####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 338), selected 35 , name T0548TS248_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS248_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 13 - 35 4.83 10.78 LCS_AVERAGE: 60.08 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 35 - 45 1.95 16.43 LCS_AVERAGE: 22.45 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.45 19.74 LCS_AVERAGE: 14.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 3 3 20 0 3 3 3 3 3 6 8 9 10 12 12 13 16 16 23 23 23 24 27 LCS_GDT F 13 F 13 3 4 23 3 3 3 4 5 7 8 11 13 15 17 18 20 21 22 23 24 25 28 30 LCS_GDT H 14 H 14 3 4 23 3 3 4 6 8 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT Y 15 Y 15 3 5 23 3 3 4 6 8 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT T 16 T 16 4 5 23 3 3 5 6 7 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT V 17 V 17 4 5 23 3 3 4 4 4 8 8 10 13 14 16 19 20 21 22 23 24 27 28 30 LCS_GDT T 18 T 18 4 5 23 3 3 4 4 6 8 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT D 19 D 19 4 9 23 3 3 4 4 5 8 9 11 15 16 17 19 20 21 22 23 24 25 26 29 LCS_GDT I 20 I 20 8 9 23 4 8 8 8 8 8 9 10 10 16 17 19 20 21 22 23 24 25 26 30 LCS_GDT K 21 K 21 8 9 23 7 8 8 8 8 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT D 22 D 22 8 9 23 7 8 8 8 8 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT L 23 L 23 8 9 23 7 8 8 8 8 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT T 24 T 24 8 9 23 7 8 8 8 8 8 9 10 13 15 16 19 20 21 22 23 24 27 28 30 LCS_GDT K 25 K 25 8 9 23 7 8 8 8 8 8 9 10 12 14 16 19 20 21 22 23 24 27 28 30 LCS_GDT L 26 L 26 8 9 23 7 8 8 8 8 8 9 10 13 15 16 19 20 21 22 23 24 27 28 30 LCS_GDT G 27 G 27 8 9 23 7 8 8 8 8 8 9 10 11 12 16 16 20 21 22 23 24 27 28 30 LCS_GDT A 28 A 28 3 4 23 3 3 3 4 5 6 9 10 13 14 16 19 20 21 22 23 24 27 28 30 LCS_GDT I 29 I 29 3 4 23 2 3 5 6 7 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT Y 30 Y 30 3 3 23 3 3 3 4 4 8 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT D 31 D 31 5 5 23 5 5 5 6 8 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT K 32 K 32 5 5 23 5 5 5 6 8 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT T 33 T 33 5 7 23 5 5 5 5 6 8 9 11 15 16 17 18 20 21 22 23 24 24 24 25 LCS_GDT K 34 K 34 6 8 23 5 5 6 6 8 10 11 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT K 35 K 35 6 11 23 5 5 6 7 10 11 12 13 15 16 17 19 20 21 22 23 24 27 28 30 LCS_GDT Y 36 Y 36 6 11 17 3 5 6 8 10 11 12 12 12 12 13 16 18 19 22 23 24 27 28 30 LCS_GDT W 37 W 37 6 11 17 3 5 6 8 10 11 12 12 12 12 13 14 15 16 16 19 23 27 28 30 LCS_GDT V 38 V 38 6 11 17 3 4 6 8 10 11 12 12 12 12 13 14 15 16 16 19 21 27 28 30 LCS_GDT Y 39 Y 39 6 11 17 3 5 6 8 10 11 12 12 12 12 13 14 15 16 16 16 18 20 22 24 LCS_GDT Q 40 Q 40 4 11 17 3 3 5 8 10 11 12 12 12 12 13 14 15 16 16 16 18 21 22 24 LCS_GDT G 41 G 41 4 11 17 3 3 5 8 10 11 12 12 12 12 13 14 15 16 16 17 19 21 27 30 LCS_GDT K 42 K 42 4 11 17 3 4 5 6 10 11 12 12 12 12 13 14 15 16 16 21 23 27 28 30 LCS_GDT P 43 P 43 4 11 17 3 4 5 8 10 11 12 12 12 12 13 14 15 16 20 22 24 27 28 30 LCS_GDT V 44 V 44 4 11 17 3 4 5 6 10 11 12 12 12 12 13 14 15 16 20 22 24 27 28 30 LCS_GDT M 45 M 45 4 11 17 3 4 5 8 10 11 12 12 12 12 13 14 15 16 17 19 24 27 28 30 LCS_GDT P 46 P 46 4 6 17 0 3 5 6 8 8 12 12 12 12 12 14 15 16 17 19 24 27 28 30 LCS_AVERAGE LCS_A: 32.41 ( 14.69 22.45 60.08 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 8 8 8 10 11 12 13 15 16 17 19 20 21 22 23 24 27 28 30 GDT PERCENT_AT 20.00 22.86 22.86 22.86 28.57 31.43 34.29 37.14 42.86 45.71 48.57 54.29 57.14 60.00 62.86 65.71 68.57 77.14 80.00 85.71 GDT RMS_LOCAL 0.34 0.45 0.45 0.45 1.79 1.95 2.32 2.84 