####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 362), selected 35 , name T0548TS276_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS276_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 30 15 - 44 4.90 6.77 LCS_AVERAGE: 84.24 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 19 - 32 1.94 9.00 LCS_AVERAGE: 33.31 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 21 - 27 0.90 10.81 LCS_AVERAGE: 15.27 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 4 4 22 4 4 4 4 4 5 5 5 6 6 7 8 9 10 11 11 11 12 13 14 LCS_GDT F 13 F 13 4 4 26 4 4 4 4 4 5 5 5 6 8 11 17 19 20 22 23 25 27 31 32 LCS_GDT H 14 H 14 4 4 26 4 4 4 4 4 5 5 5 6 7 12 13 17 20 22 24 28 30 31 32 LCS_GDT Y 15 Y 15 4 5 30 4 4 4 5 5 8 12 15 17 19 26 27 28 28 29 30 32 32 32 32 LCS_GDT T 16 T 16 3 5 30 3 3 3 4 5 6 10 15 17 19 21 22 23 27 29 30 32 32 32 32 LCS_GDT V 17 V 17 3 5 30 0 3 3 4 8 10 10 14 17 19 21 22 23 25 29 30 32 32 32 32 LCS_GDT T 18 T 18 3 5 30 0 3 3 5 8 10 13 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT D 19 D 19 3 14 30 4 5 7 10 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT I 20 I 20 6 14 30 3 4 6 10 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT K 21 K 21 7 14 30 5 5 8 10 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT D 22 D 22 7 14 30 5 5 8 10 14 14 15 16 17 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT L 23 L 23 7 14 30 5 5 8 10 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT T 24 T 24 7 14 30 5 5 8 10 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT K 25 K 25 7 14 30 5 5 8 10 14 14 15 16 17 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT L 26 L 26 7 14 30 4 5 8 10 14 14 15 16 17 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT G 27 G 27 7 14 30 4 5 8 10 14 14 15 16 17 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT A 28 A 28 5 14 30 3 4 7 10 14 14 15 16 17 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT I 29 I 29 5 14 30 3 5 8 9 12 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT Y 30 Y 30 5 14 30 3 3 6 8 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT D 31 D 31 5 14 30 3 5 7 9 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT K 32 K 32 4 14 30 3 3 4 9 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT T 33 T 33 4 11 30 3 3 6 8 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT K 34 K 34 4 13 30 3 4 6 8 10 13 14 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT K 35 K 35 6 13 30 4 8 10 11 12 13 14 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT Y 36 Y 36 6 13 30 4 8 10 11 12 13 14 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT W 37 W 37 6 13 30 4 8 10 11 12 13 14 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT V 38 V 38 6 13 30 3 8 10 11 12 13 14 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT Y 39 Y 39 6 13 30 3 8 10 11 12 13 13 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT Q 40 Q 40 6 13 30 3 6 6 10 12 13 13 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT G 41 G 41 6 13 30 4 8 10 11 12 13 14 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT K 42 K 42 6 13 30 4 8 10 11 12 13 14 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT P 43 P 43 6 13 30 4 8 10 11 12 13 14 16 18 23 26 27 28 28 29 30 32 32 32 32 LCS_GDT V 44 V 44 6 13 30 4 8 10 11 12 13 14 16 18 21 25 27 28 28 29 30 32 32 32 32 LCS_GDT M 45 M 45 6 13 29 3 6 8 11 12 13 14 16 18 19 22 23 25 28 29 30 32 32 32 32 LCS_GDT P 46 P 46 6 13 29 3 7 10 11 12 13 14 16 18 19 19 22 23 27 28 30 32 32 32 32 LCS_AVERAGE LCS_A: 44.27 ( 15.27 33.31 84.24 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 8 10 11 14 14 15 16 18 23 26 27 28 28 29 30 32 32 32 32 GDT PERCENT_AT 14.29 22.86 28.57 31.43 40.00 40.00 42.86 45.71 51.43 65.71 74.29 77.14 80.00 80.00 82.86 85.71 91.43 91.43 91.43 91.43 GDT RMS_LOCAL 0.32 0.64 0.86 0.99 1.89 1.89 2.02 2.40 2.94 4.05 4.29 4.37 4.46 4.46 