048 1.00 9.00 O ATOM 441 N ASP 111 38.749 24.811 46.624 1.00 9.00 N ATOM 442 CA ASP 111 39.082 26.060 45.908 1.00 9.00 C ATOM 443 C ASP 111 39.524 25.754 44.489 1.00 9.00 C ATOM 444 O ASP 111 38.998 26.291 43.514 1.00 9.00 O ATOM 445 N LYS 112 40.484 24.859 44.367 1.00 9.00 N ATOM 446 CA LYS 112 41.035 24.387 43.112 1.00 9.00 C ATOM 447 C LYS 112 39.959 23.760 42.224 1.00 9.00 C ATOM 448 O LYS 112 39.953 23.946 41.008 1.00 9.00 O ATOM 449 N TYR 113 39.045 23.006 42.853 1.00 3.00 N ATOM 450 CA TYR 113 37.925 22.440 42.095 1.00 3.00 C ATOM 451 C TYR 113 37.088 23.537 41.490 1.00 3.00 C ATOM 452 O TYR 113 36.639 23.580 40.336 1.00 3.00 O ATOM 453 N GLU 114 36.904 24.550 42.355 1.00 3.00 N ATOM 454 CA GLU 114 36.155 25.737 41.918 1.00 3.00 C ATOM 455 C GLU 114 36.897 26.443 40.800 1.00 3.00 C ATOM 456 O GLU 114 36.314 26.824 39.779 1.00 3.00 O ATOM 457 N PHE 115 38.225 26.468 40.822 1.00 3.00 N ATOM 458 CA PHE 115 38.991 27.080 39.738 1.00 3.00 C ATOM 459 C PHE 115 40.215 27.997 39.727 1.00 3.00 C ATOM 460 O PHE 115 40.746 28.319 40.785 1.00 3.00 O ATOM 461 N PRO 116 40.675 28.407 38.528 1.00 3.00 N ATOM 462 CA PRO 116 41.820 29.303 38.356 1.00 3.00 C ATOM 463 C PRO 116 41.796 30.581 39.191 1.00 3.00 C ATOM 464 O PRO 116 42.822 31.244 39.321 1.00 3.00 O ATOM 465 N GLU 117 40.645 30.913 39.761 1.00 3.00 N ATOM 466 CA GLU 117 40.534 32.095 40.613 1.00 3.00 C ATOM 467 C GLU 117 40.107 31.744 42.033 1.00 3.00 C ATOM 468 O GLU 117 39.580 32.590 42.778 1.00 3.00 O ATOM 469 N THR 118 40.341 30.478 42.382 1.00 3.00 N ATOM 470 CA THR 118 40.287 29.989 43.761 1.00 3.00 C ATOM 471 C THR 118 38.879 29.869 44.376 1.00 3.00 C ATOM 472 O THR 118 38.742 29.754 45.596 1.00 3.00 O ATOM 473 N VAL 119 37.841 29.889 43.539 1.00 3.00 N ATOM 474 CA VAL 119 36.478 29.622 44.002 1.00 3.00 C ATOM 475 C VAL 119 36.320 28.137 44.272 1.00 3.00 C ATOM 476 O VAL 119 36.719 27.322 43.454 1.00 3.00 O ATOM 477 N HIS 120 35.736 27.782 45.407 1.00 3.00 N ATOM 478 CA HIS 120 35.494 26.381 45.708 1.00 3.00 C ATOM 479 C HIS 120 34.342 25.879 44.857 1.00 3.00 C ATOM 480 O HIS 120 33.220 26.380 44.948 1.00 3.00 O ATOM 481 N ILE 121 34.636 24.890 44.021 1.00 3.00 N ATOM 482 CA ILE 121 33.640 24.328 43.113 1.00 3.00 C ATOM 483 C ILE 121 33.128 22.986 43.611 1.00 3.00 C ATOM 484 O ILE 121 31.943 22.685 43.480 1.00 3.00 O ATOM 485 N PRO 122 34.012 22.199 44.209 1.00 3.00 N ATOM 486 CA PRO 122 33.598 20.938 44.789 1.00 3.00 C ATOM 487 C PRO 122 34.378 20.604 46.059 1.00 3.00 C ATOM 488 O PRO 122 35.606 20.634 46.072 1.00 3.00 O ATOM 489 N ALA 123 33.634 20.320 47.127 1.00 3.00 N ATOM 490 CA ALA 123 34.182 19.889 48.413 1.00 3.00 C ATOM 491 C ALA 123 33.764 18.459 48.701 1.00 3.00 C ATOM 492 O ALA 123 32.622 18.073 48.451 1.00 3.00 O ATOM 493 N GLY 124 34.692 17.674 49.224 1.00 3.00 N ATOM 494 CA GLY 124 34.338 16.444 49.897 1.00 3.00 C ATOM 495 C GLY 124 34.900 16.550 51.312 1.00 3.00 C ATOM 496 O GLY 124 36.091 16.331 51.529 1.00 3.00 O ATOM 