3.14 3.32 3.52 4.17 4.27 4.44 4.64 4.83 5.14 6.91 7.03 7.35 GDT RMS_ALL_AT 19.49 19.74 19.74 19.74 16.38 16.43 15.30 11.05 11.59 11.69 11.60 10.63 11.20 11.06 10.88 10.78 10.46 8.69 8.57 8.44 # Checking swapping # possible swapping detected: Y 15 Y 15 # possible swapping detected: D 19 D 19 # possible swapping detected: D 22 D 22 # possible swapping detected: Y 30 Y 30 # possible swapping detected: D 31 D 31 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 12.167 0 0.583 0.928 13.138 0.000 0.762 LGA F 13 F 13 6.875 0 0.583 0.723 13.919 18.929 8.225 LGA H 14 H 14 2.728 0 0.350 1.002 6.067 48.690 38.857 LGA Y 15 Y 15 3.162 0 0.583 1.465 14.674 53.810 21.905 LGA T 16 T 16 2.549 0 0.627 0.609 5.551 47.143 47.755 LGA V 17 V 17 7.747 0 0.032 1.275 11.420 11.667 6.803 LGA T 18 T 18 4.064 0 0.589 0.533 7.335 47.619 38.435 LGA D 19 D 19 4.727 0 0.037 1.089 7.066 32.976 22.738 LGA I 20 I 20 5.901 0 0.614 0.936 11.667 33.571 18.452 LGA K 21 K 21 0.817 0 0.051 1.080 4.327 69.524 59.101 LGA D 22 D 22 3.372 0 0.081 1.100 8.509 57.381 36.310 LGA L 23 L 23 1.496 0 0.031 0.321 6.706 66.310 48.095 LGA T 24 T 24 6.059 0 0.025 0.042 8.492 19.643 17.619 LGA K 25 K 25 7.484 0 0.162 0.917 11.458 9.048 5.503 LGA L 26 L 26 6.565 0 0.080 1.404 8.514 10.833 17.143 LGA G 27 G 27 8.993 0 0.303 0.303 9.436 4.286 4.286 LGA A 28 A 28 7.692 0 0.616 0.599 7.870 10.357 9.714 LGA I 29 I 29 2.892 0 0.610 0.505 4.454 52.262 52.202 LGA Y 30 Y 30 3.155 0 0.593 1.403 9.759 52.262 25.198 LGA D 31 D 31 2.824 0 0.565 1.289 8.571 77.857 45.714 LGA K 32 K 32 2.410 0 0.077 0.980 4.448 54.524 52.857 LGA T 33 T 33 5.412 0 0.073 0.456 8.974 32.976 23.061 LGA K 34 K 34 1.309 0 0.158 0.691 8.775 61.667 48.942 LGA K 35 K 35 4.003 0 0.165 1.353 8.469 30.000 36.085 LGA Y 36 Y 36 10.218 0 0.077 1.336 15.456 2.857 0.952 LGA W 37 W 37 14.759 0 0.041 1.143 17.891 0.000 0.000 LGA V 38 V 38 17.370 0 0.132 1.237 18.939 0.000 0.000 LGA Y 39 Y 39 22.297 0 0.077 0.242 29.477 0.000 0.000 LGA Q 40 Q 40 25.293 0 0.488 1.256 34.116 0.000 0.000 LGA G 41 G 41 20.553 0 0.145 0.145 22.469 0.000 0.000 LGA K 42 K 42 19.602 0 0.420 1.447 25.686 0.000 0.000 LGA P 43 P 43 15.191 0 0.050 0.258 17.225 0.000 0.000 LGA V 44 V 44 15.274 0 0.189 0.164 15.609 0.000 0.000 LGA M 45 M 45 16.517 0 0.601 0.656 20.566 0.000 0.000 LGA P 46 P 46 15.776 0 0.645 0.623 17.762 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 8.346 8.197 9.564 25.891 19.620 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 13 2.84 37.143 34.134 0.443 LGA_LOCAL RMSD: 2.836 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.052 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 8.346 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.750557 * X + -0.258184 * Y + 0.608281 * Z + -1.147179 Y_new = 0.176299 * X + -0.808911 * Y + -0.560876 * Z + 12.592652 Z_new = 0.636854 * X + 0.528208 * Y + -0.561616 * Z + 18.302776 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.230708 -0.690411 2.386839 [DEG: 13.2186 -39.5576 136.7558 ] ZXZ: 0.825922 2.167134 0.878382 [DEG: 47.3218 124.1676 50.3276 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS248_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS248_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 13 2.84 34.134 8.35 REMARK ---------------------------------------------------------- MOLECULE T0548TS248_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT N/A ATOM 100 N HIS 12 -43.612 -18.408 37.989 1.00 1.00 N ATOM 101 CA HIS 12 -42.793 -18.427 39.158 1.00 1.00 C ATOM 102 C HIS 12 -41.816 -19.542 39.005 1.00 1.00 C ATOM 103 O HIS 12 -40.638 -19.385 39.319 1.00 1.00 O ATOM 104 H HIS 12 -44.601 -18.595 