4.65 4.86 5.24 5.24 5.24 5.24 GDT RMS_ALL_AT 10.81 9.79 10.13 10.19 8.74 8.74 8.66 8.55 9.40 7.01 6.85 6.88 6.84 6.84 6.90 6.84 6.90 6.90 6.90 6.90 # Checking swapping # possible swapping detected: F 13 F 13 # possible swapping detected: Y 30 Y 30 # possible swapping detected: D 31 D 31 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 14.334 0 0.563 1.355 19.234 0.000 0.000 LGA F 13 F 13 7.657 0 0.067 0.573 9.760 4.881 21.602 LGA H 14 H 14 8.244 0 0.638 0.889 13.249 6.667 2.667 LGA Y 15 Y 15 5.864 0 0.166 0.144 10.741 21.429 12.222 LGA T 16 T 16 7.227 0 0.495 1.388 10.868 14.405 8.844 LGA V 17 V 17 6.667 0 0.499 1.316 11.250 16.310 9.796 LGA T 18 T 18 5.096 0 0.547 1.125 7.935 33.690 27.075 LGA D 19 D 19 1.037 0 0.519 0.942 4.583 84.167 66.786 LGA I 20 I 20 2.508 0 0.120 0.675 4.705 57.619 48.214 LGA K 21 K 21 2.951 0 0.627 0.729 5.020 57.262 49.841 LGA D 22 D 22 2.683 0 0.092 0.111 4.770 63.214 51.250 LGA L 23 L 23 0.706 0 0.094 1.000 4.751 85.952 70.357 LGA T 24 T 24 1.405 0 0.098 1.098 3.105 79.286 74.490 LGA K 25 K 25 1.424 0 0.067 0.896 5.463 81.548 63.704 LGA L 26 L 26 1.082 0 0.641 0.643 4.079 68.214 78.214 LGA G 27 G 27 1.168 0 0.575 0.575 3.643 72.024 72.024 LGA A 28 A 28 2.572 0 0.658 0.716 4.169 62.976 57.810 LGA I 29 I 29 3.343 0 0.498 1.589 9.205 61.190 35.298 LGA Y 30 Y 30 2.084 0 0.253 1.364 10.200 59.881 26.746 LGA D 31 D 31 2.230 0 0.425 1.368 7.704 84.167 53.750 LGA K 32 K 32 1.942 0 0.521 1.319 4.481 61.905 56.878 LGA T 33 T 33 2.220 0 0.629 0.629 5.895 49.762 60.884 LGA K 34 K 34 8.806 0 0.183 0.549 18.105 5.357 2.381 LGA K 35 K 35 9.190 0 0.092 0.098 12.891 1.905 0.899 LGA Y 36 Y 36 9.542 0 0.119 1.176 16.345 3.333 1.111 LGA W 37 W 37 9.254 0 0.185 0.293 10.134 0.595 1.156 LGA V 38 V 38 10.008 0 0.126 0.185 10.500 0.476 0.544 LGA Y 39 Y 39 11.523 0 0.164 0.177 15.314 0.000 0.000 LGA Q 40 Q 40 11.780 0 0.316 0.394 11.780 0.000 0.000 LGA G 41 G 41 12.660 0 0.577 0.577 12.660 0.000 0.000 LGA K 42 K 42 13.412 0 0.083 0.371 18.095 0.000 0.000 LGA P 43 P 43 11.614 0 0.066 0.302 14.469 0.000 0.000 LGA V 44 V 44 13.884 0 0.160 0.160 14.582 0.000 0.000 LGA M 45 M 45 17.576 0 0.121 0.699 22.608 0.000 0.000 LGA P 46 P 46 17.755 0 0.070 0.068 20.692 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 6.721 6.596 7.830 32.520 27.273 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 16 2.40 46.429 45.695 0.640 LGA_LOCAL RMSD: 2.399 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.548 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 6.721 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.468080 * X + 0.756496 * Y + 0.456744 * Z + -63.543224 Y_new = -0.860665 * X + -0.507477 * Y + -0.041504 * Z + 23.675711 Z_new = 0.200390 * X + -0.412531 * Y + 0.888629 * Z + 14.607242 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.068913 -0.201756 -0.434626 [DEG: -118.5400 -11.5598 -24.9023 ] ZXZ: 1.480177 0.476448 2.689404 [DEG: 84.8079 27.2985 154.0915 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS276_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS276_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 16 2.40 45.695 6.72 REMARK ---------------------------------------------------------- MOLECULE T0548TS276_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT 3l2tA ATOM 106 N HIS 12 -36.398 -17.312 29.788 1.00 50.00 N ATOM 107 CA HIS 12 -36.795 -16.917 28.478 1.00 50.00 C ATOM 108 C HIS 12 -38.196 -17.489 28.637 1.00 50.00 C ATOM 109 O HIS 12 -39.189 -17.237 27.956 1.00 50.00 O ATOM 110 H HIS 12 -36.800 -18.011 30.189 1.00 50.00 H ATOM 111 CB HIS 12 -35.864 -17.526 27.429 1.00 50.00 C ATOM 112 CG HIS 12 -34.442 -17.074 27.548 1.00 50.00 C ATOM 113 HD1 HIS 12 -34.598 -15.104 26.959 1.00 50.00 H ATOM 114 ND1 HIS 12 -34.041 -15.788 27.252 1.00 50.00 N ATOM 115 CE1 HIS 12 -32.716 -15.685 27.454 1.00 50.00 C ATOM 116 CD2 HIS 12 -33.185 -17.693 