####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 31 ( 260), selected 31 , name T0548TS173_1-D1 # Molecule2: number of CA atoms 35 ( 296), selected 31 , name T0548-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0548TS173_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 16 - 31 4.65 15.24 LONGEST_CONTINUOUS_SEGMENT: 16 31 - 46 4.58 15.33 LCS_AVERAGE: 45.71 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 36 - 46 1.80 14.84 LCS_AVERAGE: 25.07 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 17 - 24 0.31 14.15 LCS_AVERAGE: 15.48 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 31 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT T 16 T 16 3 9 16 0 3 3 3 3 7 9 9 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT V 17 V 17 8 9 16 8 8 8 8 8 9 10 10 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT T 18 T 18 8 9 16 8 8 8 8 8 9 10 10 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT D 19 D 19 8 9 16 8 8 8 8 9 9 10 10 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT I 20 I 20 8 9 16 8 8 8 8 9 9 9 10 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT K 21 K 21 8 9 16 8 8 8 8 8 8 9 10 11 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT D 22 D 22 8 9 16 8 8 8 8 8 8 10 10 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT L 23 L 23 8 9 16 8 8 8 8 8 8 9 9 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT T 24 T 24 8 9 16 8 8 8 8 8 8 9 9 11 12 13 16 17 18 19 22 23 24 24 24 LCS_GDT K 25 K 25 3 5 16 3 4 4 5 5 7 8 9 11 14 14 16 17 18 19 20 21 22 23 24 LCS_GDT L 26 L 26 3 5 16 0 4 4 5 5 7 8 9 11 12 13 14 16 16 18 20 21 22 23 24 LCS_GDT G 27 G 27 3 5 16 3 3 3 3 6 7 8 9 11 12 13 16 17 18 19 20 21 22 23 24 LCS_GDT A 28 A 28 3 5 16 3 3 3 4 6 7 9 10 11 12 13 16 17 18 19 20 21 22 23 24 LCS_GDT I 29 I 29 3 7 16 3 3 3 5 9 9 9 10 11 12 13 16 17 18 19 20 21 22 23 24 LCS_GDT Y 30 Y 30 3 7 16 3 3 3 5 9 9 9 10 11 12 13 16 19 20 22 23 23 24 24 24 LCS_GDT D 31 D 31 4 7 16 3 4 4 5 9 9 9 10 10 11 13 16 17 18 21 23 23 24 24 24 LCS_GDT K 32 K 32 5 7 16 3 4 5 5 9 9 10 10 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT T 33 T 33 5 7 16 3 4 5 5 9 9 9 10 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT K 34 K 34 5 7 16 3 4 5 5 9 9 9 10 11 12 13 18 20 21 22 23 23 24 24 24 LCS_GDT K 35 K 35 5 8 16 3 4 5 5 9 9 10 10 12 13 14 18 20 21 22 23 23 24 24 24 LCS_GDT Y 36 Y 36 5 11 16 4 5 6 8 9 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT W 37 W 37 5 11 16 4 5 6 9 10 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT V 38 V 38 5 11 16 4 5 7 9 10 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT Y 39 Y 39 6 11 16 4 5 7 9 10 