38.078 1.00 1.00 H ATOM 105 CB HIS 12 -43.571 -18.609 40.475 1.00 1.00 C ATOM 106 CG HIS 12 -44.335 -19.893 40.580 1.00 1.00 C ATOM 107 ND1 HIS 12 -45.595 -20.083 40.057 1.00 1.00 N ATOM 108 CD2 HIS 12 -44.006 -21.063 41.191 1.00 1.00 C ATOM 109 CE1 HIS 12 -45.965 -21.348 40.378 1.00 1.00 C ATOM 110 NE2 HIS 12 -45.034 -21.982 41.067 1.00 1.00 N ATOM 111 HD1 HIS 12 -44.671 -19.909 40.428 1.00 1.00 H ATOM 112 HE2 HIS 12 -44.264 -21.336 41.177 1.00 1.00 H ATOM 113 N PHE 13 -42.264 -20.703 38.491 1.00 1.00 N ATOM 114 CA PHE 13 -41.309 -21.759 38.360 1.00 1.00 C ATOM 115 C PHE 13 -40.202 -21.363 37.446 1.00 1.00 C ATOM 116 O PHE 13 -39.040 -21.533 37.807 1.00 1.00 O ATOM 117 H PHE 13 -43.224 -20.845 38.208 1.00 1.00 H ATOM 118 CB PHE 13 -41.859 -23.116 37.883 1.00 1.00 C ATOM 119 CG PHE 13 -42.250 -23.877 39.103 1.00 1.00 C ATOM 120 CD1 PHE 13 -41.287 -24.598 39.773 1.00 1.00 C ATOM 121 CD2 PHE 13 -43.535 -23.870 39.593 1.00 1.00 C ATOM 122 CE1 PHE 13 -41.592 -25.312 40.907 1.00 1.00 C ATOM 123 CE2 PHE 13 -43.848 -24.586 40.728 1.00 1.00 C ATOM 124 CZ PHE 13 -42.879 -25.309 41.387 1.00 1.00 C ATOM 125 N HIS 14 -40.497 -20.815 36.249 1.00 1.00 N ATOM 126 CA HIS 14 -39.362 -20.519 35.427 1.00 1.00 C ATOM 127 C HIS 14 -39.224 -19.054 35.208 1.00 1.00 C ATOM 128 O HIS 14 -39.060 -18.580 34.087 1.00 1.00 O ATOM 129 H HIS 14 -41.443 -20.655 35.935 1.00 1.00 H ATOM 130 CB HIS 14 -39.352 -21.280 34.097 1.00 1.00 C ATOM 131 CG HIS 14 -39.026 -22.720 34.355 1.00 1.00 C ATOM 132 ND1 HIS 14 -37.743 -23.224 34.412 1.00 1.00 N ATOM 133 CD2 HIS 14 -39.847 -23.774 34.611 1.00 1.00 C ATOM 134 CE1 HIS 14 -37.854 -24.544 34.697 1.00 1.00 C ATOM 135 NE2 HIS 14 -39.113 -24.925 34.828 1.00 1.00 N ATOM 136 HD1 HIS 14 -38.668 -22.821 34.363 1.00 1.00 H ATOM 137 HE2 HIS 14 -39.680 -24.103 34.675 1.00 1.00 H ATOM 138 N TYR 15 -39.256 -18.309 36.324 1.00 1.00 N ATOM 139 CA TYR 15 -39.069 -16.892 36.352 1.00 1.00 C ATOM 140 C TYR 15 -37.639 -16.626 35.993 1.00 1.00 C ATOM 141 O TYR 15 -37.323 -15.687 35.264 1.00 1.00 O ATOM 142 H TYR 15 -39.366 -18.705 37.247 1.00 1.00 H ATOM 143 CB TYR 15 -39.342 -16.337 37.762 1.00 1.00 C ATOM 144 CG TYR 15 -39.189 -14.856 37.775 1.00 1.00 C ATOM 145 CD1 TYR 15 -40.237 -14.055 37.386 1.00 1.00 C ATOM 146 CD2 TYR 15 -38.008 -14.270 38.166 1.00 1.00 C ATOM 147 CE1 TYR 15 -40.113 -12.687 37.397 1.00 1.00 C ATOM 148 CE2 TYR 15 -37.878 -12.901 38.181 1.00 1.00 C ATOM 149 CZ TYR 15 -38.934 -12.109 37.797 1.00 1.00 C ATOM 150 OH TYR 15 -38.806 -10.704 37.812 1.00 1.00 H ATOM 151 N THR 16 -36.744 -17.486 36.513 1.00 1.00 N ATOM 152 CA THR 16 -35.317 -17.395 36.391 1.00 1.00 C ATOM 153 C THR 16 -34.881 -17.573 34.970 1.00 1.00 C ATOM 154 O THR 16 -33.873 -17.002 34.558 1.00 1.00 O ATOM 155 H THR 16 -37.005 -18.261 37.104 1.00 1.00 H ATOM 156 CB THR 16 -34.619 -18.441 37.206 1.00 1.00 C ATOM 157 OG1 THR 16 -34.936 -19.733 36.711 1.00 1.00 O ATOM 158 CG2 THR 16 -35.092 -18.307 38.662 1.00 1.00 C ATOM 159 N VAL 17 -35.625 -18.369 34.179 1.00 1.00 N ATOM 160 CA VAL 17 -35.186 -18.701 32.854 1.00 1.00 C ATOM 161 C VAL 17 -34.975 -17.451 32.060 1.00 1.00 C ATOM 162 O VAL 17 -33.991 -17.342 31.331 1.00 1.00 O ATOM 163 H VAL 17 -36.455 -18.845 34.503 1.00 1.00 H ATOM 164 CB VAL 17 -36.163 -19.568 32.109 1.00 1.00 C ATOM 165 CG1 VAL 17 -36.358 -20.868 32.902 1.00 1.00 C ATOM 166 CG2 VAL 17 -37.459 -18.784 31.861 1.00 1.00 C ATOM 167 N THR 18 -35.879 -16.464 32.177 1.00 1.00 N ATOM 168 CA THR 18 -35.734 -15.277 31.386 1.00 1.00 C ATOM 169 C THR 18 -35.462 -14.114 32.288 1.00 1.00 C ATOM 170 O THR 18 -36.024 -13.996 33.375 1.00 1.00 O ATOM 171 H THR 18 -36.690 -16.529 32.776 