27.945 1.00 50.00 C ATOM 117 NE2 HIS 12 -32.195 -16.824 27.869 1.00 50.00 N ATOM 118 N PHE 13 -38.403 -18.364 29.614 1.00 50.00 N ATOM 119 CA PHE 13 -39.662 -18.975 29.775 1.00 50.00 C ATOM 120 C PHE 13 -40.436 -18.029 30.702 1.00 50.00 C ATOM 121 O PHE 13 -40.019 -17.309 31.607 1.00 50.00 O ATOM 122 H PHE 13 -37.730 -18.567 30.176 1.00 50.00 H ATOM 123 CB PHE 13 -39.505 -20.388 30.340 1.00 50.00 C ATOM 124 CG PHE 13 -38.876 -21.358 29.380 1.00 50.00 C ATOM 125 CZ PHE 13 -37.717 -23.150 27.600 1.00 50.00 C ATOM 126 CD1 PHE 13 -37.760 -22.090 29.745 1.00 50.00 C ATOM 127 CE1 PHE 13 -37.181 -22.982 28.863 1.00 50.00 C ATOM 128 CD2 PHE 13 -39.400 -21.537 28.113 1.00 50.00 C ATOM 129 CE2 PHE 13 -38.822 -22.430 27.230 1.00 50.00 C ATOM 130 N HIS 14 -41.717 -17.954 30.533 1.00 50.00 N ATOM 131 CA HIS 14 -42.553 -17.068 31.267 1.00 50.00 C ATOM 132 C HIS 14 -43.476 -17.291 32.437 1.00 50.00 C ATOM 133 O HIS 14 -43.637 -16.563 33.416 1.00 50.00 O ATOM 134 H HIS 14 -42.074 -18.500 29.914 1.00 50.00 H ATOM 135 CB HIS 14 -43.550 -16.377 30.336 1.00 50.00 C ATOM 136 CG HIS 14 -44.417 -15.368 31.021 1.00 50.00 C ATOM 137 ND1 HIS 14 -45.678 -15.038 30.569 1.00 50.00 N ATOM 138 CE1 HIS 14 -46.207 -14.110 31.385 1.00 50.00 C ATOM 139 CD2 HIS 14 -44.290 -14.515 32.194 1.00 50.00 C ATOM 140 HE2 HIS 14 -45.536 -13.173 33.040 1.00 50.00 H ATOM 141 NE2 HIS 14 -45.379 -13.791 32.362 1.00 50.00 N ATOM 142 N TYR 15 -44.201 -18.400 32.410 1.00 50.00 N ATOM 143 CA TYR 15 -45.025 -18.768 33.523 1.00 50.00 C ATOM 144 C TYR 15 -44.097 -19.914 33.902 1.00 50.00 C ATOM 145 O TYR 15 -43.466 -20.654 33.150 1.00 50.00 O ATOM 146 H TYR 15 -44.170 -18.926 31.680 1.00 50.00 H ATOM 147 CB TYR 15 -46.448 -19.078 33.056 1.00 50.00 C ATOM 148 CG TYR 15 -47.196 -17.875 32.528 1.00 50.00 C ATOM 149 HH TYR 15 -49.975 -14.793 30.778 1.00 50.00 H ATOM 150 OH TYR 15 -49.239 -14.555 31.080 1.00 50.00 O ATOM 151 CZ TYR 15 -48.564 -15.654 31.558 1.00 50.00 C ATOM 152 CD1 TYR 15 -46.634 -16.605 32.589 1.00 50.00 C ATOM 153 CE1 TYR 15 -47.310 -15.500 32.109 1.00 50.00 C ATOM 154 CD2 TYR 15 -48.460 -18.012 31.970 1.00 50.00 C ATOM 155 CE2 TYR 15 -49.150 -16.917 31.484 1.00 50.00 C ATOM 156 N THR 16 -43.949 -20.148 35.207 1.00 50.00 N ATOM 157 CA THR 16 -43.213 -21.199 35.749 1.00 50.00 C ATOM 158 C THR 16 -41.954 -20.667 36.400 1.00 50.00 C ATOM 159 O THR 16 -41.614 -20.733 37.580 1.00 50.00 O ATOM 160 H THR 16 -44.368 -19.566 35.750 1.00 50.00 H ATOM 161 CB THR 16 -42.850 -22.245 34.678 1.00 50.00 C ATOM 162 HG1 THR 16 -44.497 -22.190 33.773 1.00 50.00 H ATOM 163 OG1 THR 16 -44.049 -22.796 34.120 1.00 50.00 O ATOM 164 CG2 THR 16 -42.035 -23.373 35.292 1.00 50.00 C ATOM 165 N VAL 17 -41.114 -20.053 35.595 1.00 50.00 N ATOM 166 CA VAL 17 -39.871 -19.512 36.088 1.00 50.00 C ATOM 167 C VAL 17 -39.288 -18.152 35.759 1.00 50.00 C ATOM 168 O VAL 17 -38.240 -17.934 35.153 1.00 50.00 O ATOM 169 H VAL 17 -41.325 -19.974 34.724 1.00 50.00 H ATOM 170 CB VAL 17 -38.681 -20.427 35.745 1.00 50.00 C ATOM 171 CG1 VAL 17 -38.788 -21.745 36.499 1.00 50.00 C ATOM 172 CG2 VAL 17 -38.612 -20.672 34.246 1.00 50.00 C ATOM 173 N THR 18 -39.952 -17.052 36.149 1.00 50.00 N ATOM 174 CA THR 18 -39.273 -15.827 35.653 1.00 50.00 C ATOM 175 C THR 18 -38.406 -15.177 34.570 1.00 50.00 C ATOM 176 O THR 18 -37.285 -14.679 34.663 1.00 50.00 O ATOM 177 H THR 18 -40.704 -16.982 36.639 1.00 50.00 H ATOM 178 CB THR 18 -38.274 -15.277 36.688 1.00 50.00 C ATOM 179 HG1 THR 18 -36.705 -15.946 37.480 1.00 50.00 H ATOM 180 OG1 THR 18 -37.242 -16.245 36.922 1.00 50.00 O ATOM 181 CG2 THR 18 -38.976 -14.988 38.006 1.00 50.00 C ATOM 182 N ASP 19 -38.962 -15.159 33.368 1.00 50.00 N ATOM 183 CA ASP 19 -38.339 -14.252 32.379 1.00 50.00 C ATOM 184 C ASP 19 -39.207 -13.693 31.276 1.00 50.00 C ATOM 185 O ASP 19 -39.306 -14.111 30.123 1.00 50.00 O ATOM 186 H ASP 19 -39.676 -15.656 33.135 1.00 