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT Q 40 Q 40 6 11 16 4 5 7 8 10 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT G 41 G 41 6 11 16 3 5 7 9 10 11 11 11 12 14 14 17 20 21 22 23 23 24 24 24 LCS_GDT K 42 K 42 6 11 16 4 5 7 9 10 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT P 43 P 43 6 11 16 4 5 7 9 10 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT V 44 V 44 6 11 16 4 5 7 9 10 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 LCS_GDT M 45 M 45 5 11 16 4 5 7 9 10 11 11 11 12 14 14 16 17 18 19 20 21 22 23 24 LCS_GDT P 46 P 46 3 11 16 0 3 5 9 10 11 11 11 12 14 14 16 17 18 19 20 21 22 23 24 LCS_AVERAGE LCS_A: 28.76 ( 15.48 25.07 45.71 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 8 8 9 10 11 11 11 12 14 14 18 20 21 22 23 23 24 24 24 GDT PERCENT_AT 22.86 22.86 22.86 25.71 28.57 31.43 31.43 31.43 34.29 40.00 40.00 51.43 57.14 60.00 62.86 65.71 65.71 68.57 68.57 68.57 GDT RMS_LOCAL 0.31 0.31 0.31 1.32 1.53 1.80 1.80 1.80 3.08 3.57 3.43 4.60 4.83 4.95 5.15 5.38 5.38 5.62 5.62 5.62 GDT RMS_ALL_AT 14.15 14.15 14.15 14.71 14.56 14.84 14.84 14.84 9.80 9.31 9.75 9.37 9.33 9.33 9.18 9.09 9.09 9.03 9.03 9.03 # Checking swapping # possible swapping detected: D 31 D 31 # possible swapping detected: Y 36 Y 36 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA T 16 T 16 16.996 0 0.245 0.410 20.422 0.000 0.000 LGA V 17 V 17 22.313 0 0.585 0.658 26.644 0.000 0.000 LGA T 18 T 18 22.449 0 0.043 0.137 24.053 0.000 0.000 LGA D 19 D 19 20.164 0 0.062 0.133 21.227 0.000 0.000 LGA I 20 I 20 18.420 0 0.035 0.066 19.096 0.000 0.000 LGA K 21 K 21 19.320 0 0.014 1.131 25.918 0.000 0.000 LGA D 22 D 22 19.248 0 0.014 0.126 21.340 0.000 0.000 LGA L 23 L 23 16.824 0 0.312 0.414 17.758 0.000 0.000 LGA T 24 T 24 16.040 0 0.344 0.326 17.724 0.000 0.000 LGA K 25 K 25 21.505 0 0.658 1.065 30.867 0.000 0.000 LGA L 26 L 26 21.078 0 0.662 1.479 23.967 0.000 0.000 LGA G 27 G 27 24.170 0 0.672 0.672 24.170 0.000 0.000 LGA A 28 A 28 23.530 0 0.164 0.207 23.958 0.000 0.000 LGA I 29 I 29 21.169 0 0.025 1.119 26.241 0.000 0.000 LGA Y 30 Y 30 14.891 0 0.367 1.243 17.434 0.000 0.000 LGA D 31 D 31 13.176 0 0.353 1.114 17.283 0.000 0.000 LGA K 32 K 32 9.566 0 0.130 1.061 11.041 0.119 3.228 LGA T 33 T 33 15.150 0 0.066 0.660 19.911 0.000 0.000 LGA K 34 K 34 13.353 0 0.680 1.020 21.022 0.119 0.053 LGA K 35 K 35 9.192 0 0.568 0.857 18.306 7.976 3.545 LGA Y 36 Y 36 2.967 0 0.343 1.273 11.568 53.214 28.968 LGA W 37 W 37 0.305 0 0.118 0.317 3.361 95.357 81.054 LGA V 38 V 38 0.787 0 0.119 0.192 1.581 86.190 82.925 LGA Y 39 Y 39 1.109 0 0.075 0.177 3.566 75.476 66.786 LGA Q 40 Q 40 2.301 0 0.319 0.784 