####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 362), selected 35 , name T0548TS407_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS407_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 12 - 32 4.84 7.86 LONGEST_CONTINUOUS_SEGMENT: 21 13 - 33 4.90 8.08 LCS_AVERAGE: 56.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 12 - 27 1.68 8.60 LCS_AVERAGE: 35.76 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 15 - 27 0.68 8.82 LCS_AVERAGE: 24.49 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 4 16 21 3 4 4 9 11 16 17 18 18 20 20 21 23 25 25 27 30 30 31 33 LCS_GDT F 13 F 13 5 16 21 3 5 11 13 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT H 14 H 14 8 16 21 3 4 11 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT Y 15 Y 15 13 16 21 3 7 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT T 16 T 16 13 16 21 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT V 17 V 17 13 16 21 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT T 18 T 18 13 16 21 4 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT D 19 D 19 13 16 21 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT I 20 I 20 13 16 21 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT K 21 K 21 13 16 21 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT D 22 D 22 13 16 21 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT L 23 L 23 13 16 21 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT T 24 T 24 13 16 21 4 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT K 25 K 25 13 16 21 9 12 13 14 15 16 17 18 18 20 20 22 23 26 27 28 30 30 31 33 LCS_GDT L 26 L 26 13 16 21 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT G 27 G 27 13 16 21 6 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT A 28 A 28 4 15 21 3 4 4 4 7 11 14 15 17 18 21 22 23 26 27 28 30 30 31 33 LCS_GDT I 29 I 29 4 5 21 2 4 4 4 7 11 13 15 17 18 21 22 23 26 27 28 30 30 31 33 LCS_GDT Y 30 Y 30 4 4 21 3 4 4 4 7 10 13 15 17 18 21 22 23 26 27 28 30 30 31 33 LCS_GDT D 31 D 31 4 5 21 3 4 4 4 5 5 7 9 12 15 18 19 21 26 27 28 30 30 31 33 LCS_GDT K 32 K 32 4 5 21 3 4 4 5 6 10 11 12 13 13 14 18 20 26 27 28 30 30 31 33 LCS_GDT T 33 T 33 4 5 21 3 4 4 5 6 10 11 12 13 13 14 15 19 24 27 28 30 30 31 33 LCS_GDT K 34 K 34 4 11 20 3 4 6 7 8 10 11 12 13 13 14 15 17 20 25 28 30 30 31 33 LCS_GDT K 35 K 35 4 11 17 3 4 4 9 10 10 11 12 13 13 14 18 22 26 27 28 30 30 31 33 LCS_GDT Y 36 Y 36 8 11 17 3 4 8 9 10 10 11 12 13 18 21 22 23 26 27 28 30 30 31 33 LCS_GDT W 37 W 37 8 11 17 3 7 8 9 10 10 16 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT V 38 V 38 8 11 17 3 7 8 9 10 10 11 12 13 13 13 14 16 23 25 28 30 30 31 33 LCS_GDT Y 39 Y 39 8 11 17 3 7 8 9 10 10 11 12 13 13 13 14 14 15 19 23 28 30 31 33 LCS_GDT Q 40 Q 40 8 11 17 3 7 8 9 10 10 11 12 13 13 13 14 14 16 19 23 26 27 31 33 LCS_GDT G 41 G 41 8 11 17 3 7 8 9 10 10 11 12 13 13 13 14 14 16 18 23 26 28 31 33 LCS_GDT K 42 K 42 8 11 17 3 7 8 9 10 10 11 14 17 20 20 21 23 25 25 28 30 30 31 33 LCS_GDT P 43 P 43 8 11 17 3 7 8 9 10 10 11 12 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT V 44 V 44 8 11 17 3 5 8 13 14 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 LCS_GDT M 45 M 45 5 11 17 3 5 7 8 10 10 11 14 17 18 18 19 21 26 27 28 29 30 31 31 LCS_GDT P 46 P 46 5 11 17 3 5 7 8 10 10 11 12 12 14 16 18 19 20 21 21 22 25 28 29 LCS_AVERAGE LCS_A: 38.75 ( 24.49 35.76 56.