1.00 1.00 H ATOM 172 CB THR 18 -36.972 -14.962 30.600 1.00 1.00 C ATOM 173 OG1 THR 18 -37.271 -16.031 29.716 1.00 1.00 O ATOM 174 CG2 THR 18 -36.767 -13.653 29.819 1.00 1.00 C ATOM 175 N ASP 19 -34.519 -13.252 31.863 1.00 1.00 N ATOM 176 CA ASP 19 -34.176 -12.065 32.586 1.00 1.00 C ATOM 177 C ASP 19 -35.309 -11.090 32.479 1.00 1.00 C ATOM 178 O ASP 19 -35.731 -10.489 33.467 1.00 1.00 O ATOM 179 H ASP 19 -34.019 -13.369 30.993 1.00 1.00 H ATOM 180 CB ASP 19 -32.932 -11.385 31.996 1.00 1.00 C ATOM 181 CG ASP 19 -31.744 -12.312 32.215 1.00 1.00 C ATOM 182 OD1 ASP 19 -31.870 -13.248 33.049 1.00 1.00 O ATOM 183 OD2 ASP 19 -30.695 -12.102 31.549 1.00 1.00 O ATOM 184 N ILE 20 -35.850 -10.941 31.256 1.00 1.00 N ATOM 185 CA ILE 20 -36.864 -9.965 30.988 1.00 1.00 C ATOM 186 C ILE 20 -38.208 -10.533 31.295 1.00 1.00 C ATOM 187 O ILE 20 -38.503 -11.688 30.989 1.00 1.00 O ATOM 188 H ILE 20 -35.525 -11.449 30.445 1.00 1.00 H ATOM 189 CB ILE 20 -36.877 -9.503 29.561 1.00 1.00 C ATOM 190 CG1 ILE 20 -37.872 -8.342 29.394 1.00 1.00 C ATOM 191 CG2 ILE 20 -37.154 -10.719 28.662 1.00 1.00 C ATOM 192 CD1 ILE 20 -37.750 -7.605 28.063 1.00 1.00 C ATOM 193 N LYS 21 -39.050 -9.704 31.939 1.00 1.00 N ATOM 194 CA LYS 21 -40.380 -10.068 32.323 1.00 1.00 C ATOM 195 C LYS 21 -41.196 -10.324 31.099 1.00 1.00 C ATOM 196 O LYS 21 -42.032 -11.226 31.089 1.00 1.00 O ATOM 197 H LYS 21 -38.801 -8.762 32.200 1.00 1.00 H ATOM 198 CB LYS 21 -41.086 -8.963 33.130 1.00 1.00 C ATOM 199 CG LYS 21 -40.998 -7.585 32.464 1.00 1.00 C ATOM 200 CD LYS 21 -41.918 -6.525 33.074 1.00 1.00 C ATOM 201 CE LYS 21 -41.547 -5.098 32.661 1.00 1.00 C ATOM 202 NZ LYS 21 -41.585 -4.979 31.187 1.00 1.00 N ATOM 203 N ASP 22 -40.962 -9.551 30.022 1.00 1.00 N ATOM 204 CA ASP 22 -41.787 -9.685 28.857 1.00 1.00 C ATOM 205 C ASP 22 -41.720 -11.095 28.367 1.00 1.00 C ATOM 206 O ASP 22 -42.748 -11.694 28.051 1.00 1.00 O ATOM 207 H ASP 22 -40.267 -8.818 30.011 1.00 1.00 H ATOM 208 CB ASP 22 -41.349 -8.785 27.684 1.00 1.00 C ATOM 209 CG ASP 22 -41.721 -7.347 28.011 1.00 1.00 C ATOM 210 OD1 ASP 22 -42.245 -7.124 29.136 1.00 1.00 O ATOM 211 OD2 ASP 22 -41.498 -6.457 27.148 1.00 1.00 O ATOM 212 N LEU 23 -40.503 -11.662 28.291 1.00 1.00 N ATOM 213 CA LEU 23 -40.335 -13.002 27.809 1.00 1.00 C ATOM 214 C LEU 23 -40.962 -13.973 28.759 1.00 1.00 C ATOM 215 O LEU 23 -41.659 -14.897 28.344 1.00 1.00 O ATOM 216 H LEU 23 -39.654 -11.178 28.548 1.00 1.00 H ATOM 217 CB LEU 23 -38.858 -13.392 27.648 1.00 1.00 C ATOM 218 CG LEU 23 -38.129 -12.566 26.572 1.00 1.00 C ATOM 219 CD1 LEU 23 -36.701 -13.086 26.331 1.00 1.00 C ATOM 220 CD2 LEU 23 -38.958 -12.477 25.281 1.00 1.00 C ATOM 221 N THR 24 -40.752 -13.775 30.072 1.00 1.00 N ATOM 222 CA THR 24 -41.253 -14.700 31.048 1.00 1.00 C ATOM 223 C THR 24 -42.744 -14.708 30.986 1.00 1.00 C ATOM 224 O THR 24 -43.380 -15.752 31.147 1.00 1.00 O ATOM 225 H THR 24 -40.199 -13.010 30.431 1.00 1.00 H ATOM 226 CB THR 24 -40.840 -14.349 32.447 1.00 1.00 C ATOM 227 OG1 THR 24 -41.351 -13.074 32.807 1.00 1.00 O ATOM 228 CG2 THR 24 -39.303 -14.361 32.521 1.00 1.00 C ATOM 229 N LYS 25 -43.339 -13.528 30.752 1.00 1.00 N ATOM 230 CA LYS 25 -44.765 -13.402 30.702 1.00 1.00 C ATOM 231 C LYS 25 -45.299 -14.280 29.615 1.00 1.00 C ATOM 232 O LYS 25 -46.204 -15.082 29.843 1.00 1.00 O ATOM 233 H LYS 25 -42.824 -12.669 30.623 1.00 1.00 H ATOM 234 CB LYS 25 -45.206 -11.978 30.327 1.00 1.00 C ATOM 235 CG LYS 25 -46.723 -11.808 30.238 1.00 1.00 C ATOM 236 CD LYS 25 -47.160 -10.390 29.869 1.00 1.00 C ATOM 237 CE LYS 25 -46.806 -9.333 30.919 1.00 1.00 C ATOM 238 NZ LYS 25 -47.295 -8.007 30.476 1.00 1.00 N ATOM 239 N LEU 26 -44.718 -14.178 28.406 1.00 1.00 N ATOM 240 CA LEU 26 -45.207 -14.926 27.284 1.00 1.00 C ATOM 241 C LEU 26 -45.033 -16.380 27.562 1.00 1.00 C ATOM 242 O LEU 26 -45.848 -17.201 27.151 1.00 1.00 O ATOM 243 H LEU 26 -43.954 -13.546 28.214 1.00 1.00 H ATOM 244 CB LEU 26 -44.515 -14.573 25.957 1.00 1.00 C ATOM 245 CG LEU 26 -44.868 -13.154 25.468 1.00 1.00 C ATOM 246 CD1 LEU 26 -44.287 -12.875 24.073 1.00 1.00 C ATOM 247 CD2 LEU 26 -46.384 -12.900 25.538 1.00 1.00 C ATOM 248 N GLY 27 -43.951 -16.761 28.253 1.00 1.00 N ATOM 249 CA GLY 27 -43.824 -18.156 28.536 1.00 1.00 C ATOM 250 C GLY 27 -44.986 -18.529 29.402 1.00 1.00 C ATOM 251 O GLY 27 -45.583 -19.593 29.238 1.00 1.00 O ATOM 252 H GLY 27 -43.256 -16.109 28.588 1.00 1.00 H ATOM 253 N ALA 28 -45.334 -17.634 30.347 1.00 1.00 N ATOM 254 CA ALA 28 -46.385 -17.833 31.306 1.00 1.00 C ATOM 255 C ALA 28 -47.704 -17.993 30.597 1.00 1.00 C ATOM 256 O ALA 28 -48.536 -18.787 31.030 1.00 1.00 O ATOM 257 H ALA 28 -44.850 -16.757 30.480 1.00 1.00 H ATOM 258 CB ALA 28 -46.535 -16.658 32.285 1.00 1.00 C ATOM 259 N ILE 29 -47.949 -17.239 29.501 1.00 1.00 N ATOM 260 CA ILE 29 -49.212 -17.343 28.809 1.00 1.00 C ATOM 261 C ILE 29 -49.303 -18.741 28.300 1.00 1.00 C ATOM 262 O ILE 29 -50.377 -19.339 28.247 1.00 1.00 O ATOM 263 H ILE 29 -47.287 -16.572 29.134 1.00 1.00 H ATOM 264 CB ILE 29 -49.389 -16.414 27.634 1.00 1.00 C ATOM 265 CG1 ILE 29 -48.454 -16.776 26.473 1.00 1.00 C ATOM 266 CG2 ILE 29 -49.213 -14.977 28.149 1.00 1.00 C ATOM 267 CD1 ILE 29 -48.733 -15.998 25.187 1.00 1.00 C ATOM 268 N TYR 30 -48.146 -19.287 27.897 1.00 1.00 N ATOM 269 CA TYR 30 -48.051 -20.647 27.464 1.00 1.00 C ATOM 270 C TYR 30 -48.521 -21.492 28.611 1.00 1.00 C ATOM 271 O TYR 30 -49.215 -22.489 28.434 1.00 1.00 O ATOM 272 H TYR 30 -47.264 -18.795 27.931 1.00 1.00 H ATOM 273 CB TYR 30 -46.600 -21.032 27.120 1.00 1.00 C ATOM 274 CG TYR 30 -46.492 -22.516 27.069 1.00 1.00 C ATOM 275 CD1 TYR 30 -47.175 -23.242 26.127 1.00 1.00 C ATOM 276 CD2 TYR 30 -45.677 -23.180 27.958 1.00 1.00 C ATOM 277 CE1 TYR 30 -47.050 -24.609 26.085 1.00 1.00 C ATOM 278 CE2 TYR 30 -45.550 -24.550 27.918 1.00 1.00 C ATOM 279 CZ TYR 30 -46.246 -25.271 26.981 1.00 1.00 C ATOM 280 OH TYR 30 -46.133 -26.677 26.921 1.00 1.00 H ATOM 281 N ASP 31 -48.157 -21.104 29.842 1.00 1.00 N ATOM 282 CA ASP 31 -48.571 -21.812 31.017 1.00 1.00 C ATOM 283 C ASP 31 -50.062 -21.731 31.092 1.00 1.00 C ATOM 284 O ASP 31 -50.724 -22.636 31.582 1.00 1.00 O ATOM 285 H ASP 31 -47.593 -20.285 30.015 1.00 1.00 H ATOM 286 CB ASP 31 -47.992 -21.185 32.300 1.00 1.00 C ATOM 287 CG ASP 31 -46.474 -21.316 32.238 1.00 1.00 C ATOM 288 OD1 ASP 31 -45.990 -22.033 31.322 1.00 1.00 O ATOM 289 OD2 ASP 31 -45.782 -20.704 33.096 1.00 1.00 O ATOM 290 N LYS 32 -50.671 -20.629 30.645 1.00 1.00 N ATOM 291 CA LYS 32 -52.098 -20.625 30.716 1.00 1.00 C ATOM 292 C LYS 32 -52.611 -21.694 29.805 1.00 1.00 C ATOM 293 O LYS 32 -53.546 -22.425 30.132 1.00 1.00 O ATOM 294 H LYS 32 -50.170 -19.842 30.258 1.00 1.00 H ATOM 295 CB LYS 32 -52.698 -19.270 30.325 1.00 1.00 C ATOM 296 CG LYS 32 -52.328 -18.188 31.341 1.00 1.00 C ATOM 297 CD LYS 32 -52.618 -16.773 30.845 1.00 1.00 C ATOM 298 CE LYS 32 -54.113 -16.463 30.725 1.00 1.00 C ATOM 299 NZ LYS 32 -54.311 -15.140 30.091 1.00 1.00 N ATOM 300 N THR 33 -52.019 -21.839 28.612 1.00 1.00 N ATOM 301 CA THR 33 -52.544 -22.887 27.805 1.00 1.00 C ATOM 302 C THR 33 -52.248 -24.190 28.476 1.00 1.00 C ATOM 303 O THR 33 -53.065 -25.104 28.415 1.00 1.00 O ATOM 304 H THR 33 -51.250 -21.261 28.307 1.00 1.00 H ATOM 305 CB THR 33 -52.032 -22.908 26.386 1.00 1.00 C ATOM 306 OG1 THR 33 -50.618 -22.985 26.344 1.00 1.00 O ATOM 