9.029 75.238 41.429 LGA G 41 G 41 2.368 0 0.032 0.032 3.727 61.667 61.667 LGA K 42 K 42 1.624 0 0.122 1.034 7.721 79.286 56.508 LGA P 43 P 43 1.177 0 0.063 0.285 1.734 85.952 81.565 LGA V 44 V 44 0.678 0 0.011 0.037 1.669 86.190 88.095 LGA M 45 M 45 2.345 0 0.095 0.592 5.803 68.810 50.595 LGA P 46 P 46 2.020 0 0.647 0.597 3.420 63.333 68.639 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 31 124 124 100.00 253 253 100.00 35 SUMMARY(RMSD_GDC): 8.579 8.517 9.370 23.969 20.430 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 31 35 4.0 11 1.80 36.429 33.260 0.578 LGA_LOCAL RMSD: 1.802 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.841 Number of assigned atoms: 31 Std_ASGN_ATOMS RMSD: 8.579 Standard rmsd on all 31 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.991943 * X + -0.125783 * Y + -0.015093 * Z + 43.790543 Y_new = 0.115633 * X + 0.850285 * Y + 0.513463 * Z + -13.300582 Z_new = -0.051751 * X + -0.511072 * Y + 0.857979 * Z + 99.043365 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.116048 0.051774 -0.537229 [DEG: 6.6491 2.9664 -30.7810 ] ZXZ: -3.112206 0.539474 -3.040677 [DEG: -178.3163 30.9096 -174.2179 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0548TS173_1-D1 REMARK 2: T0548-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0548TS173_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 31 35 4.0 11 1.80 33.260 8.58 REMARK ---------------------------------------------------------- MOLECULE T0548TS173_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0548 REMARK MODEL 1 REMARK PARENT N/A ATOM 1 N THR 16 -36.539 -32.933 37.360 1.00 0.00 N ATOM 2 CA THR 16 -37.880 -33.501 37.331 1.00 0.00 C ATOM 3 C THR 16 -38.035 -34.491 36.184 1.00 0.00 C ATOM 4 O THR 16 -37.278 -35.456 36.077 1.00 0.00 O ATOM 5 CB THR 16 -38.954 -32.405 37.200 1.00 0.00 C ATOM 6 OG1 THR 16 -38.742 -31.666 35.990 1.00 0.00 O ATOM 7 CG2 THR 16 -38.896 -31.456 38.387 1.00 0.00 C ATOM 8 H1 THR 16 -36.412 -31.945 37.267 1.00 0.00 H ATOM 9 H2 THR 16 -35.960 -33.058 38.165 1.00 0.00 H ATOM 10 H3 THR 16 -35.864 -33.210 36.677 1.00 0.00 H ATOM 17 N VAL 17 -39.021 -34.246 35.327 1.00 0.00 N ATOM 18 CA VAL 17 -39.288 -35.127 34.196 1.00 0.00 C ATOM 19 C VAL 17 -39.278 -34.355 32.882 1.00 0.00 C ATOM 20 O VAL 17 -39.919 -33.311 32.760 1.00 0.00 O ATOM 21 CB VAL 17 -40.641 -35.846 34.347 1.00 0.00 C ATOM 22 CG1 VAL 17 -40.893 -36.762 33.159 1.00 0.00 C ATOM 23 CG2 VAL 17 -40.681 -36.638 35.646 1.00 0.00 C ATOM 33 N THR 18 -38.547 -34.874 31.902 1.00 0.00 N ATOM 34 CA THR 18 -38.392 -34.197 30.620 1.00 0.00 C ATOM 35 C THR 18 -39.745 -33.805 30.039 1.00 0.00 C ATOM 36 O THR 18 -39.901 -32.714 29.489 1.00 0.00 O ATOM 37 CB THR 18 -37.643 -35.077 29.603 1.00 0.00 C ATOM 38 OG1 THR 18 -36.329 -35.370 30.096 1.00 0.00 O ATOM 39 CG2 THR 18 -37.531 -34.366 28.263 1.00 0.00 C ATOM 47 N ASP 19 -40.718 -34.700 30.162 1.00 0.00 N ATOM 48 CA ASP 19 -42.061 -34.446 29.654 1.00 0.00 C ATOM 49 C ASP 19 -42.660 -33.194 30.284 1.00 0.00 C ATOM 50 O ASP 19 -43.330 -32.409 29.611 1.00 0.00 O ATOM 51 CB ASP 19 -42.969 -35.651 29.913 1.00 0.00 C ATOM 52 CG ASP 19 -42.683 -36.855 29.027 1.00 0.00 C ATOM 53 OD1 ASP 19 -41.962 -36.706 28.068 1.00 0.00 O ATOM 54 OD2 ASP 19 -43.054 -37.943 29.398 1.00 0.00 O ATOM 59 N ILE 20 -42.417 -33.013 31.577 1.00 0.00 N ATOM 60 CA ILE 20 -42.957 -31.872 32.307 1.00 0.00 C ATOM 61 C ILE 20 -42.474 -30.557 31.709 1.00 0.00 C ATOM 62 O ILE 20 -43.265 -29.646 31.468 1.00 0.00 O ATOM 63 CB ILE 20 -42.572 -31.920 33.796 1.00 0.00 C ATOM 64 CG1 ILE 20 -43.296 -33.072 34.498 1.00 0.00 C ATOM 65 CG2 ILE 20 -42.892 -30.596 34.472 1.00 0.00 C ATOM 66 CD1 ILE 20 -42.798 -33.343 35.900 1.00 0.00 C ATOM 78 N LYS 21 -41.169 -30.465 31.472 1.00 0.00 N ATOM 79 CA LYS 21 -40.579 -29.267 30.885 1.00 0.00 C ATOM 80 C LYS 21 -41.068 -29.054 29.459 1.00 0.00 C ATOM 81 O LYS 21 -41.403 -27.934 29.069 1.00 0.00 O ATOM 82 CB LYS 21 -39.052 -29.354 30.912 1.00 0.00 C ATOM 83 CG LYS 21 -38.440 -29.253 32.303 1.00 0.00 C ATOM 84 CD LYS 21 -36.921 -29.241 32.238 1.00 0.00 C ATOM 85 CE LYS 21 -36.369 -30.616 31.889 1.00 0.00 C ATOM 86 NZ LYS 21 -34.895 -30.591 31.694 1.00 0.00 N ATOM 100 N ASP 22 -41.104 -30.132 28.685 1.00 0.00 N ATOM 101 CA ASP 22 -41.501 -30.056 27.284 1.00 0.00 C ATOM 102 C ASP 22 -42.961 -29.644 27.147 1.00 0.00 C ATOM 103 O ASP 22 -43.345 -28.996 26.173 1.00 0.00 O ATOM 104 CB ASP 22 -41.266 -31.397 26.585 1.00 0.00 C ATOM 105 CG ASP 22 -39.805 -31.702 26.284 1.00 0.00 C ATOM 106 OD1 ASP 22 -38.991 -30.822 26.436 1.00 0.00 O ATOM 107 OD2 ASP 22 -39.492 -32.847 26.058 1.00 0.00 O ATOM 112 N LEU 23 -43.772 -30.023 28.128 1.00 0.00 N ATOM 113 CA LEU 23 -45.195 -29.705 28.113 1.00 0.00 C ATOM 114 C LEU 23 -45.493 -28.471 28.955 1.00 0.00 C ATOM 115 O LEU 23 -46.649 -28.187 29.270 1.00 0.00 O ATOM 116 CB LEU 23 -46.011 -30.904 28.613 1.00 0.00 C ATOM 117 CG LEU 23 -45.867 -32.185 27.781 1.00 0.00 C ATOM 118 CD1 LEU 23 -46.636 -33.323 28.438 1.00 0.00 C ATOM 119 CD2 LEU 23 -46.376 -31.935 26.369 1.00 0.00 C ATOM 131 N THR 24 -44.444 -27.741 29.318 1.00 0.00 N ATOM 132 CA THR 24 -44.600 -26.477 30.027 1.00 0.00 C ATOM 133 C THR 24 -45.459 -26.647 31.273 1.00 0.00 C ATOM 134 O THR 24 -46.179 -25.730 31.673 1.00 0.00 O ATOM 135 CB THR 24 -45.228 -25.397 29.126 1.00 