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 12 13 14 15 16 17 18 18 20 21 22 23 26 27 28 30 30 31 33 GDT PERCENT_AT 25.71 34.29 37.14 40.00 42.86 45.71 48.57 51.43 51.43 57.14 60.00 62.86 65.71 74.29 77.14 80.00 85.71 85.71 88.57 94.29 GDT RMS_LOCAL 0.32 0.49 0.68 1.02 1.28 1.55 1.86 2.07 2.07 2.86 3.73 3.68 3.85 5.03 5.23 5.40 5.78 5.74 5.92 6.69 GDT RMS_ALL_AT 9.15 9.12 8.82 8.74 8.62 8.56 8.59 8.53 8.53 8.34 7.90 7.94 7.86 7.83 7.82 7.81 7.36 7.51 7.42 7.27 # Checking swapping # possible swapping detected: D 31 D 31 # possible swapping detected: Y 36 Y 36 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 3.596 0 0.677 1.294 4.005 52.500 50.381 LGA F 13 F 13 1.296 0 0.165 0.795 4.208 81.786 65.195 LGA H 14 H 14 1.099 0 0.165 0.316 3.810 88.214 66.857 LGA Y 15 Y 15 2.070 0 0.394 0.383 4.570 65.238 53.135 LGA T 16 T 16 2.256 0 0.166 1.180 3.532 66.786 65.238 LGA V 17 V 17 2.479 0 0.235 1.261 5.628 70.952 60.000 LGA T 18 T 18 1.581 0 0.150 1.012 3.492 81.667 73.469 LGA D 19 D 19 1.202 0 0.047 0.351 1.807 81.429 77.143 LGA I 20 I 20 1.530 0 0.157 0.166 2.071 77.143 75.060 LGA K 21 K 21 1.339 0 0.019 0.661 4.181 85.952 68.783 LGA D 22 D 22 0.962 0 0.036 0.142 2.205 83.810 77.321 LGA L 23 L 23 1.464 0 0.355 0.445 4.564 88.214 65.238 LGA T 24 T 24 0.339 0 0.038 1.112 2.698 92.857 85.782 LGA K 25 K 25 1.004 0 0.201 0.585 2.610 81.548 76.931 LGA L 26 L 26 1.408 0 0.262 1.351 6.368 79.286 58.452 LGA G 27 G 27 1.456 0 0.155 0.155 4.038 63.095 63.095 LGA A 28 A 28 7.982 0 0.534 0.567 10.064 11.310 9.048 LGA I 29 I 29 9.314 0 0.329 1.241 12.332 1.310 1.310 LGA Y 30 Y 30 10.192 0 0.300 1.243 16.879 0.119 0.159 LGA D 31 D 31 15.250 0 0.153 0.694 20.721 0.000 0.000 LGA K 32 K 32 15.269 0 0.315 0.795 16.202 0.000 0.000 LGA T 33 T 33 15.208 0 0.222 0.575 16.682 0.000 0.000 LGA K 34 K 34 14.749 0 0.224 1.003 17.075 0.000 0.000 LGA K 35 K 35 11.569 0 0.306 0.626 18.731 1.310 0.582 LGA Y 36 Y 36 8.282 0 0.278 1.162 14.977 5.833 1.984 LGA W 37 W 37 4.157 0 0.103 1.063 5.321 34.405 49.966 LGA V 38 V 38 8.844 0 0.023 0.906 13.541 2.857 1.633 LGA Y 39 Y 39 11.068 0 0.208 0.293 21.112 0.357 0.119 LGA Q 40 Q 40 15.331 0 0.037 0.140 18.506 0.000 0.000 LGA G 41 G 41 15.100 0 0.247 0.247 15.100 0.000 0.000 LGA K 42 K 42 8.280 0 0.226 0.860 11.306 8.810 6.508 LGA P 43 P 43 6.885 0 0.203 0.217 10.982 21.548 12.721 LGA V 44 V 44 3.473 0 0.246 0.277 6.797 32.619 37.007 LGA M 45 M 45 10.566 0 0.109 0.711 16.895 1.786 0.893 LGA P 46 P 46 14.464 0 0.039 0.410 16.951 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 7.212 7.130 8.089 38.935 34.400 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 18 2.07 51.429 47.222 0.830 LGA_LOCAL RMSD: 2.069 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.534 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 7.212 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.203875 * X + 0.978937 * Y + 0.010788 * Z + -112.889450 Y_new = -0.549591 * X + 0.123564 * Y + -0.826246 * Z + 48.280087 Z_new = -0.810176 * X + 0.162522 * Y + 0.563207 * Z + 24.465965 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.215574 0.944452 0.280934 [DEG: -69.6473 54.1131 16.0963 ] ZXZ: 0.013056 0.972535 -1.372823 [DEG: 0.7480 55.7221 -78.6570 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS407_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS407_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 18 2.07 47.222 