50.00 H ATOM 187 CB ASP 19 -37.162 -14.942 31.686 1.00 50.00 C ATOM 188 CG ASP 19 -36.378 -14.001 30.793 1.00 50.00 C ATOM 189 OD1 ASP 19 -36.450 -12.774 31.015 1.00 50.00 O ATOM 190 OD2 ASP 19 -35.693 -14.490 29.871 1.00 50.00 O ATOM 191 N ILE 20 -39.953 -12.623 31.585 1.00 50.00 N ATOM 192 CA ILE 20 -40.571 -11.865 30.516 1.00 50.00 C ATOM 193 C ILE 20 -39.711 -10.955 29.654 1.00 50.00 C ATOM 194 O ILE 20 -39.431 -11.109 28.466 1.00 50.00 O ATOM 195 H ILE 20 -40.073 -12.373 32.441 1.00 50.00 H ATOM 196 CB ILE 20 -41.703 -10.966 31.044 1.00 50.00 C ATOM 197 CD1 ILE 20 -42.793 -12.900 32.297 1.00 50.00 C ATOM 198 CG1 ILE 20 -42.970 -11.790 31.285 1.00 50.00 C ATOM 199 CG2 ILE 20 -41.953 -9.808 30.090 1.00 50.00 C ATOM 200 N LYS 21 -39.179 -9.862 30.191 1.00 50.00 N ATOM 201 CA LYS 21 -38.500 -8.896 29.407 1.00 50.00 C ATOM 202 C LYS 21 -38.698 -9.650 28.092 1.00 50.00 C ATOM 203 O LYS 21 -38.307 -10.782 27.810 1.00 50.00 O ATOM 204 H LYS 21 -39.261 -9.744 31.080 1.00 50.00 H ATOM 205 CB LYS 21 -37.073 -8.696 29.922 1.00 50.00 C ATOM 206 CD LYS 21 -36.824 -6.261 29.372 1.00 50.00 C ATOM 207 CE LYS 21 -35.909 -5.205 28.771 1.00 50.00 C ATOM 208 CG LYS 21 -36.274 -7.660 29.149 1.00 50.00 C ATOM 209 HZ1 LYS 21 -35.293 -4.685 26.970 1.00 50.00 H ATOM 210 HZ2 LYS 21 -36.648 -5.210 26.941 1.00 50.00 H ATOM 211 HZ3 LYS 21 -35.519 -6.118 27.065 1.00 50.00 H ATOM 212 NZ LYS 21 -35.835 -5.316 27.287 1.00 50.00 N ATOM 213 N ASP 22 -39.374 -9.026 27.122 1.00 50.00 N ATOM 214 CA ASP 22 -39.428 -9.798 25.873 1.00 50.00 C ATOM 215 C ASP 22 -40.408 -10.949 25.910 1.00 50.00 C ATOM 216 O ASP 22 -41.298 -11.188 25.095 1.00 50.00 O ATOM 217 H ASP 22 -39.773 -8.221 27.171 1.00 50.00 H ATOM 218 CB ASP 22 -38.043 -10.346 25.522 1.00 50.00 C ATOM 219 CG ASP 22 -37.063 -9.253 25.142 1.00 50.00 C ATOM 220 OD1 ASP 22 -37.514 -8.124 24.858 1.00 50.00 O ATOM 221 OD2 ASP 22 -35.844 -9.526 25.129 1.00 50.00 O ATOM 222 N LEU 23 -40.322 -11.814 26.924 1.00 50.00 N ATOM 223 CA LEU 23 -41.150 -13.049 27.112 1.00 50.00 C ATOM 224 C LEU 23 -42.457 -12.490 27.663 1.00 50.00 C ATOM 225 O LEU 23 -43.598 -12.678 27.246 1.00 50.00 O ATOM 226 H LEU 23 -39.694 -11.598 27.531 1.00 50.00 H ATOM 227 CB LEU 23 -40.438 -14.036 28.040 1.00 50.00 C ATOM 228 CG LEU 23 -39.491 -15.034 27.371 1.00 50.00 C ATOM 229 CD1 LEU 23 -38.410 -14.305 26.586 1.00 50.00 C ATOM 230 CD2 LEU 23 -38.863 -15.955 28.405 1.00 50.00 C ATOM 231 N THR 24 -42.365 -11.702 28.726 1.00 50.00 N ATOM 232 CA THR 24 -43.853 -11.103 29.104 1.00 50.00 C ATOM 233 C THR 24 -44.082 -9.984 28.098 1.00 50.00 C ATOM 234 O THR 24 -45.115 -9.711 27.489 1.00 50.00 O ATOM 235 H THR 24 -41.649 -11.476 29.223 1.00 50.00 H ATOM 236 CB THR 24 -43.912 -10.616 30.563 1.00 50.00 C ATOM 237 HG1 THR 24 -43.680 -11.447 32.233 1.00 50.00 H ATOM 238 OG1 THR 24 -43.649 -11.713 31.447 1.00 50.00 O ATOM 239 CG2 THR 24 -45.289 -10.054 30.883 1.00 50.00 C ATOM 240 N LYS 25 -43.041 -9.204 27.839 1.00 50.00 N ATOM 241 CA LYS 25 -43.283 -8.169 26.806 1.00 50.00 C ATOM 242 C LYS 25 -43.194 -8.851 25.448 1.00 50.00 C ATOM 243 O LYS 25 -43.561 -8.409 24.361 1.00 50.00 O ATOM 244 H LYS 25 -42.235 -9.264 28.236 1.00 50.00 H ATOM 245 CB LYS 25 -42.272 -7.029 26.944 1.00 50.00 C ATOM 246 CD LYS 25 -41.391 -5.102 28.290 1.00 50.00 C ATOM 247 CE LYS 25 -41.536 -4.296 29.570 1.00 50.00 C ATOM 248 CG LYS 25 -42.422 -6.217 28.221 1.00 50.00 C ATOM 249 HZ1 LYS 25 -40.629 -2.765 30.423 1.00 50.00 H ATOM 250 HZ2 LYS 25 -40.605 -2.661 28.974 1.00 50.00 H ATOM 251 HZ3 LYS 25 -39.701 -3.574 29.652 1.00 50.00 H ATOM 252 NZ LYS 25 -40.515 -3.216 29.664 1.00 50.00 N ATOM 253 N LEU 26 -42.660 -10.066 25.404 1.00 50.00 N ATOM 254 CA LEU 26 -42.498 -10.851 24.195 1.00 50.00 C ATOM 255 C LEU 26 -43.797 -11.617 24.449 1.00 50.00 C ATOM 256 O LEU 26 -44.051 -12.410 25.354 1.00 50.00 O ATOM 257 H LEU 26 -42.390 -10.398 