####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 35 ( 358), selected 35 , name T0548TS214_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 35 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS214_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 12 - 30 4.88 15.94 LCS_AVERAGE: 51.67 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 15 - 27 1.82 15.15 LCS_AVERAGE: 27.51 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 19 - 27 0.88 14.41 LCS_AVERAGE: 16.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 35 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT H 12 H 12 4 7 19 2 4 4 5 8 9 9 13 15 16 16 17 17 17 17 17 18 18 19 19 LCS_GDT F 13 F 13 4 7 19 3 4 4 5 8 9 9 13 15 16 16 17 17 17 17 17 18 18 19 19 LCS_GDT H 14 H 14 4 11 19 3 4 5 8 9 12 13 15 15 16 16 17 17 17 17 17 18 18 19 19 LCS_GDT Y 15 Y 15 4 13 19 3 4 5 8 10 12 13 15 15 16 16 17 17 17 17 17 22 24 25 26 LCS_GDT T 16 T 16 8 13 19 5 7 9 12 12 12 13 15 15 16 16 17 17 20 24 24 24 25 26 26 LCS_GDT V 17 V 17 8 13 19 5 7 9 12 12 12 13 15 15 16 18 20 22 23 24 24 24 25 26 26 LCS_GDT T 18 T 18 8 13 19 5 7 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT D 19 D 19 9 13 19 5 7 10 12 12 12 13 15 15 16 18 20 22 23 24 24 24 25 26 26 LCS_GDT I 20 I 20 9 13 19 6 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT K 21 K 21 9 13 19 6 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT D 22 D 22 9 13 19 3 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT L 23 L 23 9 13 19 6 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT T 24 T 24 9 13 19 6 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT K 25 K 25 9 13 19 6 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT L 26 L 26 9 13 19 6 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT G 27 G 27 9 13 19 6 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT A 28 A 28 3 5 19 3 3 5 6 7 8 10 15 15 16 18 20 22 23 24 24 24 25 26 26 LCS_GDT I 29 I 29 3 5 19 3 3 5 6 7 7 8 9 12 14 17 19 22 23 24 24 24 25 26 26 LCS_GDT Y 30 Y 30 3 5 19 3 3 5 6 7 7 8 9 11 14 14 15 16 17 18 21 23 25 26 26 LCS_GDT D 31 D 31 3 5 17 3 3 4 4 6 7 8 9 10 12 14 15 16 17 18 18 21 24 25 26 LCS_GDT K 32 K 32 4 5 17 3 4 4 6 8 9 9 9 10 12 13 15 16 17 18 18 20 23 25 26 LCS_GDT T 33 T 33 4 5 17 3 4 4 4 6 9 9 9 10 12 13 15 16 17 18 18 21 24 25 26 LCS_GDT K 34 K 34 5 8 17 3 4 5 6 7 8 9 10 10 12 13 15 16 17 19 20 23 25 26 26 LCS_GDT K 35 K 35 5 8 17 4 4 5 6 8 9 9 10 10 12 13 15 18 23 24 24 24 25 26 26 LCS_GDT Y 36 Y 36 5 8 17 4 4 5 6 8 9 10 13 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT W 37 W 37 5 8 17 4 4 5 6 8 9 9 14 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT V 38 V 38 5 9 17 4 4 5 6 8 9 9 10 10 12 18 19 22 23 24 24 24 25 26 26 LCS_GDT Y 39 Y 39 5 9 17 3 4 5 6 8 9 9 10 10 12 13 15 16 17 18 18 18 18 19 24 LCS_GDT Q 40 Q 40 4 9 17 3 4 5 6 8 9 9 10 10 12 13 15 16 17 18 18 18 23 25 26 LCS_GDT G 41 G 41 4 9 17 3 4 5 6 8 9 10 14 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT K 42 K 42 5 9 17 3 4 5 6 8 9 10 14 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT P 43 P 43 5 9 17 3 4 5 6 8 9 10 14 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT V 44 V 44 5 9 17 3 4 5 6 8 9 10 14 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT M 45 M 45 5 9 17 3 4 5 6 8 9 10 14 15 17 18 20 22 23 24 24 24 25 26 26 LCS_GDT P 46 P 46 5 9 17 3 4 5 6 8 9 10 14 15 17 18 20 22 23 24 24 24 25 26 26 LCS_AVERAGE LCS_A: 31.95 ( 16.65 27.51 51.67 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 10 12 12 12 13 15 15 17 18 20 22 23 24 24 24 25 26 26 GDT PERCENT_AT 17.14 22.86 28.57 34.29 34.29 34.29 37.14 42.86 42.86 48.57 51.43 57.14 62.86 65.71 68.57 68.57 68.57 71.43 74.29 74.29 GDT RMS_LOCAL 0.33 0.43 1.10 1.36 1.36 1.36 1.82 2.55 2.55 3.37 3.52 4.01 4.38 4.63 4.92 4.92 4.92 5.38 5.65 5.65 GDT RMS_ALL_AT 