0.00 C ATOM 136 OG1 THR 24 -46.518 -25.836 28.679 1.00 0.00 O ATOM 137 CG2 THR 24 -44.343 -25.129 27.919 1.00 0.00 C ATOM 145 N LYS 25 -45.381 -27.824 31.883 1.00 0.00 N ATOM 146 CA LYS 25 -46.159 -28.119 33.081 1.00 0.00 C ATOM 147 C LYS 25 -45.451 -27.620 34.335 1.00 0.00 C ATOM 148 O LYS 25 -44.227 -27.503 34.362 1.00 0.00 O ATOM 149 CB LYS 25 -46.426 -29.621 33.191 1.00 0.00 C ATOM 150 CG LYS 25 -47.395 -30.165 32.150 1.00 0.00 C ATOM 151 CD LYS 25 -47.593 -31.665 32.310 1.00 0.00 C ATOM 152 CE LYS 25 -48.657 -32.189 31.356 1.00 0.00 C ATOM 153 NZ LYS 25 -48.858 -33.657 31.497 1.00 0.00 N ATOM 167 N LEU 26 -46.231 -27.328 35.371 1.00 0.00 N ATOM 168 CA LEU 26 -45.685 -26.795 36.613 1.00 0.00 C ATOM 169 C LEU 26 -45.827 -27.796 37.752 1.00 0.00 C ATOM 170 O LEU 26 -46.708 -28.655 37.730 1.00 0.00 O ATOM 171 CB LEU 26 -46.378 -25.475 36.973 1.00 0.00 C ATOM 172 CG LEU 26 -46.377 -24.413 35.867 1.00 0.00 C ATOM 173 CD1 LEU 26 -47.141 -23.179 36.326 1.00 0.00 C ATOM 174 CD2 LEU 26 -44.943 -24.055 35.508 1.00 0.00 C ATOM 186 N GLY 27 -44.954 -27.679 38.748 1.00 0.00 N ATOM 187 CA GLY 27 -44.961 -28.594 39.882 1.00 0.00 C ATOM 188 C GLY 27 -43.721 -28.407 40.747 1.00 0.00 C ATOM 189 O GLY 27 -43.029 -27.393 40.648 1.00 0.00 O ATOM 191 HA2 GLY 27 -45.846 -28.405 40.488 1.00 0.00 H ATOM 192 HA3 GLY 27 -44.985 -29.619 39.515 1.00 0.00 H ATOM 193 N ALA 28 -43.442 -29.392 41.594 1.00 0.00 N ATOM 194 CA ALA 28 -42.259 -29.360 42.445 1.00 0.00 C ATOM 195 C ALA 28 -40.988 -29.220 41.617 1.00 0.00 C ATOM 196 O ALA 28 -40.682 -30.072 40.784 1.00 0.00 O ATOM 197 CB ALA 28 -42.195 -30.608 43.312 1.00 0.00 C ATOM 203 N ILE 29 -40.252 -28.138 41.851 1.00 0.00 N ATOM 204 CA ILE 29 -39.076 -27.824 41.047 1.00 0.00 C ATOM 205 C ILE 29 -39.459 -27.523 39.605 1.00 0.00 C ATOM 206 O ILE 29 -40.410 -28.095 39.072 1.00 0.00 O ATOM 207 CB ILE 29 -38.054 -28.976 41.068 1.00 0.00 C ATOM 208 CG1 ILE 29 -37.628 -29.286 42.505 1.00 0.00 C ATOM 209 CG2 ILE 29 -36.844 -28.628 40.213 1.00 0.00 C ATOM 210 CD1 ILE 29 -36.841 -30.570 42.645 1.00 0.00 C ATOM 222 N TYR 30 -38.713 -26.620 38.976 1.00 0.00 N ATOM 223 CA TYR 30 -39.100 -26.074 37.681 1.00 0.00 C ATOM 224 C TYR 30 -40.546 -25.591 37.697 1.00 0.00 C ATOM 225 O TYR 30 -41.332 -25.929 36.813 1.00 0.00 O ATOM 226 CB TYR 30 -38.907 -27.119 36.581 1.00 0.00 C ATOM 227 CG TYR 30 -37.459 -27.403 36.251 1.00 0.00 C ATOM 228 CD1 TYR 30 -36.855 -28.584 36.655 1.00 0.00 C ATOM 229 CD2 TYR 30 -36.700 -26.490 35.535 1.00 0.00 C ATOM 230 CE1 TYR 30 -35.532 -28.849 36.358 1.00 0.00 C ATOM 231 CE2 TYR 30 -35.376 -26.742 35.232 1.00 0.00 C ATOM 232 CZ TYR 30 -34.796 -27.924 