497 N SER 125 34.045 16.922 52.264 1.00 3.00 N ATOM 498 CA SER 125 34.480 17.156 53.640 1.00 3.00 C ATOM 499 C SER 125 35.023 15.882 54.281 1.00 3.00 C ATOM 500 O SER 125 35.987 15.920 55.049 1.00 3.00 O ATOM 501 N CYS 126 34.400 14.756 53.956 1.00 3.00 N ATOM 502 CA CYS 126 34.771 13.481 54.550 1.00 3.00 C ATOM 503 C CYS 126 34.895 12.193 53.760 1.00 3.00 C ATOM 504 O CYS 126 34.083 11.281 53.910 1.00 3.00 O ATOM 505 N VAL 127 35.906 12.109 52.902 1.00 3.00 N ATOM 506 CA VAL 127 36.186 10.882 52.163 1.00 3.00 C ATOM 507 C VAL 127 37.663 10.819 51.860 1.00 3.00 C ATOM 508 O VAL 127 38.328 11.857 51.804 1.00 3.00 O ATOM 509 N GLU 128 38.238 9.610 51.698 1.00 3.00 N ATOM 510 CA GLU 128 39.627 9.514 51.316 1.00 3.00 C ATOM 511 C GLU 128 39.833 8.486 50.225 1.00 3.00 C ATOM 512 O GLU 128 40.282 8.862 49.140 1.00 3.00 O ATOM 513 N LEU 129 39.502 7.207 50.442 1.00 3.00 N ATOM 514 CA LEU 129 39.805 6.201 49.425 1.00 3.00 C ATOM 515 C LEU 129 38.881 6.207 48.202 1.00 3.00 C ATOM 516 O LEU 129 39.222 5.630 47.178 1.00 3.00 O ATOM 517 N LEU 130 37.757 6.926 48.278 1.00 3.00 N ATOM 518 CA LEU 130 36.843 7.026 47.153 1.00 3.00 C ATOM 519 C LEU 130 37.320 8.022 46.083 1.00 3.00 C ATOM 520 O LEU 130 37.441 9.229 46.307 1.00 3.00 O ATOM 521 N ASN 131 37.597 7.458 44.910 1.00 3.00 N ATOM 522 CA ASN 131 38.014 8.232 43.756 1.00 3.00 C ATOM 523 C ASN 131 36.717 8.996 43.551 1.00 3.00 C ATOM 524 O ASN 131 35.693 8.676 44.159 1.00 3.00 O ATOM 525 N ILE 132 36.774 10.010 42.695 1.00 3.00 N ATOM 526 CA ILE 132 35.603 10.786 42.360 1.00 3.00 C ATOM 527 C ILE 132 35.852 11.606 41.100 1.00 3.00 C ATOM 528 O ILE 132 36.936 11.552 40.511 1.00 3.00 O ATOM 529 N ASP 133 34.842 12.365 40.691 1.00 3.00 N ATOM 530 CA ASP 133 34.920 13.136 39.466 1.00 3.00 C ATOM 531 C ASP 133 34.304 14.520 39.600 1.00 3.00 C ATOM 532 O ASP 133 33.559 14.787 40.547 1.00 3.00 O ATOM 533 N PHE 134 34.632 15.395 38.654 1.00 3.00 N ATOM 534 CA PHE 134 34.018 16.716 38.555 1.00 3.00 C ATOM 535 C PHE 134 33.636 16.996 37.107 1.00 3.00 C ATOM 536 O PHE 134 34.447 16.823 36.194 1.00 3.00 O ATOM 537 N ASN 135 32.394 17.415 36.896 1.00 3.00 N ATOM 538 CA ASN 135 31.965 17.776 35.556 1.00 3.00 C ATOM 539 C ASN 135 32.352 19.221 35.257 1.00 3.00 C ATOM 540 O ASN 135 32.046 20.124 36.024 1.00 3.00 O ATOM 541 N LEU 136 33.053 19.436 34.156 1.00 3.00 N ATOM 542 CA LEU 136 33.423 20.785 33.777 1.00 3.00 C ATOM 543 C LEU 136 32.263 21.414 33.018 1.00 3.00 C ATOM 544 O LEU 136 31.616 20.751 32.198 1.00 3.00 O ATOM 545 N GLN 137 31.990 22.683 33.313 1.00 3.00 N ATOM 546 CA GLN 137 30.879 23.395 32.699 1.00 3.00 C ATOM 547 C GLN 137 31.155 23.673 31.225 1.00 3.00 C ATOM 548 O GLN 137 32.311 23.779 30.822 1.00 3.00 O ATOM 549 N ASP 138 30.091 23.776 30.411 1.00 3.00 N ATOM 550 CA ASP 138 30.197 24.169 29.007 1.00 3.00 C ATOM 551 C ASP 138 30.960 25.476 28.813 1.00 3.00 C ATOM 552 O ASP 138 31.661 25.630 27.819 1.00 3.00 O ATOM 553 N ILE 139 30.809 26.407 29.751 1.00 