14.36 14.46 14.15 14.33 14.33 14.33 15.15 15.77 15.77 12.17 12.21 11.59 11.49 11.39 11.08 11.08 11.08 10.98 10.95 10.95 # Checking swapping # possible swapping detected: F 13 F 13 # possible swapping detected: Y 15 Y 15 # possible swapping detected: Y 30 Y 30 # possible swapping detected: D 31 D 31 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA H 12 H 12 11.302 0 0.220 0.959 12.122 0.357 2.571 LGA F 13 F 13 9.763 0 0.127 1.273 13.893 0.476 0.173 LGA H 14 H 14 3.289 0 0.080 1.039 5.318 54.167 52.619 LGA Y 15 Y 15 1.465 0 0.069 0.763 5.802 81.786 57.063 LGA T 16 T 16 0.850 0 0.472 0.538 2.373 83.810 81.701 LGA V 17 V 17 3.194 0 0.122 0.150 6.104 63.095 46.054 LGA T 18 T 18 2.246 0 0.061 0.105 4.486 75.119 59.728 LGA D 19 D 19 2.407 0 0.048 0.132 4.797 67.024 52.976 LGA I 20 I 20 3.531 0 0.111 1.036 6.750 51.905 39.464 LGA K 21 K 21 1.587 0 0.155 0.654 4.281 82.024 67.037 LGA D 22 D 22 1.188 0 0.089 0.131 3.421 79.405 69.286 LGA L 23 L 23 2.659 0 0.158 0.957 7.056 62.857 45.179 LGA T 24 T 24 2.630 0 0.066 1.132 5.535 60.952 52.245 LGA K 25 K 25 2.193 0 0.029 0.802 4.452 65.238 60.476 LGA L 26 L 26 1.662 0 0.098 0.983 4.345 77.143 66.667 LGA G 27 G 27 1.123 0 0.284 0.284 1.495 83.690 83.690 LGA A 28 A 28 4.880 0 0.632 0.594 6.619 30.714 27.238 LGA I 29 I 29 9.675 0 0.618 1.420 13.618 1.905 0.952 LGA Y 30 Y 30 13.311 0 0.053 1.316 19.536 0.000 0.000 LGA D 31 D 31 20.142 0 0.148 1.272 23.727 0.000 0.000 LGA K 32 K 32 20.226 0 0.144 0.694 22.281 0.000 0.000 LGA T 33 T 33 25.575 0 0.092 0.519 27.761 0.000 0.000 LGA K 34 K 34 25.967 0 0.097 1.218 25.967 0.000 0.000 LGA K 35 K 35 22.158 0 0.192 1.175 26.810 0.000 0.000 LGA Y 36 Y 36 22.154 0 0.640 0.452 25.781 0.000 0.000 LGA W 37 W 37 22.265 0 0.099 1.216 26.657 0.000 0.000 LGA V 38 V 38 23.006 0 0.696 1.111 27.301 0.000 0.000 LGA Y 39 Y 39 22.352 0 0.063 0.189 22.703 0.000 0.000 LGA Q 40 Q 40 21.272 0 0.353 0.358 22.426 0.000 0.000 LGA G 41 G 41 22.572 0 0.682 0.682 24.783 0.000 0.000 LGA K 42 K 42 23.890 0 0.212 0.668 32.026 0.000 0.000 LGA P 43 P 43 22.190 0 0.202 0.182 24.069 0.000 0.000 LGA V 44 V 44 21.907 0 0.144 0.917 21.991 0.000 0.000 LGA M 45 M 45 21.555 0 0.624 1.134 21.890 0.000 0.000 LGA P 46 P 46 22.327 0 0.371 0.367 22.923 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 35 140 140 100.00 296 296 100.00 35 SUMMARY(RMSD_GDC): 9.731 9.578 10.758 29.190 24.718 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 35 35 4.0 15 2.55 42.143 38.406 0.565 LGA_LOCAL RMSD: 2.553 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.775 Number of assigned atoms: 35 Std_ASGN_ATOMS RMSD: 9.731 Standard rmsd on all 35 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.750160 * X + 0.388509 * Y + 0.535089 * Z + -34.166752 Y_new = 0.141576 * X + 0.884801 * Y + -0.443941 * Z + -14.962504 Z_new = -0.645922 * X + -0.257271 * Y + -0.718746 * Z + 31.748154 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.955058 0.702231 -2.797859 [DEG: 169.3124 40.2349 -160.3055 ] ZXZ: 0.878231 2.372793 -1.949836 [DEG: 50.3190 135.9510 -111.7174 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS214_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS214_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 35 35 4.0 15 2.55 38.406 9.73 REMARK ---------------------------------------------------------- MOLECULE T0548TS214_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT N/A ATOM 106 N HIS 12 -36.925 -25.563 44.558 1.00 50.00 N ATOM 107 CA HIS 12 -38.054 -24.871 43.862 1.00 50.00 C ATOM 108 C HIS 12 -37.447 -23.951 42.815 1.00 50.00 C ATOM 109 O HIS 12 -36.332 -24.235 42.341 1.00 50.00 O ATOM 110 H HIS 12 -36.131 -25.658 44.145 1.00 50.00 H ATOM 111 CB HIS 12 -38.914 -24.106 44.869 1.00 50.00 C ATOM 112 CG HIS 12 -40.135 -23.481 44.267 1.00 50.00 C ATOM 113 ND1 HIS 12 -41.227 -24.219 