7.21 REMARK ---------------------------------------------------------- MOLECULE T0548TS407_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT N/A ATOM 106 N HIS 12 -41.708 -28.275 37.199 1.00 50.00 N ATOM 107 CA HIS 12 -40.248 -28.459 37.328 1.00 50.00 C ATOM 108 C HIS 12 -39.415 -27.906 36.149 1.00 50.00 C ATOM 109 O HIS 12 -38.201 -27.745 36.251 1.00 50.00 O ATOM 110 H HIS 12 -42.153 -27.774 37.800 1.00 50.00 H ATOM 111 CB HIS 12 -39.908 -29.942 37.491 1.00 50.00 C ATOM 112 CG HIS 12 -40.563 -30.585 38.673 1.00 50.00 C ATOM 113 ND1 HIS 12 -40.228 -30.273 39.972 1.00 50.00 N ATOM 114 CE1 HIS 12 -40.982 -31.008 40.808 1.00 50.00 C ATOM 115 CD2 HIS 12 -41.600 -31.589 38.867 1.00 50.00 C ATOM 116 HE2 HIS 12 -42.418 -32.393 40.525 1.00 50.00 H ATOM 117 NE2 HIS 12 -41.807 -31.800 40.152 1.00 50.00 N ATOM 118 N PHE 13 -40.094 -27.494 35.077 1.00 50.00 N ATOM 119 CA PHE 13 -39.753 -26.392 34.191 1.00 50.00 C ATOM 120 C PHE 13 -39.689 -25.070 34.961 1.00 50.00 C ATOM 121 O PHE 13 -40.713 -24.493 35.327 1.00 50.00 O ATOM 122 H PHE 13 -40.836 -27.981 34.926 1.00 50.00 H ATOM 123 CB PHE 13 -40.766 -26.288 33.049 1.00 50.00 C ATOM 124 CG PHE 13 -40.688 -27.420 32.064 1.00 50.00 C ATOM 125 CZ PHE 13 -40.548 -29.512 30.240 1.00 50.00 C ATOM 126 CD1 PHE 13 -39.509 -28.126 31.892 1.00 50.00 C ATOM 127 CE1 PHE 13 -39.436 -29.166 30.986 1.00 50.00 C ATOM 128 CD2 PHE 13 -41.790 -27.778 31.311 1.00 50.00 C ATOM 129 CE2 PHE 13 -41.718 -28.820 30.405 1.00 50.00 C ATOM 130 N HIS 14 -38.471 -24.582 35.189 1.00 50.00 N ATOM 131 CA HIS 14 -38.211 -23.245 35.727 1.00 50.00 C ATOM 132 C HIS 14 -38.521 -22.204 34.660 1.00 50.00 C ATOM 133 O HIS 14 -37.649 -21.776 33.910 1.00 50.00 O ATOM 134 H HIS 14 -37.783 -25.129 34.991 1.00 50.00 H ATOM 135 CB HIS 14 -36.761 -23.130 36.202 1.00 50.00 C ATOM 136 CG HIS 14 -36.470 -21.872 36.960 1.00 50.00 C ATOM 137 HD1 HIS 14 -36.615 -20.462 35.463 1.00 50.00 H ATOM 138 ND1 HIS 14 -36.453 -20.631 36.362 1.00 50.00 N ATOM 139 CE1 HIS 14 -36.165 -19.702 37.292 1.00 50.00 C ATOM 140 CD2 HIS 14 -36.157 -21.543 38.343 1.00 50.00 C ATOM 141 NE2 HIS 14 -35.986 -20.242 38.483 1.00 50.00 N ATOM 142 N TYR 15 -39.805 -21.896 34.538 1.00 50.00 N ATOM 143 CA TYR 15 -40.411 -20.961 33.601 1.00 50.00 C ATOM 144 C TYR 15 -40.036 -19.497 33.903 1.00 50.00 C ATOM 145 O TYR 15 -40.890 -18.665 34.195 1.00 50.00 O ATOM 146 H TYR 15 -40.321 -22.343 35.125 1.00 50.00 H ATOM 147 CB TYR 15 -41.934 -21.106 33.609 1.00 50.00 C ATOM 148 CG TYR 15 -42.426 -22.433 33.075 1.00 50.00 C ATOM 149 HH TYR 15 -43.113 -26.589 31.489 1.00 50.00 H ATOM 150 OH TYR 15 -43.763 -26.086 31.609 1.00 50.00 O ATOM 151 CZ TYR 15 -43.322 -24.876 32.094 1.00 50.00 C ATOM 152 CD1 TYR 15 -41.535 -23.459 32.788 1.00 50.00 C ATOM 153 CE1 TYR 15 -41.975 -24.674 32.301 1.00 50.00 C ATOM 154 CD2 TYR 15 -43.780 -22.654 32.861 1.00 50.00 C ATOM 155 CE2 TYR 15 -44.238 -23.864 32.374 1.00 50.00 C ATOM 156 N THR 16 -38.732 -19.199 33.925 1.00 50.00 N ATOM 157 CA THR 16 -38.161 -18.117 34.737 1.00 50.00 C ATOM 158 C THR 16 -38.833 -16.788 34.563 1.00 50.00 C ATOM 159 O THR 16 -39.044 -16.356 33.451 1.00 50.00 O ATOM 160 H THR 16 -38.196 -19.703 33.407 1.00 50.00 H ATOM 161 CB THR 16 -36.663 -17.920 34.442 1.00 50.00 C ATOM 162 HG1 THR 16 -35.148 -19.025 34.559 1.00 50.00 H ATOM 163 OG1 THR 16 -35.954 -19.134 34.719 1.00 50.00 O ATOM 164 CG2 THR 16 -36.090 -16.813 35.313 1.00 50.00 C ATOM 165 N VAL 17 -39.130 -16.072 35.642 1.00 50.00 N ATOM 166 CA VAL 17 -40.023 -14.901 35.602 1.00 50.00 C ATOM 167 C VAL 17 -39.465 -13.690 34.835 1.00 50.00 C ATOM 168 O VAL 17 -40.151 -12.683 34.674 1.00 50.00 O ATOM 169 H VAL 17 -38.760 -16.330 36.421 1.00 50.00 H ATOM 170 CB VAL 17 -40.395 -14.426 37.020 1.00 50.00 C ATOM 171 CG1 VAL 17 -41.112 -15.531 37.780 1.00 50.00 C ATOM 172 CG2 VAL 17 -39.153 -13.975 37.773 1.00 50.00 C ATOM 173 N THR 18 -38.251 -13.771 34.294 1.00 50.00 N ATOM 174 CA THR 18 -37.721 -12.791 33.331 1.00 50.00 C ATOM 175 C THR 18 -37.490 -13.354 31.953 1.00 50.00 C ATOM 176 O THR 18 -37.429 -12.584 31.015 1.00 50.00 O ATOM 177 H THR 18 -37.747 -14.472 34.547 1.00 50.00 H ATOM 178 CB THR 18 -36.393 -12.182 33.820 1.00 50.00 C ATOM 179 HG1 THR 18 -35.295 -13.595 33.244 1.00 50.00 H ATOM 180 OG1 THR 18 -35.417 -13.219 33.974 1.00 50.00 O ATOM 181 CG2 THR 18 -36.586 -11.492 35.162 1.00 50.00 C ATOM 182 N ASP 19 -37.560 -14.659 31.786 1.00 50.00 N ATOM 183 CA ASP 19 -37.900 -15.192 30.486 1.00 50.00 C ATOM 184 C ASP 19 -39.384 -14.954 30.189 1.00 50.00 C ATOM 185 O ASP 19 -39.699 -14.294 29.209 1.00 50.00 O ATOM 186 H ASP 19 -37.399 -15.218 32.473 1.00 50.00 H ATOM 187 CB ASP 19 -37.571 -16.685 30.415 1.00 50.00 C ATOM 188 CG ASP 19 -36.078 -16.950 30.377 1.00 50.00 C ATOM 189 OD1 ASP 19 -35.449 -16.653 29.339 1.00 50.00 O ATOM 190 OD2 ASP 19 -35.539 -17.454 31.384 1.00 50.00 O ATOM 191 N ILE 20 -40.278 -15.297 31.131 1.00 50.00 N ATOM 192 CA ILE 20 -41.611 -14.708 31.264 1.00 50.00 C ATOM 193 C ILE 20 -41.517 -13.245 30.928 1.00 50.00 C ATOM 194 O ILE 20 -42.066 -12.867 29.918 1.00 50.00 O ATOM 195 H ILE 20 -40.010 -15.936 31.705 1.00 50.00 H ATOM 196 CB ILE 20 -42.186 -14.923 32.676 1.00 50.00 C ATOM 197 CD1 ILE 20 -42.770 -16.747 34.359 1.00 50.00 C ATOM 198 CG1 ILE 20 -42.472 -16.407 32.914 1.00 50.00 C ATOM 199 CG2 ILE 20 -43.425 -14.066 32.884 1.00 50.00 C ATOM 200 N LYS 21 -40.896 -12.403 31.766 1.00 50.00 N ATOM 201 CA LYS 21 -41.135 -10.964 31.669 1.00 50.00 C ATOM 202 C LYS 21 -40.622 -10.384 30.371 1.00 50.00 C ATOM 203 O LYS 21 -41.308 -9.579 29.744 1.00 50.00 O ATOM 204 H LYS 21 -40.332 -12.724 32.389 1.00 50.00 H ATOM 205 CB LYS 21 -40.486 -10.232 32.846 1.00 50.00 C ATOM 206 CD LYS 21 -40.164 -8.090 34.111 1.00 50.00 C ATOM 207 CE LYS 21 -40.417 -6.590 34.126 1.00 50.00 C ATOM 208 CG LYS 21 -40.739 -8.734 32.861 1.00 50.00 C ATOM 209 HZ1 LYS 21 -40.024 -5.071 35.323 1.00 50.00 H ATOM 210 HZ2 LYS 21 -38.979 -6.079 35.377 1.00 50.00 H ATOM 211 HZ3 LYS 21 -40.237 -6.299 36.070 1.00 50.00 H ATOM 212 NZ LYS 21 -39.858 -5.945 35.346 1.00 50.00 N ATOM 213 N ASP 22 -39.452 -10.800 29.939 1.00 50.00 N ATOM 214 CA ASP 22 -38.892 -10.253 28.730 1.00 50.00 C ATOM 215 C ASP 22 -39.516 -10.722 27.468 1.00 50.00 C ATOM 216 O ASP 22 -39.590 -9.957 26.520 1.00 50.00 O ATOM 217 H ASP 22 -39.001 -11.427 30.400 1.00 50.00 H ATOM 218 CB ASP 22 -37.395 -10.555 28.648 1.00 50.00 C ATOM 219 CG ASP 22 -36.585 -9.766 29.658 1.00 50.00 C ATOM 220 OD1 ASP 22 -37.124 -8.790 30.219 1.00 50.00 O ATOM 221 OD2 ASP 22 -35.411 -10.125 29.888 1.00 50.00 O ATOM 222 N LEU 23 -40.182 -11.853 27.554 1.00 50.00 N ATOM 223 CA LEU 23 -41.018 -12.361 26.513 1.00 50.00 C ATOM 224 C LEU 23 -42.494 -12.208 26.921 1.00 50.00 C ATOM 225 O LEU 23 -43.341 -12.919 26.428 1.00 50.00 O ATOM 226 H LEU 