307 CG2 THR 33 -52.520 -21.648 25.659 1.00 1.00 C ATOM 308 N LYS 34 -51.049 -24.340 29.075 1.00 1.00 N ATOM 309 CA LYS 34 -50.637 -25.595 29.653 1.00 1.00 C ATOM 310 C LYS 34 -51.303 -26.009 30.945 1.00 1.00 C ATOM 311 O LYS 34 -51.708 -27.155 31.121 1.00 1.00 O ATOM 312 H LYS 34 -50.347 -23.614 29.089 1.00 1.00 H ATOM 313 CB LYS 34 -49.120 -25.671 29.843 1.00 1.00 C ATOM 314 CG LYS 34 -48.646 -27.095 30.097 1.00 1.00 C ATOM 315 CD LYS 34 -47.165 -27.315 29.793 1.00 1.00 C ATOM 316 CE LYS 34 -46.210 -26.407 30.569 1.00 1.00 C ATOM 317 NZ LYS 34 -44.809 -26.753 30.232 1.00 1.00 N ATOM 318 N LYS 35 -51.401 -25.087 31.905 1.00 1.00 N ATOM 319 CA LYS 35 -51.864 -25.333 33.236 1.00 1.00 C ATOM 320 C LYS 35 -53.324 -25.644 33.288 1.00 1.00 C ATOM 321 O LYS 35 -53.736 -26.502 34.066 1.00 1.00 O ATOM 322 H LYS 35 -51.054 -24.145 31.800 1.00 1.00 H ATOM 323 CB LYS 35 -51.561 -24.151 34.159 1.00 1.00 C ATOM 324 CG LYS 35 -50.061 -23.860 34.205 1.00 1.00 C ATOM 325 CD LYS 35 -49.228 -25.074 34.619 1.00 1.00 C ATOM 326 CE LYS 35 -48.932 -26.042 33.469 1.00 1.00 C ATOM 327 NZ LYS 35 -48.295 -27.273 33.992 1.00 1.00 N ATOM 328 N TYR 36 -54.148 -24.953 32.483 1.00 1.00 N ATOM 329 CA TYR 36 -55.568 -25.182 32.511 1.00 1.00 C ATOM 330 C TYR 36 -55.928 -26.361 31.658 1.00 1.00 C ATOM 331 O TYR 36 -55.378 -26.544 30.573 1.00 1.00 O ATOM 332 H TYR 36 -53.825 -24.237 31.848 1.00 1.00 H ATOM 333 CB TYR 36 -56.423 -24.006 32.002 1.00 1.00 C ATOM 334 CG TYR 36 -56.515 -22.951 33.052 1.00 1.00 C ATOM 335 CD1 TYR 36 -55.522 -22.013 33.227 1.00 1.00 C ATOM 336 CD2 TYR 36 -57.625 -22.901 33.864 1.00 1.00 C ATOM 337 CE1 TYR 36 -55.640 -21.050 34.203 1.00 1.00 C ATOM 338 CE2 TYR 36 -57.751 -21.944 34.841 1.00 1.00 C ATOM 339 CZ TYR 36 -56.752 -21.014 35.009 1.00 1.00 C ATOM 340 OH TYR 36 -56.869 -20.025 36.009 1.00 1.00 H ATOM 341 N TRP 37 -56.861 -27.208 32.156 1.00 1.00 N ATOM 342 CA TRP 37 -57.331 -28.354 31.419 1.00 1.00 C ATOM 343 C TRP 37 -58.794 -28.166 31.144 1.00 1.00 C ATOM 344 O TRP 37 -59.531 -27.638 31.977 1.00 1.00 O ATOM 345 H TRP 37 -57.305 -27.072 33.053 1.00 1.00 H ATOM 346 CB TRP 37 -57.265 -29.685 32.186 1.00 1.00 C ATOM 347 CG TRP 37 -55.886 -30.252 32.415 1.00 1.00 C ATOM 348 CD1 TRP 37 -55.176 -31.134 31.654 1.00 1.00 C ATOM 349 CD2 TRP 37 -55.071 -29.945 33.553 1.00 1.00 C ATOM 350 NE1 TRP 37 -53.963 -31.393 32.246 1.00 1.00 N ATOM 351 CE2 TRP 37 -53.884 -30.667 33.417 1.00 1.00 C ATOM 352 CE3 TRP 37 -55.291 -29.126 34.622 1.00 1.00 C ATOM 353 CZ2 TRP 37 -52.896 -30.582 34.355 1.00 1.00 C ATOM 354 CZ3 TRP 37 -54.296 -29.043 35.568 1.00 1.00 C ATOM 355 CH2 TRP 37 -53.122 -29.757 35.437 1.00 1.00 H ATOM 356 HH2 TRP 37 -54.845 -31.226 31.784 1.00 1.00 H ATOM 357 N VAL 38 -59.251 -28.618 29.956 1.00 1.00 N ATOM 358 CA VAL 38 -60.630 -28.470 29.587 1.00 1.00 C ATOM 359 C VAL 38 -60.948 -29.469 28.523 1.00 1.00 C ATOM 360 O VAL 38 -60.069 -30.153 28.001 1.00 1.00 O ATOM 361 H VAL 38 -58.656 -29.064 29.272 1.00 1.00 H ATOM 362 CB VAL 38 -60.932 -27.124 28.992 1.00 1.00 C ATOM 363 CG1 VAL 38 -60.690 -26.051 30.065 1.00 1.00 C ATOM 364 CG2 VAL 38 -60.068 -26.944 27.731 1.00 1.00 C ATOM 365 N TYR 39 -62.249 -29.574 28.188 1.00 1.00 N ATOM 366 CA TYR 39 -62.679 -30.406 27.105 1.00 1.00 C ATOM 367 C TYR 39 -62.475 -31.837 27.485 1.00 1.00 C ATOM 368 O TYR 39 -61.579 -32.173 28.257 1.00 1.00 O ATOM 369 H TYR 39 -62.974 -29.019 28.621 1.00 1.00 H ATOM 370 CB TYR 39 -61.938 -30.099 25.794 1.00 1.00 C ATOM 371 CG TYR 39 -62.714 -30.686 24.667 1.00 1.00 C ATOM 372 CD1 TYR 39 -63.748 -29.976 24.096 1.00 1.00 C ATOM 373 CD2 TYR 39 -62.412 -31.935 24.179 1.00 1.00 C ATOM 374 CE1 TYR 