43.864 1.00 50.00 N ATOM 114 CE1 HIS 12 -42.160 -23.386 43.368 1.00 50.00 C ATOM 115 CD2 HIS 12 -40.556 -22.126 43.944 1.00 50.00 C ATOM 116 HE2 HIS 12 -42.244 -21.387 43.125 1.00 50.00 H ATOM 117 NE2 HIS 12 -41.763 -22.129 43.413 1.00 50.00 N ATOM 118 N PHE 13 -38.152 -22.861 42.547 1.00 50.00 N ATOM 119 CA PHE 13 -37.616 -21.893 41.594 1.00 50.00 C ATOM 120 C PHE 13 -36.323 -21.223 41.999 1.00 50.00 C ATOM 121 O PHE 13 -36.179 -20.542 43.021 1.00 50.00 O ATOM 122 H PHE 13 -38.947 -22.711 42.941 1.00 50.00 H ATOM 123 CB PHE 13 -38.640 -20.790 41.317 1.00 50.00 C ATOM 124 CG PHE 13 -38.189 -19.787 40.295 1.00 50.00 C ATOM 125 CZ PHE 13 -37.360 -17.925 38.405 1.00 50.00 C ATOM 126 CD1 PHE 13 -37.193 -20.102 39.386 1.00 50.00 C ATOM 127 CE1 PHE 13 -36.778 -19.178 38.446 1.00 50.00 C ATOM 128 CD2 PHE 13 -38.761 -18.527 40.241 1.00 50.00 C ATOM 129 CE2 PHE 13 -38.346 -17.604 39.300 1.00 50.00 C ATOM 130 N HIS 14 -40.103 -23.899 38.916 1.00 50.00 N ATOM 131 CA HIS 14 -39.551 -22.536 38.877 1.00 50.00 C ATOM 132 C HIS 14 -39.412 -21.957 37.464 1.00 50.00 C ATOM 133 O HIS 14 -39.082 -22.679 36.507 1.00 50.00 O ATOM 134 CB HIS 14 -38.181 -22.493 39.555 1.00 50.00 C ATOM 135 CG HIS 14 -37.121 -23.258 38.824 1.00 50.00 C ATOM 136 ND1 HIS 14 -36.470 -22.756 37.719 1.00 50.00 N ATOM 137 CE1 HIS 14 -35.579 -23.666 37.285 1.00 50.00 C ATOM 138 CD2 HIS 14 -36.496 -24.565 38.971 1.00 50.00 C ATOM 139 HE2 HIS 14 -35.058 -25.508 37.917 1.00 50.00 H ATOM 140 NE2 HIS 14 -35.589 -24.753 38.032 1.00 50.00 N ATOM 141 N TYR 15 -39.683 -20.674 37.352 1.00 50.00 N ATOM 142 CA TYR 15 -39.594 -19.993 36.046 1.00 50.00 C ATOM 143 C TYR 15 -38.934 -18.625 36.255 1.00 50.00 C ATOM 144 O TYR 15 -39.320 -17.865 37.154 1.00 50.00 O ATOM 145 H TYR 15 -39.926 -20.211 38.085 1.00 50.00 H ATOM 146 CB TYR 15 -40.982 -19.855 35.417 1.00 50.00 C ATOM 147 CG TYR 15 -41.668 -21.176 35.153 1.00 50.00 C ATOM 148 HH TYR 15 -43.983 -25.037 35.121 1.00 50.00 H ATOM 149 OH TYR 15 -43.563 -24.808 34.442 1.00 50.00 O ATOM 150 CZ TYR 15 -42.935 -23.606 34.676 1.00 50.00 C ATOM 151 CD1 TYR 15 -42.442 -21.784 36.134 1.00 50.00 C ATOM 152 CE1 TYR 15 -43.073 -22.992 35.901 1.00 50.00 C ATOM 153 CD2 TYR 15 -41.541 -21.810 33.924 1.00 50.00 C ATOM 154 CE2 TYR 15 -42.165 -23.018 33.674 1.00 50.00 C ATOM 155 N THR 16 -38.018 -18.373 35.681 1.00 50.00 N ATOM 156 CA THR 16 -37.317 -17.069 35.754 1.00 50.00 C ATOM 157 C THR 16 -38.031 -16.039 34.859 1.00 50.00 C ATOM 158 O THR 16 -37.443 -15.521 33.893 1.00 50.00 O ATOM 159 H THR 16 -37.704 -19.024 35.144 1.00 50.00 H ATOM 160 CB THR 16 -35.841 -17.197 35.337 1.00 50.00 C ATOM 161 HG1 THR 16 -36.160 -17.321 33.489 1.00 50.00 H ATOM 162 OG1 THR 16 -35.758 -17.797 34.038 1.00 50.00 O ATOM 163 CG2 THR 16 -35.081 -18.071 36.324 1.00 50.00 C ATOM 164 N VAL 17 -39.256 -15.774 35.310 1.00 50.00 N ATOM 165 CA VAL 17 -40.211 -14.991 34.520 1.00 50.00 C ATOM 166 C VAL 17 -39.723 -13.575 34.163 1.00 50.00 C ATOM 167 O VAL 17 -40.145 -13.020 33.117 1.00 50.00 O ATOM 168 H VAL 17 -39.491 -16.087 36.120 1.00 50.00 H ATOM 169 CB VAL 17 -41.567 -14.862 35.240 1.00 50.00 C ATOM 170 CG1 VAL 17 -42.471 -13.887 34.502 1.00 50.00 C ATOM 171 CG2 VAL 17 -42.234 -16.222 35.367 1.00 50.00 C ATOM 172 N THR 18 -38.873 -13.092 34.995 1.00 50.00 N ATOM 173 CA THR 18 -38.452 -11.682 34.596 1.00 50.00 C ATOM 174 C THR 18 -37.756 -11.787 33.249 1.00 50.00 C ATOM 175 O THR 18 -37.917 -11.086 32.250 1.00 50.00 O ATOM 176 H THR 18 -38.526 -13.473 35.733 1.00 50.00 H ATOM 177 CB THR 18 -37.537 -11.044 35.657 1.00 50.00 C ATOM 178 HG1 THR 18 -38.476 -11.689 37.152 1.00 50.00 H ATOM 179 OG1 THR 18 -38.244 -10.933 36.898 1.00 50.00 O ATOM 180 CG2 THR 18 -37.101 -9.654 35.219 1.00 50.00 C ATOM 181 N ASP 19 -36.894 -12.852 33.172 1.00 50.00 N ATOM 182 CA ASP 19 -36.166 -13.189 32.007 