23 -40.088 -12.313 28.322 1.00 50.00 H ATOM 227 CB LEU 23 -40.681 -13.825 26.221 1.00 50.00 C ATOM 228 CG LEU 23 -39.267 -14.104 25.707 1.00 50.00 C ATOM 229 CD1 LEU 23 -39.027 -15.601 25.581 1.00 50.00 C ATOM 230 CD2 LEU 23 -39.035 -13.416 24.370 1.00 50.00 C ATOM 231 N THR 24 -42.802 -11.210 27.779 1.00 50.00 N ATOM 232 CA THR 24 -44.095 -10.532 28.042 1.00 50.00 C ATOM 233 C THR 24 -44.060 -9.182 27.365 1.00 50.00 C ATOM 234 O THR 24 -45.045 -8.780 26.749 1.00 50.00 O ATOM 235 H THR 24 -42.064 -10.963 28.232 1.00 50.00 H ATOM 236 CB THR 24 -44.359 -10.388 29.552 1.00 50.00 C ATOM 237 HG1 THR 24 -43.688 -12.075 30.039 1.00 50.00 H ATOM 238 OG1 THR 24 -44.412 -11.686 30.157 1.00 50.00 O ATOM 239 CG2 THR 24 -45.686 -9.684 29.795 1.00 50.00 C ATOM 240 N LYS 25 -42.902 -8.515 27.413 1.00 50.00 N ATOM 241 CA LYS 25 -42.587 -7.468 26.463 1.00 50.00 C ATOM 242 C LYS 25 -42.624 -8.057 25.058 1.00 50.00 C ATOM 243 O LYS 25 -43.400 -7.645 24.202 1.00 50.00 O ATOM 244 H LYS 25 -42.311 -8.731 28.057 1.00 50.00 H ATOM 245 CB LYS 25 -41.220 -6.855 26.774 1.00 50.00 C ATOM 246 CD LYS 25 -39.487 -5.118 26.247 1.00 50.00 C ATOM 247 CE LYS 25 -39.075 -4.002 25.301 1.00 50.00 C ATOM 248 CG LYS 25 -40.822 -5.722 25.843 1.00 50.00 C ATOM 249 HZ1 LYS 25 -37.559 -2.754 25.112 1.00 50.00 H ATOM 250 HZ2 LYS 25 -37.137 -4.028 25.667 1.00 50.00 H ATOM 251 HZ3 LYS 25 -37.827 -3.062 26.506 1.00 50.00 H ATOM 252 NZ LYS 25 -37.768 -3.402 25.685 1.00 50.00 N ATOM 253 N LEU 26 -41.831 -9.113 24.849 1.00 50.00 N ATOM 254 CA LEU 26 -41.452 -9.576 23.520 1.00 50.00 C ATOM 255 C LEU 26 -42.332 -10.646 22.904 1.00 50.00 C ATOM 256 O LEU 26 -41.891 -11.498 22.145 1.00 50.00 O ATOM 257 H LEU 26 -41.528 -9.543 25.579 1.00 50.00 H ATOM 258 CB LEU 26 -40.021 -10.117 23.529 1.00 50.00 C ATOM 259 CG LEU 26 -38.920 -9.117 23.889 1.00 50.00 C ATOM 260 CD1 LEU 26 -37.568 -9.809 23.961 1.00 50.00 C ATOM 261 CD2 LEU 26 -38.879 -7.977 22.883 1.00 50.00 C ATOM 262 N GLY 27 -43.611 -10.476 23.130 1.00 50.00 N ATOM 263 CA GLY 27 -44.610 -10.806 22.118 1.00 50.00 C ATOM 264 C GLY 27 -45.332 -9.586 21.539 1.00 50.00 C ATOM 265 O GLY 27 -46.031 -9.777 20.540 1.00 50.00 O ATOM 266 H GLY 27 -43.870 -10.148 23.928 1.00 50.00 H ATOM 267 N ALA 28 -45.257 -8.411 22.143 1.00 50.00 N ATOM 268 CA ALA 28 -46.132 -7.241 21.976 1.00 50.00 C ATOM 269 C ALA 28 -47.650 -7.526 22.088 1.00 50.00 C ATOM 270 O ALA 28 -48.297 -7.020 22.988 1.00 50.00 O ATOM 271 H ALA 28 -44.565 -8.376 22.719 1.00 50.00 H ATOM 272 CB ALA 28 -45.883 -6.581 20.629 1.00 50.00 C ATOM 273 N ILE 29 -48.235 -8.345 21.208 1.00 50.00 N ATOM 274 CA ILE 29 -49.691 -8.515 21.092 1.00 50.00 C ATOM 275 C ILE 29 -50.337 -9.458 22.115 1.00 50.00 C ATOM 276 O ILE 29 -50.574 -10.635 21.845 1.00 50.00 O ATOM 277 H ILE 29 -47.684 -8.808 20.667 1.00 50.00 H ATOM 278 CB ILE 29 -50.091 -9.018 19.692 1.00 50.00 C ATOM 279 CD1 ILE 29 -49.799 -8.541 17.206 1.00 50.00 C ATOM 280 CG1 ILE 29 -49.637 -8.027 18.620 1.00 50.00 C ATOM 281 CG2 ILE 29 -51.589 -9.276 19.628 1.00 50.00 C ATOM 282 N TYR 30 -50.454 -8.922 23.322 1.00 50.00 N ATOM 283 CA TYR 30 -50.742 -9.459 24.665 1.00 50.00 C ATOM 284 C TYR 30 -49.767 -8.787 25.618 1.00 50.00 C ATOM 285 O TYR 30 -48.965 -9.437 26.272 1.00 50.00 O ATOM 286 H TYR 30 -50.314 -8.039 23.211 1.00 50.00 H ATOM 287 CB TYR 30 -50.611 -10.984 24.672 1.00 50.00 C ATOM 288 CG TYR 30 -51.645 -11.690 