35.645 1.00 0.00 C ATOM 233 OH TYR 30 -33.478 -28.182 35.345 1.00 0.00 H ATOM 243 N ASP 31 -40.888 -24.800 38.708 1.00 0.00 N ATOM 244 CA ASP 31 -42.274 -24.408 38.938 1.00 0.00 C ATOM 245 C ASP 31 -42.603 -23.100 38.228 1.00 0.00 C ATOM 246 O ASP 31 -41.885 -22.681 37.320 1.00 0.00 O ATOM 247 CB ASP 31 -42.553 -24.276 40.437 1.00 0.00 C ATOM 248 CG ASP 31 -41.803 -23.139 41.119 1.00 0.00 C ATOM 249 OD1 ASP 31 -41.267 -22.307 40.425 1.00 0.00 O ATOM 250 OD2 ASP 31 -41.902 -23.022 42.317 1.00 0.00 O ATOM 255 N LYS 32 -43.688 -22.463 38.647 1.00 0.00 N ATOM 256 CA LYS 32 -44.185 -21.269 37.972 1.00 0.00 C ATOM 257 C LYS 32 -43.099 -20.206 37.863 1.00 0.00 C ATOM 258 O LYS 32 -43.090 -19.409 36.924 1.00 0.00 O ATOM 259 CB LYS 32 -45.401 -20.705 38.708 1.00 0.00 C ATOM 260 CG LYS 32 -46.031 -19.488 38.041 1.00 0.00 C ATOM 261 CD LYS 32 -47.283 -19.038 38.780 1.00 0.00 C ATOM 262 CE LYS 32 -47.927 -17.841 38.098 1.00 0.00 C ATOM 263 NZ LYS 32 -49.145 -17.379 38.819 1.00 0.00 N ATOM 277 N THR 33 -42.186 -20.199 38.828 1.00 0.00 N ATOM 278 CA THR 33 -41.118 -19.209 38.865 1.00 0.00 C ATOM 279 C THR 33 -40.437 -19.081 37.507 1.00 0.00 C ATOM 280 O THR 33 -40.099 -17.979 37.073 1.00 0.00 O ATOM 281 CB THR 33 -40.059 -19.558 39.927 1.00 0.00 C ATOM 282 OG1 THR 33 -40.683 -19.652 41.215 1.00 0.00 O ATOM 283 CG2 THR 33 -38.974 -18.493 39.971 1.00 0.00 C ATOM 291 N LYS 34 -40.240 -20.212 36.842 1.00 0.00 N ATOM 292 CA LYS 34 -39.522 -20.239 35.574 1.00 0.00 C ATOM 293 C LYS 34 -40.474 -20.055 34.397 1.00 0.00 C ATOM 294 O LYS 34 -41.634 -20.459 34.457 1.00 0.00 O ATOM 295 CB LYS 34 -38.750 -21.550 35.423 1.00 0.00 C ATOM 296 CG LYS 34 -37.649 -21.754 36.456 1.00 0.00 C ATOM 297 CD LYS 34 -36.979 -23.110 36.291 1.00 0.00 C ATOM 298 CE LYS 34 -35.924 -23.342 37.362 1.00 0.00 C ATOM 299 NZ LYS 34 -36.516 -23.377 38.727 1.00 0.00 N ATOM 313 N LYS 35 -39.975 -19.441 33.331 1.00 0.00 N ATOM 314 CA LYS 35 -40.812 -19.083 32.191 1.00 0.00 C ATOM 315 C LYS 35 -41.310 -20.324 31.463 1.00 0.00 C ATOM 316 O LYS 35 -40.537 -21.025 30.810 1.00 0.00 O ATOM 317 CB LYS 35 -40.044 -18.179 31.225 1.00 0.00 C ATOM 318 CG LYS 35 -39.552 -16.876 31.840 1.00 0.00 C ATOM 319 CD LYS 35 -40.709 -15.937 32.148 1.00 0.00 C ATOM 320 CE LYS 35 -40.215 -14.618 32.723 1.00 0.00 C ATOM 321 NZ LYS 35 -41.324 -13.643 32.911 1.00 0.00 N ATOM 335 N TYR 36 -42.607 -20.590 31.576 1.00 0.00 N ATOM 336 CA TYR 36 -43.236 -21.670 30.825 1.00 0.00 C ATOM 337 C TYR 36 -44.484 -21.183 30.101 1.00 0.00 C ATOM 338 O TYR 36 -45.607 -21.465 30.519 1.00 0.00 O ATOM 339 CB TYR 36 -43.588 -22.833 31.754 1.00 0.00 C ATOM 340 CG TYR 36 -42.391 -23.635 