1.00 50.00 C ATOM 183 C ASP 19 -37.122 -13.431 30.777 1.00 50.00 C ATOM 184 O ASP 19 -36.952 -12.765 29.816 1.00 50.00 O ATOM 185 H ASP 19 -36.805 -13.348 33.918 1.00 50.00 H ATOM 186 CB ASP 19 -35.309 -14.432 32.251 1.00 50.00 C ATOM 187 CG ASP 19 -34.139 -14.162 33.176 1.00 50.00 C ATOM 188 OD1 ASP 19 -33.830 -12.974 33.410 1.00 50.00 O ATOM 189 OD2 ASP 19 -33.531 -15.135 33.668 1.00 50.00 O ATOM 190 N ILE 20 -37.812 -14.482 31.079 1.00 50.00 N ATOM 191 CA ILE 20 -38.887 -14.851 30.135 1.00 50.00 C ATOM 192 C ILE 20 -39.862 -13.702 29.915 1.00 50.00 C ATOM 193 O ILE 20 -40.611 -13.638 28.903 1.00 50.00 O ATOM 194 H ILE 20 -37.669 -14.980 31.814 1.00 50.00 H ATOM 195 CB ILE 20 -39.658 -16.095 30.615 1.00 50.00 C ATOM 196 CD1 ILE 20 -41.011 -18.081 29.763 1.00 50.00 C ATOM 197 CG1 ILE 20 -40.457 -16.705 29.462 1.00 50.00 C ATOM 198 CG2 ILE 20 -40.547 -15.747 31.799 1.00 50.00 C ATOM 199 N LYS 21 -39.718 -12.784 30.814 1.00 50.00 N ATOM 200 CA LYS 21 -40.282 -11.434 30.933 1.00 50.00 C ATOM 201 C LYS 21 -40.043 -10.543 29.708 1.00 50.00 C ATOM 202 O LYS 21 -40.754 -9.512 29.522 1.00 50.00 O ATOM 203 H LYS 21 -39.161 -13.097 31.448 1.00 50.00 H ATOM 204 CB LYS 21 -39.717 -10.723 32.164 1.00 50.00 C ATOM 205 CD LYS 21 -39.761 -8.730 33.689 1.00 50.00 C ATOM 206 CE LYS 21 -40.344 -7.347 33.931 1.00 50.00 C ATOM 207 CG LYS 21 -40.309 -9.345 32.412 1.00 50.00 C ATOM 208 HZ1 LYS 21 -40.174 -5.925 35.288 1.00 50.00 H ATOM 209 HZ2 LYS 21 -38.929 -6.653 35.118 1.00 50.00 H ATOM 210 HZ3 LYS 21 -40.019 -7.245 35.875 1.00 50.00 H ATOM 211 NZ LYS 21 -39.814 -6.731 35.178 1.00 50.00 N ATOM 212 N ASP 22 -38.536 -10.850 29.197 1.00 50.00 N ATOM 213 CA ASP 22 -38.282 -9.949 28.029 1.00 50.00 C ATOM 214 C ASP 22 -38.847 -10.563 26.777 1.00 50.00 C ATOM 215 O ASP 22 -39.020 -9.889 25.736 1.00 50.00 O ATOM 216 CB ASP 22 -36.783 -9.682 27.875 1.00 50.00 C ATOM 217 CG ASP 22 -36.237 -8.781 28.965 1.00 50.00 C ATOM 218 OD1 ASP 22 -37.046 -8.144 29.670 1.00 50.00 O ATOM 219 OD2 ASP 22 -34.998 -8.713 29.112 1.00 50.00 O ATOM 220 N LEU 23 -39.108 -11.832 26.930 1.00 50.00 N ATOM 221 CA LEU 23 -39.673 -12.667 25.866 1.00 50.00 C ATOM 222 C LEU 23 -41.172 -12.878 25.924 1.00 50.00 C ATOM 223 O LEU 23 -41.852 -13.228 24.911 1.00 50.00 O ATOM 224 H LEU 23 -38.925 -12.191 27.735 1.00 50.00 H ATOM 225 CB LEU 23 -39.012 -14.047 25.860 1.00 50.00 C ATOM 226 CG LEU 23 -37.707 -14.169 25.072 1.00 50.00 C ATOM 227 CD1 LEU 23 -36.690 -13.144 25.550 1.00 50.00 C ATOM 228 CD2 LEU 23 -37.137 -15.575 25.191 1.00 50.00 C ATOM 229 N THR 24 -41.710 -12.666 27.136 1.00 50.00 N ATOM 230 CA THR 24 -43.137 -12.827 27.449 1.00 50.00 C ATOM 231 C THR 24 -43.937 -11.548 27.203 1.00 50.00 C ATOM 232 O THR 24 -45.154 -11.592 26.921 1.00 50.00 O ATOM 233 H THR 24 -41.135 -12.408 27.778 1.00 50.00 H ATOM 234 CB THR 24 -43.348 -13.265 28.910 1.00 50.00 C ATOM 235 HG1 THR 24 -43.039 -15.095 28.622 1.00 50.00 H ATOM 236 OG1 THR 24 -42.709 -14.528 29.130 1.00 50.00 O ATOM 237 CG2 THR 24 -44.831 -13.410 29.213 1.00 50.00 C ATOM 238 N LYS 25 -43.224 -10.436 27.310 1.00 50.00 N ATOM 239 CA LYS 25 -43.790 -9.097 27.103 1.00 50.00 C ATOM 240 C LYS 25 -43.849 -8.876 25.590 1.00 50.00 C ATOM 241 O LYS 25 -44.624 -8.032 25.091 1.00 50.00 O ATOM 242 H LYS 25 -42.353 -10.529 27.520 1.00 50.00 H ATOM 243 CB LYS 25 -42.944 -8.041 27.816 1.00 50.00 C ATOM 244 CD LYS 25 -40.752 -6.831 28.001 1.00 50.00 C ATOM 245 CE LYS 25 -41.349 -5.434 27.977 1.00 50.00 C ATOM 246 CG LYS 25 -41.584 -7.802 27.178 1.00 50.00 C ATOM 247 HZ1 LYS 25 -40.862 -3.644 28.649 1.00 50.00 H ATOM 248 HZ2 LYS 25 -39.687 -4.417 28.288 1.00 50.00 H ATOM 249 HZ3 LYS 25 -40.385 -4.694 29.532 1.00 50.00 H ATOM 250 NZ LYS 25 -40.484 -4.449 28.682 1.00 50.00 N ATOM 251 N LEU 26 -43.025 -9.649 24.899 1.00 50.00 N ATOM 252 CA LEU 26 -42.928 -9.610 23.433 1.00 50.00 C ATOM 253 C LEU 26 -44.058 -10.357 22.722 1.00 50.00 C ATOM 254 O LEU 26 -44.593 -9.890 21.695 1.00 50.00 O ATOM 255 H LEU 26 -42.510 -10.218 25.369 1.00 50.00 H ATOM 256 CB LEU 26 -41.591 -10.190 22.970 1.00 50.00 C ATOM 257 CG LEU 26 -41.253 -10.015 21.487 1.00 50.00 C ATOM 258 CD1 LEU 26 -39.765 -10.219 21.247 1.00 50.00 C ATOM 259 CD2 LEU 26 -42.064 -10.979 20.634 1.00 50.00 C ATOM 260 N GLY 27 -44.329 -11.613 23.334 1.00 50.00 N ATOM 261 CA GLY 27 -45.350 -12.359 22.809 1.00 50.00 C ATOM 262 C GLY 27 -46.602 -11.661 23.099 1.00 50.00 C ATOM 263 O GLY 27 -47.482 -11.755 22.248 1.00 50.00 O ATOM 264 H GLY 27 -43.861 -11.923 24.037 1.00 50.00 H ATOM 265 N ALA 28 -46.706 -11.187 24.350 1.00 50.00 N ATOM 266 CA ALA 28 -47.885 -10.530 24.796 1.00 50.00 C ATOM 267 C ALA 28 -48.221 -9.280 23.790 1.00 50.00 C ATOM 268 O ALA 28 -49.342 -8.915 23.529 1.00 50.00 O ATOM 269 H ALA 28 -46.010 -11.293 24.910 1.00 50.00 H ATOM 270 CB ALA 28 -47.714 -10.049 26.229 1.00 50.00 C ATOM 271 N ILE 29 -47.203 -8.622 23.297 1.00 50.00 N ATOM 272 CA ILE 29 -47.429 -7.398 22.517 1.00 50.00 C ATOM 273 C ILE 29 -47.421 -6.281 23.560 1.00 50.00 C ATOM 274 O ILE 29 -47.731 -5.109 23.252 1.00 50.00 O ATOM 275 H ILE 29 -46.365 -8.919 23.435 1.00 50.00 H ATOM 276 CB ILE 29 -48.738 -7.478 21.710 1.00 50.00 C ATOM 277 CD1 ILE 29 -49.967 -8.896 19.986 1.00 50.00 C ATOM 278 CG1 ILE 29 -48.645 -8.575 20.649 1.00 50.00 C ATOM 279 CG2 ILE 29 -49.069 -6.125 21.098 1.00 50.00 C ATOM 280 N TYR 30 -47.151 -6.615 24.767 1.00 50.00 N ATOM 281 CA TYR 30 -47.083 -5.532 25.804 1.00 50.00 C ATOM 282 C TYR 30 -45.752 -4.797 25.639 1.00 50.00 C ATOM 283 O TYR 30 -44.684 -5.425 25.479 1.00 50.00 O ATOM 284 H TYR 30 -47.004 -7.472 25.001 1.00 50.00 H ATOM 285 CB TYR 30 -47.232 -6.123 27.208 1.00 50.00 C ATOM 286 CG TYR 30 -47.214 -5.091 28.312 1.00 50.00 C ATOM 287 HH TYR 30 -46.435 -2.249 31.717 1.00 50.00 H ATOM 288 OH TYR 30 -47.178 -2.249 31.347 1.00 50.00 O ATOM 289 CZ TYR 30 -47.188 -3.190 30.343 1.00 50.00 C ATOM 290 CD1 TYR 30 -48.333 -4.315 28.580 1.00 50.00 C ATOM 291 CE1 TYR 30 -48.325 -3.369 29.588 1.00 50.00 C ATOM 292 CD2 TYR 30 -46.075 -4.897 29.084 1.00 50.00 C ATOM 293 CE2 TYR 30 -46.049 -3.955 30.096 1.00 50.00 C ATOM 294 N ASP 31 -45.855 -3.478 25.688 1.00 50.00 N ATOM 295 CA ASP 31 -44.701 -2.577 25.564 1.00 50.00 C ATOM 296 C ASP 31 -44.247 -1.957 26.887 1.00 50.00 C ATOM 297 O ASP 31 -45.079 -1.519 27.711 1.00 50.00 O ATOM 298 H ASP 31 -46.681 -3.138 25.804 1.00 50.00 H ATOM 299 CB ASP 31 -45.007 -1.446 24.579 1.00 50.00 C ATOM 300 CG ASP 31 -45.168 -1.942 23.156 1.00 50.00 C ATOM 301 OD1 ASP 31 -44.397 -2.836 22.746 1.00 50.00 O ATOM 302 OD2 ASP 31 -46.065 -1.437 22.449 1.00 50.00 O ATOM 303 N LYS 32 -42.748 -4.394 25.090 1.00 50.00 N ATOM 304 CA LYS 32 -42.595 -5.819 24.772 1.00 50.00 C ATOM 305 C LYS 32 -42.159 -6.054 23.362 1.00 50.00 C ATOM 306 O LYS 32 -41.510 -7.085 23.122 1.00 50.00 O ATOM 307 CB LYS 32 -43.906 -6.568 25.024 1.00 50.00 C ATOM 308 CD LYS 32 -43.317 -7.509 27.275 1.00 50.00 C ATOM 309 CE LYS 32 -43.771 -7.689 28.715 1.00 50.00 C ATOM 310 CG LYS 32 -44.299 -6.655 26.489 1.00 50.00 C ATOM 311 HZ1 LYS 32 -44.004 -6.550 30.309 1.00 50.00 H ATOM 312 HZ2 LYS 32 -44.272 -5.817 29.083 1.00 50.00 H ATOM 313 HZ3 LYS 32 -42.901 -6.092 29.480 1.00 50.00 H ATOM 314 NZ LYS 32 -43.733 -6.409 29.473 1.00 50.00 N ATOM 315 N THR 33 -42.591 -5.194 22.433 1.00 50.00 N ATOM 316 CA THR 33 -42.234 -5.357 21.050 1.00 50.00 C ATOM 317 C THR 33 -40.707 -5.387 20.865 1.00 50.00 C ATOM 318 O THR 33 -40.146 -5.702 19.775 1.00 50.00 O ATOM 319 H THR 33 -43.112 -4.505 22.685 1.00 50.00 H ATOM 320 CB THR 33 -42.829 -4.236 20.178 1.00 50.00 C ATOM 321 HG1 THR 33 -41.521 -2.947 20.581 1.00 50.00 H ATOM 322 OG1 THR 33 -42.349 -2.965 20.635 1.00 50.00 