3.00 N ATOM 554 CA ILE 139 31.541 27.668 29.709 1.00 3.00 C ATOM 555 C ILE 139 32.260 27.883 31.046 1.00 3.00 C ATOM 556 O ILE 139 31.788 28.647 31.889 1.00 3.00 O ATOM 557 N ASP 140 33.404 27.203 31.244 1.00 3.00 N ATOM 558 CA ASP 140 34.078 27.195 32.535 1.00 3.00 C ATOM 559 C ASP 140 35.135 28.289 32.646 1.00 3.00 C ATOM 560 O ASP 140 35.382 29.018 31.673 1.00 3.00 O ATOM 561 N MET 141 35.742 28.394 33.826 1.00 3.00 N ATOM 562 CA MET 141 36.895 29.257 34.039 1.00 3.00 C ATOM 563 C MET 141 38.158 28.609 33.470 1.00 3.00 C ATOM 564 O MET 141 38.623 27.579 33.971 1.00 3.00 O ATOM 565 N LEU 142 38.709 29.219 32.424 1.00 3.00 N ATOM 566 CA LEU 142 39.909 28.699 31.793 1.00 3.00 C ATOM 567 C LEU 142 41.159 29.016 32.613 1.00 3.00 C ATOM 568 O LEU 142 41.275 30.101 33.203 1.00 3.00 O ATOM 569 N GLU 143 42.080 28.056 32.650 1.00 3.00 N ATOM 570 CA GLU 143 43.328 28.208 33.375 1.00 3.00 C ATOM 571 C GLU 143 43.674 27.000 34.226 1.00 3.00 C ATOM 572 O GLU 143 43.340 25.859 33.888 1.00 3.00 O ATOM 573 N LYS 144 44.333 27.260 35.350 1.00 3.00 N ATOM 574 CA LYS 144 44.873 26.185 36.174 1.00 3.00 C ATOM 575 C LYS 144 44.001 25.948 37.405 1.00 3.00 C ATOM 576 O LYS 144 43.817 26.835 38.239 1.00 3.00 O ATOM 577 N TRP 145 43.465 24.740 37.496 1.00 3.00 N ATOM 578 CA TRP 145 42.623 24.333 38.606 1.00 3.00 C ATOM 579 C TRP 145 43.460 23.571 39.626 1.00 3.00 C ATOM 580 O TRP 145 44.509 23.035 39.297 1.00 3.00 O ATOM 581 N VAL 146 42.969 23.493 40.854 1.00 3.00 N ATOM 582 CA VAL 146 43.724 22.915 41.938 1.00 3.00 C ATOM 583 C VAL 146 42.905 21.867 42.686 1.00 3.00 C ATOM 584 O VAL 146 41.839 22.169 43.212 1.00 3.00 O ATOM 585 N LEU 147 43.386 20.628 42.692 1.00 3.00 N ATOM 586 CA LEU 147 42.840 19.589 43.556 1.00 3.00 C ATOM 587 C LEU 147 43.674 19.596 44.827 1.00 3.00 C ATOM 588 O LEU 147 44.894 19.422 44.779 1.00 3.00 O ATOM 589 N PRO 148 43.018 19.789 45.960 1.00 3.00 N ATOM 590 CA PRO 148 43.709 19.965 47.229 1.00 3.00 C ATOM 591 C PRO 148 43.241 18.935 48.256 1.00 3.00 C ATOM 592 O PRO 148 42.051 18.823 48.533 1.00 3.00 O ATOM 593 N LEU 149 44.183 18.179 48.810 1.00 3.00 N ATOM 594 CA LEU 149 43.862 17.142 49.792 1.00 3.00 C ATOM 595 C LEU 149 44.926 16.955 50.881 1.00 3.00 C ATOM 596 O LEU 149 46.087 16.639 50.623 1.00 3.00 O ATOM 597 N THR 150 44.553 17.215 52.119 1.00 3.00 N ATOM 598 CA THR 150 45.432 17.116 53.244 1.00 3.00 C ATOM 599 C THR 150 45.091 15.886 54.076 1.00 3.00 C ATOM 600 O THR 150 44.418 14.966 53.591 1.00 3.00 O ATOM 601 N ILE 151 45.622 15.817 55.298 1.00 3.00 N ATOM 602 CA ILE 151 45.188 14.805 56.242 1.00 3.00 C ATOM 603 C ILE 151 43.881 15.306 56.859 1.00 3.00 C ATOM 604 O ILE 151 43.593 16.509 56.809 1.00 3.00 O ATOM 605 N VAL 152 43.079 14.441 57.488 1.00 9.00 N ATOM 606 CA VAL 152 41.742 14.741 58.011 1.00 9.00 C ATOM 607 C VAL 152 41.390 16.055 58.723 1.00 9.00 C ATOM 608 O VAL 152 40.241 16.528 58.761 1.00 9.00 O ATOM 609 N ASP 153 42.476 16.540 59.331 1.00 3.00 N ATOM 610 CA