32.216 1.00 0.00 C ATOM 341 CD1 TYR 36 -41.906 -23.509 33.509 1.00 0.00 C ATOM 342 CD2 TYR 36 -41.750 -24.514 31.357 1.00 0.00 C ATOM 343 CE1 TYR 36 -40.812 -24.236 33.937 1.00 0.00 C ATOM 344 CE2 TYR 36 -40.657 -25.248 31.774 1.00 0.00 C ATOM 345 CZ TYR 36 -40.189 -25.106 33.064 1.00 0.00 C ATOM 346 OH TYR 36 -39.101 -25.835 33.484 1.00 0.00 H ATOM 356 N TRP 37 -44.283 -20.449 29.012 1.00 0.00 N ATOM 357 CA TRP 37 -45.391 -19.948 28.209 1.00 0.00 C ATOM 358 C TRP 37 -45.537 -20.740 26.915 1.00 0.00 C ATOM 359 O TRP 37 -44.823 -21.717 26.691 1.00 0.00 O ATOM 360 CB TRP 37 -45.194 -18.464 27.896 1.00 0.00 C ATOM 361 CG TRP 37 -45.052 -17.608 29.118 1.00 0.00 C ATOM 362 CD1 TRP 37 -43.889 -17.245 29.728 1.00 0.00 C ATOM 363 CD2 TRP 37 -46.109 -17.009 29.879 1.00 0.00 C ATOM 364 NE1 TRP 37 -44.154 -16.457 30.822 1.00 0.00 N ATOM 365 CE2 TRP 37 -45.512 -16.297 30.934 1.00 0.00 C ATOM 366 CE3 TRP 37 -47.505 -17.006 29.766 1.00 0.00 C ATOM 367 CZ2 TRP 37 -46.254 -15.594 31.870 1.00 0.00 C ATOM 368 CZ3 TRP 37 -48.249 -16.299 30.703 1.00 0.00 C ATOM 369 CH2 TRP 37 -47.642 -15.613 31.725 1.00 0.00 H ATOM 380 N VAL 38 -46.467 -20.313 26.069 1.00 0.00 N ATOM 381 CA VAL 38 -46.660 -20.937 24.764 1.00 0.00 C ATOM 382 C VAL 38 -46.640 -19.899 23.649 1.00 0.00 C ATOM 383 O VAL 38 -47.530 -19.054 23.560 1.00 0.00 O ATOM 384 CB VAL 38 -47.986 -21.719 24.701 1.00 0.00 C ATOM 385 CG1 VAL 38 -48.174 -22.338 23.325 1.00 0.00 C ATOM 386 CG2 VAL 38 -48.022 -22.792 25.777 1.00 0.00 C ATOM 396 N TYR 39 -45.619 -19.969 22.801 1.00 0.00 N ATOM 397 CA TYR 39 -45.562 -19.140 21.603 1.00 0.00 C ATOM 398 C TYR 39 -46.113 -19.882 20.393 1.00 0.00 C ATOM 399 O TYR 39 -46.076 -21.112 20.336 1.00 0.00 O ATOM 400 CB TYR 39 -44.124 -18.691 21.332 1.00 0.00 C ATOM 401 CG TYR 39 -43.951 -17.942 20.029 1.00 0.00 C ATOM 402 CD1 TYR 39 -44.363 -16.623 19.904 1.00 0.00 C ATOM 403 CD2 TYR 39 -43.373 -18.556 18.928 1.00 0.00 C ATOM 404 CE1 TYR 39 -44.207 -15.935 18.717 1.00 0.00 C ATOM 405 CE2 TYR 39 -43.212 -17.877 17.736 1.00 0.00 C ATOM 406 CZ TYR 39 -43.630 -16.567 17.634 1.00 0.00 C ATOM 407 OH TYR 39 -43.471 -15.886 16.449 1.00 0.00 H ATOM 417 N GLN 40 -46.626 -19.128 19.426 1.00 0.00 N ATOM 418 CA GLN 40 -47.242 -19.715 18.241 1.00 0.00 C ATOM 419 C GLN 40 -46.249 -20.581 17.476 1.00 0.00 C ATOM 420 O GLN 40 -45.359 -20.069 16.795 1.00 0.00 O ATOM 421 CB GLN 40 -47.787 -18.618 17.321 1.00 0.00 C ATOM 422 CG GLN 40 -48.579 -19.139 16.135 1.00 0.00 C ATOM 423 CD GLN 40 -49.197 -18.021 15.316 1.00 0.00 C ATOM 424 OE1 GLN 40 -48.980 -16.838 15.593 1.00 0.00 O ATOM 425 NE2 GLN 40 -49.973 -18.390 14.304 1.00 0.00 N ATOM 434 N GLY 41 -46.405 -21.896 17.593 1.00 0.00 N ATOM 435 CA GLY 41 -45.612 -22.834 16.809 1.00 0.00 C ATOM 436 C GLY 41 -44.372 -23.280 17.576 1.00 0.00 C ATOM 437 O GLY 41 -43.527 -24.000 17.042 1.00 0.00 O ATOM 439 HA2 GLY 41 -46.220 -23.709 16.577 1.00 0.00 H ATOM 440 HA3 GLY 41 -45.302 -22.352 15.883 1.00 0.00 H ATOM 441 N LYS 42 -44.268 -22.847 18.826 1.00 0.00 N ATOM 442 CA LYS 42 -43.139 -23.212 19.673 1.00 0.00 C ATOM 443 C LYS 42 -43.424 -22.900 21.136 1.00 0.00 C ATOM 444 O LYS 42 -43.732 -21.761 21.490 1.00 0.00 O ATOM 445 CB LYS 42 -41.873 -22.485 19.218 1.00 0.00 C ATOM 446 CG LYS 42 -40.619 -22.858 19.999 1.00 0.00 C ATOM 447 CD LYS 42 -39.376 -22.237 19.381 1.00 0.00 C ATOM 448 CE LYS 42 -38.117 -22.655 20.125 1.00 0.00 C ATOM 449 NZ LYS 42 -36.892 -22.060 19.526 1.00 0.00 N ATOM 463 N PRO 43 -43.319 -23.918 21.984 1.00 0.00 N ATOM 464 CA PRO 43 -43.483 -23.737 23.422 1.00 0.00 C ATOM 465 C PRO 43 -42.285 -23.016 24.027 1.00 0.00 C ATOM 466 O PRO 43 -41.188 -23.042 23.471 1.00 0.00 O ATOM 467 CB PRO 43 -43.633 -25.163 23.964 1.00 0.00 C ATOM 468 CG PRO 43 -42.852 -26.005 23.013 1.00 0.00 C ATOM 469 CD PRO 43 -43.042 -25.363 21.664 1.00 0.00 C ATOM 477 N VAL 44 -42.503 -22.374 25.169 1.00 0.00 N ATOM 478 CA VAL 44 -41.449 -21.619 25.836 1.00 0.00 C ATOM 479 C VAL 44 -40.996 -22.315 27.112 1.00 0.00 C ATOM 480 O VAL 44 -41.816 -22.733 27.927 1.00 0.00 O ATOM 481 CB VAL 44 -41.908 -20.189 26.178 1.00 0.00 C ATOM 482 CG1 VAL 44 -40.811 -19.440 26.920 1.00 0.00 C ATOM 483 CG2 VAL 44 -42.302 -19.440 24.914 1.00 0.00 C ATOM 493 N MET 45 -39.682 -22.436 27.279 1.00 0.00 N ATOM 494 CA MET 45 -39.117 -23.100 28.448 1.00 0.00 C ATOM 495 C MET 45 -37.623 -22.828 28.566 1.00 0.00 C ATOM 496 O MET 45 -36.920 -22.719 27.561 1.00 0.00 O ATOM 497 CB MET 45 -39.376 -24.604 28.377 1.00 0.00 C ATOM 498 CG MET 45 -38.684 -25.309 27.219 1.00 0.00 C ATOM 499 SD MET 45 -39.354 -26.954 26.905 1.00 0.00 S ATOM 500 CE MET 45 -40.871 -26.544 26.046 1.00 0.00 C ATOM 510 N PRO 46 -37.143 -22.721 29.801 1.00 0.00 N ATOM 511 CA PRO 46 -35.727 -22.476 30.053 1.00 0.00 C ATOM 512 C PRO 46 -34.871 -23.633 29.556 1.00 0.00 C ATOM 513 O PRO 46 -33.687 -23.460 29.263 1.00 0.00 O ATOM 514 CB PRO 46 -35.643 -22.308 31.574 1.00 0.00 C ATOM 515 CG PRO 46 -36.855 -23.003 32.092 1.00 0.00 C ATOM 516 CD PRO 46 -37.922 -22.770 31.057 1.00 0.00 C TER END ########################## # # # ACE results: # # # ########################## WARNING!!! Different chains are predicted. Only first chain will be considered. Number of atoms possible to evaluate: 0 ERROR! The set of atoms possible to evaluate is empty-> END of the results output