O ATOM 323 CG2 THR 33 -44.347 -4.241 20.265 1.00 50.00 C ATOM 324 N LYS 34 -40.005 -4.977 21.876 1.00 50.00 N ATOM 325 CA LYS 34 -38.569 -4.896 21.968 1.00 50.00 C ATOM 326 C LYS 34 -37.956 -6.261 21.609 1.00 50.00 C ATOM 327 O LYS 34 -36.840 -6.344 21.101 1.00 50.00 O ATOM 328 H LYS 34 -40.515 -4.725 22.573 1.00 50.00 H ATOM 329 CB LYS 34 -38.146 -4.456 23.370 1.00 50.00 C ATOM 330 CD LYS 34 -37.153 -6.272 24.790 1.00 50.00 C ATOM 331 CE LYS 34 -37.373 -7.178 25.992 1.00 50.00 C ATOM 332 CG LYS 34 -38.413 -5.491 24.452 1.00 50.00 C ATOM 333 HZ1 LYS 34 -36.297 -8.437 27.066 1.00 50.00 H ATOM 334 HZ2 LYS 34 -35.491 -7.337 26.565 1.00 50.00 H ATOM 335 HZ3 LYS 34 -35.873 -8.422 25.677 1.00 50.00 H ATOM 336 NZ LYS 34 -36.134 -7.918 26.362 1.00 50.00 N ATOM 337 N LYS 35 -38.766 -7.295 21.946 1.00 50.00 N ATOM 338 CA LYS 35 -38.245 -8.661 21.604 1.00 50.00 C ATOM 339 C LYS 35 -39.014 -9.209 20.397 1.00 50.00 C ATOM 340 O LYS 35 -39.139 -10.469 20.270 1.00 50.00 O ATOM 341 H LYS 35 -39.567 -7.206 22.349 1.00 50.00 H ATOM 342 CB LYS 35 -38.370 -9.599 22.807 1.00 50.00 C ATOM 343 CD LYS 35 -36.334 -11.011 22.408 1.00 50.00 C ATOM 344 CE LYS 35 -35.803 -12.425 22.240 1.00 50.00 C ATOM 345 CG LYS 35 -37.847 -11.004 22.555 1.00 50.00 C ATOM 346 HZ1 LYS 35 -34.051 -13.285 21.946 1.00 50.00 H ATOM 347 HZ2 LYS 35 -33.927 -12.079 22.746 1.00 50.00 H ATOM 348 HZ3 LYS 35 -34.121 -11.980 21.310 1.00 50.00 H ATOM 349 NZ LYS 35 -34.327 -12.444 22.041 1.00 50.00 N ATOM 350 N TYR 36 -37.364 -7.991 16.660 1.00 50.00 N ATOM 351 CA TYR 36 -37.769 -7.017 17.738 1.00 50.00 C ATOM 352 C TYR 36 -37.141 -5.640 17.679 1.00 50.00 C ATOM 353 O TYR 36 -37.458 -4.689 18.282 1.00 50.00 O ATOM 354 CB TYR 36 -37.462 -7.591 19.122 1.00 50.00 C ATOM 355 CG TYR 36 -35.988 -7.626 19.458 1.00 50.00 C ATOM 356 HH TYR 36 -31.656 -6.926 20.463 1.00 50.00 H ATOM 357 OH TYR 36 -31.934 -7.705 20.379 1.00 50.00 O ATOM 358 CZ TYR 36 -33.276 -7.680 20.075 1.00 50.00 C ATOM 359 CD1 TYR 36 -35.275 -6.450 19.650 1.00 50.00 C ATOM 360 CE1 TYR 36 -33.927 -6.472 19.957 1.00 50.00 C ATOM 361 CD2 TYR 36 -35.315 -8.835 19.580 1.00 50.00 C ATOM 362 CE2 TYR 36 -33.968 -8.876 19.887 1.00 50.00 C ATOM 363 N TRP 37 -35.977 -5.511 16.846 1.00 50.00 N ATOM 364 CA TRP 37 -35.391 -4.155 16.538 1.00 50.00 C ATOM 365 C TRP 37 -36.530 -3.319 15.712 1.00 50.00 C ATOM 366 O TRP 37 -37.058 -3.829 14.765 1.00 50.00 O ATOM 367 H TRP 37 -35.597 -6.254 16.507 1.00 50.00 H ATOM 368 CB TRP 37 -34.090 -4.301 15.746 1.00 50.00 C ATOM 369 HB2 TRP 37 -34.275 -4.451 14.739 1.00 50.00 H ATOM 370 HB3 TRP 37 -33.316 -4.688 16.247 1.00 50.00 H ATOM 371 CG TRP 37 -33.415 -2.996 15.456 1.00 50.00 C ATOM 372 CD1 TRP 37 -33.271 -2.401 14.236 1.00 50.00 C ATOM 373 HE1 TRP 37 -32.384 -0.634 13.658 1.00 50.00 H ATOM 374 NE1 TRP 37 -32.596 -1.211 14.365 1.00 50.00 N ATOM 375 CD2 TRP 37 -32.792 -2.122 16.405 1.00 50.00 C ATOM 376 CE2 TRP 37 -32.293 -1.019 15.689 1.00 50.00 C ATOM 377 CH2 TRP 37 -31.456 -0.034 17.666 1.00 50.00 C ATOM 378 CZ2 TRP 37 -31.620 0.033 16.311 1.00 50.00 C ATOM 379 CE3 TRP 37 -32.609 -2.164 17.790 1.00 50.00 C ATOM 380 CZ3 TRP 37 -31.943 -1.119 18.402 1.00 50.00 C ATOM 381 N VAL 38 -36.424 -1.971 16.353 1.00 50.00 N ATOM 382 CA VAL 38 -37.508 -1.188 15.488 1.00 50.00 C ATOM 383 C VAL 38 -37.123 -0.847 14.059 1.00 50.00 C ATOM 384 O VAL 38 -38.030 -0.642 13.297 1.00 50.00 O ATOM 385 H VAL 38 -35.975 -1.543 17.005 1.00 50.00 H ATOM 386 CB VAL 38 -37.919 0.135 16.160 1.00 50.00 C ATOM 387 CG1 VAL 38 -38.538 -0.131 17.524 1.00 50.00 C ATOM 388 CG2 VAL 38 -36.721 1.062 16.288 1.00 50.00 C ATOM 389 N TYR 39 -35.790 -0.757 13.807 1.00 50.00 N ATOM 390 CA TYR 39 -35.237 -0.466 12.478 1.00 50.00 C ATOM 391 C TYR 39 -35.901 -1.378 11.447 1.00 50.00 C ATOM 392 O TYR 39 -35.811 -2.622 11.532 1.00 50.00 O ATOM 393 H TYR 