ASP 153 42.551 17.780 60.091 1.00 3.00 C ATOM 611 C ASP 153 42.382 19.018 59.231 1.00 3.00 C ATOM 612 O ASP 153 41.864 20.014 59.719 1.00 3.00 O ATOM 613 N ASP 154 42.846 18.997 57.989 1.00 3.00 N ATOM 614 CA ASP 154 42.802 20.144 57.119 1.00 3.00 C ATOM 615 C ASP 154 44.217 20.637 56.825 1.00 3.00 C ATOM 616 O ASP 154 44.433 21.708 56.236 1.00 3.00 O ATOM 617 N GLY 155 45.215 19.822 57.193 1.00 3.00 N ATOM 618 CA GLY 155 46.613 20.178 57.050 1.00 3.00 C ATOM 619 C GLY 155 46.816 19.560 55.680 1.00 3.00 C ATOM 620 O GLY 155 46.551 18.375 55.469 1.00 3.00 O ATOM 621 N SER 156 47.286 20.380 54.746 1.00 3.00 N ATOM 622 CA SER 156 47.461 19.946 53.377 1.00 3.00 C ATOM 623 C SER 156 48.437 18.776 53.302 1.00 3.00 C ATOM 624 O SER 156 49.550 18.852 53.823 1.00 3.00 O ATOM 625 N TYR 157 47.990 17.695 52.667 1.00 3.00 N ATOM 626 CA TYR 157 48.806 16.512 52.455 1.00 3.00 C ATOM 627 C TYR 157 49.286 16.468 51.015 1.00 3.00 C ATOM 628 O TYR 157 50.448 16.154 50.761 1.00 3.00 O ATOM 629 N ALA 158 48.383 16.760 50.076 1.00 3.00 N ATOM 630 CA ALA 158 48.708 16.752 48.647 1.00 3.00 C ATOM 631 C ALA 158 47.930 17.801 47.888 1.00 3.00 C ATOM 632 O ALA 158 46.760 18.045 48.164 1.00 3.00 O ATOM 633 N TYR 159 48.594 18.382 46.899 1.00 3.00 N ATOM 634 CA TYR 159 47.986 19.306 45.969 1.00 3.00 C ATOM 635 C TYR 159 48.362 18.843 44.578 1.00 3.00 C ATOM 636 O TYR 159 49.462 18.335 44.370 1.00 3.00 O ATOM 637 N GLN 160 47.440 19.000 43.635 1.00 3.00 N ATOM 638 CA GLN 160 47.708 18.713 42.232 1.00 3.00 C ATOM 639 C GLN 160 46.885 19.668 41.374 1.00 3.00 C ATOM 640 O GLN 160 45.730 19.951 41.686 1.00 3.00 O ATOM 641 N SER 161 47.484 20.174 40.306 1.00 3.00 N ATOM 642 CA SER 161 46.755 21.027 39.388 1.00 3.00 C ATOM 643 C SER 161 46.374 20.283 38.113 1.00 3.00 C ATOM 644 O SER 161 46.880 19.191 37.841 1.00 3.00 O ATOM 645 N HIS 162 45.449 20.877 37.358 1.00 3.00 N ATOM 646 CA HIS 162 45.148 20.471 35.994 1.00 3.00 C ATOM 647 C HIS 162 44.677 21.697 35.240 1.00 3.00 C ATOM 648 O HIS 162 44.270 22.690 35.843 1.00 3.00 O ATOM 649 N PRO 163 44.756 21.639 33.919 1.00 3.00 N ATOM 650 CA PRO 163 44.364 22.764 33.106 1.00 3.00 C ATOM 651 C PRO 163 43.036 22.504 32.426 1.00 3.00 C ATOM 652 O PRO 163 42.690 21.359 32.121 1.00 3.00 O ATOM 653 N ARG 164 42.292 23.585 32.215 1.00 3.00 N ATOM 654 CA ARG 164 41.143 23.580 31.334 1.00 3.00 C ATOM 655 C ARG 164 41.449 24.608 30.255 1.00 3.00 C ATOM 656 O ARG 164 41.711 25.771 30.555 1.00 3.00 O ATOM 657 N LYS 165 41.446 24.163 29.002 1.00 3.00 N ATOM 658 CA LYS 165 41.809 25.019 27.873 1.00 3.00 C ATOM 659 C LYS 165 40.766 25.003 26.758 1.00 3.00 C ATOM 660 O LYS 165 40.001 24.051 26.619 1.00 3.00 O ATOM 661 N ASN 166 40.754 26.070 25.966 1.00 3.00 N ATOM 662 CA ASN 166 39.869 26.170 24.811 1.00 3.00 C ATOM 663 C ASN 166 40.507 25.620 23.546 1.00 3.00 C ATOM 664 O ASN 166 41.714 25.754 23.330 1.00 3.00 O ATOM 665 N TYR 167 39.673 25.016 22.704 1.00 3.00 N ATOM 666 CA TYR 167 40.114 24.462 