23.823 1.00 50.00 C ATOM 289 HH TYR 30 -54.183 -13.717 20.707 1.00 50.00 H ATOM 290 OH TYR 30 -54.476 -13.635 21.480 1.00 50.00 O ATOM 291 CZ TYR 30 -53.540 -12.991 22.257 1.00 50.00 C ATOM 292 CD1 TYR 30 -51.403 -11.955 22.482 1.00 50.00 C ATOM 293 CE1 TYR 30 -52.342 -12.601 21.700 1.00 50.00 C ATOM 294 CD2 TYR 30 -52.857 -12.091 24.368 1.00 50.00 C ATOM 295 CE2 TYR 30 -53.808 -12.739 23.602 1.00 50.00 C ATOM 296 N ASP 31 -49.722 -7.453 25.543 1.00 50.00 N ATOM 297 CA ASP 31 -48.688 -6.626 26.161 1.00 50.00 C ATOM 298 C ASP 31 -48.517 -7.031 27.627 1.00 50.00 C ATOM 299 O ASP 31 -49.484 -7.224 28.367 1.00 50.00 O ATOM 300 H ASP 31 -50.387 -7.067 25.074 1.00 50.00 H ATOM 301 CB ASP 31 -49.046 -5.144 26.041 1.00 50.00 C ATOM 302 CG ASP 31 -47.936 -4.235 26.535 1.00 50.00 C ATOM 303 OD1 ASP 31 -47.004 -3.957 25.751 1.00 50.00 O ATOM 304 OD2 ASP 31 -47.998 -3.802 27.704 1.00 50.00 O ATOM 305 N LYS 32 -47.268 -7.262 28.021 1.00 50.00 N ATOM 306 CA LYS 32 -46.882 -7.766 29.337 1.00 50.00 C ATOM 307 C LYS 32 -47.558 -9.070 29.826 1.00 50.00 C ATOM 308 O LYS 32 -47.354 -9.495 30.959 1.00 50.00 O ATOM 309 H LYS 32 -46.638 -7.083 27.404 1.00 50.00 H ATOM 310 CB LYS 32 -47.140 -6.708 30.412 1.00 50.00 C ATOM 311 CD LYS 32 -46.629 -4.433 31.339 1.00 50.00 C ATOM 312 CE LYS 32 -45.903 -3.117 31.107 1.00 50.00 C ATOM 313 CG LYS 32 -46.382 -5.408 30.200 1.00 50.00 C ATOM 314 HZ1 LYS 32 -45.747 -1.374 32.016 1.00 50.00 H ATOM 315 HZ2 LYS 32 -45.921 -2.459 32.967 1.00 50.00 H ATOM 316 HZ3 LYS 32 -47.061 -1.964 32.213 1.00 50.00 H ATOM 317 NZ LYS 32 -46.186 -2.129 32.184 1.00 50.00 N ATOM 318 N THR 33 -48.203 -9.802 28.931 1.00 50.00 N ATOM 319 CA THR 33 -48.757 -11.155 29.127 1.00 50.00 C ATOM 320 C THR 33 -48.407 -12.094 28.003 1.00 50.00 C ATOM 321 O THR 33 -49.009 -13.141 27.807 1.00 50.00 O ATOM 322 H THR 33 -48.289 -9.391 28.134 1.00 50.00 H ATOM 323 CB THR 33 -50.289 -11.122 29.276 1.00 50.00 C ATOM 324 HG1 THR 33 -50.587 -9.752 28.025 1.00 50.00 H ATOM 325 OG1 THR 33 -50.873 -10.525 28.111 1.00 50.00 O ATOM 326 CG2 THR 33 -50.688 -10.300 30.494 1.00 50.00 C ATOM 327 N LYS 34 -47.347 -11.744 27.274 1.00 50.00 N ATOM 328 CA LYS 34 -46.626 -12.684 26.421 1.00 50.00 C ATOM 329 C LYS 34 -46.029 -13.793 27.274 1.00 50.00 C ATOM 330 O LYS 34 -46.283 -14.949 26.986 1.00 50.00 O ATOM 331 H LYS 34 -47.079 -10.885 27.324 1.00 50.00 H ATOM 332 CB LYS 34 -45.536 -11.960 25.626 1.00 50.00 C ATOM 333 CD LYS 34 -46.736 -11.788 23.429 1.00 50.00 C ATOM 334 CE LYS 34 -45.716 -12.561 22.609 1.00 50.00 C ATOM 335 CG LYS 34 -46.069 -11.020 24.558 1.00 50.00 C ATOM 336 HZ1 LYS 34 -45.724 -13.710 21.004 1.00 50.00 H ATOM 337 HZ2 LYS 34 -46.743 -12.676 20.928 1.00 50.00 H ATOM 338 HZ3 LYS 34 -46.956 -13.844 21.765 1.00 50.00 H ATOM 339 NZ LYS 34 -46.348 -13.269 21.461 1.00 50.00 N ATOM 340 N LYS 35 -45.505 -13.418 28.449 1.00 50.00 N ATOM 341 CA LYS 35 -44.986 -14.304 29.493 1.00 50.00 C ATOM 342 C LYS 35 -44.287 -15.483 28.921 1.00 50.00 C ATOM 343 O LYS 35 -44.609 -16.585 29.344 1.00 50.00 O ATOM 344 H LYS 35 -45.489 -12.526 28.567 1.00 50.00 H ATOM 345 CB LYS 35 -46.118 -14.773 30.410 1.00 50.00 C ATOM 346 CD LYS 35 -47.925 -14.181 32.048 1.00 50.00 C ATOM 347 CE LYS 35 -48.590 -13.060 32.830 1.00 50.00 C ATOM 348 CG LYS 35 -46.849 -13.644 31.119 1.00 50.00 C ATOM 349 HZ1 LYS 35 -49.744 -11.510 32.433 1.00 50.00 H ATOM 350 HZ2 LYS 35 -50.006 -12.617 31.528 1.00 50.00 H ATOM 351 HZ3 LYS 35 -48.828 -11.787 31.341 1.00 50.00 H ATOM 352 NZ LYS 35 -49.371 -12.152 31.944 1.00 50.00 N ATOM 353 N TYR 36 -43.438 -15.219 27.917 1.00 50.00 N ATOM 354 CA TYR 36 -42.977 -16.263 27.050 1.00 50.00 C ATOM 355 C TYR 36 -42.039 -17.159 27.834 1.00 50.00 C ATOM 356 O TYR 36 -40.828 -16.946 27.836 1.00 50.00 O ATOM 357 H TYR 36 -43.158 -14.373 27.791 1.00 50.00 H ATOM 358 CB TYR 36 -42.288 -15.671 25.819 1.00 50.00 C ATOM 359 CG TYR 36 -43.224 -14.932 24.889 1.00 50.00 C ATOM 360 HH TYR 36 -46.553 -12.830 22.707 1.00 50.00 H ATOM 361 OH TYR 36 -45.811 -12.903 22.343 1.00 50.00 O ATOM 362 CZ TYR 36 -44.953 -13.574 23.185 1.00 50.00 C ATOM 363 CD1 TYR 36 -44.538 -14.676 25.259 1.00 50.00 C ATOM 364 CE1 TYR 36 -45.401 -14.002 24.416 1.00 50.00 C ATOM 365 CD2 TYR 36 -42.791 -14.495 23.644 1.00 50.00 C ATOM 366 CE2 TYR 36 -43.640 -13.819 22.788 1.00 50.00 C ATOM 367 N TRP 37 -42.613 -18.080 28.599 1.00 50.00 N ATOM 368 CA TRP 37 -41.864 -18.695 29.681 1.00 50.00 C ATOM 369 C TRP 37 -40.724 -19.468 29.048 1.00 50.00 C ATOM 370 O TRP 37 -40.980 -20.309 28.196 1.00 50.00 O ATOM 371 H TRP 37 -43.467 -18.322 28.447 1.00 50.00 H ATOM 372 CB TRP 37 -42.776 -19.591 30.521 1.00 50.00 C ATOM 373 HB2 TRP 37 -42.313 -19.887 31.399 1.00 50.00 H ATOM 374 HB3 TRP 37 -43.434 -20.144 30.011 1.00 50.00 H ATOM 375 CG TRP 37 -43.814 -18.835 31.294 1.00 50.00 C ATOM 376 CD1 TRP 37 -43.602 -18.010 32.360 1.00 50.00 C ATOM 377 HE1 TRP 37 -44.892 -16.904 33.527 1.00 50.00 H ATOM 378 NE1 TRP 37 -44.796 -17.495 32.805 1.00 50.00 N ATOM 379 CD2 TRP 37 -45.228 -18.835 31.059 1.00 50.00 C ATOM 380 CE2 TRP 37 -45.809 -17.989 32.020 1.00 50.00 C ATOM 381 CH2 TRP 37 -47.970 -18.391 31.160 1.00 50.00 C ATOM 382 CZ2 TRP 37 -47.182 -17.759 32.080 1.00 50.00 C ATOM 383 CE3 TRP 37 -46.058 -19.469 30.130 1.00 50.00 C ATOM 384 CZ3 TRP 37 -47.419 -19.238 30.193 1.00 50.00 C ATOM 385 N VAL 38 -39.482 -19.237 29.431 1.00 50.00 N ATOM 386 CA VAL 38 -38.412 -20.092 28.930 1.00 50.00 C ATOM 387 C VAL 38 -38.752 -21.556 29.216 1.00 50.00 C ATOM 388 O VAL 38 -39.196 -21.908 30.307 1.00 50.00 O ATOM 389 H VAL 38 -39.291 -18.561 29.995 1.00 50.00 H ATOM 390 CB VAL 38 -37.053 -19.719 29.551 1.00 50.00 C ATOM 391 CG1 VAL 38 -37.049 -20.019 31.043 1.00 50.00 C ATOM 392 CG2 VAL 38 -35.925 -20.462 28.852 1.00 50.00 C ATOM 393 N TYR 39 -38.372 -22.440 28.300 1.00 50.00 N ATOM 394 CA TYR 39 -37.854 -23.737 28.711 1.00 50.00 C ATOM 395 C TYR 39 -36.627 -24.108 27.881 1.00 50.00 C ATOM 396 O TYR 39 -36.730 -24.736 26.832 1.00 50.00 O ATOM 397 H TYR 39 -38.434 -22.236 27.426 1.00 50.00 H ATOM 398 CB TYR 39 -38.936 -24.811 28.578 1.00 50.00 C ATOM 399 CG TYR 39 -38.516 -26.169 29.094 1.00 50.00 C ATOM 400 HH TYR 39 -37.521 -30.476 29.956 1.00 50.00 H ATOM 401 OH TYR 39 -37.357 -29.898 30.526 1.00 50.00 O ATOM 402 CZ TYR 39 -37.741 -28.664 30.051 1.00 50.00 C ATOM 403 CD1 TYR 39 -37.949 -26.308 30.355 1.00 50.00 C ATOM 404 CE1 TYR 39 -37.563 -27.544 30.835 1.00 50.00 C ATOM 405 CD2 TYR 39 -38.688 -27.309 28.318 1.00 50.00 C ATOM 406 CE2 TYR 39 -38.307 -28.554 28.782 1.00 50.00 C ATOM 407 N GLN 40 -35.476 -23.627 28.359 1.00 50.00 N ATOM 408 CA GLN 40 -34.145 -23.684 27.745 1.00 50.00 C ATOM 409 C GLN 40 -33.808 -22.510 26.804 1.00 50.00 C ATOM 410 O GLN 40 -33.259 -22.700 25.718 1.00 50.00 O ATOM 411 H GLN 40 -35.586 -23.229 29.159 