26.196 1.00 50.00 H ATOM 258 CB LEU 26 -41.167 -11.604 24.219 1.00 50.00 C ATOM 259 CG LEU 26 -40.872 -12.502 23.015 1.00 50.00 C ATOM 260 CD1 LEU 26 -40.769 -11.675 21.743 1.00 50.00 C ATOM 261 CD2 LEU 26 -39.595 -13.296 23.237 1.00 50.00 C ATOM 262 N GLY 27 -44.787 -11.414 23.593 1.00 50.00 N ATOM 263 CA GLY 27 -45.906 -12.292 23.569 1.00 50.00 C ATOM 264 C GLY 27 -46.429 -12.974 24.814 1.00 50.00 C ATOM 265 O GLY 27 -46.061 -12.811 25.976 1.00 50.00 O ATOM 266 H GLY 27 -44.750 -10.717 23.025 1.00 50.00 H ATOM 267 N ALA 28 -47.401 -13.854 24.646 1.00 50.00 N ATOM 268 CA ALA 28 -47.835 -14.665 25.746 1.00 50.00 C ATOM 269 C ALA 28 -47.339 -15.490 26.888 1.00 50.00 C ATOM 270 O ALA 28 -47.833 -15.529 28.013 1.00 50.00 O ATOM 271 H ALA 28 -47.790 -13.944 23.839 1.00 50.00 H ATOM 272 CB ALA 28 -48.708 -15.808 25.250 1.00 50.00 C ATOM 273 N ILE 29 -46.265 -16.271 26.715 1.00 50.00 N ATOM 274 CA ILE 29 -45.939 -17.206 27.755 1.00 50.00 C ATOM 275 C ILE 29 -47.143 -17.984 28.247 1.00 50.00 C ATOM 276 O ILE 29 -47.452 -18.257 29.405 1.00 50.00 O ATOM 277 H ILE 29 -45.753 -16.223 25.976 1.00 50.00 H ATOM 278 CB ILE 29 -45.275 -16.507 28.956 1.00 50.00 C ATOM 279 CD1 ILE 29 -42.962 -16.667 27.895 1.00 50.00 C ATOM 280 CG1 ILE 29 -44.012 -15.767 28.511 1.00 50.00 C ATOM 281 CG2 ILE 29 -44.984 -17.509 30.063 1.00 50.00 C ATOM 282 N TYR 30 -47.965 -18.424 27.300 1.00 50.00 N ATOM 283 CA TYR 30 -49.097 -19.230 27.615 1.00 50.00 C ATOM 284 C TYR 30 -49.063 -20.667 28.174 1.00 50.00 C ATOM 285 O TYR 30 -49.019 -21.699 27.507 1.00 50.00 O ATOM 286 H TYR 30 -47.795 -18.202 26.445 1.00 50.00 H ATOM 287 CB TYR 30 -49.991 -19.402 26.385 1.00 50.00 C ATOM 288 CG TYR 30 -51.258 -20.183 26.653 1.00 50.00 C ATOM 289 HH TYR 30 -55.266 -21.850 27.845 1.00 50.00 H ATOM 290 OH TYR 30 -54.747 -22.318 27.398 1.00 50.00 O ATOM 291 CZ TYR 30 -53.592 -21.613 27.150 1.00 50.00 C ATOM 292 CD1 TYR 30 -52.296 -19.624 27.386 1.00 50.00 C ATOM 293 CE1 TYR 30 -53.458 -20.331 27.636 1.00 50.00 C ATOM 294 CD2 TYR 30 -51.410 -21.477 26.170 1.00 50.00 C ATOM 295 CE2 TYR 30 -52.564 -22.198 26.410 1.00 50.00 C ATOM 296 N ASP 31 -49.079 -20.980 29.458 1.00 50.00 N ATOM 297 CA ASP 31 -48.858 -22.324 29.726 1.00 50.00 C ATOM 298 C ASP 31 -50.087 -22.158 30.627 1.00 50.00 C ATOM 299 O ASP 31 -50.626 -23.009 31.333 1.00 50.00 O ATOM 300 H ASP 31 -49.218 -20.403 30.135 1.00 50.00 H ATOM 301 CB ASP 31 -47.448 -22.534 30.280 1.00 50.00 C ATOM 302 CG ASP 31 -46.369 -22.222 29.262 1.00 50.00 C ATOM 303 OD1 ASP 31 -46.565 -22.544 28.072 1.00 50.00 O ATOM 304 OD2 ASP 31 -45.328 -21.656 29.655 1.00 50.00 O ATOM 305 N LYS 32 -50.648 -20.942 30.654 1.00 50.00 N ATOM 306 CA LYS 32 -51.809 -20.573 31.335 1.00 50.00 C ATOM 307 C LYS 32 -53.092 -21.314 31.700 1.00 50.00 C ATOM 308 O LYS 32 -54.243 -21.093 31.325 1.00 50.00 O ATOM 309 H LYS 32 -50.198 -20.332 30.169 1.00 50.00 H ATOM 310 CB LYS 32 -52.469 -19.372 30.657 1.00 50.00 C ATOM 311 CD LYS 32 -54.264 -17.617 30.692 1.00 50.00 C ATOM 312 CE LYS 32 -55.509 -17.108 31.401 1.00 50.00 C ATOM 313 CG LYS 32 -53.705 -18.854 31.375 1.00 50.00 C ATOM 314 HZ1 LYS 32 -56.795 -15.630 31.179 1.00 50.00 H ATOM 315 HZ2 LYS 32 -56.289 -16.095 29.898 1.00 50.00 H ATOM 316 HZ3 LYS 32 -55.462 -15.249 30.743 1.00 50.00 H ATOM 317 NZ LYS 32 -56.070 -15.899 30.739 1.00 50.00 N ATOM 318 N THR 33 -52.929 -22.331 32.538 1.00 50.00 N ATOM 319 CA THR 33 -54.126 -23.025 32.901 1.00 50.00 C ATOM 320 C THR 33 -54.607 -22.458 34.236 1.00 50.00 C ATOM 321 O THR 33 -53.924 -22.023 35.161 1.00 50.00 O ATOM 322 H THR 33 -52.137 -22.594 32.874 1.00 50.00 H ATOM 323 CB THR 33 -53.891 -24.543 32.993 1.00 50.00 C ATOM 324 HG1 THR 33 -52.769 -24.670 31.491 1.00 50.00 H ATOM 325 OG1 THR 33 -53.474 -25.044 31.717 1.00 50.00 O ATOM 326 CG2 THR 33 -55.172 -25.257 33.400 1.00 50.00 C ATOM 327 N LYS 34 -55.925 -22.425 34.438 1.00 