39 -64.474 -30.500 23.054 1.00 1.00 C ATOM 375 CE2 TYR 39 -63.136 -32.464 23.137 1.00 1.00 C ATOM 376 CZ TYR 39 -64.166 -31.750 22.572 1.00 1.00 C ATOM 377 OH TYR 39 -64.905 -32.299 21.502 1.00 1.00 H ATOM 378 N GLN 40 -63.354 -32.732 26.996 1.00 1.00 N ATOM 379 CA GLN 40 -63.193 -34.107 27.361 1.00 1.00 C ATOM 380 C GLN 40 -61.898 -34.587 26.809 1.00 1.00 C ATOM 381 O GLN 40 -61.480 -34.214 25.714 1.00 1.00 O ATOM 382 H GLN 40 -64.125 -32.474 26.397 1.00 1.00 H ATOM 383 CB GLN 40 -64.306 -35.055 26.885 1.00 1.00 C ATOM 384 CG GLN 40 -64.033 -36.519 27.244 1.00 1.00 C ATOM 385 CD GLN 40 -63.895 -36.648 28.756 1.00 1.00 C ATOM 386 OE1 GLN 40 -63.116 -35.947 29.398 1.00 1.00 O ATOM 387 NE2 GLN 40 -64.679 -37.589 29.345 1.00 1.00 N ATOM 388 HE21 GLN 40 -64.111 -36.899 28.874 1.00 1.00 H ATOM 389 HE22 GLN 40 -64.083 -36.881 28.941 1.00 1.00 H ATOM 390 N GLY 41 -61.236 -35.456 27.593 1.00 1.00 N ATOM 391 CA GLY 41 -59.923 -35.913 27.283 1.00 1.00 C ATOM 392 C GLY 41 -59.061 -35.067 28.142 1.00 1.00 C ATOM 393 O GLY 41 -57.863 -35.308 28.292 1.00 1.00 O ATOM 394 H GLY 41 -61.585 -35.765 28.488 1.00 1.00 H ATOM 395 N LYS 42 -59.710 -34.061 28.761 1.00 1.00 N ATOM 396 CA LYS 42 -59.049 -33.106 29.595 1.00 1.00 C ATOM 397 C LYS 42 -57.823 -32.632 28.887 1.00 1.00 C ATOM 398 O LYS 42 -56.748 -32.770 29.470 1.00 1.00 O ATOM 399 H LYS 42 -60.700 -33.895 28.651 1.00 1.00 H ATOM 400 CB LYS 42 -58.612 -33.711 30.938 1.00 1.00 C ATOM 401 CG LYS 42 -59.795 -34.241 31.747 1.00 1.00 C ATOM 402 CD LYS 42 -59.400 -35.215 32.856 1.00 1.00 C ATOM 403 CE LYS 42 -59.367 -36.675 32.398 1.00 1.00 C ATOM 404 NZ LYS 42 -58.103 -36.961 31.683 1.00 1.00 N ATOM 405 N PRO 43 -57.856 -32.099 27.682 1.00 1.00 N ATOM 406 CA PRO 43 -56.615 -31.717 27.103 1.00 1.00 C ATOM 407 C PRO 43 -56.232 -30.363 27.554 1.00 1.00 C ATOM 408 O PRO 43 -57.101 -29.553 27.867 1.00 1.00 O ATOM 409 H PRO 43 -57.856 -32.099 27.682 1.00 1.00 H ATOM 410 CB PRO 43 -56.788 -31.803 25.587 1.00 1.00 C ATOM 411 CG PRO 43 -58.304 -31.699 25.375 1.00 1.00 C ATOM 412 CD PRO 43 -58.870 -32.326 26.655 1.00 1.00 C ATOM 413 N VAL 44 -54.920 -30.122 27.586 1.00 1.00 N ATOM 414 CA VAL 44 -54.325 -28.856 27.835 1.00 1.00 C ATOM 415 C VAL 44 -53.994 -28.422 26.453 1.00 1.00 C ATOM 416 O VAL 44 -53.850 -29.276 25.582 1.00 1.00 O ATOM 417 H VAL 44 -54.228 -30.809 27.323 1.00 1.00 H ATOM 418 CB VAL 44 -53.049 -29.024 28.590 1.00 1.00 C ATOM 419 CG1 VAL 44 -52.269 -27.722 28.495 1.00 1.00 C ATOM 420 CG2 VAL 44 -53.394 -29.432 30.032 1.00 1.00 C ATOM 421 N MET 45 -53.918 -27.110 26.167 1.00 1.00 N ATOM 422 CA MET 45 -53.559 -26.816 24.808 1.00 1.00 C ATOM 423 C MET 45 -52.176 -27.356 24.579 1.00 1.00 C ATOM 424 O MET 45 -51.898 -27.947 23.537 1.00 1.00 O ATOM 425 H MET 45 -54.077 -26.387 26.854 1.00 1.00 H ATOM 426 CB MET 45 -53.587 -25.320 24.436 1.00 1.00 C ATOM 427 CG MET 45 -53.199 -25.048 22.980 1.00 1.00 C ATOM 428 SD MET 45 -53.546 -23.353 22.422 1.00 1.00 S ATOM 429 CE MET 45 -55.319 -23.646 22.164 1.00 1.00 C ATOM 430 N PRO 46 -51.298 -27.175 25.530 1.00 1.00 N ATOM 431 CA PRO 46 -49.984 -27.724 25.399 1.00 1.00 C ATOM 432 C PRO 46 -49.980 -29.208 25.432 1.00 1.00 C ATOM 433 O PRO 46 -49.061 -29.784 24.864 1.00 1.00 O ATOM 434 H PRO 46 -51.298 -27.175 25.530 1.00 1.00 H ATOM 435 CB PRO 46 -49.145 -27.085 26.497 1.00 1.00 C ATOM 436 CG PRO 46 -49.806 -25.712 26.677 1.00 1.00 C ATOM 437 CD PRO 46 -51.264 -25.932 26.261 1.00 1.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 296 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 83.12 54.4 68 100.0 68 ARMSMC SECONDARY STRUCTURE . . 72.16 61.8 34 100.0 34 ARMSMC SURFACE . . . . . . . . 