1.00 50.00 H ATOM 412 CB GLN 40 -33.974 -24.983 26.955 1.00 50.00 C ATOM 413 CD GLN 40 -33.850 -27.505 26.994 1.00 50.00 C ATOM 414 CG GLN 40 -34.048 -26.241 27.806 1.00 50.00 C ATOM 415 OE1 GLN 40 -34.142 -27.539 25.798 1.00 50.00 O ATOM 416 HE21 GLN 40 -33.215 -29.328 27.206 1.00 50.00 H ATOM 417 HE22 GLN 40 -33.152 -28.485 28.517 1.00 50.00 H ATOM 418 NE2 GLN 40 -33.352 -28.552 27.642 1.00 50.00 N ATOM 419 N GLY 41 -34.199 -21.287 27.189 1.00 50.00 N ATOM 420 CA GLY 41 -34.216 -20.118 26.294 1.00 50.00 C ATOM 421 C GLY 41 -35.180 -20.301 25.130 1.00 50.00 C ATOM 422 O GLY 41 -34.776 -20.239 23.966 1.00 50.00 O ATOM 423 H GLY 41 -34.460 -21.201 28.046 1.00 50.00 H ATOM 424 N LYS 42 -36.425 -20.650 25.474 1.00 50.00 N ATOM 425 CA LYS 42 -37.510 -21.038 24.571 1.00 50.00 C ATOM 426 C LYS 42 -38.828 -20.396 24.986 1.00 50.00 C ATOM 427 O LYS 42 -39.458 -20.909 25.900 1.00 50.00 O ATOM 428 H LYS 42 -36.565 -20.631 26.363 1.00 50.00 H ATOM 429 CB LYS 42 -37.658 -22.560 24.534 1.00 50.00 C ATOM 430 CD LYS 42 -36.631 -24.796 24.033 1.00 50.00 C ATOM 431 CE LYS 42 -35.412 -25.524 23.493 1.00 50.00 C ATOM 432 CG LYS 42 -36.438 -23.288 23.989 1.00 50.00 C ATOM 433 HZ1 LYS 42 -33.516 -25.736 23.998 1.00 50.00 H ATOM 434 HZ2 LYS 42 -34.367 -25.591 25.166 1.00 50.00 H ATOM 435 HZ3 LYS 42 -34.025 -24.426 24.367 1.00 50.00 H ATOM 436 NZ LYS 42 -34.209 -25.297 24.341 1.00 50.00 N ATOM 437 N PRO 43 -39.166 -19.255 24.381 1.00 50.00 N ATOM 438 CA PRO 43 -40.263 -18.391 24.812 1.00 50.00 C ATOM 439 C PRO 43 -41.656 -19.061 24.694 1.00 50.00 C ATOM 440 O PRO 43 -42.191 -19.154 23.597 1.00 50.00 O ATOM 441 CB PRO 43 -40.168 -17.181 23.882 1.00 50.00 C ATOM 442 CD PRO 43 -38.312 -18.580 23.310 1.00 50.00 C ATOM 443 CG PRO 43 -38.738 -17.146 23.458 1.00 50.00 C ATOM 444 N VAL 44 -42.336 -19.436 25.785 1.00 50.00 N ATOM 445 CA VAL 44 -43.765 -19.821 25.773 1.00 50.00 C ATOM 446 C VAL 44 -44.760 -18.691 25.844 1.00 50.00 C ATOM 447 O VAL 44 -45.282 -18.382 26.915 1.00 50.00 O ATOM 448 H VAL 44 -41.873 -19.445 26.558 1.00 50.00 H ATOM 449 CB VAL 44 -44.100 -20.784 26.927 1.00 50.00 C ATOM 450 CG1 VAL 44 -45.574 -21.158 26.898 1.00 50.00 C ATOM 451 CG2 VAL 44 -43.228 -22.029 26.852 1.00 50.00 C ATOM 452 N MET 45 -44.990 -18.096 24.680 1.00 50.00 N ATOM 453 CA MET 45 -46.208 -17.435 24.192 1.00 50.00 C ATOM 454 C MET 45 -47.520 -17.687 24.947 1.00 50.00 C ATOM 455 O MET 45 -47.773 -18.773 25.482 1.00 50.00 O ATOM 456 H MET 45 -44.259 -18.134 24.157 1.00 50.00 H ATOM 457 CB MET 45 -46.476 -17.815 22.735 1.00 50.00 C ATOM 458 SD MET 45 -47.418 -15.314 22.003 1.00 50.00 S ATOM 459 CE MET 45 -46.214 -15.220 20.681 1.00 50.00 C ATOM 460 CG MET 45 -47.664 -17.097 22.114 1.00 50.00 C ATOM 461 N PRO 46 -48.398 -16.668 24.982 1.00 50.00 N ATOM 462 CA PRO 46 -49.783 -16.858 25.314 1.00 50.00 C ATOM 463 C PRO 46 -50.541 -17.262 24.030 1.00 50.00 C ATOM 464 O PRO 46 -50.033 -17.121 22.912 1.00 50.00 O ATOM 465 CB PRO 46 -50.225 -15.498 25.856 1.00 50.00 C ATOM 466 CD PRO 46 -48.074 -15.127 24.875 1.00 50.00 C ATOM 467 CG PRO 46 -49.428 -14.507 25.074 1.00 50.00 C TER END ########################## # # # ACE results: # # # ########################## WARNING!!! Different chains are predicted. Only first chain will be considered. Number of atoms possible to evaluate: 0 ERROR! The set of atoms possible to evaluate is empty-> END of the results output