50.00 N ATOM 328 CA LYS 34 -56.428 -22.121 35.707 1.00 50.00 C ATOM 329 C LYS 34 -56.032 -23.051 36.840 1.00 50.00 C ATOM 330 O LYS 34 -55.551 -22.738 37.928 1.00 50.00 O ATOM 331 H LYS 34 -56.490 -22.597 33.759 1.00 50.00 H ATOM 332 CB LYS 34 -57.957 -22.075 35.680 1.00 50.00 C ATOM 333 CD LYS 34 -60.106 -21.657 36.908 1.00 50.00 C ATOM 334 CE LYS 34 -60.742 -21.349 38.255 1.00 50.00 C ATOM 335 CG LYS 34 -58.591 -21.733 37.019 1.00 50.00 C ATOM 336 HZ1 LYS 34 -62.564 -21.090 38.965 1.00 50.00 H ATOM 337 HZ2 LYS 34 -62.547 -22.049 37.874 1.00 50.00 H ATOM 338 HZ3 LYS 34 -62.455 -20.627 37.592 1.00 50.00 H ATOM 339 NZ LYS 34 -62.226 -21.271 38.162 1.00 50.00 N ATOM 340 N LYS 35 -56.193 -24.341 36.720 1.00 50.00 N ATOM 341 CA LYS 35 -55.884 -25.149 37.786 1.00 50.00 C ATOM 342 C LYS 35 -54.375 -25.402 37.966 1.00 50.00 C ATOM 343 O LYS 35 -53.769 -25.746 38.980 1.00 50.00 O ATOM 344 H LYS 35 -56.501 -24.702 35.956 1.00 50.00 H ATOM 345 CB LYS 35 -56.588 -26.500 37.656 1.00 50.00 C ATOM 346 CD LYS 35 -58.734 -27.804 37.668 1.00 50.00 C ATOM 347 CE LYS 35 -60.244 -27.732 37.818 1.00 50.00 C ATOM 348 CG LYS 35 -58.101 -26.428 37.798 1.00 50.00 C ATOM 349 HZ1 LYS 35 -61.763 -28.991 37.757 1.00 50.00 H ATOM 350 HZ2 LYS 35 -60.566 -29.622 38.288 1.00 50.00 H ATOM 351 HZ3 LYS 35 -60.696 -29.396 36.857 1.00 50.00 H ATOM 352 NZ LYS 35 -60.882 -29.070 37.664 1.00 50.00 N ATOM 353 N TYR 36 -53.625 -25.224 36.876 1.00 50.00 N ATOM 354 CA TYR 36 -52.236 -25.430 37.170 1.00 50.00 C ATOM 355 C TYR 36 -51.579 -24.469 36.203 1.00 50.00 C ATOM 356 O TYR 36 -51.854 -24.279 35.019 1.00 50.00 O ATOM 357 H TYR 36 -53.881 -25.005 36.041 1.00 50.00 H ATOM 358 CB TYR 36 -51.860 -26.901 36.980 1.00 50.00 C ATOM 359 CG TYR 36 -52.618 -27.848 37.881 1.00 50.00 C ATOM 360 HH TYR 36 -55.422 -30.683 39.974 1.00 50.00 H ATOM 361 OH TYR 36 -54.716 -30.456 40.349 1.00 50.00 O ATOM 362 CZ TYR 36 -54.021 -29.593 39.533 1.00 50.00 C ATOM 363 CD1 TYR 36 -53.840 -28.379 37.488 1.00 50.00 C ATOM 364 CE1 TYR 36 -54.541 -29.246 38.305 1.00 50.00 C ATOM 365 CD2 TYR 36 -52.110 -28.209 39.123 1.00 50.00 C ATOM 366 CE2 TYR 36 -52.797 -29.074 39.953 1.00 50.00 C ATOM 367 N TRP 37 -50.573 -23.750 36.737 1.00 50.00 N ATOM 368 CA TRP 37 -49.706 -22.938 35.950 1.00 50.00 C ATOM 369 C TRP 37 -48.636 -23.799 35.300 1.00 50.00 C ATOM 370 O TRP 37 -47.703 -24.390 35.842 1.00 50.00 O ATOM 371 H TRP 37 -50.461 -23.796 37.628 1.00 50.00 H ATOM 372 CB TRP 37 -49.069 -21.845 36.811 1.00 50.00 C ATOM 373 HB2 TRP 37 -48.585 -21.138 36.229 1.00 50.00 H ATOM 374 HB3 TRP 37 -48.780 -22.125 37.726 1.00 50.00 H ATOM 375 CG TRP 37 -50.046 -20.817 37.293 1.00 50.00 C ATOM 376 CD1 TRP 37 -50.631 -20.757 38.524 1.00 50.00 C ATOM 377 HE1 TRP 37 -51.978 -19.434 39.349 1.00 50.00 H ATOM 378 NE1 TRP 37 -51.472 -19.672 38.598 1.00 50.00 N ATOM 379 CD2 TRP 37 -50.552 -19.699 36.553 1.00 50.00 C ATOM 380 CE2 TRP 37 -51.438 -19.007 37.398 1.00 50.00 C ATOM 381 CH2 TRP 37 -51.890 -17.408 35.720 1.00 50.00 C ATOM 382 CZ2 TRP 37 -52.114 -17.857 36.991 1.00 50.00 C ATOM 383 CE3 TRP 37 -50.342 -19.217 35.257 1.00 50.00 C ATOM 384 CZ3 TRP 37 -51.014 -18.078 34.858 1.00 50.00 C ATOM 385 N VAL 38 -48.733 -23.924 33.973 1.00 50.00 N ATOM 386 CA VAL 38 -48.015 -24.929 33.253 1.00 50.00 C ATOM 387 C VAL 38 -46.783 -24.478 32.508 1.00 50.00 C ATOM 388 O VAL 38 -46.366 -23.332 32.343 1.00 50.00 O ATOM 389 H VAL 38 -49.270 -23.352 33.532 1.00 50.00 H ATOM 390 CB VAL 38 -48.915 -25.639 32.225 1.00 50.00 C ATOM 391 CG1 VAL 38 -48.114 -26.658 31.429 1.00 50.00 C ATOM 392 CG2 VAL 38 -50.091 -26.308 32.920 1.00 50.00 C ATOM 393 N TYR 39 -46.069 -25.446 31.968 1.00 50.00 N ATOM 394 CA TYR 39 -45.022 -25.203 31.006 1.00 50.00 C ATOM 395 C TYR 39 -45.528 -25.719 29.642 1.00 50.00 C ATOM 396 O TYR 39 -46.598 -26.268 29.382 1.00 50.00 O ATOM 397 H TYR 39 -46.259 -26.288 32.223 1.00 