85.35 55.4 56 100.0 56 ARMSMC BURIED . . . . . . . . 71.79 50.0 12 100.0 12 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 70.33 56.2 32 100.0 32 ARMSSC1 RELIABLE SIDE CHAINS . 64.56 58.6 29 100.0 29 ARMSSC1 SECONDARY STRUCTURE . . 80.82 52.9 17 100.0 17 ARMSSC1 SURFACE . . . . . . . . 68.13 55.6 27 100.0 27 ARMSSC1 BURIED . . . . . . . . 81.21 60.0 5 100.0 5 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.52 60.0 25 100.0 25 ARMSSC2 RELIABLE SIDE CHAINS . 63.89 61.9 21 100.0 21 ARMSSC2 SECONDARY STRUCTURE . . 60.70 84.6 13 100.0 13 ARMSSC2 SURFACE . . . . . . . . 61.28 63.6 22 100.0 22 ARMSSC2 BURIED . . . . . . . . 107.63 33.3 3 100.0 3 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 90.04 25.0 8 100.0 8 ARMSSC3 RELIABLE SIDE CHAINS . 95.24 28.6 7 100.0 7 ARMSSC3 SECONDARY STRUCTURE . . 91.79 50.0 2 100.0 2 ARMSSC3 SURFACE . . . . . . . . 90.04 25.0 8 100.0 8 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 39.29 83.3 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 39.29 83.3 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 4.63 100.0 2 100.0 2 ARMSSC4 SURFACE . . . . . . . . 39.29 83.3 6 100.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.35 (Number of atoms: 35) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.35 35 100.0 35 CRMSCA CRN = ALL/NP . . . . . 0.2385 CRMSCA SECONDARY STRUCTURE . . 7.75 17 100.0 17 CRMSCA SURFACE . . . . . . . . 8.43 29 100.0 29 CRMSCA BURIED . . . . . . . . 7.92 6 100.0 6 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.34 173 100.0 173 CRMSMC SECONDARY STRUCTURE . . 7.86 85 100.0 85 CRMSMC SURFACE . . . . . . . . 8.39 143 100.0 143 CRMSMC BURIED . . . . . . . . 8.09 30 100.0 30 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 10.72 156 100.0 156 CRMSSC RELIABLE SIDE CHAINS . 10.86 136 100.0 136 CRMSSC SECONDARY STRUCTURE . . 10.73 84 100.0 84 CRMSSC SURFACE . . . . . . . . 10.49 127 100.0 127 CRMSSC BURIED . . . . . . . . 11.66 29 100.0 29 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 9.61 296 100.0 296 CRMSALL SECONDARY STRUCTURE . . 9.49 152 100.0 152 CRMSALL SURFACE . . . . . . . . 9.48 243 100.0 243 CRMSALL BURIED . . . . . . . . 10.16 53 100.0 53 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.944 0.756 0.378 35 100.0 35 ERRCA SECONDARY STRUCTURE . . 6.363 0.738 0.369 17 100.0 17 ERRCA SURFACE . . . . . . . . 6.978 0.754 0.377 29 100.0 29 ERRCA BURIED . . . . . . . . 6.783 0.766 0.383 6 100.0 6 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.953 0.757 0.379 173 100.0 173 ERRMC SECONDARY STRUCTURE . . 6.472 0.741 0.371 85 100.0 85 ERRMC SURFACE . . . . . . . . 6.973 0.756 0.378 143 100.0 143 ERRMC BURIED . . . . . . . . 6.854 0.763 0.382 30 100.0 30 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.068 0.797 0.399 156 100.0 156 ERRSC RELIABLE SIDE CHAINS . 9.278 0.802 0.401 136 100.0 136 ERRSC SECONDARY STRUCTURE . . 9.159 0.799 0.399 84 100.0 84 ERRSC SURFACE . . . . . . . . 8.794 0.790 0.395 127 100.0 127 ERRSC BURIED . . . . . . . . 10.268 0.826 0.413 29 100.0 29 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 8.013 0.777 0.389 296 100.0 296 ERRALL SECONDARY STRUCTURE . . 7.889 0.771 0.386 152 100.0 152 ERRALL SURFACE . . . . . . . . 7.870 0.773 0.386 243 100.0 243 ERRALL BURIED . . . . . . . . 8.667 0.795 0.398 53 100.0 53 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 1 3 28 35 35 DISTCA CA (P) 0.00 0.00 2.86 8.57 80.00 35 DISTCA CA (RMS) 0.00 0.00 2.96 3.81 7.21 DISTCA ALL (N) 0 1 5 18 201 296 296 DISTALL ALL (P) 0.00 0.34 1.69 6.08 67.91 296 DISTALL ALL (RMS) 0.00 1.98 2.54 3.98 7.36 DISTALL END of the results output