39 -35.237 -0.886 14.506 1.00 50.00 H ATOM 394 CB TYR 39 -33.718 -0.649 12.478 1.00 50.00 C ATOM 395 CG TYR 39 -33.064 -0.343 11.149 1.00 50.00 C ATOM 396 HH TYR 39 -31.220 1.338 7.403 1.00 50.00 H ATOM 397 OH TYR 39 -31.268 0.516 7.499 1.00 50.00 O ATOM 398 CZ TYR 39 -31.862 0.229 8.707 1.00 50.00 C ATOM 399 CD1 TYR 39 -32.862 0.970 10.742 1.00 50.00 C ATOM 400 CE1 TYR 39 -32.264 1.259 9.530 1.00 50.00 C ATOM 401 CD2 TYR 39 -32.652 -1.367 10.307 1.00 50.00 C ATOM 402 CE2 TYR 39 -32.054 -1.096 9.091 1.00 50.00 C ATOM 403 N GLN 40 -36.550 -0.732 10.492 1.00 50.00 N ATOM 404 CA GLN 40 -37.250 -1.412 9.393 1.00 50.00 C ATOM 405 C GLN 40 -38.761 -1.569 9.568 1.00 50.00 C ATOM 406 O GLN 40 -39.525 -1.593 8.579 1.00 50.00 O ATOM 407 H GLN 40 -36.551 0.168 10.537 1.00 50.00 H ATOM 408 CB GLN 40 -36.664 -2.807 9.166 1.00 50.00 C ATOM 409 CD GLN 40 -34.673 -4.200 8.474 1.00 50.00 C ATOM 410 CG GLN 40 -35.234 -2.801 8.650 1.00 50.00 C ATOM 411 OE1 GLN 40 -35.404 -5.135 8.146 1.00 50.00 O ATOM 412 HE21 GLN 40 -32.988 -5.154 8.600 1.00 50.00 H ATOM 413 HE22 GLN 40 -32.872 -3.635 8.929 1.00 50.00 H ATOM 414 NE2 GLN 40 -33.371 -4.345 8.692 1.00 50.00 N ATOM 415 N GLY 41 -38.900 -1.714 10.967 1.00 50.00 N ATOM 416 CA GLY 41 -40.218 -2.147 11.459 1.00 50.00 C ATOM 417 C GLY 41 -40.063 -1.660 12.901 1.00 50.00 C ATOM 418 O GLY 41 -38.970 -1.748 13.485 1.00 50.00 O ATOM 419 H GLY 41 -38.233 -1.555 11.549 1.00 50.00 H ATOM 420 N LYS 42 -41.122 -1.405 13.544 1.00 50.00 N ATOM 421 CA LYS 42 -41.134 -0.957 14.942 1.00 50.00 C ATOM 422 C LYS 42 -41.521 -2.032 15.959 1.00 50.00 C ATOM 423 O LYS 42 -42.698 -2.437 16.053 1.00 50.00 O ATOM 424 H LYS 42 -41.896 -1.512 13.099 1.00 50.00 H ATOM 425 CB LYS 42 -42.089 0.225 15.117 1.00 50.00 C ATOM 426 CD LYS 42 -42.670 2.605 14.568 1.00 50.00 C ATOM 427 CE LYS 42 -42.259 3.852 13.804 1.00 50.00 C ATOM 428 CG LYS 42 -41.669 1.478 14.366 1.00 50.00 C ATOM 429 HZ1 LYS 42 -42.951 5.683 13.547 1.00 50.00 H ATOM 430 HZ2 LYS 42 -43.260 5.174 14.872 1.00 50.00 H ATOM 431 HZ3 LYS 42 -44.028 4.723 13.724 1.00 50.00 H ATOM 432 NZ LYS 42 -43.221 4.970 14.008 1.00 50.00 N ATOM 433 N PRO 43 -40.416 -2.581 16.553 1.00 50.00 N ATOM 434 CA PRO 43 -40.567 -3.425 17.827 1.00 50.00 C ATOM 435 C PRO 43 -39.547 -2.744 18.756 1.00 50.00 C ATOM 436 O PRO 43 -38.336 -2.985 18.774 1.00 50.00 O ATOM 437 CB PRO 43 -40.206 -4.843 17.377 1.00 50.00 C ATOM 438 CD PRO 43 -40.100 -3.479 15.412 1.00 50.00 C ATOM 439 CG PRO 43 -40.475 -4.848 15.909 1.00 50.00 C ATOM 440 N VAL 44 -40.078 -1.649 19.255 1.00 50.00 N ATOM 441 CA VAL 44 -39.312 -0.678 20.042 1.00 50.00 C ATOM 442 C VAL 44 -38.932 -1.551 21.269 1.00 50.00 C ATOM 443 O VAL 44 -39.777 -2.390 21.660 1.00 50.00 O ATOM 444 H VAL 44 -40.952 -1.509 19.095 1.00 50.00 H ATOM 445 CB VAL 44 -40.145 0.579 20.355 1.00 50.00 C ATOM 446 CG1 VAL 44 -41.276 0.241 21.316 1.00 50.00 C ATOM 447 CG2 VAL 44 -39.262 1.674 20.932 1.00 50.00 C ATOM 448 N MET 45 -37.774 -1.089 21.814 1.00 50.00 N ATOM 449 CA MET 45 -37.164 -1.798 22.945 1.00 50.00 C ATOM 450 C MET 45 -36.837 -0.926 24.142 1.00 50.00 C ATOM 451 O MET 45 -37.138 -1.296 25.329 1.00 50.00 O ATOM 452 H MET 45 -37.382 -0.349 21.482 1.00 50.00 H ATOM 453 CB MET 45 -35.879 -2.503 22.506 1.00 50.00 C ATOM 454 SD MET 45 -34.555 -4.391 20.971 1.00 50.00 S ATOM 455 CE MET 45 -34.058 -5.260 22.457 1.00 50.00 C ATOM 456 CG MET 45 -36.098 -3.636 21.518 1.00 50.00 C ATOM 457 N PRO 46 -36.298 0.126 23.754 1.00 50.00 N ATOM 458 CA PRO 46 -35.877 1.121 24.737 1.00 50.00 C ATOM 459 C PRO 46 -34.354 1.031 24.915 1.00 50.00 C ATOM 460 O PRO 46 -33.860 0.481 25.890 1.00 50.00 O ATOM 461 CB PRO 46 -36.638 0.732 26.006 1.00 50.00 C ATOM 462 CD PRO 46 -37.380 -0.785 24.309 1.00 50.00 C ATOM 463 CG PRO 46 -37.837 -0.006 25.512 1.00 50.00 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 296 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 75.42 58.8 68 100.0 68 ARMSMC SECONDARY STRUCTURE . . 