21.425 1.00 3.00 C ATOM 667 C TYR 167 40.284 25.551 20.358 1.00 3.00 C ATOM 668 O TYR 167 40.828 25.287 19.284 1.00 3.00 O ATOM 669 N ALA 168 39.824 26.766 20.667 1.00 3.00 N ATOM 670 CA ALA 168 39.774 27.880 19.701 1.00 3.00 C ATOM 671 C ALA 168 41.171 28.307 19.183 1.00 3.00 C ATOM 672 O ALA 168 41.299 29.288 18.430 1.00 3.00 O ATOM 673 N LYS 169 42.202 27.552 19.582 1.00 3.00 N ATOM 674 CA LYS 169 43.535 27.639 18.976 1.00 3.00 C ATOM 675 C LYS 169 43.470 27.248 17.489 1.00 3.00 C ATOM 676 O LYS 169 43.859 26.130 17.123 1.00 3.00 O ATOM 677 N ALA 170 42.980 28.159 16.640 1.00 3.00 N ATOM 678 CA ALA 170 42.840 27.884 15.195 1.00 3.00 C ATOM 679 C ALA 170 44.195 27.735 14.483 1.00 3.00 C ATOM 680 O ALA 170 44.261 27.222 13.344 1.00 3.00 O ATOM 681 N LEU 171 45.272 28.176 15.151 1.00 3.00 N ATOM 682 CA LEU 171 46.624 27.941 14.630 1.00 3.00 C ATOM 683 C LEU 171 46.936 26.443 14.680 1.00 3.00 C ATOM 684 O LEU 171 46.432 25.729 15.549 1.00 3.00 O ATOM 685 N LEU 172 47.740 25.981 13.725 1.00 3.00 N ATOM 686 CA LEU 172 47.991 24.563 13.533 1.00 3.00 C ATOM 687 C LEU 172 49.478 24.272 13.670 1.00 3.00 C ATOM 688 O LEU 172 50.305 25.177 13.520 1.00 3.00 O ATOM 689 N LYS 173 49.830 23.022 13.960 1.00 3.00 N ATOM 690 CA LYS 173 51.248 22.659 14.036 1.00 3.00 C ATOM 691 C LYS 173 51.689 21.696 12.935 1.00 3.00 C ATOM 692 O LYS 173 50.959 20.778 12.563 1.00 3.00 O ATOM 693 N VAL 174 52.895 21.932 12.428 1.00 3.00 N ATOM 694 CA VAL 174 53.443 21.205 11.296 1.00 3.00 C ATOM 695 C VAL 174 54.533 20.260 11.784 1.00 3.00 C ATOM 696 O VAL 174 55.386 20.647 12.566 1.00 3.00 O ATOM 697 N VAL 175 54.484 19.018 11.323 1.00 3.00 N ATOM 698 CA VAL 175 55.508 18.026 11.637 1.00 3.00 C ATOM 699 C VAL 175 56.266 17.612 10.385 1.00 3.00 C ATOM 700 O VAL 175 55.681 17.422 9.323 1.00 3.00 O ATOM 701 N PRO 176 57.582 17.496 10.522 1.00 3.00 N ATOM 702 CA PRO 176 58.452 17.083 9.428 1.00 3.00 C ATOM 703 C PRO 176 59.452 16.039 9.916 1.00 3.00 C ATOM 704 O PRO 176 60.343 16.336 10.707 1.00 3.00 O ATOM 705 N PHE 177 59.299 14.812 9.442 1.00 3.00 N ATOM 706 CA PHE 177 60.225 13.741 9.798 1.00 3.00 C ATOM 707 C PHE 177 60.449 12.846 8.587 1.00 3.00 C ATOM 708 O PHE 177 59.568 12.739 7.732 1.00 3.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 572 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 81.46 40.6 276 98.2 281 ARMSMC SECONDARY STRUCTURE . . 64.65 52.7 131 97.0 135 ARMSMC SURFACE . . . . . . . . 89.32 36.0 178 98.3 181 ARMSMC BURIED . . . . . . . . 64.78 49.0 98 98.0 100 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 124 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 112 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 66 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 79 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 45 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 93 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 75 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 