50.00 H ATOM 398 CB TYR 39 -43.725 -25.891 31.440 1.00 50.00 C ATOM 399 CG TYR 39 -42.564 -25.657 30.501 1.00 50.00 C ATOM 400 HH TYR 39 -39.251 -25.672 27.451 1.00 50.00 H ATOM 401 OH TYR 39 -39.368 -25.000 27.924 1.00 50.00 O ATOM 402 CZ TYR 39 -40.426 -25.219 28.776 1.00 50.00 C ATOM 403 CD1 TYR 39 -41.868 -24.456 30.516 1.00 50.00 C ATOM 404 CE1 TYR 39 -40.805 -24.233 29.661 1.00 50.00 C ATOM 405 CD2 TYR 39 -42.168 -26.639 29.602 1.00 50.00 C ATOM 406 CE2 TYR 39 -41.107 -26.434 28.740 1.00 50.00 C ATOM 407 N GLN 40 -44.726 -25.566 28.597 1.00 50.00 N ATOM 408 CA GLN 40 -44.970 -26.204 27.406 1.00 50.00 C ATOM 409 C GLN 40 -44.974 -27.730 27.348 1.00 50.00 C ATOM 410 O GLN 40 -45.542 -28.464 26.541 1.00 50.00 O ATOM 411 H GLN 40 -44.008 -25.029 28.681 1.00 50.00 H ATOM 412 CB GLN 40 -43.960 -25.764 26.346 1.00 50.00 C ATOM 413 CD GLN 40 -43.079 -23.910 24.873 1.00 50.00 C ATOM 414 CG GLN 40 -44.121 -24.321 25.894 1.00 50.00 C ATOM 415 OE1 GLN 40 -41.958 -24.419 24.876 1.00 50.00 O ATOM 416 HE21 GLN 40 -42.867 -22.707 23.364 1.00 50.00 H ATOM 417 HE22 GLN 40 -44.278 -22.641 24.024 1.00 50.00 H ATOM 418 NE2 GLN 40 -43.447 -22.987 23.992 1.00 50.00 N ATOM 419 N GLY 41 -44.273 -28.345 28.292 1.00 50.00 N ATOM 420 CA GLY 41 -44.503 -29.680 28.717 1.00 50.00 C ATOM 421 C GLY 41 -45.398 -29.762 29.975 1.00 50.00 C ATOM 422 O GLY 41 -46.518 -29.288 30.154 1.00 50.00 O ATOM 423 H GLY 41 -43.615 -27.859 28.668 1.00 50.00 H ATOM 424 N LYS 42 -44.924 -30.424 31.015 1.00 50.00 N ATOM 425 CA LYS 42 -45.651 -30.753 32.124 1.00 50.00 C ATOM 426 C LYS 42 -46.057 -29.476 32.850 1.00 50.00 C ATOM 427 O LYS 42 -45.651 -28.331 32.650 1.00 50.00 O ATOM 428 H LYS 42 -44.057 -30.661 30.959 1.00 50.00 H ATOM 429 CB LYS 42 -44.845 -31.676 33.040 1.00 50.00 C ATOM 430 CD LYS 42 -45.652 -33.840 32.054 1.00 50.00 C ATOM 431 CE LYS 42 -45.241 -35.195 31.503 1.00 50.00 C ATOM 432 CG LYS 42 -44.438 -32.990 32.392 1.00 50.00 C ATOM 433 HZ1 LYS 42 -46.145 -36.798 30.788 1.00 50.00 H ATOM 434 HZ2 LYS 42 -46.880 -35.584 30.474 1.00 50.00 H ATOM 435 HZ3 LYS 42 -46.942 -36.146 31.813 1.00 50.00 H ATOM 436 NZ LYS 42 -46.420 -36.013 31.104 1.00 50.00 N ATOM 437 N PRO 43 -46.958 -29.595 33.820 1.00 50.00 N ATOM 438 CA PRO 43 -47.344 -28.481 34.586 1.00 50.00 C ATOM 439 C PRO 43 -46.394 -28.380 35.764 1.00 50.00 C ATOM 440 O PRO 43 -45.832 -29.291 36.369 1.00 50.00 O ATOM 441 CB PRO 43 -48.782 -28.800 35.004 1.00 50.00 C ATOM 442 CD PRO 43 -47.917 -30.807 34.029 1.00 50.00 C ATOM 443 CG PRO 43 -48.818 -30.287 35.114 1.00 50.00 C ATOM 444 N VAL 44 -46.127 -27.173 36.209 1.00 50.00 N ATOM 445 CA VAL 44 -45.504 -26.982 37.493 1.00 50.00 C ATOM 446 C VAL 44 -46.326 -26.665 38.739 1.00 50.00 C ATOM 447 O VAL 44 -47.001 -25.661 38.965 1.00 50.00 O ATOM 448 H VAL 44 -46.338 -26.460 35.702 1.00 50.00 H ATOM 449 CB VAL 44 -44.454 -25.857 37.450 1.00 50.00 C ATOM 450 CG1 VAL 44 -43.839 -25.649 38.825 1.00 50.00 C ATOM 451 CG2 VAL 44 -43.377 -26.173 36.423 1.00 50.00 C ATOM 452 N MET 45 -46.331 -27.567 39.709 1.00 50.00 N ATOM 453 CA MET 45 -46.968 -27.301 40.906 1.00 50.00 C ATOM 454 C MET 45 -46.299 -26.319 41.820 1.00 50.00 C ATOM 455 O MET 45 -45.102 -26.054 41.908 1.00 50.00 O ATOM 456 H MET 45 -45.917 -28.356 39.585 1.00 50.00 H ATOM 457 CB MET 45 -47.167 -28.591 41.704 1.00 50.00 C ATOM 458 SD MET 45 -48.411 -31.037 42.081 1.00 50.00 S ATOM 459 CE MET 45 -49.638 -31.903 41.102 1.00 50.00 C ATOM 460 CG MET 45 -48.152 -29.564 41.076 1.00 50.00 C ATOM 461 N PRO 46 -47.115 -25.665 42.624 1.00 50.00 N ATOM 462 CA PRO 46 -46.539 -24.761 43.562 1.00 50.00 C ATOM 463 C PRO 46 -45.623 -25.478 44.542 1.00 50.00 C ATOM 464 O PRO 46 -45.571 -26.678 44.807 1.00 50.00 O ATOM 465 CB PRO 46 -47.746 -24.150 44.277 1.00 50.00 C ATOM 466 CD PRO 46 -48.618 -25.650 42.628 1.00 50.00 C ATOM 467 CG PRO 46 -48.881 -24.346 43.328 1.00 50.