61.37 79.4 34 100.0 34 ARMSMC SURFACE . . . . . . . . 76.03 57.1 56 100.0 56 ARMSMC BURIED . . . . . . . . 72.47 66.7 12 100.0 12 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.16 53.1 32 100.0 32 ARMSSC1 RELIABLE SIDE CHAINS . 80.06 55.2 29 100.0 29 ARMSSC1 SECONDARY STRUCTURE . . 80.75 58.8 17 100.0 17 ARMSSC1 SURFACE . . . . . . . . 80.55 55.6 27 100.0 27 ARMSSC1 BURIED . . . . . . . . 90.38 40.0 5 100.0 5 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 78.07 56.0 25 100.0 25 ARMSSC2 RELIABLE SIDE CHAINS . 64.45 66.7 21 100.0 21 ARMSSC2 SECONDARY STRUCTURE . . 66.30 76.9 13 100.0 13 ARMSSC2 SURFACE . . . . . . . . 67.94 63.6 22 100.0 22 ARMSSC2 BURIED . . . . . . . . 130.19 0.0 3 100.0 3 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 68.64 62.5 8 100.0 8 ARMSSC3 RELIABLE SIDE CHAINS . 71.02 71.4 7 100.0 7 ARMSSC3 SECONDARY STRUCTURE . . 93.99 50.0 2 100.0 2 ARMSSC3 SURFACE . . . . . . . . 68.64 62.5 8 100.0 8 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 69.14 66.7 6 100.0 6 ARMSSC4 RELIABLE SIDE CHAINS . 69.14 66.7 6 100.0 6 ARMSSC4 SECONDARY STRUCTURE . . 90.25 50.0 2 100.0 2 ARMSSC4 SURFACE . . . . . . . . 69.14 66.7 6 100.0 6 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 9.73 (Number of atoms: 35) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 9.73 35 100.0 35 CRMSCA CRN = ALL/NP . . . . . 0.2780 CRMSCA SECONDARY STRUCTURE . . 7.89 17 100.0 17 CRMSCA SURFACE . . . . . . . . 10.02 29 100.0 29 CRMSCA BURIED . . . . . . . . 8.17 6 100.0 6 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 9.71 173 100.0 173 CRMSMC SECONDARY STRUCTURE . . 8.16 85 100.0 85 CRMSMC SURFACE . . . . . . . . 10.00 143 100.0 143 CRMSMC BURIED . . . . . . . . 8.21 30 100.0 30 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.16 156 100.0 156 CRMSSC RELIABLE SIDE CHAINS . 12.02 136 100.0 136 CRMSSC SECONDARY STRUCTURE . . 11.02 84 100.0 84 CRMSSC SURFACE . . . . . . . . 11.87 127 100.0 127 CRMSSC BURIED . . . . . . . . 13.34 29 100.0 29 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.01 296 100.0 296 CRMSALL SECONDARY STRUCTURE . . 9.83 152 100.0 152 CRMSALL SURFACE . . . . . . . . 10.96 243 100.0 243 CRMSALL BURIED . . . . . . . . 11.24 53 100.0 53 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 41.087 0.704 0.746 35 100.0 35 ERRCA SECONDARY STRUCTURE . . 42.485 0.742 0.773 17 100.0 17 ERRCA SURFACE . . . . . . . . 40.924 0.701 0.744 29 100.0 29 ERRCA BURIED . . . . . . . . 41.872 0.721 0.755 6 100.0 6 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 41.086 0.704 0.746 173 100.0 173 ERRMC SECONDARY STRUCTURE . . 42.235 0.734 0.767 85 100.0 85 ERRMC SURFACE . . . . . . . . 40.909 0.700 0.743 143 100.0 143 ERRMC BURIED . . . . . . . . 41.932 0.723 0.758 30 100.0 30 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 38.886 0.647 0.705 156 100.0 156 ERRSC RELIABLE SIDE CHAINS . 38.959 0.648 0.706 136 100.0 136 ERRSC SECONDARY STRUCTURE . . 40.133 0.681 0.731 84 100.0 84 ERRSC SURFACE . . . . . . . . 39.235 0.657 0.712 127 100.0 127 ERRSC BURIED . . . . . . . . 37.357 0.604 0.673 29 100.0 29 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 39.978 0.675 0.725 296 100.0 296 ERRALL SECONDARY STRUCTURE . . 41.073 0.705 0.747 152 100.0 152 ERRALL SURFACE . . . . . . . . 40.080 0.678 0.728 243 100.0 243 ERRALL BURIED . . . . . . . . 39.511 0.660 0.713 53 100.0 53 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 4 25 35 35 DISTCA CA (P) 0.00 0.00 0.00 11.43 71.43 35 DISTCA CA (RMS) 0.00 0.00 0.00 3.87 7.26 DISTCA ALL (N) 0 1 2 29 180 296 296 DISTALL ALL (P) 0.00 0.34 0.68 9.80 60.81 296 DISTALL ALL (RMS) 0.00 1.81 2.09 3.85 7.27 DISTALL END of the results output