46 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 59 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 34 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 26 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 22 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 7 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 23 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 9 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 3 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 24.15 (Number of atoms: 143) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 24.15 143 100.0 143 CRMSCA CRN = ALL/NP . . . . . 0.1689 CRMSCA SECONDARY STRUCTURE . . 22.12 69 100.0 69 CRMSCA SURFACE . . . . . . . . 24.93 92 100.0 92 CRMSCA BURIED . . . . . . . . 22.66 51 100.0 51 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 24.10 572 80.7 709 CRMSMC SECONDARY STRUCTURE . . 22.14 276 80.0 345 CRMSMC SURFACE . . . . . . . . 24.87 368 80.7 456 CRMSMC BURIED . . . . . . . . 22.65 204 80.6 253 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 566 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 488 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 283 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 359 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 207 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 24.10 572 50.3 1138 CRMSALL SECONDARY STRUCTURE . . 22.14 276 49.4 559 CRMSALL SURFACE . . . . . . . . 24.87 368 50.6 727 CRMSALL BURIED . . . . . . . . 22.65 204 49.6 411 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.802 0.683 0.342 143 100.0 143 ERRCA SECONDARY STRUCTURE . . 16.697 0.650 0.326 69 100.0 69 ERRCA SURFACE . . . . . . . . 19.679 0.698 0.349 92 100.0 92 ERRCA BURIED . . . . . . . . 17.220 0.656 0.329 51 100.0 51 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.766 0.683 0.342 572 80.7 709 ERRMC SECONDARY STRUCTURE . . 16.735 0.652 0.327 276 80.0 345 ERRMC SURFACE . . . . . . . . 19.614 0.697 0.349 368 80.7 456 ERRMC BURIED . . . . . . . . 17.236 0.657 0.330 204 80.6 253 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 566 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 488 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 283 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 359 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 207 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.766 0.683 0.342 572 50.3 1138 ERRALL SECONDARY STRUCTURE . . 16.735 0.652 0.327 276 49.4 559 ERRALL SURFACE . . . . . . . . 19.614 0.697 0.349 368 50.6 727 ERRALL BURIED . . . . . . . . 17.236 0.657 0.330 204 49.6 411 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 3 17 143 143 DISTCA CA (P) 0.00 0.00 0.00 2.10 11.89 143 DISTCA CA (RMS) 0.00 0.00 0.00 4.46 6.77 DISTCA ALL (N) 0 1 1 11 70 572 1138 DISTALL ALL (P) 0.00 0.09 0.09 0.97 6.15 1138 DISTALL ALL (RMS) 0.00 1.83 1.83 4.34 6.85 DISTALL END of the results output