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 296 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 85.00 41.2 68 100.0 68 ARMSMC SECONDARY STRUCTURE . . 75.78 41.2 34 100.0 34 ARMSMC SURFACE . . . . . . . . 90.60 35.7 56 100.0 56 ARMSMC BURIED . . . . . . . . 51.31 66.7 12 100.0 12 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 71.01 53.1 32 100.0 32 ARMSSC1 RELIABLE SIDE CHAINS . 70.37 51.7 29 100.0 29 ARMSSC1 SECONDARY STRUCTURE . . 75.37 52.9 17 100.0 17 ARMSSC1 SURFACE . . . . . . . . 77.20 44.4 27 100.0 27 ARMSSC1 BURIED . . . . . . . . 9.72 100.0 5 100.0 5 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 61.81 52.0 25 100.0 25 ARMSSC2 RELIABLE SIDE CHAINS . 55.50 57.1 21 100.0 21 ARMSSC2 SECONDARY STRUCTURE . . 66.87 61.5 13 100.0 13 ARMSSC2 SURFACE . . . . . . . . 61.40 50.0 22 100.0 22 ARMSSC2 BURIED . . . . . . . . 64.74 66.7 3 100.0 3 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 59.53 75.0 8 100.0 8 ARMSSC3 RELIABLE SIDE CHAINS . 63.41 71.4 7 100.0 7 ARMSSC3 SECONDARY STRUCTURE . . 81.58 50.0 2 100.0 2 ARMSSC3 SURFACE . . . . . . . . 59.53 75.0 8 100.0 8 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 6.29 100.0 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 6.29 100.0 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 8.70 100.0 2 100.0 2 ARMSSC4 SURFACE . . . . . . . . 6.29 100.0 6 100.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 6.72 (Number of atoms: 35) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 6.72 35 100.0 35 CRMSCA CRN = ALL/NP . . . . . 0.1920 CRMSCA SECONDARY STRUCTURE . . 4.83 17 100.0 17 CRMSCA SURFACE . . . . . . . . 6.99 29 100.0 29 CRMSCA BURIED . . . . . . . . 5.20 6 100.0 6 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 6.79 173 100.0 173 CRMSMC SECONDARY STRUCTURE . . 4.89 85 100.0 85 CRMSMC SURFACE . . . . . . . . 7.06 143 100.0 143 CRMSMC BURIED . . . . . . . . 5.35 30 100.0 30 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 8.81 156 100.0 156 CRMSSC RELIABLE SIDE CHAINS . 7.94 136 100.0 136 CRMSSC SECONDARY STRUCTURE . . 7.04 84 100.0 84 CRMSSC SURFACE . . . . . . . . 9.24 127 100.0 127 CRMSSC BURIED . . . . . . . . 6.64 29 100.0 29 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 7.84 296 100.0 296 CRMSALL SECONDARY STRUCTURE . . 6.09 152 100.0 152 CRMSALL SURFACE . . . . . . . . 8.18 243 100.0 243 CRMSALL BURIED . . . . . . . . 6.08 53 100.0 53 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 44.126 0.795 0.817 35 100.0 35 ERRCA SECONDARY STRUCTURE . . 45.399 0.833 0.847 17 100.0 17 ERRCA SURFACE . . . . . . . . 43.967 0.791 0.814 29 100.0 29 ERRCA BURIED . . . . . . . . 44.896 0.815 0.831 6 100.0 6 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 44.085 0.794 0.817 173 100.0 173 ERRMC SECONDARY STRUCTURE . . 45.372 0.832 0.846 85 100.0 85 ERRMC SURFACE . . . . . . . . 43.929 0.790 0.814 143 100.0 143 ERRMC BURIED . . . . . . . . 44.829 0.814 0.830 30 100.0 30 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 42.177 0.737 0.772 156 100.0 156 ERRSC RELIABLE SIDE CHAINS . 42.704 0.750 0.781 136 100.0 136 ERRSC SECONDARY STRUCTURE . . 43.299 0.766 0.792 84 100.0 84 ERRSC SURFACE . . . . . . . . 41.871 0.729 0.766 127 100.0 127 ERRSC BURIED . . . . . . . . 43.518 0.772 0.796 29 100.0 29 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 43.165 0.767 0.795 296 100.0 296 ERRALL SECONDARY STRUCTURE . . 44.315 0.799 0.819 152 100.0 152 ERRALL SURFACE . . . . . . . . 42.954 0.761 0.791 243 100.0 243 ERRALL BURIED . . . . . . . . 44.132 0.791 0.812 53 100.0 53 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 18 31 35 35 DISTCA CA (P) 0.00 0.00 2.86 51.43 88.57 35 DISTCA CA (RMS) 0.00 0.00 2.29 4.02 5.18 DISTCA ALL (N) 0 3 21 111 245 296 296 DISTALL ALL (P) 0.00 1.01 7.09 37.50 82.77 296 DISTALL ALL (RMS) 0.00 1.58 2.49 3.89 5.78 DISTALL END of the results output